ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf45a19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK064179:Os06g0184100 124 7e-29
2Os01g0258600:Os01g0258600 116 3e-27
3AK103095:Os02g0235200 30 2.2
4AK100104:Os04g0413900 30 2.9
5AK119967:Os09g0524500 28 6.4
6AK121001:Os01g0721900 28 8.3
7AK108349:Os06g0133200 28 8.3
8AK073433:Os01g0957200 28 8.3 
>AK064179:Os06g0184100 |
          Length = 111
 Score =  124 bits (312), Expect = 7e-29
 Identities = 64/84 (76%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
 Frame = +1

Query: 127 MGTEDTKDMLKNADWKTVSG-PVITESSQPVVKKRLPKKIRQVPECYFLPRRSLPSALAI 303
           MG+EDTKDMLKN DWKTV G  V T+ SQPVVKKRLPKKIRQVPECYFLPRR LPSALAI
Sbjct: 1   MGSEDTKDMLKNVDWKTVGGGSVTTDPSQPVVKKRLPKKIRQVPECYFLPRRYLPSALAI 60

Query: 304 YXXXXXXXXXXXMLLEVWINKKIK 375
           Y           MLLEVWINKKIK
Sbjct: 61  YGAVCAAGVGAGMLLEVWINKKIK 84
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>Os01g0258600:Os01g0258600 |
          Length = 164

 Score =  116 bits (291), Expect(2) = 3e-27
 Identities = 59/88 (67%), Positives = 65/88 (73%)
 Frame = +1

Query: 88  PPANGARSAGSFRMGTEDTKDMLKNADWKTVSGPVITESSQPVVKKRLPKKIRQVPECYF 267
           P ++ + +    RMG+EDTKDMLKN DWKTV G V T+ SQPVVKKRLPKKIRQVPECYF
Sbjct: 50  PTSSTSPTVRRSRMGSEDTKDMLKNVDWKTVGGSVSTDPSQPVVKKRLPKKIRQVPECYF 109

Query: 268 LPRRSLPSALAIYXXXXXXXXXXXMLLE 351
           LPRRSLPSALAIY           MLLE
Sbjct: 110 LPRRSLPSALAIYGAACAAGVGAGMLLE 137



 Score = 23.5 bits (49), Expect(2) = 3e-27
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 374 KRMAALSGRWANDVDA 421
           +R   LSG+WAND+ A
Sbjct: 137 ERTVPLSGKWANDLIA 152
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>AK103095:Os02g0235200 |
          Length = 204

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 42  SAAPRDLSGRRRQPASAGKRRTQRRQFQDG 131
           +A PR  +GRR  P +AG+ R   R ++DG
Sbjct: 131 AAEPRRKAGRRGSPRAAGEDRADERAWRDG 160
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>AK100104:Os04g0413900 |
          Length = 245

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +1

Query: 16  PRTESPRFAAPHHGTSPAGDDNRPPPANGARSAGSFRMGTEDTKDMLKNAD 168
           PR +S   AAP+H ++P     RPP     R    F+    D  D L+N D
Sbjct: 146 PRPKSAGPAAPYHQSAPVKVPVRPP-----RRQEMFKWDELDDDDFLRNGD 191
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>AK119967:Os09g0524500 |
          Length = 223

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +3

Query: 12  SPSNRVAPVCSAAPRDLS--GRRRQPASAGKRRTQRRQFQDG 131
           SPSNR+    +   R  S   RRR PA+  +RR  RR+ + G
Sbjct: 66  SPSNRLTTTVAPGRRGGSRAARRRHPAARRRRRGVRRRARSG 107
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>AK121001:Os01g0721900 |
          Length = 380

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
 Frame = +1

Query: 19  RTESPRFAAPHHG-------TSPAGDDNRPPP-ANGARSAGSFRMGTEDTKDMLKNADWK 174
           R   PR  AP HG           GDD+  PP  N  R +G+ R G E  +D     +W 
Sbjct: 132 RERGPR--APFHGGRRGGYRNGEYGDDSERPPRRNYERHSGTGR-GYEMKRDGAGRGNWG 188

Query: 175 TVSGPVITESSQPVVK 222
           T +   + + ++  +K
Sbjct: 189 TATDEALAQETEEALK 204
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>AK108349:Os06g0133200 |
          Length = 167

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 20  EQSRPGLQRRTTGPLRPATTTGLRRQ 97
           E+ RPG +RR    LRPA  +G  RQ
Sbjct: 63  ERVRPGDERRRARELRPAAASGRHRQ 88
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>AK073433:Os01g0957200 |
          Length = 389

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -1

Query: 167 SAFFSISLVSSVPILKLPALRAPFAGGGRLSS 72
           S+  S+S VSS P L LP LR+P     RLS+
Sbjct: 11  SSSSSLSGVSSQPPLHLPRLRSPHQASRRLSA 42


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 24,456,816
Number of extensions: 541918
Number of successful extensions: 1854
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1852
Number of HSP's successfully gapped: 9
Length of query: 290
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 190
Effective length of database: 11,395,755
Effective search space: 2165193450
Effective search space used: 2165193450
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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