ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf42c17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK103424:Os08g0156800 190 7e-49
2AK062479:Os08g0436800 190 7e-49
3AK062367: 107 8e-24
4AK059470:Os09g0413500 61 6e-10
5AK100107:Os01g0279700 24 5.8
6AK067683:Os01g0279700 24 5.8
7AK102484:Os12g0628200 28 6.1
8AY305863:Os08g0422200 28 7.9 
>AK103424:Os08g0156800 |
          Length = 118
 Score =  190 bits (483), Expect = 7e-49
 Identities = 93/95 (97%), Positives = 93/95 (97%)
 Frame = +2

Query: 80  MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 259
           MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRP 
Sbjct: 1   MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60

Query: 260 EYKRSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 364
           EYKRSRLSRNRRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 61  EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
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>AK062479:Os08g0436800 |
          Length = 118

 Score =  190 bits (483), Expect = 7e-49
 Identities = 93/95 (97%), Positives = 93/95 (97%)
 Frame = +2

Query: 80  MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 259
           MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRP 
Sbjct: 1   MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60

Query: 260 EYKRSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 364
           EYKRSRLSRNRRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 61  EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
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>AK062367: |
          Length = 116

 Score =  107 bits (267), Expect = 8e-24
 Identities = 53/92 (57%), Positives = 66/92 (71%)
 Frame = +2

Query: 89  RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYK 268
           R+TYR+RHSYATKSN  +VVKTPGG+LV QY KK  +GPKC    + ++GI HL P EYK
Sbjct: 6   RVTYRRRHSYATKSNGIKVVKTPGGKLVAQYRKKATAGPKCGDCKQSLKGIKHLSPKEYK 65

Query: 269 RSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 364
              +S+  RTV+R YGG      VR+RI+RAF
Sbjct: 66  --TVSKTHRTVSRAYGGSRCATCVRQRIVRAF 95
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>AK059470:Os09g0413500 |
          Length = 62

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +2

Query: 272 SRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 364
           SRLSRNRRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 8   SRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 38
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>AK100107:Os01g0279700 |
          Length = 529

 Score = 23.9 bits (50), Expect(2) = 5.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 255 GLRCGIPWIFFPVTGHFG 202
           GL C +PW+   V+ +FG
Sbjct: 377 GLFCVLPWLTMAVSANFG 394



 Score = 22.7 bits (47), Expect(2) = 5.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -2

Query: 355 DDPLPDCRTRQNTTVRTVYSPPVP*QSGPLVLSRPQVW 242
           +DP      ++  T +T    PV      L+LS+P VW
Sbjct: 304 EDPGISAEEKKLITSQTTGGEPVKEIPWGLILSKPPVW 341
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>AK067683:Os01g0279700 |
          Length = 529

 Score = 23.9 bits (50), Expect(2) = 5.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 255 GLRCGIPWIFFPVTGHFG 202
           GL C +PW+   V+ +FG
Sbjct: 377 GLFCVLPWLTMAVSANFG 394



 Score = 22.7 bits (47), Expect(2) = 5.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -2

Query: 355 DDPLPDCRTRQNTTVRTVYSPPVP*QSGPLVLSRPQVW 242
           +DP      ++  T +T    PV      L+LS+P VW
Sbjct: 304 EDPGISAEEKKLITSQTTGGEPVKEIPWGLILSKPPVW 341
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>AK102484:Os12g0628200 |
          Length = 283

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
 Frame = +3

Query: 105 SATATPPSRTRLASSRPQVGGLCTSTPKS--------GRVGQNARL 218
           S TATPP+ +  +SSRP   G+ TS   +        G VG+  RL
Sbjct: 174 SLTATPPTFSSSSSSRPLGSGVSTSAAATEAVAVVVVGGVGRRRRL 219
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>AY305863:Os08g0422200 |
          Length = 225

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = -3

Query: 651 LNSIQTKLEFKSSCIKG*ASIENHLAKSREQHQPHMLESGF 529
           LNSI T      SC  G  S ENH       H  H +E  F
Sbjct: 47  LNSIHTHCSEAHSCNGGLQSSENHNKSRNRHHIDHNMEGIF 87


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 19,253,336
Number of extensions: 430079
Number of successful extensions: 1254
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1253
Number of HSP's successfully gapped: 10
Length of query: 234
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 137
Effective length of database: 11,515,878
Effective search space: 1577675286
Effective search space used: 1577675286
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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