ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf48b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1X95402:Os03g0327600 42 5e-04
2AK069815:Os03g0327600 42 5e-04
3Os07g0683600:Os07g0683600 37 0.016
4AK060686:Os06g0256900 34 0.13
5Os10g0165300:Os10g0165300 32 0.85
6AK109930: 31 1.1
7AK108181:Os05g0581700 30 2.5
8AK111743:Os06g0275500 30 2.5
9AK105446:Os02g0733300 30 3.2
10AK101108:Os02g0733300 30 3.2
11AK100987:Os09g0264400 30 3.2
12AK066686:Os01g0147700 30 3.2
13AK105763:Os02g0575700 30 3.3
14AK058434:Os11g0528500 29 4.2
15AK109945:Os12g0600000 29 4.3
16Os04g0612300:Os04g0612300 29 5.5
17AK120584:Os10g0497800 29 5.5
18Os06g0497400:Os06g0497400 29 5.6
19Os06g0641800:Os06g0641800 28 7.2
20Os01g0216500:Os01g0216500 28 7.2
21AK099839:Os04g0660500 28 7.2
22AK110124: 28 7.3
23AK110646:Os03g0231300 28 7.3
24AK105271:Os07g0231900 28 9.4
25AK070173:Os01g0158600 28 9.4
26Os01g0328100:Os01g0328100 28 9.5

>X95402:Os03g0327600 |
          Length = 348
 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 5/168 (2%)
 Frame = +3

Query: 174 PEGSLPPPVRIYCREDAALNVGIDGNNNVVLVNADCSDLSQKWFPVYIRSSLDNGEIERK 353
           P G   P VRI+C+ D   +V + G  +V L   +  D  Q W      S+    E    
Sbjct: 192 PRGGNEPTVRIFCKADEGFSVTVRG-GSVCLAPTNPRDEYQHWIKDMRHSNSIKDEEGYP 250

Query: 354 PFFLMNAQTSQVITIPTWSRSTGQKVGLSSPPTTLLLVNTWLQEASKQLWTPEKPTRTDG 533
            F L+N  T + I       S G+       P  L+  N   Q+ S  LWT  +     G
Sbjct: 251 AFALVNRVTGEAI-----KHSQGE-----GHPVKLVPYNPGYQDES-VLWTESRDV-GHG 298

Query: 534 FYKLIVTNDEDASLNGL-----LGGVKVGTEVGIYYSSANSDNAVWKL 662
           F  + + N+   + + L      GGV+ GT V + +     DN  WK+
Sbjct: 299 FRCIRMVNNIYLNFDALHGDKDHGGVRDGTTVAL-WKWCEGDNQRWKI 345



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>AK069815:Os03g0327600 |
          Length = 348

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 5/168 (2%)
 Frame = +3

Query: 174 PEGSLPPPVRIYCREDAALNVGIDGNNNVVLVNADCSDLSQKWFPVYIRSSLDNGEIERK 353
           P G   P VRI+C+ D   +V + G  +V L   +  D  Q W      S+    E    
Sbjct: 192 PRGGNEPTVRIFCKADEGFSVTVRG-GSVCLAPTNPRDEYQHWIKDMRHSNSIKDEEGYP 250

Query: 354 PFFLMNAQTSQVITIPTWSRSTGQKVGLSSPPTTLLLVNTWLQEASKQLWTPEKPTRTDG 533
            F L+N  T + I       S G+       P  L+  N   Q+ S  LWT  +     G
Sbjct: 251 AFALVNRVTGEAI-----KHSQGE-----GHPVKLVPYNPGYQDES-VLWTESRDV-GHG 298

Query: 534 FYKLIVTNDEDASLNGL-----LGGVKVGTEVGIYYSSANSDNAVWKL 662
           F  + + N+   + + L      GGV+ GT V + +     DN  WK+
Sbjct: 299 FRCIRMVNNIYLNFDALHGDKDHGGVRDGTTVAL-WKWCEGDNQRWKI 345



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>Os07g0683600:Os07g0683600 |
          Length = 454

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 52/190 (27%), Positives = 74/190 (38%), Gaps = 6/190 (3%)
 Frame = +3

Query: 192 PPVRIYCREDAALNVGIDGNNNVVLVNADCSDLSQKWFPVYIRSSLDNGEIERKPFFLMN 371
           P VRI CR D A ++ +  N  V L   +  D  Q W      S+    E     F L+N
Sbjct: 189 PTVRILCRADEAYSLTV-RNGAVCLAPTNPRDDFQHWVKDMRHSTSIKDEEGYPAFALVN 247

