| Clone Name | FLbaf45d03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC129333.4| Mus musculus BAC clone RP23-104F23 from 6, complete sequence Length = 216849 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 678 ctactccccccttctcctcttcctcc 703 |||||||||||||||||||||||||| Sbjct: 99255 ctactccccccttctcctcttcctcc 99280
>gb|AC107671.7| Mus musculus chromosome 7, clone RP23-112C18, complete sequence Length = 202894 Score = 48.1 bits (24), Expect = 0.050 Identities = 27/28 (96%) Strand = Plus / Minus Query: 676 ccctactccccccttctcctcttcctcc 703 |||||||||||||||||||||| ||||| Sbjct: 66566 ccctactccccccttctcctctccctcc 66539
>gb|AC124397.5| Mus musculus BAC clone RP24-348J16 from chromosome 13, complete sequence Length = 191713 Score = 46.1 bits (23), Expect = 0.20 Identities = 29/31 (93%) Strand = Plus / Plus Query: 673 tctccctactccccccttctcctcttcctcc 703 ||||||| |||||||||||||||| |||||| Sbjct: 40191 tctccctcctccccccttctcctcctcctcc 40221
>gb|AF247728.1|AF247728 Oncorhynchus mykiss glucose transporter 1A mRNA, complete cds Length = 2766 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 gcttgtccagcagagccagagcg 132 ||||||||||||||||||||||| Sbjct: 1412 gcttgtccagcagagccagagcg 1390
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 546 cacctcatcgccgagctcaccga 568 ||||||||||||||||||||||| Sbjct: 1086086 cacctcatcgccgagctcaccga 1086064
>ref|XM_001217449.1| Aspergillus terreus NIH2624 DNA-repair protein rad2 (ATEG_08864) mRNA, complete cds Length = 1209 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 269 gaagaagcgcaagaaggaggacgcca 294 ||||||||||||||||||||| |||| Sbjct: 1140 gaagaagcgcaagaaggaggaggcca 1165
>gb|AC102606.12| Mus musculus chromosome 7, clone RP23-390N24, complete sequence Length = 188836 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 675 tccctactccccccttctcctc 696 |||||||||||||||||||||| Sbjct: 40287 tccctactccccccttctcctc 40308
>gb|DQ396686.1| Rhodeus sericeus haplotype 14 cytochrome b gene, partial cds; mitochondrial Length = 1113 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 779 ctgccacgatgtaaattatggttga 803 ||||| ||||||||||||||||||| Sbjct: 186 ctgccgcgatgtaaattatggttga 210
>gb|DQ396685.1| Rhodeus sericeus haplotype 6 cytochrome b gene, partial cds; mitochondrial Length = 1113 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 779 ctgccacgatgtaaattatggttga 803 ||||| ||||||||||||||||||| Sbjct: 186 ctgccgcgatgtaaattatggttga 210
>gb|DQ396684.1| Rhodeus sericeus haplotype 3 cytochrome b gene, partial cds; mitochondrial Length = 1113 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 779 ctgccacgatgtaaattatggttga 803 ||||| ||||||||||||||||||| Sbjct: 186 ctgccgcgatgtaaattatggttga 210
>gb|DQ396683.1| Rhodeus sericeus haplotype 1 cytochrome b gene, partial cds; mitochondrial Length = 1113 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 779 ctgccacgatgtaaattatggttga 803 ||||| ||||||||||||||||||| Sbjct: 186 ctgccgcgatgtaaattatggttga 210
>gb|AC175741.5| Mus musculus chromosome 1, clone wi1-1093I15, complete sequence Length = 39340 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 676 ccctactccccccttctcctcttcc 700 |||||||||||||||||||| |||| Sbjct: 33224 ccctactccccccttctccttttcc 33200
>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence Length = 156084 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 676 ccctactccccccttctcctcttcc 700 |||||||||||||||||||| |||| Sbjct: 104295 ccctactccccccttctccttttcc 104271
>gb|AC133156.7| Mus musculus chromosome 15, clone RP24-291M22, complete sequence Length = 151577 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 684 cccccttctcctcttcctccc 704 ||||||||||||||||||||| Sbjct: 104457 cccccttctcctcttcctccc 104477
