ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf47m21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ496575.1|HVU496575 Hordeum vulgare mRNA for putative CENP-E like kinetochore protein (cpel1 gene) Length = 2241 Score = 4181 bits (2109), Expect = 0.0 Identities = 2123/2130 (99%) Strand = Plus / Plus Query: 24 cccgtaacctccccccgcctccatctccattcctgccgtgccaaggtctggctgccgctg 83 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cccgtaacctccccccgcctccatctccattcctgccgtgccaaggtctggctgccgctg 60 Query: 84 ctgctcgaggtggtggtcggacggatctccggtgaacctcggcctgcataacagggagga 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ctgctcgaggtggtggtcggacggatctccggtgaacctcggcctgcataacagggagga 120 Query: 144 ttttcttatattctggtgaagatgaaaggaactcaagggtcgcaattnnnnnnntcccgt 203 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 121 ttttcttatattctggtgaagatgaaaggaactcaagggtcgcaattaaaaaaatcccgt 180 Query: 204 tcatggtggtgggatggccacattagtccagaaaactccaagtggctctcagagaactta 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tcatggtggtgggatggccacattagtccagaaaactccaagtggctctcagagaactta 240 Query: 264 caagagatggagatgcaagtgaaagagattctgggacttgttgaagaggaaggtgaatcc 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 caagagatggagatgcaagtgaaagagattctgggacttgttgaagaggaaggtgaatcc 300 Query: 324 tctacagaaagggctgaggtgtattaccaagatcgacatgtgcttgttgcccacataaaa 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tctacagaaagggctgaggtgtattaccaagatcgacatgtgcttgttgcccacataaaa 360 Query: 384 aatgtctatcgcatgtatcgcacccttgctgagcggtatgacaatgtaactggagaactg 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aatgtctatcgcatgtatcgcacccttgctgagcggtatgacaatgtaactggagaactg 420 Query: 444 cggaaaaatatcccatcatcactgcaaccacatggctcttttggtgcccctgaatcagat 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 cggaaaaatatcccatcatcactgcaaccacatggctcttttggtgcccctgaatcagat 480 Query: 504 tctgagacacagtctcctccatctacagagcaaaagccaaaaactcgatcagattgcttt 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 tctgagacacagtctcctccatctacagagcaaaagccaaaaactcgatcagattgcttt 540 Query: 564 gatgtgtccattggctctggtgtgagctctgacgtatccaagaaggggagtgatgggtct 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gatgtgtccattggctctggtgtgagctctgacgtatccaagaaggggagtgatgggtct 600 Query: 624 tcatcgtcttcagagtctgagtcagagcttgatgaaagcaaagaggaaaatggcaacagc 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 tcatcgtcttcagagtctgagtcagagcttgatgaaagcaaagaggaaaatggcaacagc 660 Query: 684 atgttttatgccttgagccaaagaattattgagcttgaagatgagcttcttgaaacaagg 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 atgttttatgccttgagccaaagaattattgagcttgaagatgagcttcttgaaacaagg 720 Query: 744 ggaaaacttgatgctttagaggacaagaatactatctcagaagtgcctgaacatgatgaa 803 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 ggaaaacttgatgctttagaggacaagaatactatctcagaagtgcctgaacatgatgaa 780 Query: 804 aaactgcgggaggatcttgaagaagtcaacagtgtgaaggaagcattggaagctgcggtg 863 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 aaactgcgggaggatcttgaagaagtcaacagtgtgaaggaagcattggaagctgcggtg 840 Query: 864 ttggcaaacaaaaatgagactgatgggctgaaggaagcaatagcctcagcagctaaacag 923 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 ttggcaaacaaaaatgagactgatgggctgaaggaagcaatagcctcagcagctaaacag 900 Query: 924 tttgaaattgaattggcgcatcgtgatcttgaagttgacaagtgcaagcaggagcttgta 983 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 tttgaaattgaattggcgcatcgtgatcttgaagttgacaagtgcaagcaggagcttgta 960 Query: 984 gaactttcagcgaagtatctgcatgataaatctgctcttgaggctgagattggaatgctc 1043 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 gaactttcagcgaagtatctgcatgataaatctgctcttgaggctgagattggaatgctc 1020 Query: 1044 caaggagttatcacaaattctgaaggtgagctagcaaaattgtcacaggagaagttgcag 1103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 caaggagttatcacaaattctgaaggtgagctagcaaaattgtcacaggagaagttgcag 1080 Query: 1104 ctcgggtctcgggttgaagagctagaagaggcagcaggctgcttagattattcagcttcc 1163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 ctcgggtctcgggttgaagagctagaagaggcagcaggctgcttagattattcagcttcc 1140 Query: 1164 gaggtggtgaagctgcaagaggcaataaagaatacaaaagcagaacttgaggaagttcta 1223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 gaggtggtgaagctgcaagaggcaataaagaatacaaaagcagaacttgaggaagttcta 1200 Query: 1224 ctggagaaagaagtaaccatcaagaacctagaagcacagctagaaatatccttacaagag 1283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ctggagaaagaagtaaccatcaagaacctagaagcacagctagaaatatccttacaagag 1260 Query: 1284 aaatcaatactccaggaccgtattgaggagctggagagggtggtgtgtgcttctgtggaa 1343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 aaatcaatactccaggaccgtattgaggagctggagagggtggtgtgtgcttctgtggaa 1320 Query: 1344 aaacatactctggagaagtctgatcttagcgctgaactttcaacactatcagaagccaat 1403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 aaacatactctggagaagtctgatcttagcgctgaactttcaacactatcagaagccaat 1380 Query: 1404 gcctctctcgaaggcaagctggcatccagggaagcagagcttaagcacgcttatgctgac 1463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 gcctctctcgaaggcaagctggcatccagggaagcagagcttaagcacgcttatgctgac 1440 Query: 1464 agggaagcagaatacatggacagccagaaacatatttgtgagctgaatcaagaccttgcc 1523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1441 agggaagcagaatacatggacagccagaaacatatttgtgagctgaatcaagaccttgcc 1500 Query: 1524 aatcttacaagcaagcttgaactgatatcatcagagaaagtcacagttgaaaacaagctg 1583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1501 aatcttacaagcaagcttgaactgatatcatcagagaaagtcacagttgaaaacaagctg 1560 Query: 1584 gccactctactaactgacttcacagcacgtgaggaaaaggtgaaacagatgaatggccac 1643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1561 gccactctactaactgacttcacagcacgtgaggaaaaggtgaaacagatgaatggccac 1620 Query: 1644 cttagtcagcttcaaattgagcatgccaagatatcggcagagtctgctatcgtgcatgag 1703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1621 cttagtcagcttcaaattgagcatgccaagatatcggcagagtctgctatcgtgcatgag 1680 Query: 1704 tccctactggagctgcgcgctcaggtttctgagctcgaggaacttgtggagaagcagaac 1763 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1681 tccctactggagctgcgcgctcaggtttctgagctcgaggaacttgtggagaagcagaac 1740 Query: 1764 ctcgcgatctctgagagcgccgagggaaagcgtgaggcgattaggcagctgtgcttcacc 1823 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1741 ctcgcgatctctgagagcgccgagggaaagcgtgaggcgattaggcagctgtgcttcacc 1800 Query: 1824 cttgagcattaccgcagcaggtaccaggagctgcgcgagatgctgcagcagggccacagg 1883 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1801 cttgagcattaccgcagcaggtaccaggagctgcgcgagatgctgcagcagggccacagg 1860 Query: 1884 agaccacagatgctgatggcagcctgaccaagcgcgtccttcttgttcccaagatccttt 1943 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1861 agaccacagatgctgatggcagcctgaccaagcgcgtccttcttgttcccaagatccttt 1920 Query: 1944 tgtgcttatgaattgggttctgtagccttttcagttgagaagaactctgttatgtctatg 2003 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1921 tgtgcttatgaattgggttctgtagccttttcagttgagaagaactctgttatgtctatg 1980 Query: 2004 tgcaactgcaatgtaatgtgagaaccatgtcagtcatggctggcttgaaaagaaagaaaa 2063 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1981 tgcaactgcaatgtaatgtgagaaccatgtcagtcatggctggcttgaaaagaaagaaaa 2040 Query: 2064 gcaatcatgtccgtcgtcgtttgctctttgtcacttctgttacaatctcatcatatattc 2123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2041 gcaatcatgtccgtcgtcgtttgctctttgtcacttctgttacaatctcatcatatattc 2100 Query: 2124 aagatggtgaattctgtgttttggtctttg 2153 |||||||||||||||||||||||||||||| Sbjct: 2101 aagatggtgaattctgtgttttggtctttg 2130
