Clone Name	FLbaf44p18
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK241926.1| Oryza sativa (japonica cultivar-group) cDNA, clo...	145	5e-31
2	ref|NM_001065489.1| Oryza sativa (japonica cultivar-group) Os07g...	145	5e-31
3	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	98	1e-16
4	dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic D...	98	1e-16
5	gb|DQ119301.1| Oryza sativa (indica cultivar-group) putative ubi...	98	1e-16
6	emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...	74	2e-09
7	emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clon...	74	2e-09
8	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	74	2e-09
9	ref|NM_001074661.1| Oryza sativa (japonica cultivar-group) Os11g...	72	7e-09
10	dbj|AK067123.1| Oryza sativa (japonica cultivar-group) cDNA clon...	72	7e-09
11	dbj|AK059481.1| Oryza sativa (japonica cultivar-group) cDNA clon...	72	7e-09
12	gb|BT016292.1| Zea mays clone Contig125 mRNA sequence	70	3e-08
13	gb|AY104649.1| Zea mays PCO133877 mRNA sequence	70	3e-08
14	emb|CT829411.1| Oryza sativa (indica cultivar-group) cDNA clone:...	66	4e-07
15	ref|NM_001060763.1| Oryza sativa (japonica cultivar-group) Os04g...	66	4e-07
16	dbj|AK068413.1| Oryza sativa (japonica cultivar-group) cDNA clon...	66	4e-07
17	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	64	2e-06
18	emb|CR936945.2| Medicago truncatula chromosome 5 clone mte1-67e6...	64	2e-06
19	emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb...	64	2e-06
20	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	60	3e-05
21	dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D...	60	3e-05
22	dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic D...	60	3e-05
23	dbj|AK100242.1| Oryza sativa (japonica cultivar-group) cDNA clon...	60	3e-05
24	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	58	1e-04
25	gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome...	58	1e-04
26	ref|NM_001054829.1| Oryza sativa (japonica cultivar-group) Os02g...	56	4e-04
27	dbj|AK058466.1| Oryza sativa (japonica cultivar-group) cDNA clon...	56	4e-04
28	dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone...	52	0.006
29	ref|NM_120743.2| Arabidopsis thaliana UBP12 (UBIQUITIN-SPECIFIC ...	46	0.38
30	ref|NM_180452.1| Arabidopsis thaliana UBP12 (UBIQUITIN-SPECIFIC ...	46	0.38
31	ref|XM_503604.1| Yarrowia lipolytica CLIB122, YALI0E05863g predi...	46	0.38
32	gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC...	46	0.38
33	gb|AY142616.1| Arabidopsis thaliana putative ubiquitin-specific ...	46	0.38
34	gb|AF360198.1| Arabidopsis thaliana putative ubiquitin-specific ...	46	0.38
35	gb|AF302663.1|AF302663 Arabidopsis thaliana ubiquitin-specific p...	46	0.38
36	ref|XM_957839.1| Neurospora crassa OR74A hypothetical protein (N...	46	0.38
37	emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ...	46	0.38
38	emb|BX936352.19| Zebrafish DNA sequence from clone DKEY-37I13 in...	44	1.5
39	gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s...	44	1.5
40	ref|NM_112024.3| Arabidopsis thaliana cysteine-type endopeptidas...	44	1.5
41	gb|AC122252.4| Mus musculus BAC clone RP23-170E7 from chromosome...	44	1.5
42	gb|AC123675.7| Mus musculus chromosome 15, clone RP23-271I6, com...	44	1.5
43	gb|AC069564.34| Mus musculus strain C57BL/6J chromosome 17 clone...	44	1.5
44	gb|AY064010.1| Arabidopsis thaliana At3g11910 mRNA sequence	44	1.5
45	gb|AC010068.8| Drosophila melanogaster 3L BAC RP98-15K24 (Roswel...	44	1.5
46	emb|AL583783.6| Human DNA sequence from clone RP11-75N6 on chrom...	44	1.5
47	gb|AC002470.17| Homo sapiens Chromosome 22q11.2 BAC Clone b135h6...	44	1.5
48	gb|BT002760.1| Arabidopsis thaliana clone C105177 putative ubiqu...	44	1.5
49	dbj|AP000848.5| Homo sapiens genomic DNA, chromosome 11 clone:RP...	44	1.5
50	gb|AY111375.1| Zea mays CL38709_1 mRNA sequence	44	1.5
51	gb|AC188772.2| Gallus gallus BAC clone CH261-135E23 from chromos...	42	5.9
52	gb|AC187515.2| Gallus gallus BAC clone CH261-9P15 from chromosom...	42	5.9
53	gb|CP000383.1| Cytophaga hutchinsonii ATCC 33406, complete genome	42	5.9
54	gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome	42	5.9
55	gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosom...	42	5.9
56	gb|AC125403.4| Mus musculus BAC clone RP23-4E15 from 1, complete...	42	5.9
57	gb|AC138664.17| Mus musculus chromosome 3, clone RP24-289J19, co...	42	5.9
58	gb|AC009773.27| Homo sapiens 12 BAC RP11-82C23 (Roswell Park Can...	42	5.9
59	emb|CT025158.5| Mouse DNA sequence from clone RP23-178N11 on chr...	42	5.9
60	gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, comple...	42	5.9
61	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	42	5.9
62	gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, com...	42	5.9
63	emb|AL365254.14| Human DNA sequence from clone RP11-420H21 on ch...	42	5.9
64	emb|AL022400.8|HS809F4 Human DNA sequence from clone RP4-809F4 o...	42	5.9
65	emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete g...	42	5.9
66	emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ...	42	5.9
67	emb|BX640427.1| Bordetella parapertussis strain 12822, complete ...	42	5.9
68	emb|BX640415.1| Bordetella pertussis strain Tohama I, complete g...	42	5.9
69	emb|BX571864.1| Photorhabdus luminescens subsp. laumondii TTO1 c...	42	5.9
70	dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic D...	42	5.9
71	dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic D...	42	5.9
72	gb|AC016412.12| Homo sapiens chromosome 8, clone RP11-9B18, comp...	42	5.9
73	dbj|BS000189.1| Pan troglodytes chromosome 22 clone:PTB-016G16, ...	42	5.9
74	gb|AY190962.1| Drosophila willistoni clone DWIF01_6_P12 (D1474) ...	42	5.9
75	emb|AL929208.9| Zebrafish DNA sequence from clone DKEY-56P7 in l...	42	5.9
76	gb|AC102548.11| Mus musculus chromosome 19, clone RP23-135H14, c...	42	5.9
77	emb|AL844548.7| Mouse DNA sequence from clone RP23-263D22 on chr...	42	5.9
78	gb|AC133166.2| Mus musculus BAC clone RP24-186D13 from 1, comple...	42	5.9
79	ref|XM_763960.1| Giardia lamblia ATCC 50803 hypothetical protein...	42	5.9
80	emb|AL807399.5| Mouse DNA sequence from clone RP23-382O11 on chr...	42	5.9