Query: 372 AQTSQVITIPTWSRSTGQKVGLSSPPTTLLLVN-TWLQEASKQLWTPEKPTRTDGFYKLI 548
             T + I       S GQ     S P  L+  N  +L E+   LWT  K     GF  + 
Sbjct: 248 KATGEAI-----KHSLGQ-----SHPVRLVPYNPEYLDES--VLWTESKDV-GHGFRCVR 294

Query: 549 VTNDEDASLNGL-----LGGVKVGTEVGIYYSSANSDNAVWKLTSSITNCYP**ATTYKS 713
           + N+   + +        GGV  GT V + +     DN  WK+    +   P        
Sbjct: 295 MVNNIYLNFDAFHGDKDHGGVHDGTTV-VLWEWCKGDNQRWKILPCCSRPLPPALLPPPL 353

Query: 714 PLPVVLARMI 743
           PLP + A+ +
Sbjct: 354 PLPPLAAKAV 363



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>AK060686:Os06g0256900 |
          Length = 497

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
 Frame = +3

Query: 63  MAAAAGLVWVTLLMCVALGAGQLDRA-SIQKALVAAFFP---EGSLPPPVRIYCREDAAL 230
           MAAA G V + +L       GQ D + ++ K+++  FF     G LPP  R+  R D+AL
Sbjct: 1   MAAAGGAVLLLVLATATSVTGQHDYSDALHKSIL--FFEGQRSGRLPPDQRLRWRRDSAL 58

Query: 231 NVGIDGNNNVVLVNADCSDLSQKWFPVYIRSSL 329
           N G     ++     D  D  +  FP+   ++L
Sbjct: 59  NDGATAGVDLTGGYYDAGDNVKFGFPMAFTATL 91



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>Os10g0165300:Os10g0165300 |
          Length = 501

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
 Frame = +3

Query: 255 NVVLVNADCSDLSQKWFPVYIRSSLDNGEIERKPFFLMNAQTS-----QVITIPTWSRST 419
           N + +   C +L+Q    V  R  ++  EI + P+     + +      V  +P  ++  
Sbjct: 325 NTLSMGKACDELAQV---VGSRRRIEESEIGQLPYLQAVIKETLRLHPPVPLLPHRAKMA 381

Query: 420 GQKVGLSSPPTTLLLVNTWLQEASKQLWT-PEK 515
            Q +G + P  T +L+N W     K +WT PEK
Sbjct: 382 MQIMGYTIPNGTKILINVWAIGRDKNIWTEPEK 414



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>AK109930: |
          Length = 138

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
 Frame = -1

Query: 252 CCRLCPRSARRPPCSISSRAAAGNLQGRRRQP------KLSG--CSPDQVARRRAQHT*A 97
           CC+ C RS RR   + +  AA    QGR   P      KL+   C   + A R   H   
Sbjct: 54  CCQCCCRSRRRLAAAAAPAAATAAAQGRTTAPTTLIRTKLNSLTCLRTRRASRLPHHRLR 113

Query: 96  RSPKLS 79
           RSP  S
Sbjct: 114 RSPNRS 119



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>AK108181:Os05g0581700 |
          Length = 276

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 12/103 (11%)
 Frame = -2

Query: 596 YATQQAVKASILVVGNNQFVKAVGACGLLRRPQLLACFLQPRVDQQ*GGRRARQSHLLSS 417
           +  +QAV+ +          + +G+ G  RR    A   + R  +   GRR R+S + + 
Sbjct: 161 FEDKQAVRVNKARAPRRSRSEKMGSRGAFRR----AVSPELRRSESDNGRR-RRSSVTAR 215

Query: 416 AA*PCWDGDD------------LRRLRIHQKEGLALNLSVVQG 324
            A  CW  DD             ++ R H++E + + +S+V G
Sbjct: 216 DAEVCWGADDAEEFRRTVEAFIAKQTRFHREESMTMTMSIVAG 258



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>AK111743:Os06g0275500 |
          Length = 896

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/53 (28%), Positives = 20/53 (37%)
 Frame = -1

Query: 354 ACAQSLRCPRTSGCTQGTISVTSHCSRRLRGQHCCCRLCPRSARRPPCSISSR 196
           AC +   C     C +        C  R RG HC    C   +R+ PC  + R
Sbjct: 655 ACGKQCPCLTNGTCCEKYCGCPKMCKNRFRGCHCAKSQC--RSRQCPCFAADR 705



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>AK105446:Os02g0733300 |
          Length = 508

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
 Frame = +3

Query: 60  AMAAAAGLVWVTLLMCVALGAGQLDRA-SIQKALVAAFFP---EGSLPPPVRIYCREDAA 227
           A+ AAA LV +     V + AGQ D   ++ K+++  FF     G LPP  R+  R D+ 
Sbjct: 12  AVVAAAVLVLLLSPAAVVVVAGQHDYGDALHKSIL--FFEGQRSGRLPPDQRLRWRRDSG 69

