| Clone Name | FLbaf42e06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY953127.1| Zea mays pathogenesis-related protein 10 gene, complete cds Length = 713 Score = 246 bits (124), Expect = 1e-61 Identities = 256/300 (85%) Strand = Plus / Plus Query: 318 ttgcagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaat 377 |||||| |||||| |||| | ||||||||||||| ||||||||| | |||| || || | Sbjct: 337 ttgcagtcatgccgttcagcttcatgaaggagaggctcgagttcctggacgcggacaagt 396 Query: 378 gcgagtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggcta 437 ||||||||||| ||| |||||||||||||||||||||||| ||| ||||| ||||| | Sbjct: 397 gcgagtgcaagaacacgctcatcgagggcggcggcatcggcgtcgccatcgaaacggcga 456 Query: 438 cgtcgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcga 497 |||||||||||||||||||||| ||||| |||||| ||||| || ||||| |||| | Sbjct: 457 cgtcgcacatcaaggtggagcccgcggccggcggcgggagcgtggtgaaggtcgaatcca 516 Query: 498 catacaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctg 557 | ||||||||| ||||||||||||||||||| || |||||| |||| ||||||||||| | Sbjct: 517 cttacaagctgctgccgggcgtggaggtgaaggacgagatcgccaaggccaaggagtccg 576 Query: 558 tcaccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaact 617 ||||||| |||||||||| | ||||||| |||||| |||||||| ||||||||||||| Sbjct: 577 tcaccgccatcttcaagggtgccgaggcctacctcgtcgccaaccccgacgcctacaact 636 Score = 117 bits (59), Expect = 7e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 66 aatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcct 125 |||||| ||| ||||||||||||||| |||||||| |||||||| || | | |||||| Sbjct: 62 aatggcctccgccaacagctggaccctcgagatcgcgtcgccggtggctccgcagcgcct 121 Query: 126 cttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcgt 185 ||||| |||| ||| |||||||||||||| ||||| || ||| |||| | ||| |||| Sbjct: 122 gttccgcgccgccgtgatggactggcacaccctggcgcccaaggtcgcctcccacgtcgt 181 Query: 186 cgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaactt 245 |||||| || || || || |||||||| |||||| | ||||| ||||||||||| ||||| Sbjct: 182 cgccagcgcgcagcccgtggagggcgacggcggcgttggcagcgtcaggcagttcaactt 241 Query: 246 caccgcaggta 256 |||| |||||| Sbjct: 242 cacctcaggta 252
>emb|CT833958.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN069J19, full insert sequence Length = 1001 Score = 230 bits (116), Expect = 7e-57 Identities = 257/304 (84%) Strand = Plus / Plus Query: 319 tgcagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaatg 378 |||||||||||| |||| || |||||||||||| || |||||| | ||||| || || || Sbjct: 437 tgcagccatgccattcagccacatgaaggagaggctggagttcctggacgtggacaagtg 496 Query: 379 cgagtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggctac 438 |||||||||||| || || | ||||||||||||||||||| |||||||||||||| || Sbjct: 497 cgagtgcaagtcgacgctggtggagggcggcggcatcggcaaggcgatcgagacggcgac 556 Query: 439 gtcgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcgac 498 |||||||||||||||||||||| |||| |||||||| |||||||| |||||| | || || Sbjct: 557 gtcgcacatcaaggtggagccggcggcgaacggcgggagcgtcgtgaaggtggagtccac 616 Query: 499 atacaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctgt 558 |||||||| | || || ||||||||||| || ||||||||||| || |||||||| | Sbjct: 617 gtacaagctcctccccggagtggaggtgaaggacgagatcaccaaggctaaggagtccct 676 Query: 559 caccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaactg 618 ||||| ||||||||| ||| ||||||| |||| | |||||||||||||| ||||||| Sbjct: 677 caccggcatcttcaagaccgccgaggcctacctcatcgccaacccggacgcttacaacta 736 Query: 619 aatc 622 |||| Sbjct: 737 aatc 740 Score = 174 bits (88), Expect = 3e-40 Identities = 166/192 (86%) Strand = Plus / Plus Query: 65 caatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcc 124 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 87 caatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgcc 146 Query: 125 tcttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcg 184 | ||||| |||| |||||||||||||||||| || ||||| ||| |||| | ||||||| Sbjct: 147 tgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatcg 206 Query: 185 tcgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaact 244 ||||||| ||||| || || || ||||| ||| || | ||||| ||||||||||| |||| Sbjct: 207 tcgccagcgcccaccccgtcgacggcgacggcagcgtcggcagcgtcaggcagttcaact 266 Query: 245 tcaccgcaggta 256 ||||| |||||| Sbjct: 267 tcacctcaggta 278
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 230 bits (116), Expect = 7e-57 Identities = 257/304 (84%) Strand = Plus / Plus Query: 319 tgcagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaatg 378 |||||||||||| |||| || |||||||||||| || |||||| | ||||| || || || Sbjct: 90472 tgcagccatgccattcagccacatgaaggagaggctggagttcctggacgtggacaagtg 90531 Query: 379 cgagtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggctac 438 |||||||||||| || || | ||||||||||||||||||| |||||||||||||| || Sbjct: 90532 cgagtgcaagtcgacgctggtggagggcggcggcatcggcaaggcgatcgagacggcgac 90591 Query: 439 gtcgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcgac 498 |||||||||||||||||||||| |||| |||||||| |||||||| |||||| | || || Sbjct: 90592 gtcgcacatcaaggtggagccggcggcgaacggcgggagcgtcgtgaaggtggagtccac 90651 Query: 499 atacaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctgt 558 |||||||| | || || ||||||||||| || ||||||||||| || |||||||| | Sbjct: 90652 gtacaagctcctccccggagtggaggtgaaggacgagatcaccaaggctaaggagtccct 90711 Query: 559 caccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaactg 618 ||||| ||||||||| ||| ||||||| |||| | |||||||||||||| ||||||| Sbjct: 90712 caccggcatcttcaagaccgccgaggcctacctcatcgccaacccggacgcttacaacta 90771 Query: 619 aatc 622 |||| Sbjct: 90772 aatc 90775 Score = 174 bits (88), Expect = 3e-40 Identities = 166/192 (86%) Strand = Plus / Plus Query: 65 caatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcc 124 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 90120 caatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgcc 90179 Query: 125 tcttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcg 184 | ||||| |||| |||||||||||||||||| || ||||| ||| |||| | ||||||| Sbjct: 90180 tgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatcg 90239 Query: 185 tcgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaact 244 ||||||| ||||| || || || ||||| ||| || | ||||| ||||||||||| |||| Sbjct: 90240 tcgccagcgcccaccccgtcgacggcgacggcagcgtcggcagcgtcaggcagttcaact 90299 Query: 245 tcaccgcaggta 256 ||||| |||||| Sbjct: 90300 tcacctcaggta 90311
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 230 bits (116), Expect = 7e-57 Identities = 257/304 (84%) Strand = Plus / Plus Query: 319 tgcagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaatg 378 |||||||||||| |||| || |||||||||||| || |||||| | ||||| || || || Sbjct: 10532760 tgcagccatgccattcagccacatgaaggagaggctggagttcctggacgtggacaagtg 10532819 Query: 379 cgagtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggctac 438 |||||||||||| || || | ||||||||||||||||||| |||||||||||||| || Sbjct: 10532820 cgagtgcaagtcgacgctggtggagggcggcggcatcggcaaggcgatcgagacggcgac 10532879 Query: 439 gtcgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcgac 498 |||||||||||||||||||||| |||| |||||||| |||||||| |||||| | || || Sbjct: 10532880 gtcgcacatcaaggtggagccggcggcgaacggcgggagcgtcgtgaaggtggagtccac 10532939 Query: 499 atacaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctgt 558 |||||||| | || || ||||||||||| || ||||||||||| || |||||||| | Sbjct: 10532940 gtacaagctcctccccggagtggaggtgaaggacgagatcaccaaggctaaggagtccct 10532999 Query: 559 caccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaactg 618 ||||| ||||||||| ||| ||||||| |||| | |||||||||||||| ||||||| Sbjct: 10533000 caccggcatcttcaagaccgccgaggcctacctcatcgccaacccggacgcttacaacta 10533059 Query: 619 aatc 622 |||| Sbjct: 10533060 aatc 10533063 Score = 174 bits (88), Expect = 3e-40 Identities = 166/192 (86%) Strand = Plus / Plus Query: 65 caatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcc 124 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 10532408 caatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgcc 10532467 Query: 125 tcttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcg 184 | ||||| |||| |||||||||||||||||| || ||||| ||| |||| | ||||||| Sbjct: 10532468 tgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatcg 10532527 Query: 185 tcgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaact 244 ||||||| ||||| || || || ||||| ||| || | ||||| ||||||||||| |||| Sbjct: 10532528 tcgccagcgcccaccccgtcgacggcgacggcagcgtcggcagcgtcaggcagttcaact 10532587 Query: 245 tcaccgcaggta 256 ||||| |||||| Sbjct: 10532588 tcacctcaggta 10532599
>emb|CT833957.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA057K07, full insert sequence Length = 822 Score = 226 bits (114), Expect = 1e-55 Identities = 255/302 (84%) Strand = Plus / Plus Query: 321 cagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaatgcg 380 |||||||||| |||| || |||||||||||| || |||||| | ||||| || || |||| Sbjct: 276 cagccatgccattcagccacatgaaggagaggctggagttcctggacgtggacaagtgcg 335 Query: 381 agtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggctacgt 440 |||||||||| || || | ||||||||||||||||||| |||||||||||||| |||| Sbjct: 336 agtgcaagtcgacgctggtggagggcggcggcatcggcaaggcgatcgagacggcgacgt 395 Query: 441 cgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcgacat 500 |||||||||||||||||||| |||| |||||||| |||||||| |||||| | || || | Sbjct: 396 cgcacatcaaggtggagccggcggcgaacggcgggagcgtcgtgaaggtggagtccacgt 455 Query: 501 acaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctgtca 560 ||||||| | || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 456 acaagctcctccccggagtggaggtgaaggacgagatcaccaaggctaaggagtccctca 515 Query: 561 ccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaactgaa 620 ||| ||||||||| ||| ||||||| |||| | |||||||||||||| ||||||| || Sbjct: 516 ccggcatcttcaagaccgccgaggcctacctcatcgccaacccggacgcttacaactaaa 575 Query: 621 tc 622 || Sbjct: 576 tc 577 Score = 168 bits (85), Expect = 2e-38 Identities = 160/185 (86%) Strand = Plus / Plus Query: 65 caatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcc 124 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 90 caatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgcc 149 Query: 125 tcttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcg 184 | ||||| |||| |||||||||||||||||| || ||||| ||| |||| | ||||||| Sbjct: 150 tgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatcg 209 Query: 185 tcgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaact 244 ||||||| ||||| || || || ||||| ||| || | ||||| ||||||||||| |||| Sbjct: 210 tcgccagcgcccaccccgtcgacggcgacggcagcgtcggcagcgtcaggcagttcaact 269 Query: 245 tcacc 249 ||||| Sbjct: 270 tcacc 274
