ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf44o17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK120465:Os01g0174100 140 1e-33
2AK061378:Os06g0601100 99 3e-21
3AK059761:Os06g0601100 99 3e-21
4AK107965:Os05g0542700 47 1e-05
5AF372832:Os07g0197100 32 0.29
6AK110026: 32 0.50
7AK109126:Os01g0584100 31 0.65
8AK063038:Os08g0449300 30 1.9
9AK106254:Os06g0573700 29 3.2
10AK105733:Os05g0475700 29 3.2
11Os07g0543300:Os07g0543300 28 5.4
12AK106071:Os06g0163300 28 5.4
13AK073824:Os06g0163300 28 5.4
14AK060328:Os06g0163300 28 5.4
15AK058295:Os06g0163300 28 5.4
16Os08g0518400:Os08g0518400 28 5.5
17Os05g0595800:Os05g0595800 28 5.5
18AK101109:Os03g0625900 28 5.5
19Os02g0555900:Os02g0555900 28 7.2
20AK111797:Os11g0208900 28 7.2
21AK106467:Os10g0141900 28 7.2
22AK100040:Os11g0208900 28 7.2
23Os01g0221600:Os01g0221600 27 9.3
24AK121903: 27 9.4
25AK102152:Os09g0454900 27 9.4
26AK062636:Os07g0686300 27 9.4 
>AK120465:Os01g0174100 |
          Length = 111
 Score =  140 bits (352), Expect = 1e-33
 Identities = 75/112 (66%), Positives = 80/112 (71%), Gaps = 4/112 (3%)
 Frame = +1

Query: 19  MAGLQRSSLTFRRSGSSGMVWGERLMSDEHSQWTSGEPEFRELRHSRSVGSVGAQRRRND 198
           MA LQRSS TFRRSGSSG+VW ERLM D HS+    E    ELRHSRSVG +G QRR  D
Sbjct: 1   MAALQRSSQTFRRSGSSGLVWDERLMLDGHSE-RDQEDGALELRHSRSVGLIGLQRRHGD 59

Query: 199 GTEH----GGQAFRTRRVAPAIDPPSPKVPGCIFCGIFRKAGPSQPSKARRY 342
           G  H      QAF TRRV PA DPPSPKVPGCIFCGIFRK   S+PSK RR+
Sbjct: 60  GAGHTRCNNSQAFHTRRVPPAQDPPSPKVPGCIFCGIFRKPVLSEPSKPRRF 111
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>AK061378:Os06g0601100 |
          Length = 149

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 36/143 (25%)
 Frame = +1

Query: 19  MAGLQRSSLTFRRSGSSGMVWGERLMSDEHSQWTSG---------EPEFRELRHSRSVGS 171
           MAGLQRS+ TFRRSGSSG+VW ER ++++     +G         EP+  ELRHS+SVGS
Sbjct: 2   MAGLQRSATTFRRSGSSGLVWDERFLTEDAEAAKAGDGDGGGGTEEPQ-PELRHSKSVGS 60

Query: 172 VGAQRR-----------------------RNDGTEHGG----QAFRTRRVAPAIDPPSPK 270
           +G  RR                       + DG +       Q FRT+ +AP +DPPSP+
Sbjct: 61  IGMMRRVAADDGDDSEKTTKQQRKKKKKKKKDGQKEDDNRSQQVFRTKDIAPDVDPPSPR 120

Query: 271 VPGCIFCGIFRKAGPSQPSKARR 339
           V GCI C IF  +G S  + +RR
Sbjct: 121 VSGCILCSIFSGSGSSSSATSRR 143
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>AK059761:Os06g0601100 |
          Length = 149

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 36/143 (25%)
 Frame = +1

Query: 19  MAGLQRSSLTFRRSGSSGMVWGERLMSDEHSQWTSG---------EPEFRELRHSRSVGS 171
           MAGLQRS+ TFRRSGSSG+VW ER ++++     +G         EP+  ELRHS+SVGS
Sbjct: 2   MAGLQRSATTFRRSGSSGLVWDERFLTEDAEAAKAGDGDGGGGTEEPQ-PELRHSKSVGS 60

Query: 172 VGAQRR-----------------------RNDGTEHGG----QAFRTRRVAPAIDPPSPK 270
           +G  RR                       + DG +       Q FRT+ +AP +DPPSP+
Sbjct: 61  IGMMRRVAADDGDDSEKTTKQQRKKKKKKKKDGQKEDDNRSQQVFRTKDIAPDVDPPSPR 120

Query: 271 VPGCIFCGIFRKAGPSQPSKARR 339
           V GCI C IF  +G S  + +RR
Sbjct: 121 VSGCILCSIFSGSGSSSSATSRR 143
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>AK107965:Os05g0542700 |
          Length = 68

