ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf47o09 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g74180:12001.t06698:unspliced-genomic AP3-complex beta-3A adaptin subunit, putative, expressed| Length = 6564 Score = 54.7 bits (113), Expect(3) = 3e-17 Identities = 21/31 (67%), Positives = 25/31 (80%) Frame = +1 / +3 Query: 73 VGADAHLYDDLDAVAIPTLLDSRIDGEKVDA 165 +G DAHLYDD D +IPTLLDSR D +K+DA Sbjct: 123 MGTDAHLYDDPDDASIPTLLDSRFDADKLDA 215 Score = 43.2 bits (88), Expect(3) = 3e-17 Identities = 18/24 (75%), Positives = 22/24 (91%) Frame = +3 / +2 Query: 228 KNVST*SLGMKKLVYLYLLHHAEK 299 KNV++ SL +KKLVYLYLLH+AEK Sbjct: 371 KNVASQSLEVKKLVYLYLLHYAEK 442 Score = 27.6 bits (54), Expect(3) = 3e-17 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 / +3 Query: 164 LKRLLALISRGFYVAH 211 LKRLLALI++G VAH Sbjct: 216 LKRLLALIAQGVDVAH 263 Score = 36.8 bits (74), Expect(3) = 2e-09 Identities = 16/33 (48%), Positives = 23/33 (69%) Frame = -1 / -2 Query: 162 VDLLAVDAGVEERRDGDGVQVVVEMRVRPNRPH 64 V+L+ ++AGVE+ DG V VVVE+ V + PH Sbjct: 212 VELVGIEAGVEQGGDGGVVGVVVEVGVGAHPPH 114 Score = 31.8 bits (63), Expect(3) = 2e-09 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -3 / -2 Query: 226 NLDCPVGDVEAPRDEGEEALE 164 NL VGD++A DEGEEALE Sbjct: 278 NLREEVGDIDALGDEGEEALE 216 Score = 29.9 bits (59), Expect(3) = 2e-09 Identities = 15/24 (62%), Positives = 15/24 (62%) Frame = -3 / -1 Query: 298 FSAWWSR*R*TSFFIPSDYVDTFL 227 FSA W R R*TSF SD TFL Sbjct: 441 FSA*WRRYR*TSFLTSSDCEATFL 370 Score = 29.5 bits (58), Expect(2) = 0.019 Identities = 13/25 (52%), Positives = 19/25 (76%) Frame = -2 / -3 Query: 296 LGMVEQVEVDELLHPKRLCRHVLES 222 L +VE+V +DELL +RL HVL++ Sbjct: 439 LSVVEEV*IDELLDLQRLRGHVLDN 365 Score = 28.1 bits (55), Expect(2) = 0.019 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -1 / -3 Query: 213 RWAT*KPREMRARRRLSVDLLA 148 +WAT P MRARRRL L+ Sbjct: 265 KWATSTPWAMRARRRLRASSLS 200 Score = 26.3 bits (51), Expect(2) = 3.0 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = +1 / +2 Query: 166 QAPPRPHLAGLLRRP 210 QAPPRPH G RP Sbjct: 218 QAPPRPHRPGRRCRP 262 Score = 23.5 bits (45), Expect(2) = 3.0 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +2 / +1 Query: 227 QERVDIVAWDEEARLPLPAP 286 QER +A +EARL +P P Sbjct: 370 QERGLAIAGGQEARLSIPPP 429
>LOC_Os06g43120:12006.t04002:unspliced-genomic zinc finger C-x8-C-x5-C-x3-H type family protein, expressed| Length = 7923 Score = 29.0 bits (57), Expect(2) = 0.046 Identities = 13/62 (20%), Positives = 20/62 (32%) Frame = -1 / +1 Query: 666 TSTCTEKVRYKEFAYTRHKLHQSQISTIHKHHEEEHGPTTDENKREKRTTSILAIQAAGP 487 ++ + Y Y H HQ + H HH H P ++ + A P Sbjct: 103 SAAARSRYEYGGGGYESHSHHQYHLPDHHHHHHHHHPPPRVQHHHHHHHQQLPAPTPPPP 282 Query: 486 EP 481 P Sbjct: 283 PP 288 Score = 27.2 bits (53), Expect(2) = 0.046 Identities = 13/48 (27%), Positives = 17/48 (35%) Frame = -3 / +3 Query: 502 PGCRPGTHPRSXXXXXXXXXXXXXQRARVKQPLPVPATEIPLGRKMTP 359 P P P S A V +P+P P P GR++ P Sbjct: 294 PAAAPPRAPSSSLRLPSPRPSRRLLAAAVPRPVPAPPLPSPRGRRLPP 437
>LOC_Os04g44050:12004.t03944:unspliced-genomic expressed protein| Length = 1292 Score = 36.3 bits (73), Expect = 0.25 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 / -2 Query: 167 KRLLALISRGFYVAHRAVKIQERVDIVAWDEEARLPLPAPPCRESSASVSECK 325 +R LA + VA RA + + A + R P PAPPCR+ ++ C+ Sbjct: 391 RRRLAGLRPRRRVASRAPAVCRHATVAACAQPLRRPPPAPPCRQPPPALMRCR 233