>ref|NM_001056392.1| Oryza sativa (japonica cultivar-group) Os03g0300400 (Os03g0300400) mRNA, complete cds Length = 879 Score = 226 bits (114), Expect = 1e-55 Identities = 255/302 (84%) Strand = Plus / Plus Query: 321 cagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaatgcg 380 |||||||||| |||| || |||||||||||| || |||||| | ||||| || || |||| Sbjct: 278 cagccatgccattcagccacatgaaggagaggctggagttcctggacgtggacaagtgcg 337 Query: 381 agtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggctacgt 440 |||||||||| || || | ||||||||||||||||||| |||||||||||||| |||| Sbjct: 338 agtgcaagtcgacgctggtggagggcggcggcatcggcaaggcgatcgagacggcgacgt 397 Query: 441 cgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcgacat 500 |||||||||||||||||||| |||| |||||||| |||||||| |||||| | || || | Sbjct: 398 cgcacatcaaggtggagccggcggcgaacggcgggagcgtcgtgaaggtggagtccacgt 457 Query: 501 acaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctgtca 560 ||||||| | || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 458 acaagctcctccccggagtggaggtgaaggacgagatcaccaaggctaaggagtccctca 517 Query: 561 ccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaactgaa 620 ||| ||||||||| ||| ||||||| |||| | |||||||||||||| ||||||| || Sbjct: 518 ccggcatcttcaagaccgccgaggcctacctcatcgccaacccggacgcttacaactaaa 577 Query: 621 tc 622 || Sbjct: 578 tc 579 Score = 168 bits (85), Expect = 2e-38 Identities = 160/185 (86%) Strand = Plus / Plus Query: 65 caatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcc 124 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 92 caatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgcc 151 Query: 125 tcttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcg 184 | ||||| |||| |||||||||||||||||| || ||||| ||| |||| | ||||||| Sbjct: 152 tgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatcg 211 Query: 185 tcgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaact 244 ||||||| ||||| || || || ||||| ||| || | ||||| ||||||||||| |||| Sbjct: 212 tcgccagcgcccaccccgtcgacggcgacggcagcgtcggcagcgtcaggcagttcaact 271 Query: 245 tcacc 249 ||||| Sbjct: 272 tcacc 276
>gb|AF395880.1| Oryza sativa JIOsPR10 mRNA, complete cds Length = 822 Score = 226 bits (114), Expect = 1e-55 Identities = 255/302 (84%) Strand = Plus / Plus Query: 321 cagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaatgcg 380 |||||||||| |||| || |||||||||||| || |||||| | ||||| || || |||| Sbjct: 245 cagccatgccattcagccacatgaaggagaggctggagttcctggacgtggacaagtgcg 304 Query: 381 agtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggctacgt 440 |||||||||| || || | ||||||||||||||||||| |||||||||||||| |||| Sbjct: 305 agtgcaagtcgacgctggtggagggcggcggcatcggcaaggcgatcgagacggcgacgt 364 Query: 441 cgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcgacat 500 |||||||||||||||||||| |||| |||||||| |||||||| |||||| | || || | Sbjct: 365 cgcacatcaaggtggagccggcggcgaacggcgggagcgtcgtgaaggtggagtccacgt 424 Query: 501 acaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctgtca 560 ||||||| | || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 425 acaagctcctccccggagtggaggtgaaggacgagatcaccaaggctaaggagtccctca 484 Query: 561 ccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaactgaa 620 ||| ||||||||| ||| ||||||| |||| | |||||||||||||| ||||||| || Sbjct: 485 ccggcatcttcaagaccgccgaggcctacctcatcgccaacccggacgcttacaactaaa 544 Query: 621 tc 622 || Sbjct: 545 tc 546 Score = 168 bits (85), Expect = 2e-38 Identities = 160/185 (86%) Strand = Plus / Plus Query: 65 caatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcc 124 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 59 caatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgcc 118 Query: 125 tcttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcg 184 | ||||| |||| |||||||||||||||||| || ||||| ||| |||| | ||||||| Sbjct: 119 tgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatcg 178 Query: 185 tcgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaact 244 ||||||| ||||| || || || ||||| ||| || | ||||| ||||||||||| |||| Sbjct: 179 tcgccagcgcccaccccgtcgacggcgacggcagcgtcggcagcgtcaggcagttcaact 238 Query: 245 tcacc 249 ||||| Sbjct: 239 tcacc 243
>gb|AF416604.1|AF416604 Oryza sativa pathogen-related protein gene, complete cds Length = 848 Score = 226 bits (114), Expect = 1e-55 Identities = 255/302 (84%) Strand = Plus / Plus Query: 321 cagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaatgcg 380 |||||||||| |||| || |||||||||||| || |||||| | ||||| || || |||| Sbjct: 258 cagccatgccattcagccacatgaaggagaggctggagttcctggacgtggacaagtgcg 317 Query: 381 agtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggctacgt 440 |||||||||| || || | ||||||||||||||||||| |||||||||||||| |||| Sbjct: 318 agtgcaagtcgacgctggtggagggcggcggcatcggcaaggcgatcgagacggcgacgt 377 Query: 441 cgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcgacat 500 |||||||||||||||||||| |||| |||||||| |||||||| |||||| | || || | Sbjct: 378 cgcacatcaaggtggagccggcggcgaacggcgggagcgtcgtgaaggtggagtccacgt 437 Query: 501 acaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctgtca 560 ||||||| | || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 438 acaagctcctccccggagtggaggtgaaggacgagatcaccaaggctaaggagtccctca 497 Query: 561 ccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaactgaa 620 ||| ||||||||| ||| ||||||| |||| | |||||||||||||| ||||||| || Sbjct: 498 ccggcatcttcaagaccgccgaggcctacctcatcgccaacccggacgcttacaactaaa 557 Query: 621 tc 622 || Sbjct: 558 tc 559 Score = 168 bits (85), Expect = 2e-38 Identities = 160/185 (86%) Strand = Plus / Plus Query: 65 caatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcc 124 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 72 caatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgcc 131 Query: 125 tcttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcg 184 | ||||| |||| |||||||||||||||||| || ||||| ||| |||| | ||||||| Sbjct: 132 tgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatcg 191 Query: 185 tcgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaact 244 ||||||| ||||| || || || ||||| ||| || | ||||| ||||||||||| |||| Sbjct: 192 tcgccagcgcccaccccgtcgacggcgacggcagcgtcggcagcgtcaggcagttcaact 251 Query: 245 tcacc 249 ||||| Sbjct: 252 tcacc 256
