ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf45a19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT828253.1| Oryza sativa (indica cultivar-group) cDNA clone:... 280 8e-72
2dbj|AK241189.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 280 8e-72
3emb|CT831757.1| Oryza sativa (indica cultivar-group) cDNA clone:... 256 1e-64
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 256 1e-64
5dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic D... 256 1e-64
6ref|NM_001063525.1| Oryza sativa (japonica cultivar-group) Os06g... 228 3e-56
7dbj|AK064179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 3e-56
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 222 2e-54
9dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D... 222 2e-54
10ref|NM_001049171.1| Oryza sativa (japonica cultivar-group) Os01g... 200 6e-48
11gb|AC174465.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 50 0.013
12emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chr... 46 0.21
13emb|BX248120.7| Zebrafish DNA sequence from clone CH211-160J6 in... 46 0.21
14gb|AC114000.5| Mus musculus BAC clone RP23-161K1 from chromosome... 44 0.83
15gb|AC151835.4| Mus musculus BAC clone RP23-333J1 from chromosome... 44 0.83
16emb|AL592185.35| Mouse DNA sequence from clone RP23-341J22 on ch... 44 0.83
17gb|AE014847.1| Plasmodium falciparum 3D7 chromosome 12, section ... 44 0.83
18emb|CU024870.3| Zebrafish DNA sequence from clone CH211-193F12, ... 42 3.3
19gb|AC185143.2| Nasonia vitripennis BAC NV_Bb-44F11 (Clemson Uni... 42 3.3
20gb|AC134251.3| Mus musculus BAC clone RP23-430D14 from chromosom... 42 3.3
21gb|AC127547.2| Mus musculus BAC clone RP24-498C13 from chromosom... 42 3.3
22gb|AC113123.8| Mus musculus chromosome 8, clone RP23-349O15, com... 42 3.3
23gb|AY222866.1| Schistosoma japonicum clone ZZD1204 mRNA sequence 42 3.3
24gb|AC157816.4| Mus musculus chromosome 3, clone RP24-255I19, com... 42 3.3
25gb|AC010483.7| Homo sapiens chromosome 5 clone CTD-2321L15, comp... 42 3.3
26gb|AC107082.3| Homo sapiens BAC clone RP11-807A15 from 2, comple... 42 3.3
27gb|AC025475.5| Homo sapiens chromosome 5 clone RP11-351N6, compl... 42 3.3
28emb|CR380956.1| Candida glabrata strain CBS138 chromosome J comp... 42 3.3
29gb|AC102253.9| Mus musculus chromosome 3, clone RP24-175A24, com... 42 3.3
30ref|XM_447746.1| Candida glabrata CBS138, CAGL0J00781g partial mRNA 42 3.3
31emb|BX088691.4| Zebrafish DNA sequence from clone CH211-210P4 in... 42 3.3
32emb|AL928941.12| Zebrafish DNA sequence from clone CH211-236L14 ... 42 3.3
33emb|AL670290.13| Mouse DNA sequence from clone RP23-309M8 on chr... 42 3.3 
>emb|CT828253.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA054F10, full
           insert sequence
          Length = 692
 Score =  280 bits (141), Expect = 8e-72
 Identities = 255/293 (87%)
 Strand = Plus / Plus

                                                                       
Query: 120 tttcaggatgggtactgaagacactaaagatatgctgaagaatgcggactggaagacagt 179
           |||||||||||| | ||| ||||| ||||||||||||||||||| ||||||||| |||||
Sbjct: 67  tttcaggatgggcagtgaggacacaaaagatatgctgaagaatgtggactggaaaacagt 126

                                                                       
Query: 180 gagtggtcccgttattaccgagtcaagccagccggttgtcaagaagcgtcttccgaagaa 239
             ||||| | || |  |||||  ||||||| || ||||| || |||||||| ||||||||
Sbjct: 127 tggtggttcggtgagcaccgacccaagccaaccagttgttaaaaagcgtctcccgaagaa 186

