ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf44p18 |
|---|---|
| Clone Library Name | barley_pub |
>Os07g0163800:Os07g0163800 | Length = 1043 Score = 92.0 bits (227), Expect(2) = 4e-24 Identities = 47/66 (71%), Positives = 52/66 (78%) Frame = +2 Query: 1106 IVNQVDLSHPDAELRLLEVFYHKIYKIFAPTEKIENINDQYWTLRAEEASMARVAYCTVE 1285 I ++V+LSHP+AELRLLEVFYHKIYKIFAP EKIENINDQYWTLRAEE V Sbjct: 864 IKSKVELSHPNAELRLLEVFYHKIYKIFAPNEKIENINDQYWTLRAEE----------VP 913 Query: 1286 EDEKKL 1303 E+EK L Sbjct: 914 EEEKNL 919 Score = 38.5 bits (88), Expect(2) = 4e-24 Identities = 17/22 (77%), Positives = 20/22 (90%) Frame = +3 Query: 1029 QVFVHSIRLPKNSMVGDVLSDV 1094 +V VHSIRLPKNS VGDVL+D+ Sbjct: 843 EVSVHSIRLPKNSTVGDVLNDI 864
>AK067123:Os11g0573000 | Length = 658 Score = 80.1 bits (196), Expect = 4e-15 Identities = 42/63 (66%), Positives = 46/63 (73%) Frame = +2 Query: 1115 QVDLSHPDAELRLLEVFYHKIYKIFAPTEKIENINDQYWTLRAEEASMARVAYCTVEEDE 1294 +V+LS P AELRLLEVFYHKIYKIF EKIENINDQYWTLRAEE + E+E Sbjct: 480 KVELSSPSAELRLLEVFYHKIYKIFPLHEKIENINDQYWTLRAEE----------IPEEE 529 Query: 1295 KKL 1303 K L Sbjct: 530 KNL 532 Score = 35.4 bits (80), Expect = 0.11 Identities = 17/40 (42%), Positives = 26/40 (65%) Frame = +3 Query: 1029 QVFVHSIRLPKNSMVGDVLSDVI*KSLSIKLTCPILMLNL 1148 +V +HSIRLPKNS + DV++D+ ++L+ P L L Sbjct: 456 EVVIHSIRLPKNSTIADVINDL---KTKVELSSPSAELRL 492
>AK059481:Os11g0573000 | Length = 169 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/53 (67%), Positives = 38/53 (71%) Frame = +2 Query: 1145 LRLLEVFYHKIYKIFAPTEKIENINDQYWTLRAEEASMARVAYCTVEEDEKKL 1303 LRLLEVFYHKIYKIF EKIENINDQYWTLRAEE + E+EK L Sbjct: 1 LRLLEVFYHKIYKIFPLHEKIENINDQYWTLRAEE----------IPEEEKNL 43
>AK100242:Os02g0778300 | Length = 346 Score = 48.9 bits (115), Expect = 1e-05 Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 16/66 (24%) Frame = +2 Query: 899 HEAPLYGH*EPRSIVSGTLYCII----------------VVPIKLCSILSLSNSLKCVLP 1030 HEAPL GH EPRSIV GTLYCI+ +VP + +L SN + +L Sbjct: 18 HEAPLSGHREPRSIVGGTLYCILLAGYAAVAVSAPWIFYLVPDMIPPLLCSSNVIILILT 77 Query: 1031 GVCSQY 1048 G+ QY Sbjct: 78 GIFQQY 83
>AK058466:Os02g0778300 | Length = 356 Score = 48.9 bits (115), Expect = 1e-05 Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 16/66 (24%) Frame = +2 Query: 899 HEAPLYGH*EPRSIVSGTLYCII----------------VVPIKLCSILSLSNSLKCVLP 1030 HEAPL GH EPRSIV GTLYCI+ +VP + +L SN + +L Sbjct: 28 HEAPLSGHREPRSIVGGTLYCILLAGYAAVAVSAPWIFYLVPDMIPPLLCSSNVIILILT 87 Query: 1031 GVCSQY 1048 G+ QY Sbjct: 88 GIFQQY 93
>AK068413:Os04g0672800 | Length = 253 Score = 48.1 bits (113), Expect = 2e-05 Identities = 28/47 (59%), Positives = 33/47 (70%) Frame = +1 Query: 199 MPGLAAAEQDAVSLVRRFARALKRRISYLVALLFCHKVSDPAPARVG 339 MPGLAA +QD VSLVRR +RAL RR++ LV LLF HK + A G Sbjct: 1 MPGLAA-DQDTVSLVRRVSRALNRRLTDLVGLLFHHKSAGSLGAVAG 46