>LOC_Os06g40220:12006.t03718:unspliced-genomic F-box domain containing protein| Length = 2568 Score = 29.0 bits (57), Expect(2) = 0.98 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +1 / +2 Query: 175 PRPHLAGLLRRPPGSQDSRTCRHSR 249 P P G++ RPP S S CR R Sbjct: 476 PAPPRVGVVARPPSSSPSSACRIGR 550 Score = 22.6 bits (43), Expect(2) = 0.98 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +1 / +2 Query: 4 RRRPPKSAPRSFSPSSTGSGMRAVGADA 87 R PP SAP + +ST S A A + Sbjct: 275 RPPPPPSAPPPATAASTTSSTAATAASS 358
>LOC_Os01g03320:12001.t00224:unspliced-genomic Bowman-Birk type bran trypsin inhibitor precursor, putative,| expressed Length = 952 Score = 29.5 bits (58), Expect(2) = 1.0 Identities = 10/31 (32%), Positives = 13/31 (41%) Frame = -1 / +3 Query: 582 HKHHEEEHGPTTDENKREKRTTSILAIQAAG 490 H HH ++H P +R R IQ G Sbjct: 180 HHHHRQQHSPPQQRRRRRNRWKQTGEIQTVG 272 Score = 22.1 bits (42), Expect(2) = 1.0 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -2 / +1 Query: 383 PAWKKNDSVKQ 351 P W+ ND VKQ Sbjct: 316 PRWRCNDEVKQ 348
>LOC_Os07g26770:12007.t02373:unspliced-genomic circumsporozoite protein precursor, putative| Length = 402 Score = 29.0 bits (57), Expect(2) = 1.1 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +1 / -3 Query: 169 APPRPHLAGLLRRPPGSQDSRTCRHSR 249 APP PHL + R P + R RH R Sbjct: 394 APPLPHLPAIPRARPSRRRCRAERHRR 314 Score = 22.6 bits (43), Expect(2) = 1.1 Identities = 11/44 (25%), Positives = 17/44 (38%) Frame = +2 / -2 Query: 266 RLPLPAPPCRESSASVSECKDPCDYVGXXXXXXXXXXKRDLSCR 397 R P P+P +S V + PC + +R +CR Sbjct: 329 RAPSPSPSSPSASRPVPPPRAPCRRLAPRAAAATLSPRRTPACR 198
>LOC_Os05g26914:12005.t02346:unspliced-genomic chaperone protein dnaJ, putative, expressed| Length = 6554 Score = 28.6 bits (56), Expect(2) = 1.2 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +1 / +1 Query: 4 RRRPPKSAPRSFSPSSTGSGMRAVGADAH 90 R PP+S P P ST A GAD H Sbjct: 79 RPPPPQSVPSPRPPPSTPVSSPAAGADLH 165 Score = 22.6 bits (43), Expect(2) = 1.2 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = +1 / +1 Query: 163 AQAPPRPHLAGLLRRPPGSQDS 228 A A P P G RRPP S S Sbjct: 268 ACADPHPASRGGARRPPSSTAS 333
>LOC_Os05g26954:12005.t02349:unspliced-genomic saposin-like type B, region 1 family protein, expressed| Length = 5837 Score = 28.6 bits (56), Expect(2) = 1.2 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +1 / +3 Query: 4 RRRPPKSAPRSFSPSSTGSGMRAVGADAH 90 R PP+S P P ST A GAD H Sbjct: 78 RPPPPQSVPSPRPPPSTPVSSPAAGADLH 164 Score = 22.6 bits (43), Expect(2) = 1.2 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = +1 / +3 Query: 163 AQAPPRPHLAGLLRRPPGSQDS 228 A A P P G RRPP S S Sbjct: 267 ACADPHPASRGGARRPPSSTAS 332
>LOC_Os05g26890:12005.t02344:unspliced-genomic guanine nucleotide-binding protein alpha-1 subunit, putative,| expressed Length = 5797 Score = 28.6 bits (56), Expect(2) = 1.2 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +1 / +3 Query: 4 RRRPPKSAPRSFSPSSTGSGMRAVGADAH 90 R PP+S P P ST A GAD H Sbjct: 63 RPPPPQSVPSPRPPPSTPVSSPAAGADLH 149 Score = 22.6 bits (43), Expect(2) = 1.2 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = +1 / +3 Query: 163 AQAPPRPHLAGLLRRPPGSQDS 228 A A P P G RRPP S S Sbjct: 252 ACADPHPASRGGARRPPSSTAS 317