---

>dbj|AK241926.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075076O05, full
            insert sequence
          Length = 1362
 Score =  145 bits (73), Expect = 5e-31
 Identities = 118/133 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1118 gttgacctgtcccatcctgatgctgaacttagattgcttgaagtattctaccacaaaata 1177
            ||||| ||||| |||||| ||||||| |||||| | ||||| || ||||| ||||| |||
Sbjct: 370  gttgagctgtctcatcctaatgctgagcttagactacttgaggttttctatcacaagata 429

                                                                        
Query: 1178 tacaagatttttgcacccactgaaaagatagaaaacatcaacgatcagtactggacacta 1237
            ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| || 
Sbjct: 430  tacaagatttttgcaccgaatgaaaagatagaaaacatcaatgatcagtactggaccctg 489

                         
Query: 1238 cgtgcagaggagg 1250
            |||||||||||||
Sbjct: 490  cgtgcagaggagg 502

---

>ref|NM_001065489.1| Oryza sativa (japonica cultivar-group) Os07g0163800 (Os07g0163800)
            mRNA, complete cds
          Length = 3132

 Score =  145 bits (73), Expect = 5e-31
 Identities = 118/133 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1118 gttgacctgtcccatcctgatgctgaacttagattgcttgaagtattctaccacaaaata 1177
            ||||| ||||| |||||| ||||||| |||||| | ||||| || ||||| ||||| |||
Sbjct: 2602 gttgagctgtctcatcctaatgctgagcttagactacttgaggttttctatcacaagata 2661

                                                                        
Query: 1178 tacaagatttttgcacccactgaaaagatagaaaacatcaacgatcagtactggacacta 1237
            ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| || 
Sbjct: 2662 tacaagatttttgcaccgaatgaaaagatagaaaacatcaatgatcagtactggaccctg 2721

                         
Query: 1238 cgtgcagaggagg 1250
            |||||||||||||
Sbjct: 2722 cgtgcagaggagg 2734

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 97.6 bits (49), Expect = 1e-16
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                           
Query: 1182    agatttttgcacccactgaaaagatagaaaacatcaacgatcagtactggacactacgtg 1241
               ||||||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||
Sbjct: 3453500 agatttttgcaccgaatgaaaagatagaaaacatcaatgatcagtactggaccctgcgtg 3453559

                        
Query: 1242    cagaggagg 1250
               |||||||||
Sbjct: 3453560 cagaggagg 3453568



 Score = 50.1 bits (25), Expect = 0.024
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                           
Query: 1021    tgttttaccaggtgtttgttcacagtataagattgccaaaaaatagcatggttggtgatg 1080
               |||||||||||||||  ||||||||||| || |||||||| || ||||  || |||||||
Sbjct: 3453149 tgttttaccaggtgtcagttcacagtattaggttgccaaagaacagcactgtcggtgatg 3453208

                
Query: 1081    t 1081
               |
Sbjct: 3453209 t 3453209

---

>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0428D12
          Length = 141678

 Score = 97.6 bits (49), Expect = 1e-16
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1182  agatttttgcacccactgaaaagatagaaaacatcaacgatcagtactggacactacgtg 1241
             ||||||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||
Sbjct: 93320 agatttttgcaccgaatgaaaagatagaaaacatcaatgatcagtactggaccctgcgtg 93379

                      
Query: 1242  cagaggagg 1250
             |||||||||
Sbjct: 93380 cagaggagg 93388



 Score = 50.1 bits (25), Expect = 0.024
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 1021  tgttttaccaggtgtttgttcacagtataagattgccaaaaaatagcatggttggtgatg 1080
             |||||||||||||||  ||||||||||| || |||||||| || ||||  || |||||||
Sbjct: 92969 tgttttaccaggtgtcagttcacagtattaggttgccaaagaacagcactgtcggtgatg 93028

              
Query: 1081  t 1081
             |
Sbjct: 93029 t 93029

---

>gb|DQ119301.1| Oryza sativa (indica cultivar-group) putative ubiquitin protease
            mRNA, partial cds
          Length = 1593