                                                                       
Query: 240 aatcagacaagtccctgagtgttactttctgcctcgacgatctttgccgtctgcattggc 299
           |||||||||||| ||||| || || ||||||||||| ||||||||||| |||||||||||
Sbjct: 187 aatcagacaagttcctgaatgctattttctgcctcggcgatctttgccttctgcattggc 246

                                                                       
Query: 300 aatctacggtgctgtttgtgctgctggagttggtgcagggatgttgcttgaggtttggat 359
           |||||| || ||||  ||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 247 aatctatggcgctgcgtgtgctgctggagttggcgcagggatgctgcttgaggtttggat 306

                                                                
Query: 360 aaacaaaaagatcaaagaggatggcggcgttgtctgggagatgggcaaatgat 412
           |||||||||||||||||||||  | | | |||||||||| |||||||||||||
Sbjct: 307 aaacaaaaagatcaaagaggacagtgccattgtctgggaaatgggcaaatgat 359
to top
>dbj|AK241189.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065120K22,
           full insert sequence
          Length = 2503

 Score =  280 bits (141), Expect = 8e-72
 Identities = 255/293 (87%)
 Strand = Plus / Plus

                                                                       
Query: 120 tttcaggatgggtactgaagacactaaagatatgctgaagaatgcggactggaagacagt 179
           |||||||||||| | ||| ||||| ||||||||||||||||||| ||||||||| |||||
Sbjct: 70  tttcaggatgggcagtgaggacacaaaagatatgctgaagaatgtggactggaaaacagt 129

                                                                       
Query: 180 gagtggtcccgttattaccgagtcaagccagccggttgtcaagaagcgtcttccgaagaa 239
             ||||| | || |  |||||  ||||||| || ||||| || |||||||| ||||||||
Sbjct: 130 tggtggttcggtgagcaccgacccaagccaaccagttgttaaaaagcgtctcccgaagaa 189

                                                                       
Query: 240 aatcagacaagtccctgagtgttactttctgcctcgacgatctttgccgtctgcattggc 299
           |||||||||||| ||||| || || ||||||||||| ||||||||||| |||||||||||
Sbjct: 190 aatcagacaagttcctgaatgctattttctgcctcggcgatctttgccttctgcattggc 249

                                                                       
Query: 300 aatctacggtgctgtttgtgctgctggagttggtgcagggatgttgcttgaggtttggat 359
           |||||| || ||||  ||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 250 aatctatggcgctgcgtgtgctgctggagttggcgcagggatgctgcttgaggtttggat 309

                                                                
Query: 360 aaacaaaaagatcaaagaggatggcggcgttgtctgggagatgggcaaatgat 412
           |||||||||||||||||||||  | | | |||||||||| |||||||||||||
Sbjct: 310 aaacaaaaagatcaaagaggacagtgccattgtctgggaaatgggcaaatgat 362
to top
>emb|CT831757.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN007C07, full
           insert sequence
          Length = 810

 Score =  256 bits (129), Expect = 1e-64
 Identities = 260/303 (85%), Gaps = 3/303 (0%)
 Strand = Plus / Plus

                                                                       
Query: 113 caggcagtttcaggatgggtactgaagacactaaagatatgctgaagaatgcggactgga 172
           |||||| |||||||||||| | ||| ||||| ||||||||||||||||||| ||||||||
Sbjct: 231 caggcattttcaggatgggcagtgaggacacaaaagatatgctgaagaatgtggactgga 290

                                                                       
Query: 173 agacagtgagtggtc---ccgttattaccgagtcaagccagccggttgtcaagaagcgtc 229
           | |||||  |||||    | || | ||| ||  ||||||| || ||||| || |||||||
Sbjct: 291 aaacagttggtggtggttcagtgactactgacccaagccaaccagttgttaaaaagcgtc 350

                                                                       
Query: 230 ttccgaagaaaatcagacaagtccctgagtgttactttctgcctcgacgatctttgccgt 289
           | || |||||||| |||||||| ||||| || || ||||||||||| ||||||||||| |
Sbjct: 351 tcccaaagaaaattagacaagttcctgaatgctattttctgcctcggcgatctttgcctt 410

