ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf44o17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001048696.1| Oryza sativa (japonica cultivar-group) Os01g... 52 0.003
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
3dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
4dbj|AK120465.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.003
5ref|XM_394526.2| PREDICTED: Apis mellifera similar to CG32702-PA... 44 0.63
6emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 2.5
7gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome 42 2.5
8gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome 42 2.5
9gb|AC128687.10| Homo sapiens 3 BAC RP11-255E6 (Roswell Park Canc... 42 2.5
10gb|AE010095.1| Streptococcus pyogenes strain MGAS8232, section 1... 42 2.5
11gb|CP000479.1| Mycobacterium avium 104, complete genome 40 9.8
12gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome 40 9.8
13gb|AC189527.1| Brassica rapa subsp. pekinensis clone KBrB092L06,... 40 9.8
14gb|AC183805.2| Pan troglodytes BAC clone CH251-9E14 from chromos... 40 9.8
15gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome 40 9.8
16gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome 40 9.8
17gb|AC183592.2| Pan troglodytes BAC clone CH251-733I16 from chrom... 40 9.8
18gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 9.8
19gb|AC139574.4| Mus musculus BAC clone RP23-477I8 from chromosome... 40 9.8
20gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome 40 9.8
21gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome 40 9.8
22gb|AE006609.1| Streptococcus pyogenes M1 GAS, section 138 of 167... 40 9.8
23gb|AC140187.3| Mus musculus BAC clone RP24-364N20 from chromosom... 40 9.8
24gb|AC142267.3| Mus musculus BAC clone RP24-131K10 from chromosom... 40 9.8
25gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome 40 9.8
26gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 9.8
27gb|AC151827.5| Mus musculus BAC clone RP24-453P17 from chromosom... 40 9.8
28dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
29emb|AL954360.3| Human DNA sequence from clone RP11-98I6 on chrom... 40 9.8
30emb|AL589794.7| Human DNA sequence from clone RP11-564C4 on chro... 40 9.8
31emb|AL512366.12| Human DNA sequence from clone RP11-449O16 on ch... 40 9.8
32emb|AL450382.7| Human DNA sequence from clone RP11-56A21 on chro... 40 9.8
33emb|AL356364.18| Human DNA sequence from clone RP11-328I22 on ch... 40 9.8
34emb|AL031943.11|HS223B1 Human DNA sequence from clone RP1-223B1 ... 40 9.8
35gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 9.8
36gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome 40 9.8
37dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome 40 9.8
38gb|AC069018.17|AC069018 Mus musculus BAC MGS3-563C15 (Genome Sy... 40 9.8
39dbj|AB164396.1| Hordeum vulgare HvMS mRNA for methionine synthas... 40 9.8
40dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
41gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J... 40 9.8
42gb|AC027134.4|AC027134 Arabidopsis thaliana chromosome I BAC F13... 40 9.8
43ref|XM_953459.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.8
44emb|AL929407.16| Mouse DNA sequence from clone RP23-99C16 on chr... 40 9.8
45dbj|AP001815.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.8
46ref|NG_001480.1| Mus musculus ubiquitin-activating enzyme E1, Ch... 40 9.8
47gb|AC155902.1| Loxodonta africana, clone Loxodonta africana-6767... 40 9.8
48gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 9.8

>ref|NM_001048696.1| Oryza sativa (japonica cultivar-group) Os01g0174100 (Os01g0174100)
           mRNA, complete cds
          Length = 704
 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 265 cccaaggttcctggctgcatcttctgtgggattttcaggaag 306
           ||||||||||| || |||||||||||||| ||||| ||||||
Sbjct: 305 cccaaggttcccggatgcatcttctgtggaatttttaggaag 346



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                         
Query: 265     cccaaggttcctggctgcatcttctgtgggattttcaggaag 306
               ||||||||||| || |||||||||||||| ||||| ||||||
Sbjct: 3817449 cccaaggttcccggatgcatcttctgtggaatttttaggaag 3817408



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>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0089K24
          Length = 154137

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 265   cccaaggttcctggctgcatcttctgtgggattttcaggaag 306
             ||||||||||| || |||||||||||||| ||||| ||||||
Sbjct: 90991 cccaaggttcccggatgcatcttctgtggaatttttaggaag 90950



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>dbj|AK120465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108I08, full
           insert sequence
          Length = 710