 Score = 97.6 bits (49), Expect = 1e-16
 Identities = 114/133 (85%), Gaps = 2/133 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1118 gttgacctgtcccatcctgatgctgaacttagattgcttgaagtattctaccacaaaata 1177
            ||||| |||||| ||||||||||||||||  | ||||||||||||||||| ||||| || 
Sbjct: 517  gttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctatcacaagatt 576

                                                                        
Query: 1178 tacaagatttttgcacc-cactgaaaagatagaaaacatcaacgatcagtactggacact 1236
            || ||||| ||| |||| ||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 577  tataagatatttccacctcac-gagaaaatagagaacataaatgatcagtactggacact 635

                         
Query: 1237 acgtgcagaggag 1249
            |||||| ||||||
Sbjct: 636  acgtgctgaggag 648

---

>emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete
             sequence
          Length = 100419

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 99/119 (83%), Gaps = 3/119 (2%)
 Strand = Plus / Plus

                                                                         
Query: 195   cgcaatgccgggccttgccgccgccgagcaagatgccgtctcgctggtgcgccgcttcgc 254
             |||||||||||||||   ||||||||| || ||  |||||||||||||||||||| || |
Sbjct: 56999 cgcaatgccgggcct---cgccgccgaccaggacaccgtctcgctggtgcgccgcgtctc 57055

                                                                        
Query: 255   tcgggccctcaagcgccggatctcctacctcgttgccctcctcttctgccacaaggtaa 313
              || |||||||| |||||  || || ||||||| | ||||||||||  |||||||||||
Sbjct: 57056 ccgcgccctcaaccgccgcctcaccgacctcgtcggcctcctcttccaccacaaggtaa 57114

---

>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17,
             complete sequence
          Length = 159894

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 99/119 (83%), Gaps = 3/119 (2%)
 Strand = Plus / Plus

                                                                         
Query: 195   cgcaatgccgggccttgccgccgccgagcaagatgccgtctcgctggtgcgccgcttcgc 254
             |||||||||||||||   ||||||||| || ||  |||||||||||||||||||| || |
Sbjct: 96879 cgcaatgccgggcct---cgccgccgaccaggacaccgtctcgctggtgcgccgcgtctc 96935

                                                                        
Query: 255   tcgggccctcaagcgccggatctcctacctcgttgccctcctcttctgccacaaggtaa 313
              || |||||||| |||||  || || ||||||| | ||||||||||  |||||||||||
Sbjct: 96936 ccgcgccctcaaccgccgcctcaccgacctcgtcggcctcctcttccaccacaaggtaa 96994

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 99/119 (83%), Gaps = 3/119 (2%)
 Strand = Plus / Plus

                                                                            
Query: 195      cgcaatgccgggccttgccgccgccgagcaagatgccgtctcgctggtgcgccgcttcgc 254
                |||||||||||||||   ||||||||| || ||  |||||||||||||||||||| || |
Sbjct: 34372476 cgcaatgccgggcct---cgccgccgaccaggacaccgtctcgctggtgcgccgcgtctc 34372532

                                                                           
Query: 255      tcgggccctcaagcgccggatctcctacctcgttgccctcctcttctgccacaaggtaa 313
                 || |||||||| |||||  || || ||||||| | ||||||||||  |||||||||||
Sbjct: 34372533 ccgcgccctcaaccgccgcctcaccgacctcgtcggcctcctcttccaccacaaggtaa 34372591

---

>ref|NM_001074661.1| Oryza sativa (japonica cultivar-group) Os11g0573000 (Os11g0573000)
            mRNA, partial cds
          Length = 3974

 Score = 71.9 bits (36), Expect = 7e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1166 taccacaaaatatacaagatttttgcacccactgaaaagatagaaaacatcaacgatcag 1225
            |||||||| ||||| ||||||||| ||| |  ||| |||||||| || || || ||||||
Sbjct: 2859 taccacaagatatataagatttttccactccatgagaagatagagaatattaatgatcag 2918

                                    
Query: 1226 tactggacactacgtgcagaggag 1249
            ||||||||||||||||| ||||||
Sbjct: 2919 tactggacactacgtgctgaggag 2942

---

>dbj|AK067123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096M22, full
            insert sequence
          Length = 3975

 Score = 71.9 bits (36), Expect = 7e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1166 taccacaaaatatacaagatttttgcacccactgaaaagatagaaaacatcaacgatcag 1225
            |||||||| ||||| ||||||||| ||| |  ||| |||||||| || || || ||||||
Sbjct: 2860 taccacaagatatataagatttttccactccatgagaagatagagaatattaatgatcag 2919

                                    
Query: 1226 tactggacactacgtgcagaggag 1249
            ||||||||||||||||| ||||||
Sbjct: 2920 tactggacactacgtgctgaggag 2943

---

>dbj|AK059481.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F05, full
            insert sequence
          Length = 1098

 Score = 71.9 bits (36), Expect = 7e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1166 taccacaaaatatacaagatttttgcacccactgaaaagatagaaaacatcaacgatcag 1225
            |||||||| ||||| ||||||||| ||| |  ||| |||||||| || || || ||||||
Sbjct: 23   taccacaagatatataagatttttccactccatgagaagatagagaatattaatgatcag 82

                                    
Query: 1226 tactggacactacgtgcagaggag 1249
            ||||||||||||||||| ||||||
Sbjct: 83   tactggacactacgtgctgaggag 106