                                                                       
Query: 290 ctgcattggcaatctacggtgctgtttgtgctgctggagttggtgcagggatgttgcttg 349
           |||||||||||||||| || ||||| ||||||||||||||||| ||||||||| ||||||
Sbjct: 411 ctgcattggcaatctatggcgctgtgtgtgctgctggagttggcgcagggatgctgcttg 470

                                                                       
Query: 350 aggtttggataaacaaaaagatcaaagaggatggcggcgttgtctgggagatgggcaaat 409
           |||||||||||||||||||||||||||||||  | | | |||||||||| ||||||||||
Sbjct: 471 aggtttggataaacaaaaagatcaaagaggacagtgccattgtctgggaaatgggcaaat 530

              
Query: 410 gat 412
           |||
Sbjct: 531 gat 533
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  256 bits (129), Expect = 1e-64
 Identities = 225/257 (87%)
 Strand = Plus / Plus

                                                                           
Query: 120     tttcaggatgggtactgaagacactaaagatatgctgaagaatgcggactggaagacagt 179
               |||||||||||| | ||| ||||| ||||||||||||||||||| ||||||||| |||||
Sbjct: 8656437 tttcaggatgggcagtgaggacacaaaagatatgctgaagaatgtggactggaaaacagt 8656496

                                                                           
Query: 180     gagtggtcccgttattaccgagtcaagccagccggttgtcaagaagcgtcttccgaagaa 239
                 ||||| | || |  |||||  ||||||| || ||||| || |||||||| ||||||||
Sbjct: 8656497 tggtggttcggtgagcaccgacccaagccaaccagttgttaaaaagcgtctcccgaagaa 8656556

                                                                           
Query: 240     aatcagacaagtccctgagtgttactttctgcctcgacgatctttgccgtctgcattggc 299
               |||||||||||| ||||| || || ||||||||||| ||||||||||| |||||||||||
Sbjct: 8656557 aatcagacaagttcctgaatgctattttctgcctcggcgatctttgccttctgcattggc 8656616

                                                                           
Query: 300     aatctacggtgctgtttgtgctgctggagttggtgcagggatgttgcttgaggtttggat 359
               |||||| || ||||  ||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 8656617 aatctatggcgctgcgtgtgctgctggagttggcgcagggatgctgcttgaggtttggat 8656676

                                
Query: 360     aaacaaaaagatcaaag 376
               |||||||||||||||||
Sbjct: 8656677 aaacaaaaagatcaaag 8656693
to top
>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0462H08
          Length = 139152

 Score =  256 bits (129), Expect = 1e-64
 Identities = 225/257 (87%)
 Strand = Plus / Plus

                                                                         
Query: 120   tttcaggatgggtactgaagacactaaagatatgctgaagaatgcggactggaagacagt 179
             |||||||||||| | ||| ||||| ||||||||||||||||||| ||||||||| |||||
Sbjct: 88632 tttcaggatgggcagtgaggacacaaaagatatgctgaagaatgtggactggaaaacagt 88691

                                                                         
Query: 180   gagtggtcccgttattaccgagtcaagccagccggttgtcaagaagcgtcttccgaagaa 239
               ||||| | || |  |||||  ||||||| || ||||| || |||||||| ||||||||
Sbjct: 88692 tggtggttcggtgagcaccgacccaagccaaccagttgttaaaaagcgtctcccgaagaa 88751

                                                                         
Query: 240   aatcagacaagtccctgagtgttactttctgcctcgacgatctttgccgtctgcattggc 299
             |||||||||||| ||||| || || ||||||||||| ||||||||||| |||||||||||
Sbjct: 88752 aatcagacaagttcctgaatgctattttctgcctcggcgatctttgccttctgcattggc 88811

                                                                         
Query: 300   aatctacggtgctgtttgtgctgctggagttggtgcagggatgttgcttgaggtttggat 359
             |||||| || ||||  ||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 88812 aatctatggcgctgcgtgtgctgctggagttggcgcagggatgctgcttgaggtttggat 88871

                              
Query: 360   aaacaaaaagatcaaag 376
             |||||||||||||||||
Sbjct: 88872 aaacaaaaagatcaaag 88888
to top
>ref|NM_001063525.1| Oryza sativa (japonica cultivar-group) Os06g0184100 (Os06g0184100)
           mRNA, complete cds
          Length = 665