>dbj|AK121376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127E15, full insert sequence Length = 882 Score = 226 bits (114), Expect = 1e-55 Identities = 255/302 (84%) Strand = Plus / Plus Query: 321 cagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaatgcg 380 |||||||||| |||| || |||||||||||| || |||||| | ||||| || || |||| Sbjct: 279 cagccatgccattcagccacatgaaggagaggctggagttcctggacgtggacaagtgcg 338 Query: 381 agtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggctacgt 440 |||||||||| || || | ||||||||||||||||||| |||||||||||||| |||| Sbjct: 339 agtgcaagtcgacgctggtggagggcggcggcatcggcaaggcgatcgagacggcgacgt 398 Query: 441 cgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcgacat 500 |||||||||||||||||||| |||| |||||||| |||||||| |||||| | || || | Sbjct: 399 cgcacatcaaggtggagccggcggcgaacggcgggagcgtcgtgaaggtggagtccacgt 458 Query: 501 acaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctgtca 560 ||||||| | || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 459 acaagctcctccccggagtggaggtgaaggacgagatcaccaaggctaaggagtccctca 518 Query: 561 ccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaactgaa 620 ||| ||||||||| ||| ||||||| |||| | |||||||||||||| ||||||| || Sbjct: 519 ccggcatcttcaagaccgccgaggcctacctcatcgccaacccggacgcttacaactaaa 578 Query: 621 tc 622 || Sbjct: 579 tc 580 Score = 168 bits (85), Expect = 2e-38 Identities = 160/185 (86%) Strand = Plus / Plus Query: 65 caatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcc 124 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 93 caatggcatccaccaacagctggacccacgagatcgagtcgccggtggccgcgccgcgcc 152 Query: 125 tcttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcg 184 | ||||| |||| |||||||||||||||||| || ||||| ||| |||| | ||||||| Sbjct: 153 tgttccgcgccgccgtcatggactggcacacccttgcccccaagatcgcctcccacatcg 212 Query: 185 tcgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaact 244 ||||||| ||||| || || || ||||| ||| || | ||||| ||||||||||| |||| Sbjct: 213 tcgccagcgcccaccccgtcgacggcgacggcagcgtcggcagcgtcaggcagttcaact 272 Query: 245 tcacc 249 ||||| Sbjct: 273 tcacc 277
>gb|DQ245533.1| Zea mays clone 16792 mRNA sequence Length = 737 Score = 224 bits (113), Expect = 4e-55 Identities = 248/293 (84%) Strand = Plus / Plus Query: 325 catgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaatgcgagtg 384 |||||| |||| | ||||||||||| | ||||||||| |||||| || || |||||||| Sbjct: 277 catgccgttcagcttcatgaaggagcgtctcgagttcctcgacgcggacaagtgcgagtg 336 Query: 385 caagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggctacgtcgca 444 |||| ||| |||||||||||||||||||||||| ||| ||||| ||||| |||||||| Sbjct: 337 caagaacacgctcatcgagggcggcggcatcggcgtcgccatcgaaacggcgacgtcgca 396 Query: 445 catcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcgacatacaa 504 ||||||||||||||| ||||| |||||| || || || ||||| | || || ||||| Sbjct: 397 catcaaggtggagcccgcggccggcggcgggagtgtggtgaaggtcgagtccacgtacaa 456 Query: 505 gctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctgtcaccgc 564 |||| ||||||||||||||||||| || |||||| |||| ||||||||||| |||||||| Sbjct: 457 gctgctgccgggcgtggaggtgaaggacgagatcgccaaggccaaggagtccgtcaccgc 516 Query: 565 gatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaact 617 |||||||||| | ||||||| |||||| |||||||| ||||||||||||| Sbjct: 517 catcttcaagggtgccgaggcctacctcgtcgccaaccccgacgcctacaact 569 Score = 119 bits (60), Expect = 2e-23 Identities = 153/184 (83%) Strand = Plus / Plus Query: 66 aatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcct 125 |||||| ||| ||||||||||||||| |||||||| |||||||| ||| | | |||||| Sbjct: 88 aatggcctccgccaacagctggaccctcgagatcgcgtcgccggtggccccgcagcgcct 147 Query: 126 cttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcgt 185 ||||| |||| ||| |||||||||||||| ||||| || ||| |||| | ||| |||| Sbjct: 148 gttccgcgccgccgtgatggactggcacaccctggcgcccaaggtcgcctcccacgtcgt 207 Query: 186 cgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaactt 245 |||||| || || || || |||||||| |||||| | ||||| ||||||||||| ||||| Sbjct: 208 cgccagcgcgcagcccgtggagggcgacggcggcgttggcagcgtcaggcagttcaactt 267 Query: 246 cacc 249 |||| Sbjct: 268 cacc 271
>gb|AY103811.1| Zea mays PCO091453 mRNA sequence Length = 1087 Score = 216 bits (109), Expect = 1e-52 Identities = 247/293 (84%) Strand = Plus / Plus Query: 325 catgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaatgcgagtg 384 |||||| |||| | ||||||||||| | ||||||||| | |||| || || |||||||| Sbjct: 469 catgccgttcagcttcatgaaggagcgtctcgagttcctggacgcggacaagtgcgagtg 528 Query: 385 caagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggctacgtcgca 444 |||| ||| |||||||||||||||||||||||| ||| ||||| ||||| |||||||| Sbjct: 529 caagaacacgctcatcgagggcggcggcatcggcgtcgccatcgaaacggcgacgtcgca 588 Query: 445 catcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcgacatacaa 504 ||||||||||||||| ||||| |||||| || || || ||||| | || || ||||| Sbjct: 589 catcaaggtggagcccgcggccggcggcgggagtgtggtgaaggtcgagtccacttacaa 648 Query: 505 gctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctgtcaccgc 564 |||| ||||||||||||||||||| || |||||| |||| ||||||||||| |||||||| Sbjct: 649 gctgctgccgggcgtggaggtgaaggacgagatcgccaaggccaaggagtccgtcaccgc 708 Query: 565 gatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaact 617 |||||||||| | ||||||| |||||| |||||||| ||||||||||||| Sbjct: 709 catcttcaagggtgccgaggcctacctcgtcgccaaccccgacgcctacaact 761 Score = 127 bits (64), Expect = 7e-26 Identities = 154/184 (83%) Strand = Plus / Plus Query: 66 aatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcct 125 |||||| ||| ||||||||||||||| |||||||| |||||||| ||| ||| |||||| Sbjct: 280 aatggcctccgccaacagctggaccctcgagatcgcgtcgccggtggccccacagcgcct 339 Query: 126 cttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcgt 185 ||||| |||| ||| |||||||||||||| ||||| || ||| |||| | ||| |||| Sbjct: 340 gttccgcgccgccgtgatggactggcacaccctggcgcccaaggtcgcctcccacgtcgt 399 Query: 186 cgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaactt 245 |||||| || || || || |||||||| |||||| | ||||| ||||||||||| ||||| Sbjct: 400 cgccagcgcgcagcccgtggagggcgacggcggcgttggcagcgtcaggcagttcaactt 459 Query: 246 cacc 249 |||| Sbjct: 460 cacc 463
>gb|AY751554.1| Sorghum bicolor pathogenesis-related protein 10b (PR10) gene, complete cds Length = 2438 Score = 151 bits (76), Expect = 5e-33 Identities = 244/300 (81%) Strand = Plus / Plus Query: 318 ttgcagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaat 377 |||||| |||||| |||| | ||||||||||||| ||||| ||| | ||||| || || | Sbjct: 2137 ttgcagtcatgccgttcagcttcatgaaggagaggctcgatttcctggacgtggacaagt 2196 Query: 378 gcgagtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggcta 437 ||||||||||| ||| ||| ||||||||||| ||||||| ||| |||||||| || Sbjct: 2197 gcgagtgcaagaacacgctcgtcgagggcggcaacatcggcgtcgccatcgagaccgcgg 2256 Query: 438 cgtcgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcga 497 |||||||||||||||||||||| |||| |||||| ||||| || |||||| | |||| Sbjct: 2257 cgtcgcacatcaaggtggagcccgcggcaggcggcggcagcgtggtgaaggtggagtcga 2316 Query: 498 catacaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctg 557 | ||||||||| ||||||| ||||| | ||| || ||| |||| ||||||||| | Sbjct: 2317 cctacaagctgctgccgggtgtggacgcgaaggacgaggaagccaaggccaaggaggcac 2376 Query: 558 tcaccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaact 617 ||||||| || |||||||| | ||||||| |||||| |||||||| ||||||||||||| Sbjct: 2377 tcaccgccattttcaaggctgccgaggcctacctcgtcgccaaccccgacgcctacaact 2436 Score = 121 bits (61), Expect = 4e-24 Identities = 154/185 (83%) Strand = Plus / Plus Query: 65 caatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcc 124 ||||||| ||| ||||||||||||||| ||||||| |||||||| || || ||||||| Sbjct: 1860 caatggcctccgccaacagctggaccctcgagatcccttcgccggtggctgcgccgcgcc 1919 Query: 125 tcttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcg 184 | |||||||||| ||| |||||||||||||| ||||| || ||| || | ||| ||| Sbjct: 1920 tgttccgtgccgccgtgatggactggcacaccctggcacccaaggtcaactcccacgtcg 1979 Query: 185 tcgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaact 244 ||||||| ||||| || || |||||||| |||||| | ||||| ||||||||||| |||| Sbjct: 1980 tcgccagcgcccaccccgtggagggcgacggcggcgttggcagcgtcaggcagttcaact 2039 Query: 245 tcacc 249 ||||| Sbjct: 2040 tcacc 2044
>gb|AY751553.1| Sorghum bicolor pathogenesis-related protein 10d (PR10) gene, complete cds Length = 1617 Score = 143 bits (72), Expect = 1e-30 Identities = 243/300 (81%) Strand = Plus / Plus Query: 318 ttgcagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaat 377 |||||| |||||| |||| | ||||||||||||| ||||| ||| | ||||| || || | Sbjct: 1316 ttgcagtcatgccgttcagcttcatgaaggagaggctcgatttcctggacgtggacaagt 1375 Query: 378 gcgagtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggcta 437 ||||||||||| ||| ||| ||||||||||||||||||| || |||||||| || Sbjct: 1376 gcgagtgcaagaacacgctcgtcgagggcggcggcatcggtgttgccatcgagaccgcgg 1435 Query: 438 cgtcgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcga 497 |||||||||||||||||||||| ||||| |||||| ||||| || |||||| | |||| Sbjct: 1436 cgtcgcacatcaaggtggagcccgcggccggcggcggcagcgtggtgaaggtggagtcga 1495 Query: 498 catacaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctg 557 | ||||||||| |||| ||||| || | ||| || ||| ||| ||||||||| | | Sbjct: 1496 cctacaagctgctgcctggcgtagacgagaaggacgaggaagtcaaggccaaggaggcag 1555 Query: 558 tcaccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaact 617 ||||||| || ||||||| | ||||||| |||||| |||||||| ||||||||||||| Sbjct: 1556 tcaccgccattttcaagggtgccgaggcctacctcgtcgccaaccccgacgcctacaact 1615 Score = 117 bits (59), Expect = 7e-23 Identities = 152/183 (83%) Strand = Plus / Plus Query: 67 atggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcctc 126 ||||| ||| ||| ||||||||||| ||||| ||||||||| ||||| |||||||| Sbjct: 1036 atggcctccgccagcagctggaccctggagattccatcgccggtggccgcgccgcgcctg 1095 Query: 127 ttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcgtc 186 ||||| |||| ||| |||||||||||||| ||||| || ||| |||| | ||| ||||| Sbjct: 1096 ttccgcgccgccgtgatggactggcacaccctggcgcccaaggtcgcctcccacgtcgtc 1155 Query: 187 gccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaacttc 246 ||||| ||||| || || |||||||| |||||| | ||||| ||||||||||| |||||| Sbjct: 1156 gccagcgcccaccccgtggagggcgacggcggcgttggcagcgtcaggcagttcaacttc 1215 Query: 247 acc 249 ||| Sbjct: 1216 acc 1218