>LOC_Os08g23930:12008.t02164:unspliced-genomic ENT domain containing protein, expressed| Length = 6373 Score = 34.1 bits (68), Expect = 1.2 Identities = 14/52 (26%), Positives = 24/52 (46%) Frame = -1 / +2 Query: 636 KEFAYTRHKLHQSQISTIHKHHEEEHGPTTDENKREKRTTSILAIQAAGPEP 481 +E+ T+ L ++ + H+ PTT KR+K + SI + P P Sbjct: 1844 REWRETKGGLQADMVNNAQRSHDRVPSPTTSARKRQKTSQSIPSASVPVPSP 1999
>LOC_Os08g30370:12008.t02790:unspliced-genomic expressed protein| Length = 646 Score = 29.0 bits (57), Expect(2) = 1.4 Identities = 11/34 (32%), Positives = 16/34 (47%) Frame = -1 / -1 Query: 582 HKHHEEEHGPTTDENKREKRTTSILAIQAAGPEP 481 H+H E P R +R + ++ AAGP P Sbjct: 475 HRHRMERRAPLPQHRCRCRRAAAAVSPSAAGPPP 374 Score = 22.1 bits (42), Expect(2) = 1.4 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = -1 / -2 Query: 606 HQSQISTIHKHHEEEH 559 HQ I+ I KH EH Sbjct: 600 HQEHINIIFKHIHPEH 553
>LOC_Os01g63100:12001.t05680:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5624 Score = 28.1 bits (55), Expect(2) = 1.7 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = +1 / -2 Query: 181 PHLAGLLRRPPGS 219 PHLAG R PPGS Sbjct: 1237 PHLAGCRREPPGS 1199 Score = 22.6 bits (43), Expect(2) = 1.7 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 / -1 Query: 28 PRSFSPSSTGSGM 66 PRS SPSST S + Sbjct: 1289 PRSSSPSSTSSAV 1251
>LOC_Os04g32730:12004.t02951:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5602 Score = 28.1 bits (55), Expect(2) = 1.7 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = +1 / -1 Query: 181 PHLAGLLRRPPGS 219 PHLAG R PPGS Sbjct: 1576 PHLAGCRREPPGS 1538 Score = 22.6 bits (43), Expect(2) = 1.7 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 / -3 Query: 28 PRSFSPSSTGSGM 66 PRS SPSST S + Sbjct: 1628 PRSSSPSSTSSAV 1590
>LOC_Os01g31629:12001.t02745:unspliced-genomic expressed protein| Length = 16456 Score = 33.6 bits (67), Expect = 1.7 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +2 / +1 Query: 266 RLPLPAPPCRESSASVSEC 322 RLPLP+PPC+ S S++ C Sbjct: 2158 RLPLPSPPCKSQS*SLNAC 2214
>LOC_Os04g39030:12004.t03473:unspliced-genomic peptide transporter PTR2, putative| Length = 4196 Score = 33.6 bits (67), Expect = 1.7 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +1 / -3 Query: 7 RRPPKSAPRSFSPSSTGSGMRAVG 78 RRP S PR+ SP+ TG+G R G Sbjct: 4146 RRPAASPPRAVSPACTGAGSRTPG 4075
>LOC_Os01g46169:12001.t04066:unspliced-genomic carboxylic ester hydrolase/ hydrolase, acting on ester bonds, putative,| expressed Length = 24799 Score = 28.1 bits (55), Expect(2) = 2.0 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +1 / +1 Query: 154 KVDAQAPPRPHLAGLLRRPPGSQDSRTCRHSR 249 ++ A APP P + PP + CRHSR Sbjct: 12601 RLRAAAPPFPCRRAAVPVPPHRRSRAPCRHSR 12696 Score = 22.1 bits (42), Expect(2) = 2.0 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = +2 / +2 Query: 266 RLPLPAPPCRESSASV 313 R PAPPC +A+V Sbjct: 12680 RAATPAPPCATIAAAV 12727