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 265 cccaaggttcctggctgcatcttctgtgggattttcaggaag 306
           ||||||||||| || |||||||||||||| ||||| ||||||
Sbjct: 311 cccaaggttcccggatgcatcttctgtggaatttttaggaag 352



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>ref|XM_394526.2| PREDICTED: Apis mellifera similar to CG32702-PA (LOC411053), mRNA
          Length = 11304

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 492  atttatctttttctcgatcttt 513
            ||||||||||||||||||||||
Sbjct: 4524 atttatctttttctcgatcttt 4503



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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 200     gcaccgagcatggcggccagg 220
               |||||||||||||||||||||
Sbjct: 2801734 gcaccgagcatggcggccagg 2801714



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>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 377     tgtgacagggttatcagggtc 397
               |||||||||||||||||||||
Sbjct: 1548584 tgtgacagggttatcagggtc 1548564



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>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
          Length = 1928252

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 377     tgtgacagggttatcagggtc 397
               |||||||||||||||||||||
Sbjct: 1565127 tgtgacagggttatcagggtc 1565107



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>gb|AC128687.10| Homo sapiens 3 BAC RP11-255E6 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 92345

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 50   tcaggaggtcaggatcatcag 70
            |||||||||||||||||||||
Sbjct: 8068 tcaggaggtcaggatcatcag 8088



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>gb|AE010095.1| Streptococcus pyogenes strain MGAS8232, section 143 of 173 of the
            complete genome
          Length = 10029

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 377  tgtgacagggttatcagggtc 397
            |||||||||||||||||||||
Sbjct: 6061 tgtgacagggttatcagggtc 6041



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>gb|CP000479.1| Mycobacterium avium 104, complete genome
          Length = 5475491

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 215     gccaggcattccggacacgg 234
               ||||||||||||||||||||
Sbjct: 3924754 gccaggcattccggacacgg 3924735



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>gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome
          Length = 3705021

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 493    tttatctttttctcgatctt 512
              ||||||||||||||||||||
Sbjct: 306643 tttatctttttctcgatctt 306624



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>gb|AC189527.1| Brassica rapa subsp. pekinensis clone KBrB092L06, complete sequence
          Length = 126922

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   ctatgcatatttatcttttt 503
             ||||||||||||||||||||
Sbjct: 29773 ctatgcatatttatcttttt 29754



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>gb|AC183805.2| Pan troglodytes BAC clone CH251-9E14 from chromosome 10, complete
             sequence
          Length = 138735

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 279   ctgcatcttctgtgggattttcag 302
             ||||||||||| ||||||||||||
Sbjct: 18254 ctgcatcttctctgggattttcag 18277



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>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
          Length = 1860355

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     gtgacagggttatcagggtc 397
               ||||||||||||||||||||
Sbjct: 1530671 gtgacagggttatcagggtc 1530652



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>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
          Length = 1836467

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     gtgacagggttatcagggtc 397
               ||||||||||||||||||||
Sbjct: 1506783 gtgacagggttatcagggtc 1506764



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>gb|AC183592.2| Pan troglodytes BAC clone CH251-733I16 from chromosome 10, complete
             sequence
          Length = 167069

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 279   ctgcatcttctgtgggattttcag 302
             ||||||||||| ||||||||||||
Sbjct: 87633 ctgcatcttctctgggattttcag 87610



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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 486     atgcatatttatctttttct 505
               ||||||||||||||||||||
Sbjct: 2098933 atgcatatttatctttttct 2098914



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>gb|AC139574.4| Mus musculus BAC clone RP23-477I8 from chromosome 15, complete sequence
          Length = 190948

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     aagggcagggaagttccatg 21
             ||||||||||||||||||||
Sbjct: 94343 aagggcagggaagttccatg 94324



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>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     gtgacagggttatcagggtc 397
               ||||||||||||||||||||
Sbjct: 1512311 gtgacagggttatcagggtc 1512292



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>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
          Length = 1899877

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     gtgacagggttatcagggtc 397
               ||||||||||||||||||||
Sbjct: 1543418 gtgacagggttatcagggtc 1543399



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>gb|AE006609.1| Streptococcus pyogenes M1 GAS, section 138 of 167 of the complete
            genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 378  gtgacagggttatcagggtc 397
            ||||||||||||||||||||
Sbjct: 6059 gtgacagggttatcagggtc 6040