>gb|AY751552.1| Sorghum bicolor pathogenesis-related protein 10c (PR10) gene, complete cds Length = 1098 Score = 143 bits (72), Expect = 1e-30 Identities = 243/300 (81%) Strand = Plus / Plus Query: 318 ttgcagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaat 377 |||||| |||||| |||| | |||||||||||| ||||||| | | ||| | || || | Sbjct: 797 ttgcagtcatgccattcagcttcatgaaggagaagctcgagtccctggacatggacaagt 856 Query: 378 gcgagtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggcta 437 ||||||||||||| || ||| ||||||| |||||||||||| || ||||||| || Sbjct: 857 gcgagtgcaagtcgacgctcgtcgagggaggcggcatcggcgtggccgtcgagaccgcgg 916 Query: 438 cgtcgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcga 497 |||||||||||||||||||||| ||||| |||||| ||||| || |||||| | |||| Sbjct: 917 cgtcgcacatcaaggtggagcccgcggccggcggcggcagcgtggtgaaggtggagtcga 976 Query: 498 catacaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctg 557 | ||||||||| ||||||| ||||| ||||| | ||| ||| ||||||||| | | Sbjct: 977 cctacaagctgctgccgggtgtggacgtgaagggcgaggaagtcaaggccaaggaggcag 1036 Query: 558 tcaccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaact 617 ||||||| |||||||||| | ||||||| |||||| |||||||| ||||||||||||| Sbjct: 1037 tcaccgccatcttcaagggtgccgaggcctacctcgtcgccaaccccgacgcctacaact 1096 Score = 105 bits (53), Expect = 3e-19 Identities = 143/173 (82%) Strand = Plus / Plus Query: 77 ccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcctcttccgtgccg 136 ||||||||||||||| ||||||| |||||||| ||||| |||||||| ||||| |||| Sbjct: 537 ccaacagctggaccctcgagatcccgtcgccggtggccgcgccgcgcctgttccgcgccg 596 Query: 137 gcgtcatggactggcacacactggcccctaagctcgcaccacacatcgtcgccagtgccc 196 ||| ||||||||||||| ||||| || ||| |||| | ||| ||||| | || |||| Sbjct: 597 ccgtgatggactggcacaacctggcgcccaaggtcgcctctcacgtcgtcacaagcgccc 656 Query: 197 atcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaacttcacc 249 |||| || |||||||| ||||| | ||||| ||||||||||| ||||||||| Sbjct: 657 atcccgtggagggcgacggcggtgttggcagcgtcaggcagttcaacttcacc 709
>gb|AY751551.1| Sorghum bicolor pathogenesis-related protein 10a (PR10) gene, complete cds Length = 1094 Score = 135 bits (68), Expect = 3e-28 Identities = 242/300 (80%) Strand = Plus / Plus Query: 318 ttgcagccatgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaat 377 |||||| |||||| |||| | ||||||||||||| ||||| ||| | ||||| || || | Sbjct: 793 ttgcagtcatgccgttcagcttcatgaaggagaggctcgatttcctggacgtggacaagt 852 Query: 378 gcgagtgcaagtccaccctcatcgagggcggcggcatcggcaccgcgatcgagacggcta 437 ||||||||||| ||| ||| |||||||||||||| |||| || |||||||| || Sbjct: 853 gcgagtgcaagaacacgctcgtcgagggcggcggcctcggtgttgccatcgagaccgcgg 912 Query: 438 cgtcgcacatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcga 497 |||||||||||||||||||||| | ||||||||||| ||||| || |||||| | |||| Sbjct: 913 cgtcgcacatcaaggtggagcccgcagccaacggcggcagcgtggtgaaggtggagtcga 972 Query: 498 catacaagctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctg 557 | ||||||||| |||||||| |||| | ||| || ||| | || || |||||| | Sbjct: 973 cctacaagctgctgccgggcatggacgagaaggacgaggaagcaaaggctaaggaggcac 1032 Query: 558 tcaccgcgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaact 617 ||||||| || ||||||| | ||||||| |||||| |||||||| ||||||||||||| Sbjct: 1033 tcaccgccattttcaagggtgccgaggcctacctcgtcgccaaccccgacgcctacaact 1092 Score = 111 bits (56), Expect = 4e-21 Identities = 152/184 (82%) Strand = Plus / Plus Query: 66 aatggcttccaccaacagctggacccacgagatcgaatcgccggtcgccgcaccgcgcct 125 |||||| ||| ||||||||||||||| ||||||| |||||||| ||||| || ||||| Sbjct: 517 aatggcctccgccaacagctggaccctcgagatcccttcgccggtggccgcgccacgcct 576 Query: 126 cttccgtgccggcgtcatggactggcacacactggcccctaagctcgcaccacacatcgt 185 ||||| |||| ||| || ||||||||||| ||||| || ||| |||| | ||| |||| Sbjct: 577 gttccgcgccgccgttattgactggcacaccctggcgcccaaggtcgcttcccacgtcgt 636 Query: 186 cgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagtttaactt 245 | |||| ||||| || || |||||||| |||||| | ||||| ||||||||||| ||||| Sbjct: 637 caccagcgcccaccccgtggagggcgacggcggcgttggcagcgtcaggcagttcaactt 696 Query: 246 cacc 249 |||| Sbjct: 697 cacc 700
>gb|U60764.1|SBU60764 Sorghum bicolor pathogenesis-related protein (PR-10) mRNA, complete cds Length = 884 Score = 109 bits (55), Expect = 2e-20 Identities = 240/299 (80%), Gaps = 2/299 (0%) Strand = Plus / Plus Query: 325 catgcccttcaacctcatgaaggagagactcgagttcatcgacgtcgaaaaatgcgagtg 384 |||||| |||| | ||||||||||||| ||||| ||| | ||||| || || |||||||| Sbjct: 261 catgccgttcagcttcatgaaggagaggctcgatttcctggacgtggacaagtgcgagtg 320 Query: 385 caagtccaccctcatcgagggcggcggcat-cggcaccgcgatcgagacggctacgtcgc 443 |||| ||| ||| ||||||||||| ||| || | ||| |||||||| || |||||| Sbjct: 321 caagaacacgctcgtcgagggcggcaacatgcgacgtcgc-atcgagaccgcggcgtcgc 379 Query: 444 acatcaaggtggagccgacggccaacggcggaagcgtcgtcaaggtgcaatcgacataca 503 |||||||||||||||| |||| |||||| ||||| || |||||| | ||||| |||| Sbjct: 380 acatcaaggtggagcccgcggcaggcggcggcagcgtggtgaaggtggagtcgacctaca 439 Query: 504 agctgttgccgggcgtggaggtgaacgatgagatcaccaaagccaaggagtctgtcaccg 563 ||||| ||| ||| ||||| | ||| || ||| |||| ||||||||| | |||||| Sbjct: 440 agctgctgcggggtgtggacgcgaaggacgaggaagccaaggccaaggaggcactcaccg 499 Query: 564 cgatcttcaaggccgttgaggccttcctcgttgccaacccggacgcctacaactgaatc 622 | || |||||||| | ||||||| |||||| |||||||| ||||||||||||| |||| Sbjct: 500 ccattttcaaggctgccgaggcctacctcgtcgccaaccccgacgcctacaactaaatc 558 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 182 tcgtcgccagtgcccatcctgttgagggcgaaggcggcataggcagtgtcaggcagttta 241 |||||||||| ||||| || || |||| ||| |||||| | ||||| ||||||||||| | Sbjct: 188 tcgtcgccagcgcccaccccgtggaggacgacggcggcgtcggcagcgtcaggcagttca 247 Query: 242 acttcacc 249 |||||||| Sbjct: 248 acttcacc 255 Score = 46.1 bits (23), Expect = 0.21 Identities = 32/35 (91%) Strand = Plus / Plus Query: 65 caatggcttccaccaacagctggacccacgagatc 99 ||||||| ||| ||||||||||||||| ||||||| Sbjct: 68 caatggcctccgccaacagctggaccctcgagatc 102