---

>gb|BT016292.1| Zea mays clone Contig125 mRNA sequence
          Length = 1106

 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1151 ttgcttgaagtattctaccacaaaatatacaagatttttgcacccactgaaaagatagaa 1210
            |||||||||||||| |||||||| || || ||||| ||| ||||   ||| |||||||| 
Sbjct: 124  ttgcttgaagtattttaccacaagatttataagatctttccacctcatgagaagatagag 183

                                                   
Query: 1211 aacatcaacgatcagtactggacactacgtgcagaggag 1249
            ||||| || ||||||||||||||| |||| || ||||||
Sbjct: 184  aacataaatgatcagtactggacattacgagctgaggag 222

---

>gb|AY104649.1| Zea mays PCO133877 mRNA sequence
          Length = 927

 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1151 ttgcttgaagtattctaccacaaaatatacaagatttttgcacccactgaaaagatagaa 1210
            |||||||||||||| |||||||| || || ||||| ||| ||||   ||| |||||||| 
Sbjct: 638  ttgcttgaagtattttaccacaagatttataagatctttccacctcatgagaagatagag 697

                                                   
Query: 1211 aacatcaacgatcagtactggacactacgtgcagaggag 1249
            ||||| || ||||||||||||||| |||| || ||||||
Sbjct: 698  aacataaatgatcagtactggacattacgagctgaggag 736

---

>emb|CT829411.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA002N03, full
           insert sequence
          Length = 1373

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 95/115 (82%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                       
Query: 195 cgcaatgccgggccttgccgccgccgagcaagatgccgtctcgctggtgcgccgcttcgc 254
           |||||||||||||||   ||||||||| || ||  |||||||||||||||||||| || |
Sbjct: 202 cgcaatgccgggcct---cgccgccgaccaggacaccgtctcgctggtgcgccgcgtctc 258

                                                                  
Query: 255 tcgggccctcaagcgccggatctcctacctcgttgccctcctcttctgccacaag 309
            || |||||||| |||||  || || ||||||| | ||||||||||  |||||||
Sbjct: 259 ccgcgccctcaaccgccgcctcaccgacctcgtcggcctcctcttccaccacaag 313

---

>ref|NM_001060763.1| Oryza sativa (japonica cultivar-group) Os04g0672800 (Os04g0672800)
           mRNA, complete cds
          Length = 1352

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 95/115 (82%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                       
Query: 195 cgcaatgccgggccttgccgccgccgagcaagatgccgtctcgctggtgcgccgcttcgc 254
           |||||||||||||||   ||||||||| || ||  |||||||||||||||||||| || |
Sbjct: 197 cgcaatgccgggcct---cgccgccgaccaggacaccgtctcgctggtgcgccgcgtctc 253

                                                                  
Query: 255 tcgggccctcaagcgccggatctcctacctcgttgccctcctcttctgccacaag 309
            || |||||||| |||||  || || ||||||| | ||||||||||  |||||||
Sbjct: 254 ccgcgccctcaaccgccgcctcaccgacctcgtcggcctcctcttccaccacaag 308

---

>dbj|AK068413.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L20, full
           insert sequence
          Length = 1353

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 95/115 (82%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                       
Query: 195 cgcaatgccgggccttgccgccgccgagcaagatgccgtctcgctggtgcgccgcttcgc 254
           |||||||||||||||   ||||||||| || ||  |||||||||||||||||||| || |
Sbjct: 198 cgcaatgccgggcct---cgccgccgaccaggacaccgtctcgctggtgcgccgcgtctc 254

                                                                  
Query: 255 tcgggccctcaagcgccggatctcctacctcgttgccctcctcttctgccacaag 309
            || |||||||| |||||  || || ||||||| | ||||||||||  |||||||
Sbjct: 255 ccgcgccctcaaccgccgcctcaccgacctcgtcggcctcctcttccaccacaag 309

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1118     gttgacctgtcccatcctgatgctgaacttagattgcttgaagtattctaccacaa 1173
                ||||| |||||| ||||||||||||||||  | ||||||||||||||||| |||||
Sbjct: 18386489 gttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctatcacaa 18386544



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1205     atagaaaacatcaacgatcagtactggacactacgtgcagaggagg 1250
                ||||| ||||| || ||||||||||||||||||||||| |||||||
Sbjct: 18386695 atagagaacataaatgatcagtactggacactacgtgctgaggagg 18386740

---

>emb|CR936945.2| Medicago truncatula chromosome 5 clone mte1-67e6, COMPLETE SEQUENCE
          Length = 127675

 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                
Query: 1132 tcctgatgctgaacttagattgcttgaagtattctaccacaaaatatacaag 1183
            |||||||||||||||||| ||||||||||| || || ||||| |||||||||
Sbjct: 4041 tcctgatgctgaacttaggttgcttgaagtcttttatcacaagatatacaag 4092



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                      
Query: 1193 cccactgaaaagatagaaaacatcaacgatcagtactggacactacgtgcagaggagg 1250
            |||| ||||||||| |||||||| || || || |||||||||||||| || |||||||
Sbjct: 4302 cccaatgaaaagattgaaaacataaatgaccaatactggacactacgagccgaggagg 4359

---

>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138585

 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 1118  gttgacctgtcccatcctgatgctgaacttagattgcttgaagtattctaccacaa 1173
             ||||| |||||| ||||||||||||||||  | ||||||||||||||||| |||||
Sbjct: 38388 gttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctatcacaa 38443