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>gb|AC140187.3| Mus musculus BAC clone RP24-364N20 from chromosome Y, complete sequence
          Length = 151358

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   tagagtgatctgtgtgttca 365
             ||||||||||||||||||||
Sbjct: 35836 tagagtgatctgtgtgttca 35817



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>gb|AC142267.3| Mus musculus BAC clone RP24-131K10 from chromosome Y, complete sequence
          Length = 151710

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   tagagtgatctgtgtgttca 365
             ||||||||||||||||||||
Sbjct: 97625 tagagtgatctgtgtgttca 97606



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>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
          Length = 1897573

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     gtgacagggttatcagggtc 397
               ||||||||||||||||||||
Sbjct: 1539822 gtgacagggttatcagggtc 1539803



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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 201     caccgagcatggcggccagg 220
               ||||||||||||||||||||
Sbjct: 3058095 caccgagcatggcggccagg 3058114



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>gb|AC151827.5| Mus musculus BAC clone RP24-453P17 from chromosome y, complete sequence
          Length = 166980

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    tagagtgatctgtgtgttca 365
              ||||||||||||||||||||
Sbjct: 124180 tagagtgatctgtgtgttca 124199



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 356     tgtgtgttcatcaaccatat 375
               ||||||||||||||||||||
Sbjct: 4017027 tgtgtgttcatcaaccatat 4017046



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>emb|AL954360.3| Human DNA sequence from clone RP11-98I6 on chromosome 10 Contains a
             novel protein similar to KIAA0592, solute carrier family 9
             member 3 (SLC9A3) pseudogene and novel protein similar to
             N-acylsphingosine amidohydrolase (non-lysosomal
             ceramidase) 2 (ASAH2), complete sequence
          Length = 163231

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 279   ctgcatcttctgtgggattttcag 302
             ||||||||||| ||||||||||||
Sbjct: 80597 ctgcatcttctctgggattttcag 80620



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>emb|AL589794.7| Human DNA sequence from clone RP11-564C4 on chromosome 10 Contains the 3'
              end of the gene for apobec-1 complementation factor (ACF)
              (ASP), the gene for a novel protein similar to
              N-acylsphingosine amidohydrolase (non-lysosomal ceramidase)
              2 (ASAH2), the cathepsin L-like 2 (CTSLL2) pseudogene,
              three novel pseudogenes (KIAA1553), a novel gene, a protein
              geranylgeranyltransferase type I beta subunit (PGGT1B)
              pseudogene and a CpG island, complete sequence
          Length = 178899

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 279    ctgcatcttctgtgggattttcag 302
              ||||||||||| ||||||||||||
Sbjct: 141677 ctgcatcttctctgggattttcag 141654



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>emb|AL512366.12| Human DNA sequence from clone RP11-449O16 on chromosome 10 Contains
            the gene for apobec-1 complementation factor (ACF) (ASP)
            and the 3' end of a variant of the gene for a novel
            protein similar to N-acylsphingosine amidohydrolase
            (non-lysosomal ceramidase) 2 (ASAH2), complete sequence
          Length = 175849

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 279  ctgcatcttctgtgggattttcag 302
            ||||||||||| ||||||||||||
Sbjct: 4683 ctgcatcttctctgggattttcag 4660



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>emb|AL450382.7| Human DNA sequence from clone RP11-56A21 on chromosome 10 Contains part
             of gene FLJ10824, a solute carrier family 9
             (sodium/hydrogen exchanger) isoform 5 (SLC9A5) pseudogene,
             the ASAH2 gene for N-acylsphingosine amidohydrolase
             (non-lysosomal ceramidase) 2 and a dynein cytoplasmic
             intermediate polypeptide 2 (DNCI2) pseudogene, complete
             sequence
          Length = 162228

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 279   ctgcatcttctgtgggattttcag 302
             ||||||||||| ||||||||||||
Sbjct: 33888 ctgcatcttctctgggattttcag 33911



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>emb|AL356364.18| Human DNA sequence from clone RP11-328I22 on chromosome 1 Contains a
             novel gene (LOC388739) and a CpG island, complete sequence
          Length = 102634

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 487   tgcatatttatctttttctc 506
             ||||||||||||||||||||
Sbjct: 63895 tgcatatttatctttttctc 63876