>LOC_Os03g26070:12003.t02301:unspliced-genomic conserved hypothetical protein| Length = 1345 Score = 33.1 bits (66), Expect = 2.3 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = -2 / -1 Query: 386 DPAWKKNDSVKQTNRRSRTGPYIPTRLRNFLGMVEQVEVDELLH 255 D K+N++++ T RRSR + RLR+ ++ Q+ LLH Sbjct: 1270 DEVHKRNNTLRSTRRRSRLAVQLHLRLRSTAAIILQLHPV*LLH 1139
>LOC_Os08g14970:12008.t01371:unspliced-genomic conserved hypothetical protein| Length = 1264 Score = 29.5 bits (58), Expect(2) = 3.1 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +2 / +3 Query: 206 AHRAVKIQERVDIVAWDEEARLPLPAPPCRESSASVSEC 322 AH + R E A PLP PP E SA V C Sbjct: 294 AHLVFSLSGRRRRYLLGEPAASPLPPPPLPERSADVGAC 410 Score = 23.5 bits (45), Expect(2) = 3.1 Identities = 10/18 (55%), Positives = 10/18 (55%) Frame = +3 / +3 Query: 579 YVLY*FDSDVACGECKQI 632 Y LY FDS CG C I Sbjct: 1140 YFLYLFDSVKGCGCCHLI 1193
>LOC_Os12g36980:12012.t03378:unspliced-genomic hypothetical protein| Length = 705 Score = 28.1 bits (55), Expect(2) = 3.3 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +1 / +1 Query: 4 RRRPPKSAPRSFSPSSTG 57 RRRPP+S+P S SS G Sbjct: 283 RRRPPRSSPAPTSSSSRG 336 Score = 24.0 bits (46), Expect(2) = 3.3 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +1 / +1 Query: 187 LAGLLRRPPGSQDSR 231 LAG L++PPG SR Sbjct: 526 LAGALKKPPGKGASR 570
>LOC_Os05g44190:12005.t03908:unspliced-genomic expressed protein| Length = 5007 Score = 32.2 bits (64), Expect = 4.4 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 / +1 Query: 516 TSFSFLVCFRP*SDHALLHDVYVLY*FDS 602 TS +FL+ F D LLH Y++Y FDS Sbjct: 640 TSVNFLIMFSISIDCLLLHPFYIIYRFDS 726
>LOC_Os04g49590:12004.t04473:unspliced-genomic regulatory protein, putative, expressed| Length = 3182 Score = 32.2 bits (64), Expect = 4.4 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = +2 / +1 Query: 263 ARLPLPAPPCRESSASVSECKDPC 334 AR P PP R SS S S C PC Sbjct: 166 ARAPSSEPPRRSSSPSSSRCPSPC 237
>LOC_Os11g36760:12011.t03220:unspliced-genomic conserved hypothetical protein| Length = 2550 Score = 32.2 bits (64), Expect = 4.4 Identities = 17/54 (31%), Positives = 21/54 (38%) Frame = +1 / -3 Query: 139 RIDGEKVDAQAPPRPHLAGLLRRPPGSQDSRTCRHSRLG*RXXXXXXXXXMPRK 300 R G + PPRP G R+PP S +R R G R PR+ Sbjct: 697 RSGGASGSRRPPPRPDQHGTARQPPPSSPARRRRRPSTGGRRTSPTDRRASPRR 536
>LOC_Os11g35060:12011.t03055:unspliced-genomic agenet domain containing protein| Length = 4334 Score = 32.2 bits (64), Expect = 4.4 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +1 / +3 Query: 172 PPRPHLAGLLRRPPGSQDSRTCR 240 PP P + LLRRPP ++ +R CR Sbjct: 357 PPPPPTSPLLRRPPRARPARHCR 425
>LOC_Os11g22580:12011.t01928:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8101 Score = 32.2 bits (64), Expect = 4.4 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +1 / -2 Query: 109 AVAIPTLLDSRIDGEKVDAQAPPRPHLAGLLRRPPGSQDS 228 A A PT+ +R V A+AP RP +AGL RR D+ Sbjct: 570 ASAAPTIAAARCVLATVAARAP*RPLVAGLARRSSAQSDA 451
>LOC_Os09g37540:12009.t03228:unspliced-genomic carboxy-lyase, putative, expressed| Length = 2170 Score = 32.2 bits (64), Expect = 4.4 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +1 / -2 Query: 145 DGEKVDAQAPPRPHLAGLLRRPPGSQ 222 DG VDAQ PR HL LL+RP S+ Sbjct: 885 DGLGVDAQLRPRDHLHHLLQRPVPSR 808