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 1205  atagaaaacatcaacgatcagtactggacactacgtgcagaggagg 1250
             ||||| ||||| || ||||||||||||||||||||||| |||||||
Sbjct: 38594 atagagaacataaatgatcagtactggacactacgtgctgaggagg 38639

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                            
Query: 862      tataatccttcttttattcagttttattgatatactacatgaagctcccctgtatggtca 921
                |||||| ||||||| ||  || ||||||||  | |||||||||||||| || | ||||||
Sbjct: 32965069 tataattcttctttcatgtaggtttattgacttgctacatgaagctcctctctctggtca 32965128

                                                          
Query: 922      ctgagagcccaggagcatagttagtggcaccttgtattgtat 963
                  ||||||| || ||||| ||| ||||||||||||| |||||
Sbjct: 32965129 tcgagagcctagaagcattgttggtggcaccttgtactgtat 32965170

---

>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_A01
          Length = 139121

 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                         
Query: 862   tataatccttcttttattcagttttattgatatactacatgaagctcccctgtatggtca 921
             |||||| ||||||| ||  || ||||||||  | |||||||||||||| || | ||||||
Sbjct: 11009 tataattcttctttcatgtaggtttattgacttgctacatgaagctcctctctctggtca 11068

                                                       
Query: 922   ctgagagcccaggagcatagttagtggcaccttgtattgtat 963
               ||||||| || ||||| ||| ||||||||||||| |||||
Sbjct: 11069 tcgagagcctagaagcattgttggtggcaccttgtactgtat 11110

---

>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1534_E09
          Length = 126209

 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                          
Query: 862    tataatccttcttttattcagttttattgatatactacatgaagctcccctgtatggtca 921
              |||||| ||||||| ||  || ||||||||  | |||||||||||||| || | ||||||
Sbjct: 119810 tataattcttctttcatgtaggtttattgacttgctacatgaagctcctctctctggtca 119869

                                                        
Query: 922    ctgagagcccaggagcatagttagtggcaccttgtattgtat 963
                ||||||| || ||||| ||| ||||||||||||| |||||
Sbjct: 119870 tcgagagcctagaagcattgttggtggcaccttgtactgtat 119911

---

>dbj|AK100242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055F23, full
           insert sequence
          Length = 2349

 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                       
Query: 862 tataatccttcttttattcagttttattgatatactacatgaagctcccctgtatggtca 921
           |||||| ||||||| ||  || ||||||||  | |||||||||||||| || | ||||||
Sbjct: 896 tataattcttctttcatgtaggtttattgacttgctacatgaagctcctctctctggtca 955

                                                     
Query: 922 ctgagagcccaggagcatagttagtggcaccttgtattgtat 963
             ||||||| || ||||| ||| ||||||||||||| |||||
Sbjct: 956 tcgagagcctagaagcattgttggtggcaccttgtactgtat 997

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                 
Query: 1202     aagatagaaaacatcaacgatcagtactggacactacgtgcagaggagg 1250
                |||||||| || || || ||||||||||||||||||||||| |||||||
Sbjct: 20649199 aagatagagaatattaatgatcagtactggacactacgtgctgaggagg 20649151

---

>gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0077M24, complete sequence
          Length = 128920

 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                              
Query: 1202  aagatagaaaacatcaacgatcagtactggacactacgtgcagaggagg 1250
             |||||||| || || || ||||||||||||||||||||||| |||||||
Sbjct: 84207 aagatagagaatattaatgatcagtactggacactacgtgctgaggagg 84159

---

>ref|NM_001054829.1| Oryza sativa (japonica cultivar-group) Os02g0778300 (Os02g0778300)
           mRNA, complete cds
          Length = 1777

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 896 ctacatgaagctcccctgtatggtcactgagagcccaggagcatagttagtggcaccttg 955
           |||||||||||||| || | ||||||  ||||||| || ||||| ||| |||||||||||
Sbjct: 398 ctacatgaagctcctctctctggtcatcgagagcctagaagcattgttggtggcaccttg 457

                   
Query: 956 tattgtat 963
           || |||||
Sbjct: 458 tactgtat 465

---

>dbj|AK058466.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-A12, full
           insert sequence
          Length = 1777

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 896 ctacatgaagctcccctgtatggtcactgagagcccaggagcatagttagtggcaccttg 955
           |||||||||||||| || | ||||||  ||||||| || ||||| ||| |||||||||||
Sbjct: 398 ctacatgaagctcctctctctggtcatcgagagcctagaagcattgttggtggcaccttg 457

                   
Query: 956 tattgtat 963
           || |||||
Sbjct: 458 tactgtat 465

---

>dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02D13, TM0546,
             complete sequence
          Length = 107979

 Score = 52.0 bits (26), Expect = 0.006
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                       
Query: 1193  cccactgaaaagatagaaaacatcaacgatcagtactggacactacgtgcagaggagg 1250
             |||| ||||||||| |||| ||| || ||||| ||||||||| | |||||||||||||
Sbjct: 77882 cccaatgaaaagattgaaaccataaatgatcaatactggacattgcgtgcagaggagg 77825

---

>ref|NM_120743.2| Arabidopsis thaliana UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12);
            cysteine-type endopeptidase/ double-stranded DNA binding
            / ubiquitin thiolesterase/ ubi> (UBP12) mRNA, complete
            cds
          Length = 3898

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1130 catcctgatgctgaacttagattgcttgaagtattctaccacaaaatatacaagatttt 1188
            ||||| ||||| ||||| |||||||| || || || |||||||| || |||||||||||
Sbjct: 2936 catccagatgcagaactgagattgctcgaggtgttttaccacaagatctacaagatttt 2994