>Os01g0771400:Os01g0771400 | Length = 1073 Score = 40.8 bits (94), Expect(2) = 5e-05 Identities = 21/46 (45%), Positives = 33/46 (71%) Frame = +2 Query: 1112 NQVDLSHPDAELRLLEVFYHKIYKIFAPTEKIENINDQYWTLRAEE 1249 ++V+LS+ DAE RL EV+ +KI K++ P+EKI ++N+ L EE Sbjct: 903 SKVELSYSDAEFRLFEVYKNKIRKVYQPSEKI-SVNEFNGLLCVEE 947 Score = 25.0 bits (53), Expect(2) = 5e-05 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +3 Query: 1029 QVFVHSIRLPKNSMVGDVLSDV 1094 +V H IRLPK S + D++ D+ Sbjct: 880 EVSSHFIRLPKGSTMSDLIEDM 901
>AK110445: | Length = 151 Score = 33.5 bits (75), Expect = 0.42 Identities = 15/30 (50%), Positives = 17/30 (56%) Frame = +3 Query: 30 PHQIPSPLDCCMPRH*RQRIWRLPAPLPPP 119 PHQ P PL RH R+ + R P P PPP Sbjct: 26 PHQPPPPLPQSRRRHRRRGVQRTPPPPPPP 55
>Os08g0415600:Os08g0415600 | Length = 694 Score = 33.1 bits (74), Expect = 0.55 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%) Frame = -3 Query: 570 RIQRTPANTQRPAVVPRTTPHLAPDGPE-ISTAIVAELISE--TTAGVQT-ERLSDQPRG 403 RI A+ PA PR +LA PE + I EL+++ T A QT +R S + Sbjct: 258 RIDYGKADEPAPAPAPRAASYLARINPEGLQCPITLELMTDPVTLATGQTYDRASIKRWV 317 Query: 402 GLGRRTHMVSSSKVWTADAAPPHSCRGGVAYLV 304 G RT V+ K+ +AD P + RG V L+ Sbjct: 318 KSGCRTCPVTGEKLRSADVVPNVAVRGIVEQLL 350
>AK109153:Os05g0479900 | Length = 332 Score = 32.3 bits (72), Expect = 0.94 Identities = 36/121 (29%), Positives = 47/121 (38%) Frame = -3 Query: 573 CRIQRTPANTQRPAVVPRTTPHLAPDGPEISTAIVAELISETTAGVQTERLSDQPRGGLG 394 C RTP + P P A EI +A A + S+ ++R +D+ R L Sbjct: 31 CSRCRTPIRGKNPE--PTDEAEYALSRLEILSADTASVFSDEPEDAGSDRRADEVRP-LS 87 Query: 393 RRTHMVSSSKVWTADAAPPHSCRGGVAYLVAEEEGNEVGDPALEGPSEAAHQRDGILLGG 214 RRT SSS WT S A+E G P + PS + Q G GG Sbjct: 88 RRTRRPSSSSDWTTTTDSERSEEAFYTPRNAQE-----GRP-WQSPSPVSSQELGASGGG 141 Query: 213 G 211 G Sbjct: 142 G 142
>AK063596:Os08g0108300 | Length = 342 Score = 27.3 bits (59), Expect(2) = 1.0 Identities = 18/43 (41%), Positives = 21/43 (48%) Frame = +3 Query: 6 PPALLPLTPHQIPSPLDCCMPRH*RQRIWRLPAPLPPPIRQSP 134 PPAL P P + P P P R R PA PPP R++P Sbjct: 91 PPALPPPPPRRAPPPPSMPPPPPPR-RAPPPPATPPPPPRRAP 132 Score = 23.5 bits (49), Expect(2) = 1.0 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +1 Query: 130 PPPT*SSCAPRSPSQTPSPH 189 PPP S AP P +P PH Sbjct: 162 PPPHISPPAPVPPPPSPPPH 181
>AK107969:Os07g0264000 | Length = 89 Score = 31.6 bits (70), Expect = 1.6 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Frame = +3 Query: 36 QIPSPLDCCMPRH*RQRIWRLPAPLPPPIRQSPTHLIILRTAQSE---PDPLP 185 Q SPL C P R P PLPPP+ +P +L T + P P P Sbjct: 7 QTTSPLRCFSPH--RAPAMPYPRPLPPPLHSAPAQRAVLSTPCASAVLPAPAP 57