>ref|NM_001061292.1| Oryza sativa (japonica cultivar-group) Os05g0168800 (Os05g0168800) mRNA, complete cds Length = 2519 Score = 236 bits (119), Expect = 3e-58 Identities = 209/239 (87%) Strand = Plus / Plus Query: 534 caaaagccaaaaactcgatcagattgctttgatgtgtccattggctctggtgtgagctct 593 ||||||| |||| | |||||||||||||||||||| || |||||||||||| |||| ||| Sbjct: 646 caaaagcaaaaaccgcgatcagattgctttgatgtttctattggctctggtatgagttct 705 Query: 594 gacgtatccaagaaggggagtgatgggtcttcatcgtcttcagagtctgagtcagagctt 653 ||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||| Sbjct: 706 gacgtatccaagaaggggagtgatgggtcttcatcatcttcagaatctgatttagagctt 765 Query: 654 gatgaaagcaaagaggaaaatggcaacagcatgttttatgccttgagccaaagaattatt 713 ||||| ||||| ||||||||||| ||||| ||||||||| | || |||| ||||||| Sbjct: 766 gatgaggctaaagaagaaaatggcaatagcattttttatgccctaagtcaaaaaattatt 825 Query: 714 gagcttgaagatgagcttcttgaaacaaggggaaaacttgatgctttagaggacaagaa 772 |||||||| |||||||||| |||| |||||| ||||||||||||| ||||| ||||| Sbjct: 826 gagcttgaggatgagcttcatgaagtaaggggtaaacttgatgcttccgaggaaaagaa 884 Score = 192 bits (97), Expect = 4e-45 Identities = 259/313 (82%) Strand = Plus / Plus Query: 814 aggatcttgaagaagtcaacagtgtgaaggaagcattggaagctgcggtgttggcaaaca 873 |||||||||| |||||||| |||| ||||||||||||||||||| || |||| |||| Sbjct: 980 aggatcttgatgaagtcaaaagtgaaaaggaagcattggaagctgttgtattggtgaaca 1039 Query: 874 aaaatgagactgatgggctgaaggaagcaatagcctcagcagctaaacagtttgaaattg 933 || |||| | |||| ||||||||||| |||| | || ||||| || ||||||||| ||| Sbjct: 1040 aagatgaaattgataggctgaaggaatcaatggtatcggcagccaagcagtttgaagttg 1099 Query: 934 aattggcgcatcgtgatcttgaagttgacaagtgcaagcaggagcttgtagaactttcag 993 || | |||||||||||| |||| |||| |||||||| |||||||||| | |||||| | Sbjct: 1100 aacttgcgcatcgtgatactgaaattgataagtgcaaacaggagcttgaggtactttcgg 1159 Query: 994 cgaagtatctgcatgataaatctgctcttgaggctgagattggaatgctccaaggagtta 1053 ||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||| | Sbjct: 1160 agaagtatctgcatgatatatctgctcttgaggctgaaattggaaagctccagggagtca 1219 Query: 1054 tcacaaattctgaaggtgagctagcaaaattgtcacaggagaagttgcagctcgggtctc 1113 ||| || | ||||| || | |||||| | ||||||||||| ||| ||||| |||| Sbjct: 1220 tcaaaacctttgaagacgactttgcaaaaatatcacaggagaaattgatgctcgaatctc 1279 Query: 1114 gggttgaagagct 1126 ||||||||||||| Sbjct: 1280 gggttgaagagct 1292 Score = 101 bits (51), Expect = 1e-17 Identities = 93/107 (86%) Strand = Plus / Plus Query: 1752 gagaagcagaacctcgcgatctctgagagcgccgagggaaagcgtgaggcgattaggcag 1811 |||| |||||| || | ||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1999 gagatgcagaagcttgtgatctctgagagcgccgaggggaagcgcgaggcgatcaggcaa 2058 Query: 1812 ctgtgcttcacccttgagcattaccgcagcaggtaccaggagctgcg 1858 ||||||||| | || ||||| ||||||||| | |||||||||||||| Sbjct: 2059 ctgtgcttctcactcgagcactaccgcagcggctaccaggagctgcg 2105 Score = 79.8 bits (40), Expect = 4e-11 Identities = 94/112 (83%) Strand = Plus / Plus Query: 415 agcggtatgacaatgtaactggagaactgcggaaaaatatcccatcatcactgcaaccac 474 |||| |||| |||||| ||||||||| |||| ||||||||||||||||| |||||| || Sbjct: 503 agcgatatggcaatgtgactggagaattgcgcaaaaatatcccatcatctctgcaatcat 562 Query: 475 atggctcttttggtgcccctgaatcagattctgagacacagtctcctccatc 526 || ||| ||||| | | ||||||||||||||| ||||||||||| |||| Sbjct: 563 ctgtctcctttggcatctcagaatcagattctgaggcacagtctccttcatc 614 Score = 65.9 bits (33), Expect = 6e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 204 tcatggtggtgggatggccacattagtccagaaaactccaagtggctctcagagaactta 263 ||||||||||||||| |||| ||||||||| ||| || ||||||||||| || |||||| Sbjct: 316 tcatggtggtgggatagccatattagtccaaaaagttctaagtggctctccgataactta 375 Query: 264 caagagatggaga 276 ||| |||||||| Sbjct: 376 gaagtgatggaga 388 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 1353 ctggagaagtctgatcttagcgctgaactttcaacactatcagaagccaatgcctctctc 1412 ||||||||||| ||| || ||||| ||||||| | |||| ||||||||||| ||||| Sbjct: 1600 ctggagaagtcctctctgagtgctgagctttcaaaattatctgaagccaatgcttctctt 1659 Query: 1413 gaaggcaagctggcatccagggaagcagagct 1444 |||| |||| |||||||| ||| |||||||| Sbjct: 1660 gaagccaagttggcatccgtggaggcagagct 1691 Score = 48.1 bits (24), Expect = 0.13 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1276 tacaagagaaatcaatactccaggaccgtattgaggagctggag 1319 |||| ||||||||| ||||||||||| | ||| ||||||||||| Sbjct: 1523 tacaggagaaatcagtactccaggacaggattaaggagctggag 1566 Score = 42.1 bits (21), Expect = 8.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 1585 ccactctactaactgacttcacagcacgtgaggaaaaggtgaaacagatgaatggccacc 1644 ||||||||||||| ||| ||||| | || || |||||| |||| |||||| ||| || | Sbjct: 1832 ccactctactaaccgacatcacaactcgcgatgaaaagatgaagcagatggatgatcaac 1891 Query: 1645 ttagtcagcttcaaattgagcatgccaag 1673 | | ||||||||| |||||||| ||||| Sbjct: 1892 tgaatcagcttcagcttgagcattccaag 1920