>ref|XM_503335.1| Yarrowia lipolytica CLIB122, YALI0D26840g predicted mRNA Length = 1398 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 tccccccttctcctcttcctc 702 ||||||||||||||||||||| Sbjct: 936 tccccccttctcctcttcctc 916
>gb|AC152394.11| Mus musculus chromosome 15, clone RP23-100K19, complete sequence Length = 203260 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 684 cccccttctcctcttcctccc 704 ||||||||||||||||||||| Sbjct: 152641 cccccttctcctcttcctccc 152661
>gb|AC102000.14| Mus musculus chromosome 15, clone RP24-467P24, complete sequence Length = 171400 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 684 cccccttctcctcttcctccc 704 ||||||||||||||||||||| Sbjct: 7565 cccccttctcctcttcctccc 7585
>gb|AC123954.4| Mus musculus BAC clone RP23-249L6 from 13, complete sequence Length = 200727 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 676 ccctactccccccttctcctc 696 ||||||||||||||||||||| Sbjct: 134901 ccctactccccccttctcctc 134921
>gb|AY236772.1| Pelobates fuscus MVZ233601 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 385 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 779 ctgccacgatgtaaattatggttga 803 ||||| ||||||||||||||||||| Sbjct: 190 ctgccgcgatgtaaattatggttga 214
>gb|AY236771.1| Pelobates fuscus MVZ233602 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 385 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 779 ctgccacgatgtaaattatggttga 803 ||||| ||||||||||||||||||| Sbjct: 190 ctgccgcgatgtaaattatggttga 214
>dbj|AK048379.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130054F14 product:unclassifiable, full insert sequence Length = 2275 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 676 ccctactccccccttctcctc 696 ||||||||||||||||||||| Sbjct: 1035 ccctactccccccttctcctc 1055
>gb|AC157021.6| Mus musculus 10 BAC RP24-328K10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 175825 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 676 ccctactccccccttctcctc 696 ||||||||||||||||||||| Sbjct: 148197 ccctactccccccttctcctc 148177
>gb|AC152977.1| Mus musculus 10 BAC RP23-251I19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192515 Score = 42.1 bits (21), Expect = 3.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 676 ccctactccccccttctcctcttcctccc 704 |||||||||||||||||||| |||||||| Sbjct: 151564 ccctactccccccttctcct-ttcctccc 151591
>gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190387 Score = 42.1 bits (21), Expect = 3.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 676 ccctactccccccttctcctcttcctccc 704 |||||||||||||||||||| |||||||| Sbjct: 21028 ccctactccccccttctcct-ttcctccc 21055
>gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosynthetic gene cluster, complete sequence Length = 59816 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 590 ccaccaccagcagctcgccgg 610 ||||||||||||||||||||| Sbjct: 41490 ccaccaccagcagctcgccgg 41470
>gb|AC154209.2| Mus musculus BAC clone RP24-378F12 from 12, complete sequence Length = 155916 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 676 ccctactccccccttctcctc 696 ||||||||||||||||||||| Sbjct: 51971 ccctactccccccttctcctc 51991
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 682 tccccccttctcctcttcctc 702 ||||||||||||||||||||| Sbjct: 3573531 tccccccttctcctcttcctc 3573551 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 112,337,535 Number of extensions: 6100787 Number of successful extensions: 158165 Number of sequences better than 10.0: 27 Number of HSP's gapped: 158165 Number of HSP's successfully gapped: 27 Length of query: 826 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 804 Effective length of database: 18,508,616,841 Effective search space: 14880927940164 Effective search space used: 14880927940164 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)