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = +1

Query: 19  MAGLQRSSLTFRRSGSSGMVWGERLMSDE 105
           MAGLQRSS TFRRSGSSG+VW +R +S E
Sbjct: 1   MAGLQRSSETFRRSGSSGLVWDDRHLSGE 29
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>AF372832:Os07g0197100 |
          Length = 509

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = -3

Query: 311 PAFLKIPQKMQPGTLGDGGSMAGATRRVRNAWPPCSVP---SLRLRCAPTDPTLRECRSS 141
           PA + + Q+ + G    GGS A A R    A      P    LRLRCA   P LR    +
Sbjct: 12  PAAIAVVQQQRRGRSRGGGSGAAAVRCSAVAPTSAIAPILADLRLRCAAPLPVLRRVADA 71

Query: 140 LNSG 129
           + SG
Sbjct: 72  MASG 75
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>AK110026: |
          Length = 1006

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -2

Query: 411 LHKLKTLITLSHIWLMNTQ-ITLVVPSGLRWLRRSCLPENPTEDAARNLGR 262
           LH +K    L  IW+M ++ +  ++   L W   SC  E   ED A+N  R
Sbjct: 754 LHFIKKEAKLKPIWMMVSEDVEEILGGRLNWCTLSCAAEERVEDPAKNPAR 804
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>AK109126:Os01g0584100 |
          Length = 263

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = +1

Query: 193 NDGTEHGGQAFRTRRVAPAID----PPSPKVPGCIFCGIFRKAGPSQPSKARRYH 345
           +D +       RT   APA      PP P  P  IF  +F+K G    SK+RR H
Sbjct: 35  SDASASPDSTVRTTNPAPAPPRRPPPPPPPPPSSIFYNLFKKGG----SKSRRIH 85
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>AK063038:Os08g0449300 |
          Length = 95

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -2

Query: 318 RRSCLPENPTEDAARNLGRWWIYGRGYPPCPECLAAMLGAVVAPALRTDG 169
           ++SC   N T    R    +W++ R +P C      +L  VV  AL  DG
Sbjct: 28  KKSCTARNVTSPILR---AFWLHCRPWPLCSSFSELLLAEVVEEALEEDG 74
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>AK106254:Os06g0573700 |
          Length = 249

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = +1

Query: 25  GLQRSSLTFRRSGSSGMVWGERLMSDEHSQWTSGEPEFRELRHSRSVGSVGA-QRRRNDG 201
           G +R+ +   R+ +      E    +    W SG   ++ +      GSVGA +RRR   
Sbjct: 155 GSERTRVASERTSAGSRRPAEEARKESACDWASGGRVWKRMAGGSEAGSVGAGERRRQRR 214

Query: 202 TEHGGQA 222
              GG A
Sbjct: 215 AAAGGGA 221
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>AK105733:Os05g0475700 |
          Length = 432

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +1

Query: 103 EHSQWTSGEP----EFRELRHSRSV-GSVGAQRRRNDGTEHGGQAFRTRRVAP 246
           EH Q T GE       R  RH R+  G VGA+  R  G + GG+  R R   P
Sbjct: 268 EHGQATGGEAGEQSARRRRRHRRAGDGRVGARGGRGGGEQGGGRRRRRRERRP 320
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>Os07g0543300:Os07g0543300 |
          Length = 1020

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 278 PGTLGDGGSMAGATRRVRNAWPPCSVPSLRLRCAPTD 168
           PG+ G+GG++  A +R+R     C   + RL C  TD
Sbjct: 170 PGSEGEGGTLRNALQRLRQR---CRKLAARLGCRSTD 203
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>AK106071:Os06g0163300 |
          Length = 363

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = -3

Query: 275 GTLGDGGSMAGATRRVRN--AWPPCSV 201
           GTL DG   AG  R+  N   WP C+V
Sbjct: 127 GTLRDGSRKAGGERKALNDKGWPECNV 153
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>AK073824:Os06g0163300 |
          Length = 362

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = -3

Query: 275 GTLGDGGSMAGATRRVRN--AWPPCSV 201
           GTL DG   AG  R+  N   WP C+V
Sbjct: 126 GTLRDGSRKAGGERKALNDKGWPECNV 152
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>AK060328:Os06g0163300 |
          Length = 363

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = -3

Query: 275 GTLGDGGSMAGATRRVRN--AWPPCSV 201
           GTL DG   AG  R+  N   WP C+V
Sbjct: 127 GTLRDGSRKAGGERKALNDKGWPECNV 153
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>AK058295:Os06g0163300 |
          Length = 359

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = -3

Query: 275 GTLGDGGSMAGATRRVRN--AWPPCSV 201
           GTL DG   AG  R+  N   WP C+V
Sbjct: 123 GTLRDGSRKAGGERKALNDKGWPECNV 149
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>Os08g0518400:Os08g0518400 |
          Length = 810