>gb|AC144741.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086E02, complete sequence Length = 150474 Score = 236 bits (119), Expect = 3e-58 Identities = 209/239 (87%) Strand = Plus / Minus Query: 534 caaaagccaaaaactcgatcagattgctttgatgtgtccattggctctggtgtgagctct 593 ||||||| |||| | |||||||||||||||||||| || |||||||||||| |||| ||| Sbjct: 148538 caaaagcaaaaaccgcgatcagattgctttgatgtttctattggctctggtatgagttct 148479 Query: 594 gacgtatccaagaaggggagtgatgggtcttcatcgtcttcagagtctgagtcagagctt 653 ||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||| Sbjct: 148478 gacgtatccaagaaggggagtgatgggtcttcatcatcttcagaatctgatttagagctt 148419 Query: 654 gatgaaagcaaagaggaaaatggcaacagcatgttttatgccttgagccaaagaattatt 713 ||||| ||||| ||||||||||| ||||| ||||||||| | || |||| ||||||| Sbjct: 148418 gatgaggctaaagaagaaaatggcaatagcattttttatgccctaagtcaaaaaattatt 148359 Query: 714 gagcttgaagatgagcttcttgaaacaaggggaaaacttgatgctttagaggacaagaa 772 |||||||| |||||||||| |||| |||||| ||||||||||||| ||||| ||||| Sbjct: 148358 gagcttgaggatgagcttcatgaagtaaggggtaaacttgatgcttccgaggaaaagaa 148300 Score = 192 bits (97), Expect = 4e-45 Identities = 259/313 (82%) Strand = Plus / Minus Query: 814 aggatcttgaagaagtcaacagtgtgaaggaagcattggaagctgcggtgttggcaaaca 873 |||||||||| |||||||| |||| ||||||||||||||||||| || |||| |||| Sbjct: 148204 aggatcttgatgaagtcaaaagtgaaaaggaagcattggaagctgttgtattggtgaaca 148145 Query: 874 aaaatgagactgatgggctgaaggaagcaatagcctcagcagctaaacagtttgaaattg 933 || |||| | |||| ||||||||||| |||| | || ||||| || ||||||||| ||| Sbjct: 148144 aagatgaaattgataggctgaaggaatcaatggtatcggcagccaagcagtttgaagttg 148085 Query: 934 aattggcgcatcgtgatcttgaagttgacaagtgcaagcaggagcttgtagaactttcag 993 || | |||||||||||| |||| |||| |||||||| |||||||||| | |||||| | Sbjct: 148084 aacttgcgcatcgtgatactgaaattgataagtgcaaacaggagcttgaggtactttcgg 148025 Query: 994 cgaagtatctgcatgataaatctgctcttgaggctgagattggaatgctccaaggagtta 1053 ||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||| | Sbjct: 148024 agaagtatctgcatgatatatctgctcttgaggctgaaattggaaagctccagggagtca 147965 Query: 1054 tcacaaattctgaaggtgagctagcaaaattgtcacaggagaagttgcagctcgggtctc 1113 ||| || | ||||| || | |||||| | ||||||||||| ||| ||||| |||| Sbjct: 147964 tcaaaacctttgaagacgactttgcaaaaatatcacaggagaaattgatgctcgaatctc 147905 Query: 1114 gggttgaagagct 1126 ||||||||||||| Sbjct: 147904 gggttgaagagct 147892 Score = 101 bits (51), Expect = 1e-17 Identities = 93/107 (86%) Strand = Plus / Minus Query: 1752 gagaagcagaacctcgcgatctctgagagcgccgagggaaagcgtgaggcgattaggcag 1811 |||| |||||| || | ||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 147185 gagatgcagaagcttgtgatctctgagagcgccgaggggaagcgcgaggcgatcaggcaa 147126 Query: 1812 ctgtgcttcacccttgagcattaccgcagcaggtaccaggagctgcg 1858 ||||||||| | || ||||| ||||||||| | |||||||||||||| Sbjct: 147125 ctgtgcttctcactcgagcactaccgcagcggctaccaggagctgcg 147079 Score = 79.8 bits (40), Expect = 4e-11 Identities = 94/112 (83%) Strand = Plus / Minus Query: 415 agcggtatgacaatgtaactggagaactgcggaaaaatatcccatcatcactgcaaccac 474 |||| |||| |||||| ||||||||| |||| ||||||||||||||||| |||||| || Sbjct: 148681 agcgatatggcaatgtgactggagaattgcgcaaaaatatcccatcatctctgcaatcat 148622 Query: 475 atggctcttttggtgcccctgaatcagattctgagacacagtctcctccatc 526 || ||| ||||| | | ||||||||||||||| ||||||||||| |||| Sbjct: 148621 ctgtctcctttggcatctcagaatcagattctgaggcacagtctccttcatc 148570 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 1353 ctggagaagtctgatcttagcgctgaactttcaacactatcagaagccaatgcctctctc 1412 ||||||||||| ||| || ||||| ||||||| | |||| ||||||||||| ||||| Sbjct: 147584 ctggagaagtcctctctgagtgctgagctttcaaaattatctgaagccaatgcttctctt 147525 Query: 1413 gaaggcaagctggcatccagggaagcagagct 1444 |||| |||| |||||||| ||| |||||||| Sbjct: 147524 gaagccaagttggcatccgtggaggcagagct 147493 Score = 56.0 bits (28), Expect = 6e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 204 tcatggtggtgggatggccacattagtccagaaaactccaagtggctctcagagaactta 263 ||||||||||||||| |||| ||||||||| ||| || ||||||||||| || |||||| Sbjct: 149045 tcatggtggtgggatagccatattagtccaaaaagttctaagtggctctccgataactta 148986 Score = 48.1 bits (24), Expect = 0.13 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1276 tacaagagaaatcaatactccaggaccgtattgaggagctggag 1319 |||| ||||||||| ||||||||||| | ||| ||||||||||| Sbjct: 147661 tacaggagaaatcagtactccaggacaggattaaggagctggag 147618 Score = 42.1 bits (21), Expect = 8.3 Identities = 72/89 (80%) Strand = Plus / Minus Query: 1585 ccactctactaactgacttcacagcacgtgaggaaaaggtgaaacagatgaatggccacc 1644 ||||||||||||| ||| ||||| | || || |||||| |||| |||||| ||| || | Sbjct: 147352 ccactctactaaccgacatcacaactcgcgatgaaaagatgaagcagatggatgatcaac 147293 Query: 1645 ttagtcagcttcaaattgagcatgccaag 1673 | | ||||||||| |||||||| ||||| Sbjct: 147292 tgaatcagcttcagcttgagcattccaag 147264
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 236 bits (119), Expect = 3e-58 Identities = 209/239 (87%) Strand = Plus / Minus Query: 534 caaaagccaaaaactcgatcagattgctttgatgtgtccattggctctggtgtgagctct 593 ||||||| |||| | |||||||||||||||||||| || |||||||||||| |||| ||| Sbjct: 46705 caaaagcaaaaaccgcgatcagattgctttgatgtttctattggctctggtatgagttct 46646 Query: 594 gacgtatccaagaaggggagtgatgggtcttcatcgtcttcagagtctgagtcagagctt 653 ||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||| Sbjct: 46645 gacgtatccaagaaggggagtgatgggtcttcatcatcttcagaatctgatttagagctt 46586 Query: 654 gatgaaagcaaagaggaaaatggcaacagcatgttttatgccttgagccaaagaattatt 713 ||||| ||||| ||||||||||| ||||| ||||||||| | || |||| ||||||| Sbjct: 46585 gatgaggctaaagaagaaaatggcaatagcattttttatgccctaagtcaaaaaattatt 46526 Query: 714 gagcttgaagatgagcttcttgaaacaaggggaaaacttgatgctttagaggacaagaa 772 |||||||| |||||||||| |||| |||||| ||||||||||||| ||||| ||||| Sbjct: 46525 gagcttgaggatgagcttcatgaagtaaggggtaaacttgatgcttccgaggaaaagaa 46467 Score = 192 bits (97), Expect = 4e-45 Identities = 259/313 (82%) Strand = Plus / Minus Query: 814 aggatcttgaagaagtcaacagtgtgaaggaagcattggaagctgcggtgttggcaaaca 873 |||||||||| |||||||| |||| ||||||||||||||||||| || |||| |||| Sbjct: 46371 aggatcttgatgaagtcaaaagtgaaaaggaagcattggaagctgttgtattggtgaaca 46312 Query: 874 aaaatgagactgatgggctgaaggaagcaatagcctcagcagctaaacagtttgaaattg 933 || |||| | |||| ||||||||||| |||| | || ||||| || ||||||||| ||| Sbjct: 46311 aagatgaaattgataggctgaaggaatcaatggtatcggcagccaagcagtttgaagttg 46252 Query: 934 aattggcgcatcgtgatcttgaagttgacaagtgcaagcaggagcttgtagaactttcag 993 || | |||||||||||| |||| |||| |||||||| |||||||||| | |||||| | Sbjct: 46251 aacttgcgcatcgtgatactgaaattgataagtgcaaacaggagcttgaggtactttcgg 46192 Query: 994 cgaagtatctgcatgataaatctgctcttgaggctgagattggaatgctccaaggagtta 1053 ||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||| | Sbjct: 46191 agaagtatctgcatgatatatctgctcttgaggctgaaattggaaagctccagggagtca 46132 Query: 1054 tcacaaattctgaaggtgagctagcaaaattgtcacaggagaagttgcagctcgggtctc 1113 ||| || | ||||| || | |||||| | ||||||||||| ||| ||||| |||| Sbjct: 46131 tcaaaacctttgaagacgactttgcaaaaatatcacaggagaaattgatgctcgaatctc 46072 Query: 1114 gggttgaagagct 1126 ||||||||||||| Sbjct: 46071 gggttgaagagct 46059 Score = 101 bits (51), Expect = 1e-17 Identities = 93/107 (86%) Strand = Plus / Minus Query: 1752 gagaagcagaacctcgcgatctctgagagcgccgagggaaagcgtgaggcgattaggcag 1811 |||| |||||| || | ||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 45352 gagatgcagaagcttgtgatctctgagagcgccgaggggaagcgcgaggcgatcaggcaa 45293 Query: 1812 ctgtgcttcacccttgagcattaccgcagcaggtaccaggagctgcg 1858 ||||||||| | || ||||| ||||||||| | |||||||||||||| Sbjct: 45292 ctgtgcttctcactcgagcactaccgcagcggctaccaggagctgcg 45246 Score = 79.8 bits (40), Expect = 4e-11 Identities = 94/112 (83%) Strand = Plus / Minus Query: 415 agcggtatgacaatgtaactggagaactgcggaaaaatatcccatcatcactgcaaccac 474 |||| |||| |||||| ||||||||| |||| ||||||||||||||||| |||||| || Sbjct: 46848 agcgatatggcaatgtgactggagaattgcgcaaaaatatcccatcatctctgcaatcat 46789 Query: 475 atggctcttttggtgcccctgaatcagattctgagacacagtctcctccatc 526 || ||| ||||| | | ||||||||||||||| ||||||||||| |||| Sbjct: 46788 ctgtctcctttggcatctcagaatcagattctgaggcacagtctccttcatc 46737 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 1353 ctggagaagtctgatcttagcgctgaactttcaacactatcagaagccaatgcctctctc 1412 ||||||||||| ||| || ||||| ||||||| | |||| ||||||||||| ||||| Sbjct: 45751 ctggagaagtcctctctgagtgctgagctttcaaaattatctgaagccaatgcttctctt 45692 Query: 1413 gaaggcaagctggcatccagggaagcagagct 1444 |||| |||| |||||||| ||| |||||||| Sbjct: 45691 gaagccaagttggcatccgtggaggcagagct 45660 Score = 56.0 bits (28), Expect = 6e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 204 tcatggtggtgggatggccacattagtccagaaaactccaagtggctctcagagaactta 263 ||||||||||||||| |||| ||||||||| ||| || ||||||||||| || |||||| Sbjct: 47212 tcatggtggtgggatagccatattagtccaaaaagttctaagtggctctccgataactta 47153 Score = 48.1 bits (24), Expect = 0.13 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1276 tacaagagaaatcaatactccaggaccgtattgaggagctggag 1319 |||| ||||||||| ||||||||||| | ||| ||||||||||| Sbjct: 45828 tacaggagaaatcagtactccaggacaggattaaggagctggag 45785 Score = 42.1 bits (21), Expect = 8.3 Identities = 72/89 (80%) Strand = Plus / Minus Query: 1585 ccactctactaactgacttcacagcacgtgaggaaaaggtgaaacagatgaatggccacc 1644 ||||||||||||| ||| ||||| | || || |||||| |||| |||||| ||| || | Sbjct: 45519 ccactctactaaccgacatcacaactcgcgatgaaaagatgaagcagatggatgatcaac 45460 Query: 1645 ttagtcagcttcaaattgagcatgccaag 1673 | | ||||||||| |||||||| ||||| Sbjct: 45459 tgaatcagcttcagcttgagcattccaag 45431
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 236 bits (119), Expect = 3e-58 Identities = 209/239 (87%) Strand = Plus / Minus Query: 534 caaaagccaaaaactcgatcagattgctttgatgtgtccattggctctggtgtgagctct 593 ||||||| |||| | |||||||||||||||||||| || |||||||||||| |||| ||| Sbjct: 4072011 caaaagcaaaaaccgcgatcagattgctttgatgtttctattggctctggtatgagttct 4071952 Query: 594 gacgtatccaagaaggggagtgatgggtcttcatcgtcttcagagtctgagtcagagctt 653 ||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||| Sbjct: 4071951 gacgtatccaagaaggggagtgatgggtcttcatcatcttcagaatctgatttagagctt 4071892 Query: 654 gatgaaagcaaagaggaaaatggcaacagcatgttttatgccttgagccaaagaattatt 713 ||||| ||||| ||||||||||| ||||| ||||||||| | || |||| ||||||| Sbjct: 4071891 gatgaggctaaagaagaaaatggcaatagcattttttatgccctaagtcaaaaaattatt 4071832 Query: 714 gagcttgaagatgagcttcttgaaacaaggggaaaacttgatgctttagaggacaagaa 772 |||||||| |||||||||| |||| |||||| ||||||||||||| ||||| ||||| Sbjct: 4071831 gagcttgaggatgagcttcatgaagtaaggggtaaacttgatgcttccgaggaaaagaa 4071773 Score = 192 bits (97), Expect = 4e-45 Identities = 259/313 (82%) Strand = Plus / Minus Query: 814 aggatcttgaagaagtcaacagtgtgaaggaagcattggaagctgcggtgttggcaaaca 873 |||||||||| |||||||| |||| ||||||||||||||||||| || |||| |||| Sbjct: 4071677 aggatcttgatgaagtcaaaagtgaaaaggaagcattggaagctgttgtattggtgaaca 4071618 Query: 874 aaaatgagactgatgggctgaaggaagcaatagcctcagcagctaaacagtttgaaattg 933 || |||| | |||| ||||||||||| |||| | || ||||| || ||||||||| ||| Sbjct: 4071617 aagatgaaattgataggctgaaggaatcaatggtatcggcagccaagcagtttgaagttg 4071558 Query: 934 aattggcgcatcgtgatcttgaagttgacaagtgcaagcaggagcttgtagaactttcag 993 || | |||||||||||| |||| |||| |||||||| |||||||||| | |||||| | Sbjct: 4071557 aacttgcgcatcgtgatactgaaattgataagtgcaaacaggagcttgaggtactttcgg 4071498 Query: 994 cgaagtatctgcatgataaatctgctcttgaggctgagattggaatgctccaaggagtta 1053 ||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||| | Sbjct: 4071497 agaagtatctgcatgatatatctgctcttgaggctgaaattggaaagctccagggagtca 4071438 Query: 1054 tcacaaattctgaaggtgagctagcaaaattgtcacaggagaagttgcagctcgggtctc 1113 ||| || | ||||| || | |||||| | ||||||||||| ||| ||||| |||| Sbjct: 4071437 tcaaaacctttgaagacgactttgcaaaaatatcacaggagaaattgatgctcgaatctc 4071378 Query: 1114 gggttgaagagct 1126 ||||||||||||| Sbjct: 4071377 gggttgaagagct 4071365 Score = 101 bits (51), Expect = 1e-17 Identities = 93/107 (86%) Strand = Plus / Minus Query: 1752 gagaagcagaacctcgcgatctctgagagcgccgagggaaagcgtgaggcgattaggcag 1811 |||| |||||| || | ||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 4070658 gagatgcagaagcttgtgatctctgagagcgccgaggggaagcgcgaggcgatcaggcaa 4070599 Query: 1812 ctgtgcttcacccttgagcattaccgcagcaggtaccaggagctgcg 1858 ||||||||| | || ||||| ||||||||| | |||||||||||||| Sbjct: 4070598 ctgtgcttctcactcgagcactaccgcagcggctaccaggagctgcg 4070552 Score = 79.8 bits (40), Expect = 4e-11 Identities = 94/112 (83%) Strand = Plus / Minus Query: 415 agcggtatgacaatgtaactggagaactgcggaaaaatatcccatcatcactgcaaccac 474 |||| |||| |||||| ||||||||| |||| ||||||||||||||||| |||||| || Sbjct: 4072154 agcgatatggcaatgtgactggagaattgcgcaaaaatatcccatcatctctgcaatcat 4072095 Query: 475 atggctcttttggtgcccctgaatcagattctgagacacagtctcctccatc 526 || ||| ||||| | | ||||||||||||||| ||||||||||| |||| Sbjct: 4072094 ctgtctcctttggcatctcagaatcagattctgaggcacagtctccttcatc 4072043 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 1353 ctggagaagtctgatcttagcgctgaactttcaacactatcagaagccaatgcctctctc 1412 ||||||||||| ||| || ||||| ||||||| | |||| ||||||||||| ||||| Sbjct: 4071057 ctggagaagtcctctctgagtgctgagctttcaaaattatctgaagccaatgcttctctt 4070998 Query: 1413 gaaggcaagctggcatccagggaagcagagct 1444 |||| |||| |||||||| ||| |||||||| Sbjct: 4070997 gaagccaagttggcatccgtggaggcagagct 4070966 Score = 56.0 bits (28), Expect = 6e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 204 tcatggtggtgggatggccacattagtccagaaaactccaagtggctctcagagaactta 263 ||||||||||||||| |||| ||||||||| ||| || ||||||||||| || |||||| Sbjct: 4072518 tcatggtggtgggatagccatattagtccaaaaagttctaagtggctctccgataactta 4072459 Score = 48.1 bits (24), Expect = 0.13 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1276 tacaagagaaatcaatactccaggaccgtattgaggagctggag 1319 |||| ||||||||| ||||||||||| | ||| ||||||||||| Sbjct: 4071134 tacaggagaaatcagtactccaggacaggattaaggagctggag 4071091 Score = 42.1 bits (21), Expect = 8.3 Identities = 72/89 (80%) Strand = Plus / Minus Query: 1585 ccactctactaactgacttcacagcacgtgaggaaaaggtgaaacagatgaatggccacc 1644 ||||||||||||| ||| ||||| | || || |||||| |||| |||||| ||| || | Sbjct: 4070825 ccactctactaaccgacatcacaactcgcgatgaaaagatgaagcagatggatgatcaac 4070766 Query: 1645 ttagtcagcttcaaattgagcatgccaag 1673 | | ||||||||| |||||||| ||||| Sbjct: 4070765 tgaatcagcttcagcttgagcattccaag 4070737
