| Clone Name | FLbaf44p18 |
|---|---|
| Clone Library Name | barley_pub |
>O14029:SEC16_SCHPO Multidomain vesicle coat protein - Schizosaccharomyces pombe (Fission| yeast) Length = 1995 Score = 35.4 bits (80), Expect = 0.65 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = -2 Query: 1528 GDKLYISFQ*HIR*N--TIYHPPTPPHIKVQGLTSAHQNNFTSAQHNTSASANVQKKDPT 1355 GD+ Y S Q I N TI PP+P K++ TS T++Q+N + Q D Sbjct: 167 GDENYSSSQKEIYDNDETIPKPPSPEVEKIETSTSVENAYITNSQYNDTLDMEDQTSDLI 226 Query: 1354 STQSHIKRDRE 1322 +T H D E Sbjct: 227 TTFEHENEDHE 237
>Q9Y6S9:RPKL1_HUMAN Ribosomal protein S6 kinase-like 1 - Homo sapiens (Human)| Length = 549 Score = 33.5 bits (75), Expect = 2.5 Identities = 33/107 (30%), Positives = 45/107 (42%) Frame = -3 Query: 525 PRTTPHLAPDGPEISTAIVAELISETTAGVQTERLSDQPRGGLGRRTHMVSSSKVWTADA 346 PRT+P+L G ST E E TA T SD P+ G H+ + +DA Sbjct: 281 PRTSPNLLLAGEAPSTRPQREAEGEPTARTSTSGSSDLPKAP-GGHLHLQARRAGQNSDA 339 Query: 345 APPHSCRGGVAYLVAEEEGNEVGDPALEGPSEAAHQRDGILLGGGKA 205 PP G+ + V E G +G G ++ DG G G+A Sbjct: 340 GPPR----GLTW-VPEGAGPVLGGCG-RGMDQSCLSADGAGRGCGRA 380
>P10667:MUA1_XENLA Integumentary mucin A.1 precursor - Xenopus laevis (African clawed| frog) Length = 400 Score = 33.5 bits (75), Expect = 2.5 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Frame = -3 Query: 567 IQRTPANTQRPAVVPRT--TPHLAPDGPEISTAIVAELISETTAGVQTERLSD 415 + TP T P P T TP P PE +T E +ETT TE ++ Sbjct: 244 VPTTPETTTEPTTTPTTDTTPPTLPPTPETTTETTTETTTETTTETTTETTTE 296
>Q96N68:CR015_HUMAN Uncharacterized protein C18orf15 - Homo sapiens (Human)| Length = 181 Score = 33.1 bits (74), Expect = 3.2 Identities = 9/30 (30%), Positives = 18/30 (60%) Frame = +2 Query: 1346 LCTCWVLLLYICTCRSIMLCTCKIILMCTC 1435 +C C + +++C C + +C C ++ MC C Sbjct: 129 MCACMCVCVHVCAC--VYVCMCVLVCMCAC 156
>P98094:CO3_EPTBU Complement C3 [Contains: Complement C3 beta chain; Complement C3| alpha chain; C3a anaphylatoxin; Complement C3 gamma chain] - Eptatretus burgeri (Inshore hagfish) Length = 1620 Score = 32.7 bits (73), Expect = 4.2 Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 6/100 (6%) Frame = -3 Query: 543 QRPAVVPRTTPHLAPDGPEISTAI------VAELISETTAGVQTERLSDQPRGGLGRRTH 382 Q+ VV TP G E+S + VAE I T G + L PR G G + Sbjct: 917 QQVIVVDNETPQNVVPGTEMSAFLSAQGNLVAETIQNTLKGSKISNLLRLPR-GCGEQNM 975 Query: 381 MVSSSKVWTADAAPPHSCRGGVAYLVAEEEGNEVGDPALE 262 M +S V A YL ++ N++GDP L+ Sbjct: 976 MYTSITVMVA------------RYLNRSDQWNKMGDPQLK 1003
>Q8TCZ9:PKHD1_HUMAN Polycystic kidney and hepatic disease 1 precursor - Homo sapiens| (Human) Length = 4074 Score = 28.9 bits (63), Expect(2) = 5.1 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = -3 Query: 306 VAEEEGNEVGDPALEGPSEAAHQRDGILLGGGKARHCEAVWGGGLARTA 160 VA + N+V D L G A +R G + G K CE +W +A ++ Sbjct: 3078 VAGIKVNQVKDINLHGNVVAGSERLGFHIRGHKCSSCELLWSDNVAHSS 3126 Score = 21.9 bits (45), Expect(2) = 5.1 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = -2 Query: 403 GVRAADSHGVLL 368 G+ AA SHGVLL Sbjct: 3027 GIHAAASHGVLL 3038
>Q9PDD9:TRMU_XYLFA Probable tRNA - Xylella fastidiosa| Length = 379 Score = 32.0 bits (71), Expect = 7.2 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +3 Query: 1143 NLDCLKYSTTKYTRFLHPLKR*KTSTISTGHYVQRRRQWQEWHIVQ 1280 N D L K+ FL + +I+TGHY + + Q WH+++ Sbjct: 94 NPDVLCNREIKFKHFLETARELGADSIATGHYARIKHYRQRWHLLR 139
>Q9BXK1:KLF16_HUMAN Krueppel-like factor 16 - Homo sapiens (Human)| Length = 252 Score = 32.0 bits (71), Expect = 7.2 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Frame = -2 Query: 709 NCAEAVQLLKPLQAANRLNTRSTPWTNDWIQVIEKCRLAHPFPSLLSHSTHASEHTETC- 533 +CA+A L++ R +T P+ DW Q +K + A H TH E +C Sbjct: 133 DCAKAYYKSSHLKSHLRTHTGERPFACDW-QGCDK-KFARSDELARHHRTHTGEKRFSCP 190 Query: 532 -CSS----TDHAASGTRRARNFH 479 CS +DH A RR FH Sbjct: 191 LCSKRFTRSDHLAKHARRHPGFH 213
>Q9UTT1:UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 - Schizosaccharomyces pombe| (Fission yeast) Length = 1129 Score = 31.6 bits (70), Expect = 9.4 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +2 Query: 1097 MKVIVNQVDLSHPDAE-LRLLEVFYHKIYKIFAPTEKIENIND 1222 ++ + +V L+ DA LRL EV+ H+I K PT+ I ++N+ Sbjct: 957 LRQVTQKVPLNAEDASRLRLYEVYNHRILKSHLPTDGIYDLNE 999 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 275,571,755 Number of extensions: 6366991 Number of successful extensions: 18393 Number of sequences better than 10.0: 9 Number of HSP's gapped: 18343 Number of HSP's successfully gapped: 10 Length of query: 515 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 397 Effective length of database: 68,319,629 Effective search space: 27122892713 Effective search space used: 27122892713 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)