 Score =  228 bits (115), Expect = 3e-56
 Identities = 231/269 (85%), Gaps = 3/269 (1%)
 Strand = Plus / Plus

                                                                       
Query: 111 cgcaggcagtttcaggatgggtactgaagacactaaagatatgctgaagaatgcggactg 170
           |||||||| |||||||||||| | ||| ||||| ||||||||||||||||||| ||||||
Sbjct: 239 cgcaggcattttcaggatgggcagtgaggacacaaaagatatgctgaagaatgtggactg 298

                                                                       
Query: 171 gaagacagtgagtggtc---ccgttattaccgagtcaagccagccggttgtcaagaagcg 227
           ||| |||||  |||||    | || | ||| ||  ||||||| || ||||| || |||||
Sbjct: 299 gaaaacagttggtggtggttcagtgactactgacccaagccaaccagttgttaaaaagcg 358

                                                                       
Query: 228 tcttccgaagaaaatcagacaagtccctgagtgttactttctgcctcgacgatctttgcc 287
           ||| || |||||||| |||||||| ||||| || || ||||||||||| |||| ||||||
Sbjct: 359 tctcccaaagaaaattagacaagttcctgaatgctattttctgcctcggcgatatttgcc 418

                                                                       
Query: 288 gtctgcattggcaatctacggtgctgtttgtgctgctggagttggtgcagggatgttgct 347
            ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 419 ttctgcattggcaatctatggcgctgtgtgtgctgctggagttggcgcagggatgctgct 478

                                        
Query: 348 tgaggtttggataaacaaaaagatcaaag 376
           |||||||||||||||||||||||||||||
Sbjct: 479 tgaggtttggataaacaaaaagatcaaag 507
to top
>dbj|AK064179.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-B04, full
           insert sequence
          Length = 665

 Score =  228 bits (115), Expect = 3e-56
 Identities = 231/269 (85%), Gaps = 3/269 (1%)
 Strand = Plus / Plus

                                                                       
Query: 111 cgcaggcagtttcaggatgggtactgaagacactaaagatatgctgaagaatgcggactg 170
           |||||||| |||||||||||| | ||| ||||| ||||||||||||||||||| ||||||
Sbjct: 239 cgcaggcattttcaggatgggcagtgaggacacaaaagatatgctgaagaatgtggactg 298

                                                                       
Query: 171 gaagacagtgagtggtc---ccgttattaccgagtcaagccagccggttgtcaagaagcg 227
           ||| |||||  |||||    | || | ||| ||  ||||||| || ||||| || |||||
Sbjct: 299 gaaaacagttggtggtggttcagtgactactgacccaagccaaccagttgttaaaaagcg 358

                                                                       
Query: 228 tcttccgaagaaaatcagacaagtccctgagtgttactttctgcctcgacgatctttgcc 287
           ||| || |||||||| |||||||| ||||| || || ||||||||||| |||| ||||||
Sbjct: 359 tctcccaaagaaaattagacaagttcctgaatgctattttctgcctcggcgatatttgcc 418

                                                                       
Query: 288 gtctgcattggcaatctacggtgctgtttgtgctgctggagttggtgcagggatgttgct 347
            ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 419 ttctgcattggcaatctatggcgctgtgtgtgctgctggagttggcgcagggatgctgct 478

                                        
Query: 348 tgaggtttggataaacaaaaagatcaaag 376
           |||||||||||||||||||||||||||||
Sbjct: 479 tgaggtttggataaacaaaaagatcaaag 507
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  222 bits (112), Expect = 2e-54
 Identities = 228/266 (85%), Gaps = 3/266 (1%)
 Strand = Plus / Minus

                                                                           
Query: 114     aggcagtttcaggatgggtactgaagacactaaagatatgctgaagaatgcggactggaa 173
               ||||| |||||||||||| | ||| ||||| ||||||||||||||||||| |||||||||
Sbjct: 4212490 aggcattttcaggatgggcagtgaggacacaaaagatatgctgaagaatgtggactggaa 4212431