>dbj|AK101183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029G04, full insert sequence Length = 2520 Score = 236 bits (119), Expect = 3e-58 Identities = 209/239 (87%) Strand = Plus / Plus Query: 534 caaaagccaaaaactcgatcagattgctttgatgtgtccattggctctggtgtgagctct 593 ||||||| |||| | |||||||||||||||||||| || |||||||||||| |||| ||| Sbjct: 647 caaaagcaaaaaccgcgatcagattgctttgatgtttctattggctctggtatgagttct 706 Query: 594 gacgtatccaagaaggggagtgatgggtcttcatcgtcttcagagtctgagtcagagctt 653 ||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||| Sbjct: 707 gacgtatccaagaaggggagtgatgggtcttcatcatcttcagaatctgatttagagctt 766 Query: 654 gatgaaagcaaagaggaaaatggcaacagcatgttttatgccttgagccaaagaattatt 713 ||||| ||||| ||||||||||| ||||| ||||||||| | || |||| ||||||| Sbjct: 767 gatgaggctaaagaagaaaatggcaatagcattttttatgccctaagtcaaaaaattatt 826 Query: 714 gagcttgaagatgagcttcttgaaacaaggggaaaacttgatgctttagaggacaagaa 772 |||||||| |||||||||| |||| |||||| ||||||||||||| ||||| ||||| Sbjct: 827 gagcttgaggatgagcttcatgaagtaaggggtaaacttgatgcttccgaggaaaagaa 885 Score = 192 bits (97), Expect = 4e-45 Identities = 259/313 (82%) Strand = Plus / Plus Query: 814 aggatcttgaagaagtcaacagtgtgaaggaagcattggaagctgcggtgttggcaaaca 873 |||||||||| |||||||| |||| ||||||||||||||||||| || |||| |||| Sbjct: 981 aggatcttgatgaagtcaaaagtgaaaaggaagcattggaagctgttgtattggtgaaca 1040 Query: 874 aaaatgagactgatgggctgaaggaagcaatagcctcagcagctaaacagtttgaaattg 933 || |||| | |||| ||||||||||| |||| | || ||||| || ||||||||| ||| Sbjct: 1041 aagatgaaattgataggctgaaggaatcaatggtatcggcagccaagcagtttgaagttg 1100 Query: 934 aattggcgcatcgtgatcttgaagttgacaagtgcaagcaggagcttgtagaactttcag 993 || | |||||||||||| |||| |||| |||||||| |||||||||| | |||||| | Sbjct: 1101 aacttgcgcatcgtgatactgaaattgataagtgcaaacaggagcttgaggtactttcgg 1160 Query: 994 cgaagtatctgcatgataaatctgctcttgaggctgagattggaatgctccaaggagtta 1053 ||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||| | Sbjct: 1161 agaagtatctgcatgatatatctgctcttgaggctgaaattggaaagctccagggagtca 1220 Query: 1054 tcacaaattctgaaggtgagctagcaaaattgtcacaggagaagttgcagctcgggtctc 1113 ||| || | ||||| || | |||||| | ||||||||||| ||| ||||| |||| Sbjct: 1221 tcaaaacctttgaagacgactttgcaaaaatatcacaggagaaattgatgctcgaatctc 1280 Query: 1114 gggttgaagagct 1126 ||||||||||||| Sbjct: 1281 gggttgaagagct 1293 Score = 101 bits (51), Expect = 1e-17 Identities = 93/107 (86%) Strand = Plus / Plus Query: 1752 gagaagcagaacctcgcgatctctgagagcgccgagggaaagcgtgaggcgattaggcag 1811 |||| |||||| || | ||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 2000 gagatgcagaagcttgtgatctctgagagcgccgaggggaagcgcgaggcgatcaggcaa 2059 Query: 1812 ctgtgcttcacccttgagcattaccgcagcaggtaccaggagctgcg 1858 ||||||||| | || ||||| ||||||||| | |||||||||||||| Sbjct: 2060 ctgtgcttctcactcgagcactaccgcagcggctaccaggagctgcg 2106 Score = 79.8 bits (40), Expect = 4e-11 Identities = 94/112 (83%) Strand = Plus / Plus Query: 415 agcggtatgacaatgtaactggagaactgcggaaaaatatcccatcatcactgcaaccac 474 |||| |||| |||||| ||||||||| |||| ||||||||||||||||| |||||| || Sbjct: 504 agcgatatggcaatgtgactggagaattgcgcaaaaatatcccatcatctctgcaatcat 563 Query: 475 atggctcttttggtgcccctgaatcagattctgagacacagtctcctccatc 526 || ||| ||||| | | ||||||||||||||| ||||||||||| |||| Sbjct: 564 ctgtctcctttggcatctcagaatcagattctgaggcacagtctccttcatc 615 Score = 65.9 bits (33), Expect = 6e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 204 tcatggtggtgggatggccacattagtccagaaaactccaagtggctctcagagaactta 263 ||||||||||||||| |||| ||||||||| ||| || ||||||||||| || |||||| Sbjct: 317 tcatggtggtgggatagccatattagtccaaaaagttctaagtggctctccgataactta 376 Query: 264 caagagatggaga 276 ||| |||||||| Sbjct: 377 gaagtgatggaga 389 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 1353 ctggagaagtctgatcttagcgctgaactttcaacactatcagaagccaatgcctctctc 1412 ||||||||||| ||| || ||||| ||||||| | |||| ||||||||||| ||||| Sbjct: 1601 ctggagaagtcctctctgagtgctgagctttcaaaattatctgaagccaatgcttctctt 1660 Query: 1413 gaaggcaagctggcatccagggaagcagagct 1444 |||| |||| |||||||| ||| |||||||| Sbjct: 1661 gaagccaagttggcatccgtggaggcagagct 1692 Score = 48.1 bits (24), Expect = 0.13 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1276 tacaagagaaatcaatactccaggaccgtattgaggagctggag 1319 |||| ||||||||| ||||||||||| | ||| ||||||||||| Sbjct: 1524 tacaggagaaatcagtactccaggacaggattaaggagctggag 1567 Score = 42.1 bits (21), Expect = 8.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 1585 ccactctactaactgacttcacagcacgtgaggaaaaggtgaaacagatgaatggccacc 1644 ||||||||||||| ||| ||||| | || || |||||| |||| |||||| ||| || | Sbjct: 1833 ccactctactaaccgacatcacaactcgcgatgaaaagatgaagcagatggatgatcaac 1892 Query: 1645 ttagtcagcttcaaattgagcatgccaag 1673 | | ||||||||| |||||||| ||||| Sbjct: 1893 tgaatcagcttcagcttgagcattccaag 1921
>dbj|AK101173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028P08, full insert sequence Length = 2325 Score = 236 bits (119), Expect = 3e-58 Identities = 209/239 (87%) Strand = Plus / Plus Query: 534 caaaagccaaaaactcgatcagattgctttgatgtgtccattggctctggtgtgagctct 593 ||||||| |||| | |||||||||||||||||||| || |||||||||||| |||| ||| Sbjct: 604 caaaagcaaaaaccgcgatcagattgctttgatgtttctattggctctggtatgagttct 663 Query: 594 gacgtatccaagaaggggagtgatgggtcttcatcgtcttcagagtctgagtcagagctt 653 ||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||| Sbjct: 664 gacgtatccaagaaggggagtgatgggtcttcatcatcttcagaatctgatttagagctt 723 Query: 654 gatgaaagcaaagaggaaaatggcaacagcatgttttatgccttgagccaaagaattatt 713 ||||| ||||| ||||||||||| ||||| ||||||||| | || |||| ||||||| Sbjct: 724 gatgaggctaaagaagaaaatggcaatagcattttttatgccctaagtcaaaaaattatt 783 Query: 714 gagcttgaagatgagcttcttgaaacaaggggaaaacttgatgctttagaggacaagaa 772 |||||||| |||||||||| |||| |||||| ||||||||||||| ||||| ||||| Sbjct: 784 gagcttgaggatgagcttcatgaagtaaggggtaaacttgatgcttccgaggaaaagaa 842 Score = 192 bits (97), Expect = 4e-45 Identities = 259/313 (82%) Strand = Plus / Plus Query: 814 aggatcttgaagaagtcaacagtgtgaaggaagcattggaagctgcggtgttggcaaaca 