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>emb|AL031943.11|HS223B1 Human DNA sequence from clone RP1-223B1 on chromosome 6p24.1-25.3
             Contains the 3' end of a putative novel gene, complete
             sequence
          Length = 126281

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   gggagccagaattcagggag 144
             ||||||||||||||||||||
Sbjct: 90103 gggagccagaattcagggag 90084



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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 258     accatcgcccaaggttcctg 277
               ||||||||||||||||||||
Sbjct: 2336323 accatcgcccaaggttcctg 2336304



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>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome
          Length = 1900521

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     gtgacagggttatcagggtc 397
               ||||||||||||||||||||
Sbjct: 1580081 gtgacagggttatcagggtc 1580062



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>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
          Length = 1894275

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    gtgacagggttatcagggtc 397
              ||||||||||||||||||||
Sbjct: 316789 gtgacagggttatcagggtc 316808



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>gb|AC069018.17|AC069018 Mus musculus  BAC MGS3-563C15 (Genome Systems Mouse BAC Library) complete
              sequence
          Length = 157665

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    tagagtgatctgtgtgttca 365
              ||||||||||||||||||||
Sbjct: 143580 tagagtgatctgtgtgttca 143599



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>dbj|AB164396.1| Hordeum vulgare HvMS mRNA for methionine synthase, complete cds
          Length = 2558

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 196 gacggcaccgagcatggcgg 215
           ||||||||||||||||||||
Sbjct: 242 gacggcaccgagcatggcgg 223



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>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0534H07
          Length = 144689

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 356  tgtgtgttcatcaaccatat 375
            ||||||||||||||||||||
Sbjct: 9885 tgtgtgttcatcaaccatat 9904



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>gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J4 genomic sequence, complete
             sequence
          Length = 103157

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 450   tgatatgcttgtatagttgcatgc 473
             |||||| |||||||||||||||||
Sbjct: 50414 tgatatacttgtatagttgcatgc 50437



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>gb|AC027134.4|AC027134 Arabidopsis thaliana chromosome I BAC F13B4 genomic sequence,
            complete sequence
          Length = 102183

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 450  tgatatgcttgtatagttgcatgc 473
            |||||| |||||||||||||||||
Sbjct: 3107 tgatatacttgtatagttgcatgc 3130



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>ref|XM_953459.1| Neurospora crassa OR74A hypothetical protein (NCU09048.1) partial
            mRNA
          Length = 3318

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 521  ttgttgatgtggccgtattc 540
            ||||||||||||||||||||
Sbjct: 1964 ttgttgatgtggccgtattc 1945



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>emb|AL929407.16| Mouse DNA sequence from clone RP23-99C16 on chromosome 2, complete
             sequence
          Length = 144566

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 487   tgcatatttatctttttctc 506
             ||||||||||||||||||||
Sbjct: 35535 tgcatatttatctttttctc 35554



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>dbj|AP001815.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-97D10, complete
             sequence
          Length = 167653

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 480   ggtgctatgcatatttatcttttt 503
             |||||||||||||||| |||||||
Sbjct: 92802 ggtgctatgcatatttttcttttt 92779



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>ref|NG_001480.1| Mus musculus ubiquitin-activating enzyme E1, Chr Y-1, pseudogene 2
           (Ube1y1-ps2) on chromosome Y
 gb|U09054.1|MMU09054 Mus musculus BALB/c Ancr Ube1y-p2 pseudogene, partial sequence
          Length = 1221

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 346 tagagtgatctgtgtgttca 365
           ||||||||||||||||||||
Sbjct: 739 tagagtgatctgtgtgttca 758



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>gb|AC155902.1| Loxodonta africana, clone Loxodonta africana-6767875L18, complete
             sequence
          Length = 37635

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   aaccatatgtgtgacagggt 387
             ||||||||||||||||||||
Sbjct: 10575 aaccatatgtgtgacagggt 10556



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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 125     gggagccagaattcagggag 144
               ||||||||||||||||||||
Sbjct: 1007783 gggagccagaattcagggag 1007802


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 106,141,191
Number of extensions: 5536174
Number of successful extensions: 106982
Number of sequences better than 10.0: 48
Number of HSP's gapped: 106982
Number of HSP's successfully gapped: 48
Length of query: 664
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 642
Effective length of database: 18,508,616,841
Effective search space: 11882532011922
Effective search space used: 11882532011922
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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