Query: 228 LNVGIDGNNNVVLVNADCSDLSQKWFPVYIRSSL 329
           L+ G   + ++     D  D  +  FP+   ++L
Sbjct: 70  LHDGAAASVDLTGGYYDAGDNVKFGFPMAFTATL 103



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>AK101108:Os02g0733300 |
          Length = 508

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
 Frame = +3

Query: 60  AMAAAAGLVWVTLLMCVALGAGQLDRA-SIQKALVAAFFP---EGSLPPPVRIYCREDAA 227
           A+ AAA LV +     V + AGQ D   ++ K+++  FF     G LPP  R+  R D+ 
Sbjct: 12  AVVAAAVLVLLLSPAAVVVVAGQHDYGDALHKSIL--FFEGQRSGRLPPDQRLRWRRDSG 69

Query: 228 LNVGIDGNNNVVLVNADCSDLSQKWFPVYIRSSL 329
           L+ G   + ++     D  D  +  FP+   ++L
Sbjct: 70  LHDGAAASVDLTGGYYDAGDNVKFGFPMAFTATL 103



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>AK100987:Os09g0264400 |
          Length = 519

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +3

Query: 390 ITIPTWSRSTGQKVGLSSPPTTLLLVNTWLQEASKQLWTPEKPTRTDGF 536
           + +P  SR      G   P  T +LVNTW       +W   +  R + F
Sbjct: 381 LLVPRMSREDASVAGYDVPAGTRVLVNTWTIGRDPSVWDSPEQFRPERF 429



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>AK066686:Os01g0147700 |
          Length = 700

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 462 LVNTWLQEASKQLWTPEKPTRTDGFYKLIVTNDEDASLNGL 584
           LV++W +E  K  W P K    DG  K +V +D+D  L  L
Sbjct: 597 LVSSWQEEIKKPSWHPYKIITVDGEDKEVV-DDDDTKLRHL 636



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>AK105763:Os02g0575700 |
          Length = 655

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -1

Query: 375 AHSSERRACAQSLRCPRTSGCTQGTISVTSHCSRRLRGQHCCCRLCPRSAR 223
           AH   RR C Q        GCT+     T HC     G+ C  + CP++AR
Sbjct: 307 AHGGGRR-CMQL-------GCTKSAEGKTDHCIAHGGGRRCGHQGCPKAAR 349



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>AK058434:Os11g0528500 |
          Length = 151

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = -3

Query: 616 PTSVPTFTPPNRPLRLASSSLVTISL*KPSVRVGFSGVHSCLLASCSHVLTSNRVVGGLD 437
           P S+P   PP R  R +++S       + ++R G +   + +   C ++ +       L 
Sbjct: 27  PLSLPAPAPPRRGARASTASA------RITMRFGVASKQAYICRDCGYIYSDRTPFDKLP 80

Query: 436 SPTFCPV 416
              FCPV
Sbjct: 81  DKYFCPV 87



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>AK109945:Os12g0600000 |
          Length = 126

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
 Frame = -1

Query: 387 PETSAHSSERRACAQSLRCPRT-SGCT---QGTISVTSHCSRRLRGQHCCCRL---CPRS 229
           P   A + +R      L CP + SGC+   Q  +++ +  S    G +C   +   CP  
Sbjct: 19  PVVEADAEQRMTTWTQLSCPTSASGCSASLQRNVAMLASTS----GGNCSEMMVVTCP-- 72

Query: 228 ARRPPCS-ISSRAAAGNLQGRRRQPKLSGCSPDQVARRRAQH 106
            RRP CS + + AAA  + G RR+      SP    R   QH
Sbjct: 73  LRRPTCSCVVTTAAASPVAGHRRR----SSSPASPRRLPPQH 110



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>Os04g0612300:Os04g0612300 |
          Length = 202

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
 Frame = -3

Query: 595 TPPNRPLRLASSSLVTISL*KPSVRVGFSGVHSCLLASCSHVLTS--NRVVGGLDSPTFC 422
           TPP  P   A+ +        PS   G   V +  L +C   L    + VVG     T C
Sbjct: 84  TPPPTPATPATPTTPPTPAPAPSTPTGKCPVDTLKLLACVDALNGLVHAVVGATAGDTCC 143

Query: 421 PVLRDHVGMVMT*DVCAFIRKKGL 350
           P+L     +     +C  I+ K L
Sbjct: 144 PLLSGVADLDAALCLCTAIKAKAL 167



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>AK120584:Os10g0497800 |
          Length = 321

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = +3

Query: 42  SSYTPTAMAAAAGLVWVTLLMCVALGA 122
           SSYT T + AA  L  V LL+ VALGA
Sbjct: 37  SSYTTTVILAALLLASVALLLLVALGA 63