>LOC_Os06g33930:12006.t03089:unspliced-genomic uncharacterized BCR, COG1963 family protein, expressed| Length = 4431 Score = 32.2 bits (64), Expect = 4.4 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +1 / +1 Query: 4 RRRPPKSAPRSFSPSSTGSGMRAVGAD 84 RRRP ++PR SPSS+G+ + A D Sbjct: 220 RRRPRSTSPRRTSPSSSGTRLSACPVD 300
>LOC_Os02g04110:12002.t00310:unspliced-genomic expressed protein| Length = 3853 Score = 28.6 bits (56), Expect(3) = 4.5 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +3 Query: 193 GLLRRPPGSQDSRTCRH 243 GLLR PP + +R CRH Sbjct: 48 GLLRPPPRRRSARPCRH 98 Score = 22.1 bits (42), Expect(3) = 4.5 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +2 / +2 Query: 269 LPLPAPPCRESSA 307 LPLP PP R + A Sbjct: 296 LPLPTPPRRSAPA 334 Score = 22.1 bits (42), Expect(3) = 4.5 Identities = 9/27 (33%), Positives = 12/27 (44%) Frame = +3 / +1 Query: 594 FDSDVACGECKQILYISPFQYMYL*RY 674 FD+ V CG + F +L RY Sbjct: 1444 FDNSVICGHAIHMAIYENFAIKFLSRY 1524
>LOC_Os05g23630:12005.t02020:unspliced-genomic hypothetical protein| Length = 933 Score = 27.2 bits (53), Expect(2) = 4.6 Identities = 12/32 (37%), Positives = 13/32 (40%) Frame = +2 / -2 Query: 251 WDEEARLPLPAPPCRESSASVSECKDPCDYVG 346 WD R P P PP + S S CD G Sbjct: 578 WDPPRRSPPPDPPLHHNRPSPSPPTASCDSPG 483 Score = 22.1 bits (42), Expect(2) = 4.6 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = +1 / -3 Query: 172 PPRPHLAGLLRRPP 213 PPRP L R PP Sbjct: 625 PPRPPLFAAARTPP 584
>LOC_Os01g08440:12001.t00722:unspliced-genomic indole-3-acetate beta-glucosyltransferase, putative, expressed| Length = 1815 Score = 25.4 bits (49), Expect(3) = 5.3 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / -3 Query: 133 DSRIDGEKVDAQAPPRPHLAGL 198 + R DG+ VDA P R H GL Sbjct: 832 EHRPDGDDVDAVLPQRRHGLGL 767 Score = 23.5 bits (45), Expect(3) = 5.3 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +1 / -2 Query: 202 RRPPGSQDSRTCRHSR 249 RRP GS +R RH R Sbjct: 503 RRPAGSSTARRGRHGR 456 Score = 21.7 bits (41), Expect(3) = 5.3 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = +1 / -2 Query: 4 RRRPPKSAPRSFSP 45 RRRPP AP +P Sbjct: 1439 RRRPPPPAPSLSTP 1398
>LOC_Os10g16860:12010.t01248:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5964 Score = 26.3 bits (51), Expect(2) = 5.4 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +1 / -3 Query: 181 PHLAGLLRRPPG 216 PHLAG R PPG Sbjct: 1576 PHLAGCRREPPG 1541 Score = 22.6 bits (43), Expect(2) = 5.4 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 / -2 Query: 28 PRSFSPSSTGSGM 66 PRS SPSST S + Sbjct: 1628 PRSSSPSSTSSAV 1590
>LOC_Os12g21730:12012.t01913:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5962 Score = 26.3 bits (51), Expect(2) = 5.4 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +1 / -1 Query: 181 PHLAGLLRRPPG 216 PHLAG R PPG Sbjct: 1573 PHLAGCRREPPG 1538 Score = 22.6 bits (43), Expect(2) = 5.4 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 / -3 Query: 28 PRSFSPSSTGSGM 66 PRS SPSST S + Sbjct: 1625 PRSSSPSSTSSAV 1587
>LOC_Os10g22550:12010.t01734:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5755 Score = 26.3 bits (51), Expect(2) = 5.4 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +1 / -3 Query: 181 PHLAGLLRRPPG 216 PHLAG R PPG Sbjct: 1574 PHLAGCRREPPG 1539 Score = 22.6 bits (43), Expect(2) = 5.4 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 / -2 Query: 28 PRSFSPSSTGSGM 66 PRS SPSST S + Sbjct: 1626 PRSSSPSSTSSAV 1588