                                                                           
Query: 174     gacagtgagtggtc---ccgttattaccgagtcaagccagccggttgtcaagaagcgtct 230
                |||||  |||||    | || | ||| ||  ||||||| || ||||| || ||||||||
Sbjct: 4212430 aacagttggtggtggttcagtgactactgacccaagccaaccagttgttaaaaagcgtct 4212371

                                                                           
Query: 231     tccgaagaaaatcagacaagtccctgagtgttactttctgcctcgacgatctttgccgtc 290
                || |||||||| |||||||| ||||| || || ||||||||||| |||| |||||| ||
Sbjct: 4212370 cccaaagaaaattagacaagttcctgaatgctattttctgcctcggcgatatttgccttc 4212311

                                                                           
Query: 291     tgcattggcaatctacggtgctgtttgtgctgctggagttggtgcagggatgttgcttga 350
               ||||||||||||||| || ||||| ||||||||||||||||| ||||||||| |||||||
Sbjct: 4212310 tgcattggcaatctatggcgctgtgtgtgctgctggagttggcgcagggatgctgcttga 4212251

                                         
Query: 351     ggtttggataaacaaaaagatcaaag 376
               ||||||||||||||||||||||||||
Sbjct: 4212250 ggtttggataaacaaaaagatcaaag 4212225
to top
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0554A06
          Length = 165311

 Score =  222 bits (112), Expect = 2e-54
 Identities = 228/266 (85%), Gaps = 3/266 (1%)
 Strand = Plus / Minus

                                                                         
Query: 114   aggcagtttcaggatgggtactgaagacactaaagatatgctgaagaatgcggactggaa 173
             ||||| |||||||||||| | ||| ||||| ||||||||||||||||||| |||||||||
Sbjct: 57711 aggcattttcaggatgggcagtgaggacacaaaagatatgctgaagaatgtggactggaa 57652

                                                                         
Query: 174   gacagtgagtggtc---ccgttattaccgagtcaagccagccggttgtcaagaagcgtct 230
              |||||  |||||    | || | ||| ||  ||||||| || ||||| || ||||||||
Sbjct: 57651 aacagttggtggtggttcagtgactactgacccaagccaaccagttgttaaaaagcgtct 57592

                                                                         
Query: 231   tccgaagaaaatcagacaagtccctgagtgttactttctgcctcgacgatctttgccgtc 290
              || |||||||| |||||||| ||||| || || ||||||||||| |||| |||||| ||
Sbjct: 57591 cccaaagaaaattagacaagttcctgaatgctattttctgcctcggcgatatttgccttc 57532

                                                                         
Query: 291   tgcattggcaatctacggtgctgtttgtgctgctggagttggtgcagggatgttgcttga 350
             ||||||||||||||| || ||||| ||||||||||||||||| ||||||||| |||||||
Sbjct: 57531 tgcattggcaatctatggcgctgtgtgtgctgctggagttggcgcagggatgctgcttga 57472

                                       
Query: 351   ggtttggataaacaaaaagatcaaag 376
             ||||||||||||||||||||||||||
Sbjct: 57471 ggtttggataaacaaaaagatcaaag 57446
to top
>ref|NM_001049171.1| Oryza sativa (japonica cultivar-group) Os01g0258600 (Os01g0258600)
           mRNA, complete cds
          Length = 495

 Score =  200 bits (101), Expect = 6e-48
 Identities = 197/229 (86%)
 Strand = Plus / Plus

                                                                       
Query: 123 caggatgggtactgaagacactaaagatatgctgaagaatgcggactggaagacagtgag 182
           ||||||||| | ||| ||||| ||||||||||||||||||| ||||||||| |||||  |
Sbjct: 183 caggatgggcagtgaggacacaaaagatatgctgaagaatgtggactggaaaacagttgg 242

                                                                       
Query: 183 tggtcccgttattaccgagtcaagccagccggttgtcaagaagcgtcttccgaagaaaat 242
           |||| | || |  |||||  ||||||| || ||||| || |||||||| |||||||||||
Sbjct: 243 tggttcggtgagcaccgacccaagccaaccagttgttaaaaagcgtctcccgaagaaaat 302