>emb|CR388064.10| Zebrafish DNA sequence from clone CH211-80E15 in linkage group 16, complete sequence Length = 119301 Score = 44.1 bits (22), Expect = 0.83 Identities = 25/26 (96%) Strand = Plus / Minus Query: 631 cctgctttgatttttgtgtgttttct 656 ||||||||||||||||| |||||||| Sbjct: 4349 cctgctttgatttttgtctgttttct 4324
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Plus Query: 773 tgatgttgtttgatgatgttgt 794 |||||||||||||||||||||| Sbjct: 7470543 tgatgttgtttgatgatgttgt 7470564
>emb|AL589765.19| Human DNA sequence from clone RP11-98D18 on chromosome 1 Contains the 3' end of the SNX27 gene for sorting nexin family member 27, the TNRC4 gene for trinucleotide repeat containing 4, five novel genes, a ribosomal protein S11 (RPS11) pseudogene, the MRPL9 gene for mitochondrial ribosomal protein L9, the OAZ3 gene for ornithine decarboxylase antizyme 3, a novel gene (FLJ36032) the TDRKH gene for tudor and KH domain containing, the RORC gene for RAR-related orphan receptor C and four CpG islands, complete sequence Length = 163389 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Plus Query: 640 atttttgtgtgttttcttgctg 661 |||||||||||||||||||||| Sbjct: 118889 atttttgtgtgttttcttgctg 118910
>dbj|AP005837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0024K20 Length = 165041 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Plus Query: 773 tgatgttgtttgatgatgttgt 794 |||||||||||||||||||||| Sbjct: 74347 tgatgttgtttgatgatgttgt 74368
>emb|AL953880.11| Zebrafish DNA sequence from clone CH211-236O11 in linkage group 16, complete sequence Length = 161603 Score = 44.1 bits (22), Expect = 0.83 Identities = 25/26 (96%) Strand = Plus / Minus Query: 631 cctgctttgatttttgtgtgttttct 656 ||||||||||||||||| |||||||| Sbjct: 70365 cctgctttgatttttgtctgttttct 70340
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 gcggcatcggcaccgcgatcg 428 ||||||||||||||||||||| Sbjct: 429790 gcggcatcggcaccgcgatcg 429810
>gb|EF064741.1| Homo sapiens chemokine (C-X-C motif) receptor 6 (CXCR6) gene, complete cds Length = 8845 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 5708 atgcccttcaacctcatgaag 5728
>gb|DQ895294.1| Homo sapiens clone FLH183034.01L; RZPDo839F02139D CXCR6 mRNA, partial sequence Length = 1029 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 733 atgcccttcaacctcatgaag 753
>gb|DQ892101.1| Synthetic construct Homo sapiens clone FLH183038.01X; RZPDo839F02140D CXCR6 mRNA, complete sequence Length = 1029 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 733 atgcccttcaacctcatgaag 753
>gb|AC166286.15| Medicago truncatula clone mth2-173c1, complete sequence Length = 114606 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 776 tgttgtttgatgatgttgttgcttg 800 |||||||||||| |||||||||||| Sbjct: 20870 tgttgtttgatgttgttgttgcttg 20894
>gb|AC151528.37| Medicago truncatula clone mth2-135j6, complete sequence Length = 103338 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 776 tgttgtttgatgatgttgttgcttg 800 |||||||||||| |||||||||||| Sbjct: 80577 tgttgtttgatgttgttgttgcttg 80601
>emb|CT573042.6| Platypus DNA sequence from clone CLM1-501G18, complete sequence Length = 125657 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 ccaaagccaaggagtctgtca 560 ||||||||||||||||||||| Sbjct: 115297 ccaaagccaaggagtctgtca 115317
>gb|AC174291.12| Medicago truncatula clone mth2-58k14, complete sequence Length = 117627 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 776 tgttgtttgatgatgttgttgcttg 800 |||||||||||| |||||||||||| Sbjct: 14824 tgttgtttgatgttgttgttgcttg 14800 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 776 tgttgtttgatgatgttgttgcttg 800 |||||||||||| |||||||||||| Sbjct: 43448 tgttgtttgatgttgttgttgcttg 43424
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 403 gggcggcggcatcggcaccgcgatc 427 |||||||| |||||||||||||||| Sbjct: 1309942 gggcggcgacatcggcaccgcgatc 1309966
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 atcggcaccgcgatcgagacg 433 ||||||||||||||||||||| Sbjct: 2362412 atcggcaccgcgatcgagacg 2362432
>gb|AC158172.17| Medicago truncatula clone mth2-143b6, complete sequence Length = 117641 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 aatcgccggtcgccgcaccgc 121 ||||||||||||||||||||| Sbjct: 98006 aatcgccggtcgccgcaccgc 97986
>gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocyclic beta-lactam antibiotic nocardicin A biosynthesis gene cluster, partial sequence Length = 33451 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cgccggtcgccgcaccgcgcc 124 ||||||||||||||||||||| Sbjct: 7902 cgccggtcgccgcaccgcgcc 7882
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 atcggcaccgcgatcgagacg 433 ||||||||||||||||||||| Sbjct: 1539538 atcggcaccgcgatcgagacg 1539558
>gb|BC033584.1| Homo sapiens chemokine (C-X-C motif) receptor 6, mRNA (cDNA clone MGC:34420 IMAGE:5225727), complete cds Length = 1923 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 765 atgcccttcaacctcatgaag 785
>gb|AY138899.1| Mycobacterium smegmatis glycopeptidolipid locus, complete sequence Length = 19698 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 gcggcatcggcaccgcgatcg 428 ||||||||||||||||||||| Sbjct: 5159 gcggcatcggcaccgcgatcg 5179
>gb|AC165369.3| Gallus gallus BAC clone CH261-58G18 from chromosome ul, complete sequence Length = 208903 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 634 gctttgatttttgtgtgtttt 654 ||||||||||||||||||||| Sbjct: 136292 gctttgatttttgtgtgtttt 136272
>gb|AY322543.1| Homo sapiens chemokine receptor 6 gene, complete cds Length = 1029 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 733 atgcccttcaacctcatgaag 753