>LOC_Os12g11760:12012.t01050:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5731 Score = 26.3 bits (51), Expect(2) = 5.4 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +1 / -1 Query: 181 PHLAGLLRRPPG 216 PHLAG R PPG Sbjct: 1519 PHLAGCRREPPG 1484 Score = 22.6 bits (43), Expect(2) = 5.4 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 / -3 Query: 28 PRSFSPSSTGSGM 66 PRS SPSST S + Sbjct: 1571 PRSSSPSSTSSAV 1533
>LOC_Os01g17360:12001.t01580:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5677 Score = 26.3 bits (51), Expect(2) = 5.4 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +1 / -3 Query: 181 PHLAGLLRRPPG 216 PHLAG R PPG Sbjct: 1574 PHLAGCRREPPG 1539 Score = 22.6 bits (43), Expect(2) = 5.4 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 / -2 Query: 28 PRSFSPSSTGSGM 66 PRS SPSST S + Sbjct: 1626 PRSSSPSSTSSAV 1588
>LOC_Os11g34600:12011.t03012:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5580 Score = 26.3 bits (51), Expect(2) = 5.4 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +1 / -3 Query: 181 PHLAGLLRRPPG 216 PHLAG R PPG Sbjct: 1576 PHLAGCRREPPG 1541 Score = 22.6 bits (43), Expect(2) = 5.4 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 / -2 Query: 28 PRSFSPSSTGSGM 66 PRS SPSST S + Sbjct: 1628 PRSSSPSSTSSAV 1590
>LOC_Os10g02814:12010.t00170:unspliced-genomic guanyl nucleotide binding protein, putative, expressed| Length = 4758 Score = 25.4 bits (49), Expect(2) = 5.5 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +1 / -1 Query: 166 QAPPRPHLAGLLRRPPGSQDSRTCRHS 246 Q + H+ +R PP S S +C HS Sbjct: 4674 QVLSQQHMHTCIRSPPMSHTSPSCTHS 4594 Score = 23.5 bits (45), Expect(2) = 5.5 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +2 / -3 Query: 275 LPAPPCRESSASVSECKDPCDY 340 LPAPPC A+ S + D+ Sbjct: 4549 LPAPPCERRPATSSRDRHRWDH 4484
>LOC_Os08g40960:12008.t03826:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4739 Score = 26.3 bits (51), Expect(2) = 5.5 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +1 / -2 Query: 181 PHLAGLLRRPPG 216 PHLAG R PPG Sbjct: 1237 PHLAGCRREPPG 1202 Score = 22.6 bits (43), Expect(2) = 5.5 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 / -1 Query: 28 PRSFSPSSTGSGM 66 PRS SPSST S + Sbjct: 1289 PRSSSPSSTSSAV 1251
>LOC_Os09g10910:12009.t00881:unspliced-genomic fiber protein Fb34, putative, expressed| Length = 5414 Score = 31.8 bits (63), Expect = 6.1 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 / +1 Query: 477 GWVPGRQPG*QGWTSFSFLVCF 542 GWVPG P GW F F++C+ Sbjct: 5026 GWVPGPSPILLGWE*FVFVLCW 5091
>LOC_Os05g39800:12005.t03521:unspliced-genomic nodulin-like family protein, expressed| Length = 2478 Score = 31.8 bits (63), Expect = 6.1 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -3 / +2 Query: 565 RAWSDYGRKQTRKENDVHPCYPGCR 491 RAW+ YGR+ R E P P CR Sbjct: 944 RAWTSYGRRSGRTECTTSPPPPTCR 1018
>LOC_Os01g13030:12001.t01168:unspliced-genomic OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed| Length = 4869 Score = 31.8 bits (63), Expect = 6.1 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = -1 / -3 Query: 663 STCTEKVRYKEFAYTRHKLHQSQISTIHKHHEEEH 559 S C EK +K ++R Q +IH HH H Sbjct: 685 SLCKEKKSFKLITHSRSNHTDQQQGSIHHHHHHHH 581
