ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf44p18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O14029:SEC16_SCHPO Multidomain vesicle coat protein - Schizosacc... 35 0.65
2Q9Y6S9:RPKL1_HUMAN Ribosomal protein S6 kinase-like 1 - Homo sap... 33 2.5
3P10667:MUA1_XENLA Integumentary mucin A.1 precursor - Xenopus la... 33 2.5
4Q96N68:CR015_HUMAN Uncharacterized protein C18orf15 - Homo sapie... 33 3.2
5P98094:CO3_EPTBU Complement C3 [Contains: Complement C3 beta cha... 33 4.2
6Q8TCZ9:PKHD1_HUMAN Polycystic kidney and hepatic disease 1 precu... 29 5.1
7Q9PDD9:TRMU_XYLFA Probable tRNA - Xylella fastidiosa 32 7.2
8Q9BXK1:KLF16_HUMAN Krueppel-like factor 16 - Homo sapiens (Human) 32 7.2
9Q9UTT1:UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 - Sc... 32 9.4

>O14029:SEC16_SCHPO Multidomain vesicle coat protein - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 1995
 Score = 35.4 bits (80), Expect = 0.65
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -2

Query: 1528 GDKLYISFQ*HIR*N--TIYHPPTPPHIKVQGLTSAHQNNFTSAQHNTSASANVQKKDPT 1355
            GD+ Y S Q  I  N  TI  PP+P   K++  TS      T++Q+N +     Q  D  
Sbjct: 167  GDENYSSSQKEIYDNDETIPKPPSPEVEKIETSTSVENAYITNSQYNDTLDMEDQTSDLI 226

Query: 1354 STQSHIKRDRE 1322
            +T  H   D E
Sbjct: 227  TTFEHENEDHE 237



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>Q9Y6S9:RPKL1_HUMAN Ribosomal protein S6 kinase-like 1 - Homo sapiens (Human)|
          Length = 549

 Score = 33.5 bits (75), Expect = 2.5
 Identities = 33/107 (30%), Positives = 45/107 (42%)
 Frame = -3

Query: 525 PRTTPHLAPDGPEISTAIVAELISETTAGVQTERLSDQPRGGLGRRTHMVSSSKVWTADA 346
           PRT+P+L   G   ST    E   E TA   T   SD P+   G   H+ +      +DA
Sbjct: 281 PRTSPNLLLAGEAPSTRPQREAEGEPTARTSTSGSSDLPKAP-GGHLHLQARRAGQNSDA 339

Query: 345 APPHSCRGGVAYLVAEEEGNEVGDPALEGPSEAAHQRDGILLGGGKA 205
            PP     G+ + V E  G  +G     G  ++    DG   G G+A
Sbjct: 340 GPPR----GLTW-VPEGAGPVLGGCG-RGMDQSCLSADGAGRGCGRA 380



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>P10667:MUA1_XENLA Integumentary mucin A.1 precursor - Xenopus laevis (African clawed|
           frog)
          Length = 400

 Score = 33.5 bits (75), Expect = 2.5
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -3

Query: 567 IQRTPANTQRPAVVPRT--TPHLAPDGPEISTAIVAELISETTAGVQTERLSD 415
           +  TP  T  P   P T  TP   P  PE +T    E  +ETT    TE  ++
Sbjct: 244 VPTTPETTTEPTTTPTTDTTPPTLPPTPETTTETTTETTTETTTETTTETTTE 296



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>Q96N68:CR015_HUMAN Uncharacterized protein C18orf15 - Homo sapiens (Human)|
          Length = 181

 Score = 33.1 bits (74), Expect = 3.2
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 1346 LCTCWVLLLYICTCRSIMLCTCKIILMCTC 1435
            +C C  + +++C C  + +C C ++ MC C
Sbjct: 129  MCACMCVCVHVCAC--VYVCMCVLVCMCAC 156