>AK065057:Os02g0805500 | Length = 477 Score = 31.2 bits (69), Expect = 2.1 Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 9/111 (8%) Frame = -2 Query: 661 RLNTRSTPWTNDWIQVIEKCRLAHPFPSLLSHSTHASEHTETCCSSTDHAASGTRRARNF 482 R++T S P + + + +EK +H F + L+HS + S +AA F Sbjct: 341 RVSTVSDPISATFCEPVEKANTSHSFTAGLAHSVGLRKQPLRVYSMVKYAAIARGDVEIF 400 Query: 481 HRHCRGTH---I*DHRR-----RTNGASIGPT*RGVRAAD-SHGVLLEGVD 356 + R + I DH R G I T G R D S GV LEG+D Sbjct: 401 MKFARAGYKEKIWDHAAGVVIIREAGGVI--TDAGGRPLDFSRGVFLEGLD 449
>Os11g0188900:Os11g0188900 | Length = 117 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 4/37 (10%) Frame = +3 Query: 30 PHQIPSPLDCCMPR----H*RQRIWRLPAPLPPPIRQ 128 PH P P PR H R+ R P PLPPP RQ Sbjct: 20 PHLPPDPRPLGAPRAHHAHGRRPTRRAPPPLPPPCRQ 56
>AK109932:Os04g0428500 | Length = 170 Score = 30.8 bits (68), Expect = 2.7 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Frame = +3 Query: 6 PPALLPLTPHQIPSPLDCCMPRH*RQRIWRLPA--PLPPPIR--QSPTHLIILRTAQSEP 173 PPA L+PH+ P P+ +P R+ P+ P+PPP ++P H + + T + P Sbjct: 28 PPAHR-LSPHRRPPPVPAPLPT---ARLAPSPSLVPVPPPTTCPRAPAHRLSVLTIRLSP 83 Query: 174 DPLPT 188 PL T Sbjct: 84 RPLTT 88
>AK065504:Os02g0244100 | Length = 423 Score = 26.6 bits (57), Expect(2) = 4.6 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = -1 Query: 770 FCTTPSCDARYRGVHTK 720 FC TPS YRGV TK Sbjct: 103 FCKTPSYAVEYRGVKTK 119 Score = 21.9 bits (45), Expect(2) = 4.6 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Frame = -2 Query: 664 NRLNTRSTPWTNDWIQVIEKCRLAHPFPSLLSHSTHASEHTETCCSSTDHAASGTRRARN 485 NR ++ T ++ + C + PS +E CCSS + + S R Sbjct: 156 NRCSSSRTITPTKEVEYRDICSTSFSVPSY-----RCAEQETECCSS-EPSCSAQTSMRP 209 Query: 484 FH-RHCRGTHI 455 FH RH R +I Sbjct: 210 FHSRHNRDDNI 220
>Os04g0111300:Os04g0111300 | Length = 205 Score = 30.0 bits (66), Expect = 4.6 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = -2 Query: 688 LLKPLQAANRLNTRSTPWTNDWIQVIEKCRLAHPFPSLLSHSTH-ASEHTETCCSSTDHA 512 L P + R+ + + W ++ + LAHP S +HST + T S++ + Sbjct: 36 LTTPAPSGRRMQLKCSDWRYSCSRMNPRSGLAHPSASTCAHSTSTGARRTRGSASASPRS 95 Query: 511 ASGTRR 494 A+ RR Sbjct: 96 AAAPRR 101
>Os01g0749100:Os01g0749100 | Length = 713 Score = 30.0 bits (66), Expect = 4.6 Identities = 22/74 (29%), Positives = 29/74 (39%) Frame = -1 Query: 518 PRRIWHQTGPKFPPPLSRNSYLRPPQAYKRSVYRTNLEXXXXXGLTWCPPRRCGRQMPRR 339 P R P PPP R Y PP+A + R +L L PPR Sbjct: 546 PLRARQPPPPPLPPPARRRRYSFPPRA-AAAAARRSLSFLARPPLP-LPPRAANAAAAPS 603 Query: 338 PTRAGAGSLTLWQK 297 P+ G SL+L+ + Sbjct: 604 PSSRGRHSLSLYAR 617 Score = 29.3 bits (64), Expect = 7.9 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Frame = +3 Query: 6 PPALLPLTPHQIPS--PLDCCMPRH*RQRIWRLPAPLPPPIRQSPTHLII--LRTAQSEP 173 PP+L+P + P+ PL R AP PP +RQ P I LR Q P Sbjct: 503 PPSLVPHDARRQPAAPPL--------RAATAGAAAPPPPSVRQQPRRRSISPLRARQPPP 554 Query: 174 DPLP 185 PLP Sbjct: 555 PPLP 558