>gb|AC162911.2| Mus musculus BAC clone RP24-363M14 from chromosome 12, complete sequence Length = 150202 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 637 ttgatttttgtgtgttttctt 657 ||||||||||||||||||||| Sbjct: 129571 ttgatttttgtgtgttttctt 129551
>gb|AC113331.6| Homo sapiens chromosome 11, clone CTD-3048C22, complete sequence Length = 143468 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 637 ttgatttttgtgtgttttcttgctg 661 |||||||||||||||||| |||||| Sbjct: 27556 ttgatttttgtgtgttttgttgctg 27532
>gb|AC099782.2| Homo sapiens chromosome 3 clone RP11-852E15, complete sequence Length = 209772 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 133139 atgcccttcaacctcatgaag 133159
>gb|AF354631.1| Pongo pygmaeus chemokine receptor 2 (CCR2) mRNA, partial cds, alternatively spliced Length = 449 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 221 atgcccttcaacctcatgaag 241
>gb|AF354630.1| Gorilla gorilla chemokine receptor 2 (CCR2) mRNA, partial cds, alternatively spliced Length = 452 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 221 atgcccttcaacctcatgaag 241
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 832 aataaaaggaaatatttggaa 852 ||||||||||||||||||||| Sbjct: 9937869 aataaaaggaaatatttggaa 9937889
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 832 aataaaaggaaatatttggaa 852 ||||||||||||||||||||| Sbjct: 8985888 aataaaaggaaatatttggaa 8985868
>ref|NM_001009051.1| Pan troglodytes chemokine (C-X-C motif) receptor 6 (CXCR6), mRNA gb|AF084229.1|AF084229 Pan troglodytes G protein-coupled receptor STRL33 mRNA, complete cds Length = 1029 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 733 atgcccttcaacctcatgaag 753
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 405 gcggcggcatcggcaccgcgatcga 429 |||||||||||||| |||||||||| Sbjct: 1253457 gcggcggcatcggccccgcgatcga 1253433
>emb|CR601642.1| full-length cDNA clone CS0DI053YA20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2242 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 1119 atgcccttcaacctcatgaag 1139
>emb|CR624554.1| full-length cDNA clone CS0DI057YM07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1348 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 228 atgcccttcaacctcatgaag 248
>gb|AF029759.1|AF029759 Homo sapiens mutant G protein-coupled receptor STRL33 (STRL33) gene, STRL33-3K allele, complete cds Length = 1029 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 733 atgcccttcaacctcatgaag 753
>dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1354_H07 Length = 157974 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 832 aataaaaggaaatatttggaa 852 ||||||||||||||||||||| Sbjct: 37331 aataaaaggaaatatttggaa 37311
>gb|AF271635.1|AF271635 Mycobacterium smegmatis putative transport membrane protein C (tmtpC) gene, complete cds Length = 2985 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 gcggcatcggcaccgcgatcg 428 ||||||||||||||||||||| Sbjct: 1139 gcggcatcggcaccgcgatcg 1159
>gb|AY439015.3| Mycobacterium smegmatis isolate mc2 155 insertion sequence IS1096 TnpA (tnpA) and TnpR genes, complete cds; and GPL gene cluster, complete sequence Length = 67229 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 gcggcatcggcaccgcgatcg 428 ||||||||||||||||||||| Sbjct: 4447 gcggcatcggcaccgcgatcg 4467
>emb|CT027556.11| Mouse DNA sequence from clone RP23-405M23 on chromosome 12, complete sequence Length = 209313 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 637 ttgatttttgtgtgttttctt 657 ||||||||||||||||||||| Sbjct: 77713 ttgatttttgtgtgttttctt 77733
>emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb0071E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132906 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 832 aataaaaggaaatatttggaa 852 ||||||||||||||||||||| Sbjct: 120205 aataaaaggaaatatttggaa 120185
>emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on chromosome X, complete sequence Length = 201821 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 832 aataaaaggaaatatttggaa 852 ||||||||||||||||||||| Sbjct: 194582 aataaaaggaaatatttggaa 194562
>gb|AF007545.1|AF007545 Homo sapiens SIV/HIV receptor Bonzo (Bonzo) mRNA, complete cds Length = 1029 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 733 atgcccttcaacctcatgaag 753
>gb|U73531.1|HSU73531 Human G protein-coupled receptor STRL33.3 (STRL33) mRNA, complete cds Length = 2804 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 2195 atgcccttcaacctcatgaag 2215
>gb|U73529.1|HSU73529 Human G protein-coupled receptor STRL33.1 (STRL33) mRNA, complete cds Length = 1918 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 763 atgcccttcaacctcatgaag 783
>ref|NM_006564.1| Homo sapiens chemokine (C-X-C motif) receptor 6 (CXCR6), mRNA emb|Y13248.1|HSY13248 Homo sapiens mRNA for orphan chemokine receptor TYMSTR Length = 1953 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 atgcccttcaacctcatgaag 346 ||||||||||||||||||||| Sbjct: 814 atgcccttcaacctcatgaag 834 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 140,516,625 Number of extensions: 7622203 Number of successful extensions: 161030 Number of sequences better than 10.0: 60 Number of HSP's gapped: 161023 Number of HSP's successfully gapped: 83 Length of query: 870 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 848 Effective length of database: 18,508,616,841 Effective search space: 15695307081168 Effective search space used: 15695307081168 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)