| Clone Name | FLbaf47o09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK105392:Os08g0328300 | 32 | 0.38 | 2 | AK102227:Os08g0328300 | 32 | 0.38 | 3 | AK068938:Os03g0355600 | 28 | 5.4 | 4 | Os07g0654400:Os07g0654400 | 28 | 5.4 | 5 | AK108703:Os04g0577700 | 28 | 5.4 | 6 | AK110629:Os04g0103800 | 28 | 9.3 |
|---|
>AK105392:Os08g0328300 | Length = 458 Score = 32.3 bits (72), Expect = 0.38 Identities = 15/54 (27%), Positives = 25/54 (46%) Frame = -1 Query: 642 RYKEFAYTRHKLHQSQISTIHKHHEEEHGPTTDENKREKRTTSILAIQAAGPEP 481 R +E+ T+ L ++ + H+ PTT KR+K + SI + P P Sbjct: 115 RIREWRETKGGLQADMVNNAQRSHDRVPSPTTSARKRQKTSQSIPSASVPVPSP 168
>AK102227:Os08g0328300 | Length = 458 Score = 32.3 bits (72), Expect = 0.38 Identities = 15/54 (27%), Positives = 25/54 (46%) Frame = -1 Query: 642 RYKEFAYTRHKLHQSQISTIHKHHEEEHGPTTDENKREKRTTSILAIQAAGPEP 481 R +E+ T+ L ++ + H+ PTT KR+K + SI + P P Sbjct: 115 RIREWRETKGGLQADMVNNAQRSHDRVPSPTTSARKRQKTSQSIPSASVPVPSP 168
>AK068938:Os03g0355600 | Length = 893 Score = 28.5 bits (62), Expect = 5.4 Identities = 12/24 (50%), Positives = 19/24 (79%) Frame = +3 Query: 234 VST*SLGMKKLVYLYLLHHAEKVP 305 + T +L +KKLVYLYL+++A+ P Sbjct: 57 MQTENLELKKLVYLYLINYAKSQP 80
>Os07g0654400:Os07g0654400 | Length = 1054 Score = 28.5 bits (62), Expect = 5.4 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Frame = +1 Query: 10 RPPKSAPRSFSPSSTGSGMRAVGADAHLYDDLDAVAIPTLLDSRIDGEKVDAQA-PPRPH 186 RP +APRS ST G+RA D AV +P D E A PP PH Sbjct: 169 RPRAAAPRSALARSTFRGVRA--------DATPAVQLPGRRDGADASETTSTDALPPSPH 220
>AK108703:Os04g0577700 | Length = 367 Score = 28.5 bits (62), Expect = 5.4 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +1 Query: 10 RPPKSAPRSFSPSSTGSGMRAVGADAHLYDDLDAVAIPTLLDSRIDGEKVD---AQAPPR 180 R ++ P + + +STG+ + + L+DD DA A DGE+VD + Sbjct: 57 RRARTHPSASASASTGTLTVPSASSSFLWDDADAEA---------DGEEVDFKRESSATT 107 Query: 181 PHLAGLLRR 207 P +GLLR+ Sbjct: 108 PSFSGLLRQ 116
>AK110629:Os04g0103800 | Length = 171 Score = 27.7 bits (60), Expect = 9.3 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +1 Query: 16 PKSAPRSFSPSSTGSGMRAVGADAHLYDDLDAVAIPTLLDSRIDGEKVDAQAPPRP 183 P +AP + P + GS + V A L+DD+ A+ P++ ++ +A P P Sbjct: 7 PPTAPSAPDPRAAGSLLSHVQAVGSLHDDVRALPHPSVAGHDERRRRLQIRALPAP 62 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,458,836 Number of extensions: 330076 Number of successful extensions: 1347 Number of sequences better than 10.0: 8 Number of HSP's gapped: 1347 Number of HSP's successfully gapped: 10 Length of query: 260 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 161 Effective length of database: 11,435,796 Effective search space: 1841163156 Effective search space used: 1841163156 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)