>AK108864: | Length = 72 Score = 30.0 bits (66), Expect = 4.6 Identities = 8/27 (29%), Positives = 15/27 (55%) Frame = +2 Query: 1355 CWVLLLYICTCRSIMLCTCKIILMCTC 1435 C V+ + +C C + +C C + +C C Sbjct: 19 CCVVCVCVCVCVCVCVCVCVCVCVCAC 45
>Os05g0524800:Os05g0524800 | Length = 300 Score = 28.1 bits (61), Expect(2) = 4.8 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +3 Query: 3 LPPALLPLTPHQIPSPLDCCMPRH*RQRIWRLPAPLPPPIRQSPTH 140 L PA+ TPH P+ +P H + P P P P+ +PTH Sbjct: 9 LSPAIPIKTPHN--HPVQRPLPDHHTIPLAPKPNPRPSPVTTTPTH 52 Score = 20.4 bits (41), Expect(2) = 4.8 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = +2 Query: 200 CRALPPPSKMPSR 238 C L PP +MP R Sbjct: 73 CSCLRPPHRMPRR 85
>Os07g0587100:Os07g0587100 | Length = 458 Score = 29.6 bits (65), Expect = 6.1 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 Query: 226 LARRRQGPALRGGVGRGSG 170 +A RR+GP +RGG G G+G Sbjct: 1 MASRREGPLMRGGAGGGAG 19
>Os07g0528900:Os07g0528900 | Length = 1790 Score = 29.6 bits (65), Expect = 6.1 Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Frame = +1 Query: 127 NPPPT*SSCAPRSPS--QTPSPHRLAMPGLAAAEQDAVSLVRRFARALKRRISYLVALLF 300 N P T SS P Q P R A +E DA+SL+ R YLV ++ Sbjct: 1237 NSPATASSPTTVVPEELQNPQVQRAARIKYTGSEGDAISLIHR---------RYLVLVIL 1287 Query: 301 CHKVSDPAPARVGRR 345 + S PA R G R Sbjct: 1288 SGECSQPAADRGGGR 1302
>Os05g0117300:Os05g0117300 | Length = 195 Score = 29.6 bits (65), Expect = 6.1 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Frame = +3 Query: 3 LPPALLPLTPHQIPSPLDCCMPRH*RQRIWRLPAPL-----PPPIRQSPTHLIILRTAQS 167 LPP ++ P I D + R ++ P P+ PPP +PT +LR + Sbjct: 44 LPPIIITTPPTAISGESDFSVLR----KVPTGPDPITSDPPPPPPPSTPTQFSVLRKVPT 99 Query: 168 EPDPL 182 PDP+ Sbjct: 100 GPDPI 104
>AK106891:Os02g0105300 | Length = 156 Score = 29.6 bits (65), Expect = 6.1 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -3 Query: 315 AYLVAEEEGNEVGDPALEGPSEAAHQRDGIL 223 A LVAEE G E GD +GP A + D ++ Sbjct: 69 AVLVAEEGGGEAGDGVADGPGGVALEADHLV 99
>AK105531:Os06g0704500 | Length = 409 Score = 29.6 bits (65), Expect = 6.1 Identities = 21/61 (34%), Positives = 25/61 (40%) Frame = +3 Query: 6 PPALLPLTPHQIPSPLDCCMPRH*RQRIWRLPAPLPPPIRQSPTHLIILRTAQSEPDPLP 185 P PL PH+ P +P H R R P PPP +P+HL P P P Sbjct: 243 PGGRTPLAPHRSP------LPHHMPPR--RTPPTPPPPSSPTPSHL---------PPPPP 285 Query: 186 T 188 T Sbjct: 286 T 286
>Os08g0223700:Os08g0223700 | Length = 1424 Score = 29.3 bits (64), Expect = 7.9 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +3 Query: 3 LPPALLPLTPHQI-PSPLDCCMPRH*RQRIWRLPAPLPPPIRQS 131 LPP L+P +P + P+P P H + + PAPLPPP R+S Sbjct: 52 LPPELMPPSPPKASPTPPPQPQP-HPQLQPPPPPAPLPPPSRRS 94