>LOC_Os11g29050:12011.t02513:unspliced-genomic stripe rust resistance protein Yr10, putative, expressed| Length = 4961 Score = 26.3 bits (51), Expect(2) = 7.3 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +2 / -3 Query: 269 LPLPAPPCRESSAS 310 LP PAPPC ++AS Sbjct: 1668 LPAPAPPCLAAAAS 1627 Score = 22.1 bits (42), Expect(2) = 7.3 Identities = 7/14 (50%), Positives = 9/14 (64%) Frame = +1 / -1 Query: 199 LRRPPGSQDSRTCR 240 L PPG + R+CR Sbjct: 1718 LASPPGGRGERSCR 1677
>LOC_Os06g47310:12006.t04417:unspliced-genomic plant-specific domain TIGR01627 family protein, expressed| Length = 1249 Score = 26.7 bits (52), Expect(2) = 7.4 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +2 / -3 Query: 272 PLPAPPCRESSASVSEC 322 P PAPP R +ASV+ C Sbjct: 197 PPPAPPPRADTASVAAC 147 Score = 24.9 bits (48), Expect(2) = 7.4 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +1 / -3 Query: 13 PPKSAPRSFSPSSTGS 60 PP+ +PR +PSST S Sbjct: 896 PPRDSPRRGTPSSTPS 849
>LOC_Os02g03090:12002.t00209:unspliced-genomic expressed protein| Length = 3666 Score = 25.8 bits (50), Expect(2) = 7.5 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = +1 / +2 Query: 139 RIDGEKVDAQAPPRPHLAGLLRRP 210 R D + APP+PHL RRP Sbjct: 140 RPDHHPLRVVAPPQPHLPRRRRRP 211 Score = 22.6 bits (43), Expect(2) = 7.5 Identities = 7/20 (35%), Positives = 12/20 (60%) Frame = +2 / +1 Query: 272 PLPAPPCRESSASVSECKDP 331 P P+PP R S+++ + P Sbjct: 202 PTPSPPWRPSTSTAARSASP 261
>LOC_Os05g34210:12005.t03015:unspliced-genomic expressed protein| Length = 3703 Score = 25.4 bits (49), Expect(2) = 7.5 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = +1 / +1 Query: 163 AQAPPRPHLAGLLRR 207 A APPRPHL L R Sbjct: 892 APAPPRPHLRDPLHR 936 Score = 23.1 bits (44), Expect(2) = 7.5 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 / +3 Query: 1 GRRRPPKSAPRSFSPSST 54 GR PP+SA S +PSS+ Sbjct: 816 GRPAPPESAT*SRTPSSS 869
>LOC_Os12g18090:12012.t01660:unspliced-genomic hypothetical protein| Length = 2717 Score = 24.9 bits (48), Expect(2) = 7.7 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = +1 / -2 Query: 169 APPRPHLAGLLRRP 210 APPR H A LRRP Sbjct: 829 APPRSHDASPLRRP 788 Score = 23.5 bits (45), Expect(2) = 7.7 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 / -1 Query: 1 GRRRPPKSAPRSFSPSSTGSG 63 GRR+PP S P S S G Sbjct: 956 GRRKPPTSPPFPASSSPLSRG 894
>LOC_Os12g32544:12012.t02950:unspliced-genomic expressed protein| Length = 7662 Score = 31.3 bits (62), Expect = 8.3 Identities = 13/18 (72%), Positives = 13/18 (72%) Frame = +2 / +1 Query: 269 LPLPAPPCRESSASVSEC 322 LPLP PP R SSAS S C Sbjct: 37 LPLPLPPPRVSSASPSRC 90
>LOC_Os03g23950:12003.t02090:unspliced-genomic AP-1 complex subunit beta-1, expressed| Length = 6351 Score = 31.3 bits (62), Expect = 8.3 Identities = 12/24 (50%), Positives = 19/24 (79%) Frame = +3 / +3 Query: 234 VST*SLGMKKLVYLYLLHHAEKVP 305 + T +L +KKLVYLYL+++A+ P Sbjct: 1515 MQTENLELKKLVYLYLINYAKSQP 1586