---

>ref|NM_180452.1| Arabidopsis thaliana UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12);
            cysteine-type endopeptidase/ double-stranded DNA binding
            / ubiquitin thiolesterase/ ubi> (UBP12) mRNA, complete
            cds
          Length = 3897

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1130 catcctgatgctgaacttagattgcttgaagtattctaccacaaaatatacaagatttt 1188
            ||||| ||||| ||||| |||||||| || || || |||||||| || |||||||||||
Sbjct: 2935 catccagatgcagaactgagattgctcgaggtgttttaccacaagatctacaagatttt 2993

---

>ref|XM_503604.1| Yarrowia lipolytica CLIB122, YALI0E05863g predicted mRNA
          Length = 870

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 181 tccccacaccgcctcgcaatgccgggccttg 211
           |||||||||| ||||||||||| ||||||||
Sbjct: 792 tccccacacctcctcgcaatgctgggccttg 762

---

>gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC F26K24 genomic sequence,
             complete sequence
          Length = 100835

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 1208  gaaaacatcaacgatcagtactggacactacgtgcagaggagg 1250
             ||||||||||| || |||||||||||  |||| ||||||||||
Sbjct: 63483 gaaaacatcaatgaccagtactggactttacgagcagaggagg 63441

---

>gb|AY142616.1| Arabidopsis thaliana putative ubiquitin-specific protease UBP12
            (At5g06600) mRNA, complete cds
          Length = 3379

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1130 catcctgatgctgaacttagattgcttgaagtattctaccacaaaatatacaagatttt 1188
            ||||| ||||| ||||| |||||||| || || || |||||||| || |||||||||||
Sbjct: 2824 catccagatgcagaactgagattgctcgaggtgttttaccacaagatctacaagatttt 2882

---

>gb|AF360198.1| Arabidopsis thaliana putative ubiquitin-specific protease UBP12
            (At5g06600) mRNA, complete cds
          Length = 3890

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1130 catcctgatgctgaacttagattgcttgaagtattctaccacaaaatatacaagatttt 1188
            ||||| ||||| ||||| |||||||| || || || |||||||| || |||||||||||
Sbjct: 2935 catccagatgcagaactgagattgctcgaggtgttttaccacaagatctacaagatttt 2993

---

>gb|AF302663.1|AF302663 Arabidopsis thaliana ubiquitin-specific protease 12 (UBP12) mRNA,
            complete cds
          Length = 3427

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1130 catcctgatgctgaacttagattgcttgaagtattctaccacaaaatatacaagatttt 1188
            ||||| ||||| ||||| |||||||| || || || |||||||| || |||||||||||
Sbjct: 2863 catccagatgcagaactgagattgctcgaggtgttttaccacaagatctacaagatttt 2921

---

>ref|XM_957839.1| Neurospora crassa OR74A hypothetical protein (NCU06216.1) partial
            mRNA
          Length = 3789

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 210  tgccgccgccgagcaagatgccg 232
            |||||||||||||||||||||||
Sbjct: 2889 tgccgccgccgagcaagatgccg 2911

---

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
              lipolytica
          Length = 4224103

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 181    tccccacaccgcctcgcaatgccgggccttg 211
              |||||||||| ||||||||||| ||||||||
Sbjct: 669692 tccccacacctcctcgcaatgctgggccttg 669722

---

>emb|BX936352.19| Zebrafish DNA sequence from clone DKEY-37I13 in linkage group 6,
            complete sequence
          Length = 161193

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1337 tatgtgtgattgtgtacttgtt 1358
            ||||||||||||||||||||||
Sbjct: 5753 tatgtgtgattgtgtacttgtt 5732

---

>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence
          Length = 24543557

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1318     aactttctctatctctctttat 1339
                ||||||||||||||||||||||
Sbjct: 21913384 aactttctctatctctctttat 21913405

---

>ref|NM_112024.3| Arabidopsis thaliana cysteine-type endopeptidase/ double-stranded DNA
            binding / ubiquitin thiolesterase/ ubiquitin-specific
            protease (AT3G11910) mRNA, complete cds
          Length = 3813

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 1208 gaaaacatcaacgatcagtactggacactacgtgcagaggag 1249
            ||||||||||| || |||||||||||  |||| |||||||||
Sbjct: 2997 gaaaacatcaatgaccagtactggactttacgagcagaggag 3038

---

>gb|AC122252.4| Mus musculus BAC clone RP23-170E7 from chromosome 17, complete sequence
          Length = 219695

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1193   cccactgaaaagatagaaaaca 1214
              ||||||||||||||||||||||
Sbjct: 100183 cccactgaaaagatagaaaaca 100162

---

>gb|AC123675.7| Mus musculus chromosome 15, clone RP23-271I6, complete sequence
          Length = 233422

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 979    aaagctttgtagtatattgagt 1000
              ||||||||||||||||||||||
Sbjct: 143883 aaagctttgtagtatattgagt 143904

---

>gb|AC069564.34| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435n13, complete
             sequence
          Length = 185784

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1193  cccactgaaaagatagaaaaca 1214
             ||||||||||||||||||||||
Sbjct: 19686 cccactgaaaagatagaaaaca 19707

---

>gb|AY064010.1| Arabidopsis thaliana At3g11910 mRNA sequence
          Length = 4231