                                                                       
Query: 243 cagacaagtccctgagtgttactttctgcctcgacgatctttgccgtctgcattggcaat 302
           ||||||||| ||||| || || ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 303 cagacaagttcctgaatgctattttctgcctcggcgatctttgccttctgcattggcaat 362

                                                            
Query: 303 ctacggtgctgtttgtgctgctggagttggtgcagggatgttgcttgag 351
           ||| || ||||  ||||||||||||||||| ||||||||| ||||||||
Sbjct: 363 ctatggcgctgcgtgtgctgctggagttggcgcagggatgctgcttgag 411
to top
>gb|AC174465.2| Medicago truncatula chromosome 2 BAC clone mth2-189f20, complete
             sequence
          Length = 90320

 Score = 50.1 bits (25), Expect = 0.013
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 354   ttggataaacaaaaagatcaaagag 378
             |||||||||||||||||||||||||
Sbjct: 51427 ttggataaacaaaaagatcaaagag 51451
to top
>emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chromosome 1 Contains a
              novel gene, complete sequence
          Length = 203279

 Score = 46.1 bits (23), Expect = 0.21
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 778    tctattttgttttgtttattata 800
              |||||||||||||||||||||||
Sbjct: 156232 tctattttgttttgtttattata 156254
to top
>emb|BX248120.7| Zebrafish DNA sequence from clone CH211-160J6 in linkage group 18,
             complete sequence
          Length = 181815

 Score = 46.1 bits (23), Expect = 0.21
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 773   attgatctattttgttttgtttattat 799
             |||||| ||||||||||||||||||||
Sbjct: 51494 attgatttattttgttttgtttattat 51520
to top
>gb|AC114000.5| Mus musculus BAC clone RP23-161K1 from chromosome 14, complete
            sequence
          Length = 212322

 Score = 44.1 bits (22), Expect = 0.83
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 428  gttggtaacaatctggtttggcagactcac 457
            ||||| ||||||||||||||| ||||||||
Sbjct: 4353 gttggaaacaatctggtttggaagactcac 4324
to top
>gb|AC151835.4| Mus musculus BAC clone RP23-333J1 from chromosome 14, complete sequence
          Length = 215551

 Score = 44.1 bits (22), Expect = 0.83
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 428    gttggtaacaatctggtttggcagactcac 457
              ||||| ||||||||||||||| ||||||||
Sbjct: 124254 gttggaaacaatctggtttggaagactcac 124225
to top
>emb|AL592185.35| Mouse DNA sequence from clone RP23-341J22 on chromosome 11 Contains a
             novel gene, the Nos2 gene for inducible macrophage nitric
             oxide synthase 2 and the 3' end of the Lgals9 gene for
             soluble galactose binding lectin 9, complete sequence
          Length = 178443

 Score = 44.1 bits (22), Expect = 0.83
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 172   aagacagtgagtggtcccgttattac 197
             ||||||||||||||||||| ||||||
Sbjct: 68403 aagacagtgagtggtcccgctattac 68428
to top
>gb|AE014847.1| Plasmodium falciparum 3D7 chromosome 12, section 4 of 9 of the complete
             sequence
          Length = 252650

 Score = 44.1 bits (22), Expect = 0.83
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 780   tattttgttttgtttattataccatgaagt 809
             ||||||||||||||| ||||||| ||||||
Sbjct: 66759 tattttgttttgttttttataccttgaagt 66730
to top
>emb|CU024870.3| Zebrafish DNA sequence from clone CH211-193F12, complete sequence
          Length = 116393

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 831   ttaatctattttgttttgttt 851
             |||||||||||||||||||||
Sbjct: 14104 ttaatctattttgttttgttt 14124
to top
>gb|AC185143.2| Nasonia vitripennis  BAC NV_Bb-44F11 (Clemson University Genomics
             Nasonia vitripennis BAC Library) complete sequence
          Length = 117636

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 780   tattttgttttgtttattata 800
             |||||||||||||||||||||
Sbjct: 48217 tattttgttttgtttattata 48237
to top
>gb|AC134251.3| Mus musculus BAC clone RP23-430D14 from chromosome 3, complete sequence
          Length = 189471