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>P98094:CO3_EPTBU Complement C3 [Contains: Complement C3 beta chain; Complement C3|
            alpha chain; C3a anaphylatoxin; Complement C3 gamma
            chain] - Eptatretus burgeri (Inshore hagfish)
          Length = 1620

 Score = 32.7 bits (73), Expect = 4.2
 Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
 Frame = -3

Query: 543  QRPAVVPRTTPHLAPDGPEISTAI------VAELISETTAGVQTERLSDQPRGGLGRRTH 382
            Q+  VV   TP     G E+S  +      VAE I  T  G +   L   PR G G +  
Sbjct: 917  QQVIVVDNETPQNVVPGTEMSAFLSAQGNLVAETIQNTLKGSKISNLLRLPR-GCGEQNM 975

Query: 381  MVSSSKVWTADAAPPHSCRGGVAYLVAEEEGNEVGDPALE 262
            M +S  V  A             YL   ++ N++GDP L+
Sbjct: 976  MYTSITVMVA------------RYLNRSDQWNKMGDPQLK 1003



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>Q8TCZ9:PKHD1_HUMAN Polycystic kidney and hepatic disease 1 precursor - Homo sapiens|
            (Human)
          Length = 4074

 Score = 28.9 bits (63), Expect(2) = 5.1
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -3

Query: 306  VAEEEGNEVGDPALEGPSEAAHQRDGILLGGGKARHCEAVWGGGLARTA 160
            VA  + N+V D  L G   A  +R G  + G K   CE +W   +A ++
Sbjct: 3078 VAGIKVNQVKDINLHGNVVAGSERLGFHIRGHKCSSCELLWSDNVAHSS 3126



 Score = 21.9 bits (45), Expect(2) = 5.1
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 403  GVRAADSHGVLL 368
            G+ AA SHGVLL
Sbjct: 3027 GIHAAASHGVLL 3038



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>Q9PDD9:TRMU_XYLFA Probable tRNA - Xylella fastidiosa|
          Length = 379

 Score = 32.0 bits (71), Expect = 7.2
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 1143 NLDCLKYSTTKYTRFLHPLKR*KTSTISTGHYVQRRRQWQEWHIVQ 1280
            N D L     K+  FL   +     +I+TGHY + +   Q WH+++
Sbjct: 94   NPDVLCNREIKFKHFLETARELGADSIATGHYARIKHYRQRWHLLR 139



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>Q9BXK1:KLF16_HUMAN Krueppel-like factor 16 - Homo sapiens (Human)|
          Length = 252

 Score = 32.0 bits (71), Expect = 7.2
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
 Frame = -2

Query: 709 NCAEAVQLLKPLQAANRLNTRSTPWTNDWIQVIEKCRLAHPFPSLLSHSTHASEHTETC- 533
           +CA+A      L++  R +T   P+  DW Q  +K + A        H TH  E   +C 
Sbjct: 133 DCAKAYYKSSHLKSHLRTHTGERPFACDW-QGCDK-KFARSDELARHHRTHTGEKRFSCP 190

Query: 532 -CSS----TDHAASGTRRARNFH 479
            CS     +DH A   RR   FH
Sbjct: 191 LCSKRFTRSDHLAKHARRHPGFH 213



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>Q9UTT1:UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 - Schizosaccharomyces pombe|
            (Fission yeast)
          Length = 1129

 Score = 31.6 bits (70), Expect = 9.4
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +2

Query: 1097 MKVIVNQVDLSHPDAE-LRLLEVFYHKIYKIFAPTEKIENIND 1222
            ++ +  +V L+  DA  LRL EV+ H+I K   PT+ I ++N+
Sbjct: 957  LRQVTQKVPLNAEDASRLRLYEVYNHRILKSHLPTDGIYDLNE 999


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 275,571,755
Number of extensions: 6366991
Number of successful extensions: 18393
Number of sequences better than 10.0: 9
Number of HSP's gapped: 18343
Number of HSP's successfully gapped: 10
Length of query: 515
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 397
Effective length of database: 68,319,629
Effective search space: 27122892713
Effective search space used: 27122892713
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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