873 |||||||||| |||||||| |||| ||||||||||||||||||| || |||| |||| Sbjct: 938 aggatcttgatgaagtcaaaagtgaaaaggaagcattggaagctgttgtattggtgaaca 997 Query: 874 aaaatgagactgatgggctgaaggaagcaatagcctcagcagctaaacagtttgaaattg 933 || |||| | |||| ||||||||||| |||| | || ||||| || ||||||||| ||| Sbjct: 998 aagatgaaattgataggctgaaggaatcaatggtatcggcagccaagcagtttgaagttg 1057 Query: 934 aattggcgcatcgtgatcttgaagttgacaagtgcaagcaggagcttgtagaactttcag 993 || | |||||||||||| |||| |||| |||||||| |||||||||| | |||||| | Sbjct: 1058 aacttgcgcatcgtgatactgaaattgataagtgcaaacaggagcttgaggtactttcgg 1117 Query: 994 cgaagtatctgcatgataaatctgctcttgaggctgagattggaatgctccaaggagtta 1053 ||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||| | Sbjct: 1118 agaagtatctgcatgatatatctgctcttgaggctgaaattggaaagctccagggagtca 1177 Query: 1054 tcacaaattctgaaggtgagctagcaaaattgtcacaggagaagttgcagctcgggtctc 1113 ||| || | ||||| || | |||||| | ||||||||||| ||| ||||| |||| Sbjct: 1178 tcaaaacctttgaagacgactttgcaaaaatatcacaggagaaattgatgctcgaatctc 1237 Query: 1114 gggttgaagagct 1126 ||||||||||||| Sbjct: 1238 gggttgaagagct 1250 Score = 101 bits (51), Expect = 1e-17 Identities = 93/107 (86%) Strand = Plus / Plus Query: 1752 gagaagcagaacctcgcgatctctgagagcgccgagggaaagcgtgaggcgattaggcag 1811 |||| |||||| || | ||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1955 gagatgcagaagcttgtgatctctgagagcgccgaggggaagcgcgaggcgatcaggcaa 2014 Query: 1812 ctgtgcttcacccttgagcattaccgcagcaggtaccaggagctgcg 1858 ||||||||| | || ||||| ||||||||| | |||||||||||||| Sbjct: 2015 ctgtgcttctcactcgagcactaccgcagcggctaccaggagctgcg 2061 Score = 79.8 bits (40), Expect = 4e-11 Identities = 94/112 (83%) Strand = Plus / Plus Query: 415 agcggtatgacaatgtaactggagaactgcggaaaaatatcccatcatcactgcaaccac 474 |||| |||| |||||| ||||||||| |||| ||||||||||||||||| |||||| || Sbjct: 461 agcgatatggcaatgtgactggagaattgcgcaaaaatatcccatcatctctgcaatcat 520 Query: 475 atggctcttttggtgcccctgaatcagattctgagacacagtctcctccatc 526 || ||| ||||| | | ||||||||||||||| ||||||||||| |||| Sbjct: 521 ctgtctcctttggcatctcagaatcagattctgaggcacagtctccttcatc 572 Score = 65.9 bits (33), Expect = 6e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 204 tcatggtggtgggatggccacattagtccagaaaactccaagtggctctcagagaactta 263 ||||||||||||||| |||| ||||||||| ||| || ||||||||||| || |||||| Sbjct: 274 tcatggtggtgggatagccatattagtccaaaaagttctaagtggctctccgataactta 333 Query: 264 caagagatggaga 276 ||| |||||||| Sbjct: 334 gaagtgatggaga 346 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 1353 ctggagaagtctgatcttagcgctgaactttcaacactatcagaagccaatgcctctctc 1412 ||||||||||| ||| || ||||| ||||||| | |||| ||||||||||| ||||| Sbjct: 1556 ctggagaagtcctctctgagtgctgagctttcaaaattatctgaagccaatgcttctctt 1615 Query: 1413 gaaggcaagctggcatccagggaagcagagct 1444 |||| |||| |||||||| ||| |||||||| Sbjct: 1616 gaagccaagttggcatccgtggaggcagagct 1647 Score = 42.1 bits (21), Expect = 8.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 1585 ccactctactaactgacttcacagcacgtgaggaaaaggtgaaacagatgaatggccacc 1644 ||||||||||||| ||| ||||| | || || |||||| |||| |||||| ||| || | Sbjct: 1788 ccactctactaaccgacatcacaactcgcgatgaaaagatgaagcagatggatgatcaac 1847 Query: 1645 ttagtcagcttcaaattgagcatgccaag 1673 | | ||||||||| |||||||| ||||| Sbjct: 1848 tgaatcagcttcagcttgagcattccaag 1876
>dbj|AK062017.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F07, full insert sequence Length = 1675 Score = 192 bits (97), Expect = 4e-45 Identities = 259/313 (82%) Strand = Plus / Plus Query: 814 aggatcttgaagaagtcaacagtgtgaaggaagcattggaagctgcggtgttggcaaaca 873 |||||||||| |||||||| |||| ||||||||||||||||||| || |||| |||| Sbjct: 194 aggatcttgatgaagtcaaaagtgaaaaggaagcattggaagctgttgtattggtgaaca 253 Query: 874 aaaatgagactgatgggctgaaggaagcaatagcctcagcagctaaacagtttgaaattg 933 || |||| | |||| ||||||||||| |||| | || ||||| || ||||||||| ||| Sbjct: 254 aagatgaaattgataggctgaaggaatcaatggtatcggcagccaagcagtttgaagttg 313 Query: 934 aattggcgcatcgtgatcttgaagttgacaagtgcaagcaggagcttgtagaactttcag 993 || | |||||||||||| |||| |||| |||||||| |||||||||| | |||||| | Sbjct: 314 aacttgcgcatcgtgatactgaaattgataagtgcaaacaggagcttgaggtactttcgg 373 Query: 994 cgaagtatctgcatgataaatctgctcttgaggctgagattggaatgctccaaggagtta 1053 ||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||| | Sbjct: 374 agaagtatctgcatgatatatctgctcttgaggctgaaattggaaagctccagggagtca 433 Query: 1054 tcacaaattctgaaggtgagctagcaaaattgtcacaggagaagttgcagctcgggtctc 1113 ||| || | ||||| || | |||||| | ||||||||||| ||| ||||| |||| Sbjct: 434 tcaaaacctttgaagacgactttgcaaaaatatcacaggagaaattgatgctcgaatctc 493 Query: 1114 gggttgaagagct 1126 ||||||||||||| Sbjct: 494 gggttgaagagct 506 Score = 101 bits (51), Expect = 1e-17 Identities = 93/107 (86%) Strand = Plus / Plus Query: 1752 gagaagcagaacctcgcgatctctgagagcgccgagggaaagcgtgaggcgattaggcag 1811 |||| |||||| || | ||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1213 gagatgcagaagcttgtgatctctgagagcgccgaggggaagcgcgaggcgatcaggcaa 1272 Query: 1812 ctgtgcttcacccttgagcattaccgcagcaggtaccaggagctgcg 1858 ||||||||| | || ||||| ||||||||| | |||||||||||||| Sbjct: 1273 ctgtgcttctcactcgagcactaccgcagcggctaccaggagctgcg 1319 Score = 83.8 bits (42), Expect = 2e-12 Identities = 84/98 (85%) Strand = Plus / Plus Query: 675 ggcaacagcatgttttatgccttgagccaaagaattattgagcttgaagatgagcttctt 734 ||||| ||||| ||||||||| | || |||| ||||||||||||||| |||||||||| | Sbjct: 1 ggcaatagcattttttatgccctaagtcaaaaaattattgagcttgaggatgagcttcat 60 Query: 735 gaaacaaggggaaaacttgatgctttagaggacaagaa 772 ||| |||||| ||||||||||||| ||||| ||||| Sbjct: 61 gaagtaaggggtaaacttgatgcttccgaggaaaagaa 98 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 1353 ctggagaagtctgatcttagcgctgaactttcaacactatcagaagccaatgcctctctc 1412 ||||||||||| ||| || ||||| ||||||| | |||| ||||||||||| ||||| Sbjct: 814 ctggagaagtcctctctgagtgctgagctttcaaaattatctgaagccaatgcttctctt 873 Query: 1413 gaaggcaagctggcatccagggaagcagagct 1444 |||| |||| |||||||| ||| |||||||| Sbjct: 874 gaagccaagttggcatccgtggaggcagagct 905 Score = 48.1 bits (24), Expect = 0.13 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1276 tacaagagaaatcaatactccaggaccgtattgaggagctggag 1319 |||| ||||||||| ||||||||||| | ||| ||||||||||| Sbjct: 737 tacaggagaaatcagtactccaggacaggattaaggagctggag 780 Score = 42.1 bits (21), Expect = 8.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 1585 ccactctactaactgacttcacagcacgtgaggaaaaggtgaaacagatgaatggccacc 1644 ||||||||||||| ||| ||||| | || || |||||| |||| |||||| ||| || | Sbjct: 1046 ccactctactaaccgacatcacaactcgcgatgaaaagatgaagcagatggatgatcaac 1105 Query: 1645 ttagtcagcttcaaattgagcatgccaag 1673 | | ||||||||| |||||||| ||||| Sbjct: 1106 tgaatcagcttcagcttgagcattccaag 1134
