ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf48b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC187766.3| Gallus gallus BAC clone CH261-163J22 from chromos... 44 0.91
2gb|AC174299.9| Medicago truncatula clone mth2-80e19, complete se... 44 0.91
3gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s... 42 3.6
4gb|AC120869.12| Mus musculus chromosome 9, clone RP23-128A11, co... 42 3.6
5gb|AC117701.10| Mus musculus chromosome 16, clone RP23-463N5, co... 42 3.6
6gb|AC123909.2| Homo sapiens chromosome 16 clone RP11-27L11, comp... 42 3.6
7gb|AC009055.10| Homo sapiens chromosome 16 clone RP11-256I9, com... 42 3.6
8gb|AC116690.15| Mus musculus chromosome 8, clone RP24-279I6, com... 42 3.6
9gb|AC158218.4| Mus musculus chromosome 8, clone RP23-196J23, com... 42 3.6
10gb|AC091201.4| Drosophila melanogaster 3L BAC RP98-47H5 (Roswell... 42 3.6
11gb|AC016266.14| Homo sapiens chromosome 15, clone RP11-2C7, comp... 42 3.6
12emb|CT009578.7| Mouse DNA sequence from clone RP23-24O23 on chro... 42 3.6

>gb|AC187766.3| Gallus gallus BAC clone CH261-163J22 from chromosome z, complete
             sequence
          Length = 196662
 Score = 44.1 bits (22), Expect = 0.91
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 473   gtggctgcaagaagcaagcaag 494
             ||||||||||||||||||||||
Sbjct: 35824 gtggctgcaagaagcaagcaag 35803



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>gb|AC174299.9| Medicago truncatula clone mth2-80e19, complete sequence
          Length = 129721

 Score = 44.1 bits (22), Expect = 0.91
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 851   tgatattattatatctaataattgtt 876
             |||||||||||||||| |||||||||
Sbjct: 90040 tgatattattatatctcataattgtt 90065



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>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence
          Length = 24543557

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 776     ttatttaatgtcctcgttcat 796
               |||||||||||||||||||||
Sbjct: 5407377 ttatttaatgtcctcgttcat 5407397



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>gb|AC120869.12| Mus musculus chromosome 9, clone RP23-128A11, complete sequence
          Length = 244776

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 840    gagttcatctatgatattattatatctaa 868
              |||||||||||||||||||  ||||||||
Sbjct: 125409 gagttcatctatgatattaaaatatctaa 125381



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>gb|AC117701.10| Mus musculus chromosome 16, clone RP23-463N5, complete sequence
          Length = 170497

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 849    tatgatattattatatctaat 869
              |||||||||||||||||||||
Sbjct: 113161 tatgatattattatatctaat 113181



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>gb|AC123909.2| Homo sapiens chromosome 16 clone RP11-27L11, complete sequence
          Length = 134922

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 846    atctatgatattattatatctaata 870
              ||||| |||||||||||||||||||
Sbjct: 134791 atctaagatattattatatctaata 134767



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>gb|AC009055.10| Homo sapiens chromosome 16 clone RP11-256I9, complete sequence
          Length = 170831

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 846    atctatgatattattatatctaata 870
              ||||| |||||||||||||||||||
Sbjct: 167954 atctaagatattattatatctaata 167978



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>gb|AC116690.15| Mus musculus chromosome 8, clone RP24-279I6, complete sequence
          Length = 171583

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 854    tattattatatctaataattg 874
              |||||||||||||||||||||
Sbjct: 139008 tattattatatctaataattg 139028



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>gb|AC158218.4| Mus musculus chromosome 8, clone RP23-196J23, complete sequence
          Length = 239980

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 854   tattattatatctaataattg 874
             |||||||||||||||||||||
Sbjct: 92126 tattattatatctaataattg 92146



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>gb|AC091201.4| Drosophila melanogaster 3L BAC RP98-47H5 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 187000

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 776   ttatttaatgtcctcgttcat 796
             |||||||||||||||||||||
Sbjct: 95803 ttatttaatgtcctcgttcat 95823



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>gb|AC016266.14| Homo sapiens chromosome 15, clone RP11-2C7, complete sequence
          Length = 149387

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 856   ttattatatctaataattgtt 876
             |||||||||||||||||||||
Sbjct: 56804 ttattatatctaataattgtt 56824



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>emb|CT009578.7| Mouse DNA sequence from clone RP23-24O23 on chromosome 16, complete
             sequence
          Length = 40260

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 919   agctatgatattatttactac 939
             |||||||||||||||||||||
Sbjct: 22806 agctatgatattatttactac 22826


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 155,168,892
Number of extensions: 7947911
Number of successful extensions: 152363
Number of sequences better than 10.0: 12
Number of HSP's gapped: 152363
Number of HSP's successfully gapped: 12
Length of query: 954
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 931
Effective length of database: 18,503,978,556
Effective search space: 17227204035636
Effective search space used: 17227204035636
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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