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 8/69 (11%)
 Frame = -2

Query: 483 HLNSMQLYKHIIDYYHLHI----LDG----PELHKLKTLITLSHIWLMNTQITLVVPSGL 328
           H N + L  +  D  HL +    +DG      L   + L T    WL    I L   +GL
Sbjct: 690 HRNLVSLIGYCNDKKHLALVYEYMDGGSLADHLRGQEDLHTEPLTWLQRLNIALDSANGL 749

Query: 327 RWLRRSCLP 301
            +L RSC P
Sbjct: 750 EYLHRSCSP 758
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>Os05g0595800:Os05g0595800 |
          Length = 1345

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 29   CRGPH*HSGGQDHQAWSGARGSCRMNIASGPQGSQNSG--SYGTPAA*GPSVRSA 187
            C G   HS G   Q  + A GS       G  G QN+G  S+GT     P+ R A
Sbjct: 1263 CTGGTCHSSGSGGQQQNRAGGSKNKGKNGGRPGGQNNGSNSFGTSTFSIPAPRQA 1317
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>AK101109:Os03g0625900 |
          Length = 511

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +1

Query: 82  GERLMSDEHSQWTSGEPEFRELRH-SRSVGSVGAQRRRNDGTEHGGQAFRTRRVA 243
           GE    +E  Q T+GE + R  +   + V     +RR +D  E  G+    RRVA
Sbjct: 68  GEEEEEEEEEQETAGEKKMRIAKELLKKVTDAARRRREDDEDEDEGEEAGRRRVA 122
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>Os02g0555900:Os02g0555900 |
          Length = 705

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
 Frame = +1

Query: 241 APAIDPPSPKVPGCIFCGIFRKAGPSQPSKA--RRYH*SDLCVH 366
           +PA  PPSP  P C         G S   +A  R Y  +D  VH
Sbjct: 97  SPAAAPPSPSPPACASAAESVSGGSSSDDEADHRNYRYTDPVVH 140
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>AK111797:Os11g0208900 |
          Length = 1074

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -2

Query: 426 LDGPELHKLKTLITLSHIWLMNTQITLVVPSG---LRWLRRSCLPEN 295
           L GP    L  L  LS + L +T +T  +P+    LR LR  CL EN
Sbjct: 95  LHGPITPLLGNLSFLSFLRLTDTNLTASIPADLGKLRRLRHLCLGEN 141
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>AK106467:Os10g0141900 |
          Length = 396

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -2

Query: 321 LRRSCLPENPTEDAARNLGRWWIYGRGYPPCPECLAAMLGAVV 193
           LR+ C     TE + RN+  +WI G G+   PE   ++L A V
Sbjct: 196 LRKLCA----TEVSKRNVSGFWIGGLGFGDSPEERCSILDAAV 234
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>AK100040:Os11g0208900 |
          Length = 1074

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -2

Query: 426 LDGPELHKLKTLITLSHIWLMNTQITLVVPSG---LRWLRRSCLPEN 295
           L GP    L  L  LS + L +T +T  +P+    LR LR  CL EN
Sbjct: 95  LHGPITPLLGNLSFLSFLRLTDTNLTASIPADLGKLRRLRHLCLGEN 141
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>Os01g0221600:Os01g0221600 |
          Length = 524

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 222 IPDTAGSPCHRSTIAQGSWLHLLWDF 299
           +P+ A  P     ++   WLH +WDF
Sbjct: 20  VPEDAKKPISEEGLSPRKWLHDVWDF 45
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>AK121903: |
          Length = 144

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +2

Query: 53  GGQDHQAWSGARGSCRMNIASGPQGSQNSGSYGTPAA*G-PSVRSAGATTAPS 208
           GG     W+GA GS     AS P+     G   +P A G  +  +AG    PS
Sbjct: 50  GGSCATWWAGAAGSAPAAAASLPRPPMRGGGIPSPTAAGTATTTAAGGGLRPS 102
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>AK102152:Os09g0454900 |
          Length = 898

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -2

Query: 294 PTEDAARNLGRWWIYGRGYP-PCPECLAAMLG 202
           P E     LG   +YGR YP P P  L AM G
Sbjct: 851 PPEPRVEALGFLRLYGRSYPLPVPGSLTAMAG 882
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>AK062636:Os07g0686300 |
          Length = 181

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 270 LGRWWIYGRGYPPCPECLAAMLGAVVAPALRTDG 169
           L RWW+  R    CP C   +L +  A A   DG
Sbjct: 124 LDRWWLSARPPATCPLCRCRLLQSPSAAADDGDG 157


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 22,021,610
Number of extensions: 574383
Number of successful extensions: 1808
Number of sequences better than 10.0: 26
Number of HSP's gapped: 1801
Number of HSP's successfully gapped: 26
Length of query: 221
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 124
Effective length of database: 11,515,878
Effective search space: 1427968872
Effective search space used: 1427968872
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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