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 1208 gaaaacatcaacgatcagtactggacactacgtgcagaggag 1249
            ||||||||||| || |||||||||||  |||| |||||||||
Sbjct: 3489 gaaaacatcaatgaccagtactggactttacgagcagaggag 3530

---

>gb|AC010068.8| Drosophila melanogaster 3L BAC RP98-15K24 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 178607

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1318   aactttctctatctctctttat 1339
              ||||||||||||||||||||||
Sbjct: 134533 aactttctctatctctctttat 134554

---

>emb|AL583783.6| Human DNA sequence from clone RP11-75N6 on chromosome 13 Contains a
             novel gene and a pseudogene similar to part of heat shock
             70kDa protein 8 (HSPA8), complete sequence
          Length = 85606

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 870   ttcttttattcagttttattga 891
             ||||||||||||||||||||||
Sbjct: 76816 ttcttttattcagttttattga 76795

---

>gb|AC002470.17| Homo sapiens Chromosome 22q11.2 BAC Clone b135h6 In BCRL2-GGT Region,
              complete sequence
          Length = 235395

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1277   acagtggaagaggatgagaaga 1298
              ||||||||||||||||||||||
Sbjct: 161371 acagtggaagaggatgagaaga 161392

---

>gb|BT002760.1| Arabidopsis thaliana clone C105177 putative ubiquitin
            carboxyl-terminal hydrolase (At3g11910) mRNA, complete
            cds
          Length = 3379

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 1208 gaaaacatcaacgatcagtactggacactacgtgcagaggag 1249
            ||||||||||| || |||||||||||  |||| |||||||||
Sbjct: 2902 gaaaacatcaatgaccagtactggactttacgagcagaggag 2943

---

>dbj|AP000848.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-775D16, complete
              sequence
          Length = 186965

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 38     gatcccctcgcccctcgactgctgca 63
              ||||||||| ||||||||||||||||
Sbjct: 138994 gatcccctctcccctcgactgctgca 138969

---

>gb|AY111375.1| Zea mays CL38709_1 mRNA sequence
          Length = 1037

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 1221 atcagtactggacactacgtgcagaggagg 1250
            |||||||||||||||| ||||| |||||||
Sbjct: 1037 atcagtactggacactgcgtgcggaggagg 1008

---

>gb|AC188772.2| Gallus gallus BAC clone CH261-135E23 from chromosome z, complete
             sequence
          Length = 181297

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1501  actgaaatgaaatatacagtt 1521
             |||||||||||||||||||||
Sbjct: 75765 actgaaatgaaatatacagtt 75785

---

>gb|AC187515.2| Gallus gallus BAC clone CH261-9P15 from chromosome z, complete sequence
          Length = 212440

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1501  actgaaatgaaatatacagtt 1521
             |||||||||||||||||||||
Sbjct: 22213 actgaaatgaaatatacagtt 22193

---

>gb|CP000383.1| Cytophaga hutchinsonii ATCC 33406, complete genome
          Length = 4433218

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 843     atgatgtttcctaagtattta 863
               |||||||||||||||||||||
Sbjct: 2386741 atgatgtttcctaagtattta 2386761

---

>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome
          Length = 1111496

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 706    aattgttatctgaattttgta 726
              |||||||||||||||||||||
Sbjct: 905624 aattgttatctgaattttgta 905604

---

>gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosome 1, complete sequence
          Length = 221754

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 880   cagttttattgatatactaca 900
             |||||||||||||||||||||
Sbjct: 24020 cagttttattgatatactaca 24000

---

>gb|AC125403.4| Mus musculus BAC clone RP23-4E15 from 1, complete sequence
          Length = 126790

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 880    cagttttattgatatactaca 900
              |||||||||||||||||||||
Sbjct: 116814 cagttttattgatatactaca 116794

---

>gb|AC138664.17| Mus musculus chromosome 3, clone RP24-289J19, complete sequence
          Length = 151691

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 812   atagtccttatctattatgtt 832
             |||||||||||||||||||||
Sbjct: 77259 atagtccttatctattatgtt 77279

---

>gb|AC009773.27| Homo sapiens 12 BAC RP11-82C23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 130027

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 577    gagatgggaagggatgagcaa 597
              |||||||||||||||||||||
Sbjct: 122917 gagatgggaagggatgagcaa 122897

---

>emb|CT025158.5| Mouse DNA sequence from clone RP23-178N11 on chromosome 16, complete
              sequence
          Length = 194555

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1416   ttattttgatgtgcacttgtt 1436
              |||||||||||||||||||||
Sbjct: 188675 ttattttgatgtgcacttgtt 188655

---

>gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, complete sequence
          Length = 195108

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1155   ttgaagtattctaccacaaaatata 1179
              |||||||||| ||||||||||||||
Sbjct: 155251 ttgaagtattttaccacaaaatata 155275

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 134      cacccacctgatcatcctgcg 154
                |||||||||||||||||||||
Sbjct: 21445771 cacccacctgatcatcctgcg 21445791

---

>gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, complete sequence
          Length = 195609

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1402  gtgcacttgtaaaattatttt 1422
             |||||||||||||||||||||
Sbjct: 82410 gtgcacttgtaaaattatttt 82390

---

>emb|AL365254.14| Human DNA sequence from clone RP11-420H21 on chromosome 1, complete
             sequence
          Length = 157721

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1405  cacttgtaaaattattttgat 1425
             |||||||||||||||||||||
Sbjct: 46145 cacttgtaaaattattttgat 46125