>LOC_Os02g30420:12002.t02735:unspliced-genomic expressed protein| Length = 1303 Score = 31.3 bits (62), Expect = 8.3 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = -2 / -3 Query: 428 TRSRQATFTCTCN*DPAWKKNDSVKQTNRRSRTGPYIP 315 T + A C C AW++ + +T RR R GP P Sbjct: 581 TSATAAEVACACPCRGAWRRRRTEGRTTRRRRGGPRTP 468
>LOC_Os03g48040:12003.t05706:unspliced-genomic ferredoxin-6, chloroplast precursor, putative, expressed| Length = 3046 Score = 31.3 bits (62), Expect = 8.4 Identities = 12/42 (28%), Positives = 23/42 (54%) Frame = +1 / +1 Query: 1 GRRRPPKSAPRSFSPSSTGSGMRAVGADAHLYDDLDAVAIPT 126 GR RPP+ P + SPS+T + + + +H + ++P+ Sbjct: 334 GRTRPPRPLPPTRSPSTTAREVSSTSSSSHRLINTHTPSMPS 459
>LOC_Os02g34900:12002.t03128:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 8074 Score = 31.3 bits (62), Expect = 8.4 Identities = 12/50 (24%), Positives = 27/50 (54%) Frame = +1 / +2 Query: 541 FVRSRTMLFFMMFMYCTDLTLM*LVASVSKFFISHLFSTCTCNDIHSCET 690 F+ S ++F +++ +CT ++*L+ S FF+ ++ + +C T Sbjct: 5582 FLLSYKLVFHLLYSHCTSQIII*LLFSYCAFFVPFTYTNDNIISVCTCIT 5731
>LOC_Os10g01044:12010.t00004:unspliced-genomic tic62 protein, putative, expressed| Length = 12398 Score = 28.6 bits (56), Expect(2) = 9.1 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +1 Query: 7 RRPPKSAPRSFSPSSTG 57 R PP+ PRS PS+TG Sbjct: 8824 REPPQPPPRSLMPSATG 8874 Score = 25.8 bits (50), Expect(2) = 9.1 Identities = 11/19 (57%), Positives = 11/19 (57%) Frame = +2 / +3 Query: 272 PLPAPPCRESSASVSECKD 328 P P PP SSASVS D Sbjct: 11814 PSPTPPSAASSASVSASPD 11870
>LOC_Os10g28470:12010.t02199:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5963 Score = 25.4 bits (49), Expect(2) = 9.6 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 / -2 Query: 181 PHLAGLLRRPPGS 219 P+LAG R PPGS Sbjct: 1576 PYLAGCRREPPGS 1538 Score = 22.6 bits (43), Expect(2) = 9.6 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 / -1 Query: 28 PRSFSPSSTGSGM 66 PRS SPSST S + Sbjct: 1628 PRSSSPSSTSSAV 1590
>LOC_Os12g36550:12012.t03336:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5450 Score = 25.4 bits (49), Expect(2) = 9.7 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +1 / -3 Query: 181 PHLAGLLRRPPG 216 PHLAG R PPG Sbjct: 1071 PHLAGCRRDPPG 1036 Score = 22.6 bits (43), Expect(2) = 9.7 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 / -2 Query: 28 PRSFSPSSTGSGM 66 PRS SPSST S + Sbjct: 1123 PRSSSPSSTSSAV 1085
>LOC_Os06g06280:12006.t00514:unspliced-genomic beta-1,3-galactosyltransferase 6, putative, expressed| Length = 5022 Score = 24.0 bits (46), Expect(2) = 9.8 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +1 / +3 Query: 7 RRPPKSAPRSFSPS 48 RRPP +APRS + S Sbjct: 75 RRPPPAAPRSAASS 116 Score = 24.0 bits (46), Expect(2) = 9.8 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = +1 / +1 Query: 169 APPRPHLAGLLRRPP 213 APP P GLLRR P Sbjct: 100 APPHPLHPGLLRRLP 144 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 227,799,430 Number of extensions: 3291615 Number of successful extensions: 22877 Number of sequences better than 10.0: 54 Length of query: 260 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 211 Effective length of database: 52,856,264 Effective search space: 11152671704 Effective search space used: 11152671704 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