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 780   tattttgttttgtttattata 800
             |||||||||||||||||||||
Sbjct: 89099 tattttgttttgtttattata 89119
to top
>gb|AC127547.2| Mus musculus BAC clone RP24-498C13 from chromosome 8, complete sequence
          Length = 151070

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 825   ccatgattaatctattttgttttgt 849
             ||||||||||| |||||||||||||
Sbjct: 12948 ccatgattaatttattttgttttgt 12924
to top
>gb|AC113123.8| Mus musculus chromosome 8, clone RP23-349O15, complete sequence
          Length = 213829

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 825   ccatgattaatctattttgttttgt 849
             ||||||||||| |||||||||||||
Sbjct: 17975 ccatgattaatttattttgttttgt 17999
to top
>gb|AY222866.1| Schistosoma japonicum clone ZZD1204 mRNA sequence
          Length = 1208

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 780  tattttgttttgtttattata 800
            |||||||||||||||||||||
Sbjct: 1015 tattttgttttgtttattata 1035
to top
>gb|AC157816.4| Mus musculus chromosome 3, clone RP24-255I19, complete sequence
          Length = 204358

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 780   tattttgttttgtttattata 800
             |||||||||||||||||||||
Sbjct: 10344 tattttgttttgtttattata 10364
to top
>gb|AC010483.7| Homo sapiens chromosome 5 clone CTD-2321L15, complete sequence
          Length = 93951

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 781 attttgttttgtttattatac 801
           |||||||||||||||||||||
Sbjct: 80  attttgttttgtttattatac 100
to top
>gb|AC107082.3| Homo sapiens BAC clone RP11-807A15 from 2, complete sequence
          Length = 112944

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 358   ataaacaaaaagatcaaagaggatg 382
             ||||| |||||||||||||||||||
Sbjct: 21456 ataaataaaaagatcaaagaggatg 21480
to top
>gb|AC025475.5| Homo sapiens chromosome 5 clone RP11-351N6, complete sequence
          Length = 186462

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 781    attttgttttgtttattatac 801
              |||||||||||||||||||||
Sbjct: 144455 attttgttttgtttattatac 144475
to top
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 772   gattgatctattttgttttgt 792
             |||||||||||||||||||||
Sbjct: 80378 gattgatctattttgttttgt 80398
to top
>gb|AC102253.9| Mus musculus chromosome 3, clone RP24-175A24, complete sequence
          Length = 156901

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 780   tattttgttttgtttattata 800
             |||||||||||||||||||||
Sbjct: 20809 tattttgttttgtttattata 20829
to top
>ref|XM_447746.1| Candida glabrata CBS138, CAGL0J00781g partial mRNA
          Length = 2601

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 772  gattgatctattttgttttgt 792
            |||||||||||||||||||||
Sbjct: 2216 gattgatctattttgttttgt 2196
to top
>emb|BX088691.4| Zebrafish DNA sequence from clone CH211-210P4 in linkage group 7,
            complete sequence
          Length = 150021

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 831  ttaatctattttgttttgttt 851
            |||||||||||||||||||||
Sbjct: 7023 ttaatctattttgttttgttt 7043
to top
>emb|AL928941.12| Zebrafish DNA sequence from clone CH211-236L14 in linkage group 25,
              complete sequence
          Length = 146652

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 831    ttaatctattttgttttgttt 851
              |||||||||||||||||||||
Sbjct: 136219 ttaatctattttgttttgttt 136239
to top
>emb|AL670290.13| Mouse DNA sequence from clone RP23-309M8 on chromosome 4, complete
             sequence
          Length = 174638

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 705   acaggtaagaacaatctgaaa 725
             |||||||||||||||||||||
Sbjct: 88356 acaggtaagaacaatctgaaa 88336


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 163,404,125
Number of extensions: 10287297
Number of successful extensions: 242101
Number of sequences better than 10.0: 33
Number of HSP's gapped: 242093
Number of HSP's successfully gapped: 38
Length of query: 872
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 850
Effective length of database: 18,508,616,841
Effective search space: 15732324314850
Effective search space used: 15732324314850
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top