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>Os06g0497400:Os06g0497400 |
          Length = 256

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -1

Query: 255 CCCRLCPRSARRPPCSISSRAAAGNLQGRRRQPKLSGCS 139
           C CR+     RRP C+  +  AA  L+    +P L+GCS
Sbjct: 207 CYCRV---RLRRPACAAPAGRAARRLEKACSRPGLAGCS 242



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>Os06g0641800:Os06g0641800 |
          Length = 520

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 390 ITIPTWSRSTGQKVGLSSPPTTLLLVNTWLQEASKQLW 503
           + +P   R+T Q +G   P   ++LVN W      Q W
Sbjct: 383 LLLPRECRNTCQVLGFDVPKGAMVLVNAWAISRDPQYW 420



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>Os01g0216500:Os01g0216500 |
          Length = 378

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -3

Query: 247 PSMPTFSAASSLQYILTGGGREPSGKKAATKAFWMLARSSCPAPSAT 107
           PS   FSA+S L+    GGG  P    A T A      S+CP P+A+
Sbjct: 297 PSRFGFSASSRLRACCGGGGGGPYNYNA-TAACGFPGASACPDPAAS 342



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>AK099839:Os04g0660500 |
          Length = 1357

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +3

Query: 396 IPTWSRSTGQKVGLSSPPTTLLLVNTWLQEASKQLWTPEKPTRTDGFYKLIVTNDEDAS 572
           I  + R   QK  +  P    LL++ WLQ + + L +  +P ++    + I  +DE +S
Sbjct: 247 ITDFLRQCFQKDSIQRPDAKTLLMHPWLQNSRRALPSLRQPVQSPSTVRDIDEDDEGSS 305



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>AK110124: |
          Length = 831

 Score = 28.5 bits (62), Expect = 7.3
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 381 TSAHSSERRACAQSLRCPRTSGCTQGTISVTSHCSRRLRGQHCCCRLCPRSARRPPCSIS 202
           T + S+ +RA A +     +S     + S +S C+R    Q C     P S   PP + +
Sbjct: 54  TPSPSAAQRASASTSAAASSSRSRCPSKSPSSRCARAPPSQRCSSPTLPSSTAPPPSTPA 113

Query: 201 SR 196
           SR
Sbjct: 114 SR 115



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>AK110646:Os03g0231300 |
          Length = 256

 Score = 28.5 bits (62), Expect = 7.3
 Identities = 29/96 (30%), Positives = 32/96 (33%), Gaps = 9/96 (9%)
 Frame = -1

Query: 369 SSERRACAQSLRCPRTSGCTQGTISVTSHCSRRLRGQHCCCRLCPRSARRPPCSISSRAA 190
           SS RR    S R PR            S C R             R A   P     R A
Sbjct: 122 SSPRRGEGSSRRAPRRQIRRHRYSPPPSSCRREEGSSRRARAREGRGAAGEPAP-EGRGA 180

Query: 189 AGNLQG---------RRRQPKLSGCSPDQVARRRAQ 109
           AG L           RRRQ +   CSP   +RRR +
Sbjct: 181 AGELLAARSASTAAPRRRQTRRHRCSPPSTSRRRGE 216



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>AK105271:Os07g0231900 |
          Length = 481

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 299 MVPCVHPLVLGQRRD*AQALLSDECADVSGHHHPNMVT 412
           +V   H +  GQRR     ++  + +D +GHHH  +VT
Sbjct: 164 IVSISHIMDDGQRRPQCTGIIIKQWSDDTGHHHATIVT 201



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>AK070173:Os01g0158600 |
          Length = 1021

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +3

Query: 66  AAAAGLVWVTLLMCVALGAGQLDRASIQKALVAAFFPEGSLPPPVRIYCRED 221
           AAAA    V +L+ V L         IQ     +  P  S PPP  + CR D
Sbjct: 8   AAAASAPIVRMLLLVLL--------QIQLVAALSLLPPASAPPPAALPCRPD 51



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>Os01g0328100:Os01g0328100 |
          Length = 160

 Score = 28.1 bits (61), Expect = 9.5
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -1

Query: 267 RGQHCCCRLCPRSARRPPCSISSRAAAGNLQGRRRQPK 154
           R + CC R CP    RPP   SS  AA  L   RR+P+
Sbjct: 45  RDRRCCLRPCP----RPP---SSSTAATALVRHRRRPR 75


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 29,271,538
Number of extensions: 711098
Number of successful extensions: 2595
Number of sequences better than 10.0: 26
Number of HSP's gapped: 2590
Number of HSP's successfully gapped: 26
Length of query: 318
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 217
Effective length of database: 11,355,714
Effective search space: 2464189938
Effective search space used: 2464189938
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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