>ref|NM_001048661.1| Oryza sativa (japonica cultivar-group) Os01g0168100 (Os01g0168100) mRNA, complete cds Length = 2182 Score = 63.9 bits (32), Expect = 2e-06 Identities = 110/136 (80%) Strand = Plus / Plus Query: 388 tctatcgcatgtatcgcacccttgctgagcggtatgacaatgtaactggagaactgcgga 447 |||| ||||||||||| | ||||| ||||| ||||||||||| ||||| ||| | || | Sbjct: 387 tctaccgcatgtatcgtgctcttgccgagcgttatgacaatgtgactggggaattacgca 446 Query: 448 aaaatatcccatcatcactgcaaccacatggctcttttggtgcccctgaatcagattctg 507 | ||||||||||| ||||| || |||| |||||| || | ||||||| ||||||| Sbjct: 447 agaatatcccatcgtcactccagtcacaaggctctcttagcatatctgaatctgattctg 506 Query: 508 agacacagtctcctcc 523 ||||||||||| |||| Sbjct: 507 agacacagtctgctcc 522 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1394 agaagccaatgcctctctcgaaggcaagctggcatcca 1431 |||||||||||| ||||| |||||||||||| |||||| Sbjct: 1432 agaagccaatgcttctcttgaaggcaagctgacatcca 1469 Score = 48.1 bits (24), Expect = 0.13 Identities = 75/92 (81%) Strand = Plus / Plus Query: 198 tcccgttcatggtggtgggatggccacattagtccagaaaactccaagtggctctcagag 257 |||| ||||||||||||||| |||| |||||||| | |||||||| ||| | | ||| Sbjct: 197 tcccattcatggtggtgggacagccatattagtcccaagaactccaaatggttagccgag 256 Query: 258 aacttacaagagatggagatgcaagtgaaaga 289 ||| || |||||||||| | |||||| ||||| Sbjct: 257 aacctagaagagatggataagcaagttaaaga 288 Score = 44.1 bits (22), Expect = 2.1 Identities = 52/62 (83%) Strand = Plus / Plus Query: 714 gagcttgaagatgagcttcttgaaacaaggggaaaacttgatgctttagaggacaagaat 773 ||||| ||||||||||||| ||| |||||| ||||||||| || | ||||| |||||| Sbjct: 746 gagctagaagatgagcttcaggaagcaagggaaaaacttgaggcacttgaggaaaagaat 805 Query: 774 ac 775 || Sbjct: 806 ac 807
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 63.9 bits (32), Expect = 2e-06 Identities = 110/136 (80%) Strand = Plus / Minus Query: 388 tctatcgcatgtatcgcacccttgctgagcggtatgacaatgtaactggagaactgcgga 447 |||| ||||||||||| | ||||| ||||| ||||||||||| ||||| ||| | || | Sbjct: 3480218 tctaccgcatgtatcgtgctcttgccgagcgttatgacaatgtgactggggaattacgca 3480159 Query: 448 aaaatatcccatcatcactgcaaccacatggctcttttggtgcccctgaatcagattctg 507 | ||||||||||| ||||| || |||| |||||| || | ||||||| ||||||| Sbjct: 3480158 agaatatcccatcgtcactccagtcacaaggctctcttagcatatctgaatctgattctg 3480099 Query: 508 agacacagtctcctcc 523 ||||||||||| |||| Sbjct: 3480098 agacacagtctgctcc 3480083 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1394 agaagccaatgcctctctcgaaggcaagctggcatcca 1431 |||||||||||| ||||| |||||||||||| |||||| Sbjct: 3479173 agaagccaatgcttctcttgaaggcaagctgacatcca 3479136 Score = 44.1 bits (22), Expect = 2.1 Identities = 52/62 (83%) Strand = Plus / Minus Query: 714 gagcttgaagatgagcttcttgaaacaaggggaaaacttgatgctttagaggacaagaat 773 ||||| ||||||||||||| ||| |||||| ||||||||| || | ||||| |||||| Sbjct: 3479859 gagctagaagatgagcttcaggaagcaagggaaaaacttgaggcacttgaggaaaagaat 3479800 Query: 774 ac 775 || Sbjct: 3479799 ac 3479798
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 63.9 bits (32), Expect = 2e-06 Identities = 110/136 (80%) Strand = Plus / Minus Query: 388 tctatcgcatgtatcgcacccttgctgagcggtatgacaatgtaactggagaactgcgga 447 |||| ||||||||||| | ||||| ||||| ||||||||||| ||||| ||| | || | Sbjct: 48286 tctaccgcatgtatcgtgctcttgccgagcgttatgacaatgtgactggggaattacgca 48227 Query: 448 aaaatatcccatcatcactgcaaccacatggctcttttggtgcccctgaatcagattctg 507 | ||||||||||| ||||| || |||| |||||| || | ||||||| ||||||| Sbjct: 48226 agaatatcccatcgtcactccagtcacaaggctctcttagcatatctgaatctgattctg 48167 Query: 508 agacacagtctcctcc 523 ||||||||||| |||| Sbjct: 48166 agacacagtctgctcc 48151 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1394 agaagccaatgcctctctcgaaggcaagctggcatcca 1431 |||||||||||| ||||| |||||||||||| |||||| Sbjct: 47241 agaagccaatgcttctcttgaaggcaagctgacatcca 47204 Score = 44.1 bits (22), Expect = 2.1 Identities = 52/62 (83%) Strand = Plus / Minus Query: 714 gagcttgaagatgagcttcttgaaacaaggggaaaacttgatgctttagaggacaagaat 773 ||||| ||||||||||||| ||| |||||| ||||||||| || | ||||| |||||| Sbjct: 47927 gagctagaagatgagcttcaggaagcaagggaaaaacttgaggcacttgaggaaaagaat 47868 Query: 774 ac 775 || Sbjct: 47867 ac 47866
>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0701D05 Length = 172161 Score = 63.9 bits (32), Expect = 2e-06 Identities = 110/136 (80%) Strand = Plus / Minus Query: 388 tctatcgcatgtatcgcacccttgctgagcggtatgacaatgtaactggagaactgcgga 447 |||| ||||||||||| | ||||| ||||| ||||||||||| ||||| ||| | || | Sbjct: 158588 tctaccgcatgtatcgtgctcttgccgagcgttatgacaatgtgactggggaattacgca 158529 Query: 448 aaaatatcccatcatcactgcaaccacatggctcttttggtgcccctgaatcagattctg 507 | ||||||||||| ||||| || |||| |||||| || | ||||||| ||||||| Sbjct: 158528 agaatatcccatcgtcactccagtcacaaggctctcttagcatatctgaatctgattctg 158469 Query: 508 agacacagtctcctcc 523 ||||||||||| |||| Sbjct: 158468 agacacagtctgctcc 158453 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1394 agaagccaatgcctctctcgaaggcaagctggcatcca 1431 |||||||||||| ||||| |||||||||||| |||||| Sbjct: 157543 agaagccaatgcttctcttgaaggcaagctgacatcca 157506 Score = 44.1 bits (22), Expect = 2.1 Identities = 52/62 (83%) Strand = Plus / Minus Query: 714 gagcttgaagatgagcttcttgaaacaaggggaaaacttgatgctttagaggacaagaat 773 ||||| ||||||||||||| ||| |||||| ||||||||| || | ||||| |||||| Sbjct: 158229 gagctagaagatgagcttcaggaagcaagggaaaaacttgaggcacttgaggaaaagaat 158170 Query: 774 ac 775 || Sbjct: 158169 ac 158168
>dbj|AK121992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109K22, full insert sequence Length = 2184 Score = 63.9 bits (32), Expect = 2e-06 Identities = 110/136 (80%) Strand = Plus / Plus Query: 388 tctatcgcatgtatcgcacccttgctgagcggtatgacaatgtaactggagaactgcgga 447 |||| ||||||||||| | ||||| ||||| ||||||||||| ||||| ||| | || | Sbjct: 389 tctaccgcatgtatcgtgctcttgccgagcgttatgacaatgtgactggggaattacgca 448 Query: 448 aaaatatcccatcatcactgcaaccacatggctcttttggtgcccctgaatcagattctg 507 | ||||||||||| ||||| || |||| |||||| || | ||||||| ||||||| Sbjct: 449 agaatatcccatcgtcactccagtcacaaggctctcttagcatatctgaatctgattctg 508 Query: 508 agacacagtctcctcc 523 ||||||||||| |||| Sbjct: 509 agacacagtctgctcc 524 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1394 agaagccaatgcctctctcgaaggcaagctggcatcca 1431 |||||||||||| ||||| |||||||||||| |||||| Sbjct: 1434 agaagccaatgcttctcttgaaggcaagctgacatcca 1471 Score = 48.1 bits (24), Expect = 0.13 Identities = 75/92 (81%) Strand = Plus / Plus Query: 198 tcccgttcatggtggtgggatggccacattagtccagaaaactccaagtggctctcagag 257 |||| ||||||||||||||| |||| |||||||| | |||||||| ||| | | ||| Sbjct: 199 tcccattcatggtggtgggacagccatattagtcccaagaactccaaatggttagccgag 258 Query: 258 aacttacaagagatggagatgcaagtgaaaga 289 ||| || |||||||||| | |||||| ||||| Sbjct: 259 aacctagaagagatggataagcaagttaaaga 290 Score = 44.1 bits (22), Expect = 2.1 Identities = 52/62 (83%) Strand = Plus / Plus Query: 714 gagcttgaagatgagcttcttgaaacaaggggaaaacttgatgctttagaggacaagaat 773 ||||| ||||||||||||| ||| |||||| ||||||||| || | ||||| |||||| Sbjct: 748 gagctagaagatgagcttcaggaagcaagggaaaaacttgaggcacttgaggaaaagaat 807 Query: 774 ac 775 || Sbjct: 808 ac 809