---

>emb|AL022400.8|HS809F4 Human DNA sequence from clone RP4-809F4 on chromosome 1q23.1-24.3
             Contains part of the gene for expressed in hematopoietic
             cells (heart, liver) (HLL), a novel pseudogene and a CpG
             island, complete sequence
          Length = 148335

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 824   tattatgtttatggcaatcat 844
             |||||||||||||||||||||
Sbjct: 86281 tattatgtttatggcaatcat 86261

---

>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1198   tgaaaagatagaaaacatcaa 1218
              |||||||||||||||||||||
Sbjct: 542597 tgaaaagatagaaaacatcaa 542577



 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1198    tgaaaagatagaaaacatcaa 1218
               |||||||||||||||||||||
Sbjct: 1508860 tgaaaagatagaaaacatcaa 1508840



 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1198    tgaaaagatagaaaacatcaa 1218
               |||||||||||||||||||||
Sbjct: 1696014 tgaaaagatagaaaacatcaa 1696034



 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1198    tgaaaagatagaaaacatcaa 1218
               |||||||||||||||||||||
Sbjct: 1740602 tgaaaagatagaaaacatcaa 1740582



 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1198    tgaaaagatagaaaacatcaa 1218
               |||||||||||||||||||||
Sbjct: 2024351 tgaaaagatagaaaacatcaa 2024331

---

>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 228  tgccgtctcgctggtgcgccgcttc 252
            ||||| |||||||||||||||||||
Sbjct: 2633 tgccgcctcgctggtgcgccgcttc 2609

---

>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 228    tgccgtctcgctggtgcgccgcttc 252
              ||||| |||||||||||||||||||
Sbjct: 259426 tgccgcctcgctggtgcgccgcttc 259402

---

>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 228    tgccgtctcgctggtgcgccgcttc 252
              ||||| |||||||||||||||||||
Sbjct: 126702 tgccgcctcgctggtgcgccgcttc 126678

---

>emb|BX571864.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              6/17
          Length = 349071

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 140    cctgatcatcctgcgcaccgcgcagtccg 168
              ||||||| ||||||| |||||||||||||
Sbjct: 295191 cctgatcttcctgcgtaccgcgcagtccg 295219

---

>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0489D11
          Length = 150757

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 134  cacccacctgatcatcctgcg 154
            |||||||||||||||||||||
Sbjct: 7381 cacccacctgatcatcctgcg 7401

---

>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1210_A07
          Length = 131394

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   cacccacctgatcatcctgcg 154
             |||||||||||||||||||||
Sbjct: 62876 cacccacctgatcatcctgcg 62896

---

>gb|AC016412.12| Homo sapiens chromosome 8, clone RP11-9B18, complete sequence
          Length = 131000

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 20    tcccctcacccctcaccagatcccc 44
             ||||||||||||||||||| |||||
Sbjct: 12734 tcccctcacccctcaccagttcccc 12758

---

>dbj|BS000189.1| Pan troglodytes chromosome 22 clone:PTB-016G16, map 22, partial
             sequences, complete sequence
          Length = 57494

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 915   atggtcactgagagcccagga 935
             |||||||||||||||||||||
Sbjct: 16845 atggtcactgagagcccagga 16825

---

>gb|AY190962.1| Drosophila willistoni clone DWIF01_6_P12 (D1474) genomic sequence
          Length = 41651

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1320  ctttctctatctctctttatgtgtg 1344
             |||||||| ||||||||||||||||
Sbjct: 20710 ctttctctctctctctttatgtgtg 20686

---

>emb|AL929208.9| Zebrafish DNA sequence from clone DKEY-56P7 in linkage group 7, complete
              sequence
          Length = 189608

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 861    ttataatccttcttttattca 881
              |||||||||||||||||||||
Sbjct: 137095 ttataatccttcttttattca 137075

---

>gb|AC102548.11| Mus musculus chromosome 19, clone RP23-135H14, complete sequence
          Length = 227173

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 288   tgccctcctcttctgccacaa 308
             |||||||||||||||||||||
Sbjct: 34617 tgccctcctcttctgccacaa 34597

---

>emb|AL844548.7| Mouse DNA sequence from clone RP23-263D22 on chromosome 2, complete
              sequence
          Length = 198946

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 608    ctcgatgacctgaatccaatc 628
              |||||||||||||||||||||
Sbjct: 105817 ctcgatgacctgaatccaatc 105797

---

>gb|AC133166.2| Mus musculus BAC clone RP24-186D13 from 1, complete sequence
          Length = 158206

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 880   cagttttattgatatactaca 900
             |||||||||||||||||||||
Sbjct: 99740 cagttttattgatatactaca 99720

---

>ref|XM_763960.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_438_21385_26946) partial mRNA
          Length = 5562

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 179 cctccccacaccgcctcgcaatgcc 203
           ||||| |||||||||||||||||||
Sbjct: 840 cctcctcacaccgcctcgcaatgcc 816

---

>emb|AL807399.5| Mouse DNA sequence from clone RP23-382O11 on chromosome 4, complete
             sequence
          Length = 181004

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1303  tgtgcttctcattcaaactttctct 1327
             |||| ||||||||||||||||||||
Sbjct: 92020 tgtggttctcattcaaactttctct 92044


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 275,786,676
Number of extensions: 15337434
Number of successful extensions: 321941
Number of sequences better than 10.0: 80
Number of HSP's gapped: 321934
Number of HSP's successfully gapped: 89
Length of query: 1547
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1524
Effective length of database: 18,503,978,556
Effective search space: 28200063319344
Effective search space used: 28200063319344
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)

---