>Os04g0476000:Os04g0476000 | Length = 475 Score = 29.3 bits (64), Expect = 7.9 Identities = 21/63 (33%), Positives = 24/63 (38%), Gaps = 8/63 (12%) Frame = +3 Query: 21 PLTPHQIPSPLDCCMPRH*R--------QRIWRLPAPLPPPIRQSPTHLIILRTAQSEPD 176 PL PH PL +PR R R W P P PPP P + S+P Sbjct: 73 PLCPHNPSRPL--LLPRPTRIAFAMDAASRTWPPPTPSPPPFSSRPRVVGPPPPPPSDPP 130 Query: 177 PLP 185 P P Sbjct: 131 PPP 133
>AK107220: | Length = 659 Score = 29.3 bits (64), Expect = 7.9 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = +2 Query: 566 MRQQRWEGMSKPALLDDLNPIVCPWSGSSVEPIGCLQWLKKLHCLSAIVI*IL 724 M Q+R M+ +L+ L P + P +G + +W+ C++AIVI I+ Sbjct: 336 MPQERGRAMALYSLMPLLGPAIGPIAGGFIAEYSDWRWVFYSTCIAAIVIQIM 388
>AK100610:Os08g0280200 | Length = 893 Score = 29.3 bits (64), Expect = 7.9 Identities = 33/126 (26%), Positives = 42/126 (33%), Gaps = 11/126 (8%) Frame = +3 Query: 87 IWRLPAPLPPPIR--QSPTHLIILRTAQSEPDPLPTXXXXXXXXXXXXXXXXXXXXXXSG 260 ++R PAP PPP++ +P + A P P PT S Sbjct: 260 LFRPPAPPPPPLQSPSTPRCSPVRTLASPPPPPAPTSSPVRMSGPPPPPPPPAPNSCPSR 319 Query: 261 PQAXXXXXXXXXXXXQGKR---PRPC-----TSGAARHLPSTPSRRTPCESAALT-PL*V 413 P R P PC TS AR +P P + S+A T PL Sbjct: 320 PAPPPPPPPPLASTSSPPRPAAPSPCQLHTSTSSPARPVPPPPPTLSTIRSSAPTPPLLP 379 Query: 414 GPIDAP 431 G AP Sbjct: 380 GATSAP 385
>AK072007:Os11g0549700 | Length = 479 Score = 29.3 bits (64), Expect = 7.9 Identities = 13/51 (25%), Positives = 22/51 (43%) Frame = -2 Query: 685 LKPLQAANRLNTRSTPWTNDWIQVIEKCRLAHPFPSLLSHSTHASEHTETC 533 L P + ++ S+ WT +W Q+ C++ P S+H TC Sbjct: 278 LDPKEPLMEIDLNSSAWTGNWSQLCPTCKIIRPM---------RSKHCPTC 319
>AK069036:Os08g0280200 | Length = 658 Score = 29.3 bits (64), Expect = 7.9 Identities = 33/126 (26%), Positives = 42/126 (33%), Gaps = 11/126 (8%) Frame = +3 Query: 87 IWRLPAPLPPPIR--QSPTHLIILRTAQSEPDPLPTXXXXXXXXXXXXXXXXXXXXXXSG 260 ++R PAP PPP++ +P + A P P PT S Sbjct: 25 LFRPPAPPPPPLQSPSTPRCSPVRTLASPPPPPAPTSSPVRMSGPPPPPPPPAPNSCPSR 84 Query: 261 PQAXXXXXXXXXXXXQGKR---PRPC-----TSGAARHLPSTPSRRTPCESAALT-PL*V 413 P R P PC TS AR +P P + S+A T PL Sbjct: 85 PAPPPPPPPPLASTSSPPRPAAPSPCQLHTSTSSPARPVPPPPPTLSTIRSSAPTPPLLP 144 Query: 414 GPIDAP 431 G AP Sbjct: 145 GATSAP 150 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 46,847,902 Number of extensions: 1192679 Number of successful extensions: 5020 Number of sequences better than 10.0: 31 Number of HSP's gapped: 4989 Number of HSP's successfully gapped: 38 Length of query: 515 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 410 Effective length of database: 11,195,550 Effective search space: 4590175500 Effective search space used: 4590175500 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