>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028E10 Length = 140791 Score = 63.9 bits (32), Expect = 2e-06 Identities = 110/136 (80%) Strand = Plus / Minus Query: 388 tctatcgcatgtatcgcacccttgctgagcggtatgacaatgtaactggagaactgcgga 447 |||| ||||||||||| | ||||| ||||| ||||||||||| ||||| ||| | || | Sbjct: 66978 tctaccgcatgtatcgtgctcttgccgagcgttatgacaatgtgactggggaattacgca 66919 Query: 448 aaaatatcccatcatcactgcaaccacatggctcttttggtgcccctgaatcagattctg 507 | ||||||||||| ||||| || |||| |||||| || | ||||||| ||||||| Sbjct: 66918 agaatatcccatcgtcactccagtcacaaggctctcttagcatatctgaatctgattctg 66859 Query: 508 agacacagtctcctcc 523 ||||||||||| |||| Sbjct: 66858 agacacagtctgctcc 66843 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1394 agaagccaatgcctctctcgaaggcaagctggcatcca 1431 |||||||||||| ||||| |||||||||||| |||||| Sbjct: 65933 agaagccaatgcttctcttgaaggcaagctgacatcca 65896 Score = 44.1 bits (22), Expect = 2.1 Identities = 52/62 (83%) Strand = Plus / Minus Query: 714 gagcttgaagatgagcttcttgaaacaaggggaaaacttgatgctttagaggacaagaat 773 ||||| ||||||||||||| ||| |||||| ||||||||| || | ||||| |||||| Sbjct: 66619 gagctagaagatgagcttcaggaagcaagggaaaaacttgaggcacttgaggaaaagaat 66560 Query: 774 ac 775 || Sbjct: 66559 ac 66558
>dbj|AK111165.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B06, full insert sequence Length = 3209 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1394 agaagccaatgcctctctcgaaggcaagctggcatcca 1431 |||||||||||| ||||| |||||||||||| |||||| Sbjct: 398 agaagccaatgcttctcttgaaggcaagctgacatcca 435
>dbj|AK064373.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-D02, full insert sequence Length = 1429 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1394 agaagccaatgcctctctcgaaggcaagctggcatcca 1431 |||||||||||| ||||| |||||||||||| |||||| Sbjct: 652 agaagccaatgcttctcttgaaggcaagctgacatcca 689
>emb|AL355135.6| Human DNA sequence from clone RP11-643P14 on chromosome X, complete sequence Length = 47655 Score = 48.1 bits (24), Expect = 0.13 Identities = 33/36 (91%) Strand = Plus / Plus Query: 703 aaagaattattgagcttgaagatgagcttcttgaaa 738 ||||||||| ||||||||||||| |||| ||||||| Sbjct: 6176 aaagaattactgagcttgaagataagctacttgaaa 6211
>dbj|AB076182.1| Oncorhynchus keta mRNA for myosin heavy chain, complete cds Length = 5994 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1292 actccaggaccgtattgaggagctggag 1319 |||||||| ||||||||||||||||||| Sbjct: 3387 actccaggcccgtattgaggagctggag 3414
>ref|XM_524044.2| PREDICTED: Pan troglodytes lamin B2 (LMNB2), mRNA Length = 4468 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 1131 gctgccgctgctgctcgaggtgg 1109
>ref|XM_978272.1| PREDICTED: Mus musculus similar to T-cell immunoglobulin and mucin domain containing 2 (LOC669972), mRNA Length = 1848 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 746 aaaacttgatgctttagaggaca 768 ||||||||||||||||||||||| Sbjct: 273 aaaacttgatgctttagaggaca 295
>ref|NM_032737.2| Homo sapiens lamin B2 (LMNB2), mRNA Length = 4653 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 1299 gctgccgctgctgctcgaggtgg 1277
>gb|BT009886.1| Synthetic construct Homo sapiens lamin B2 mRNA, partial cds Length = 1803 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 1212 gctgccgctgctgctcgaggtgg 1190
>gb|BT007441.1| Homo sapiens lamin B1 mRNA, complete cds Length = 1803 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 1212 gctgccgctgctgctcgaggtgg 1190
>emb|CT009518.6| Mouse DNA sequence from clone RP23-118M14 on chromosome 13, complete sequence Length = 221250 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 663 aaagaggaaaatggcaacagcat 685 ||||||||||||||||||||||| Sbjct: 39383 aaagaggaaaatggcaacagcat 39405
>gb|AC011522.8| Homo sapiens chromosome 19 clone LLNLF-208A9, complete sequence Length = 41716 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 25284 gctgccgctgctgctcgaggtgg 25306
>gb|AC158536.2| Mus musculus BAC clone RP23-29L19 from chromosome 13, complete sequence Length = 199663 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 663 aaagaggaaaatggcaacagcat 685 ||||||||||||||||||||||| Sbjct: 166392 aaagaggaaaatggcaacagcat 166414
>emb|AL669892.11| Mouse DNA sequence from clone RP23-31K14 on chromosome 11 Contains a hepatitis A virus cellular receptor (Havcr) pseudogene, the Timd2 gene for T-cell immunoglobulin and mucin domain containing 2, a ribosomal protein L7 (Rpl7) pseudogene, the Havcr1 gene for hepatitis A virus cellular receptor 1 and a CpG island, complete sequence Length = 158979 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 746 aaaacttgatgctttagaggaca 768 ||||||||||||||||||||||| Sbjct: 11311 aaaacttgatgctttagaggaca 11289
>emb|CR621930.1| full-length cDNA clone CS0DA001YD19 of Neuroblastoma of Homo sapiens (human) Length = 1832 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 1288 gctgccgctgctgctcgaggtgg 1266
>emb|CR599500.1| full-length cDNA clone CS0DD008YP14 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1927 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 1289 gctgccgctgctgctcgaggtgg 1267
>emb|CR596055.1| full-length cDNA clone CS0DC029YK18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1827 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 1289 gctgccgctgctgctcgaggtgg 1267
>emb|CR594022.1| full-length cDNA clone CS0DC008YM17 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1815 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 1257 gctgccgctgctgctcgaggtgg 1235
>gb|AF242431.1|AF242431S1 Mus musculus neuronal apoptosis inhibitory protein 6 (Naip6) gene, complete cds; and Naip3 gene, exons 2-9 and 11-16 Length = 117791 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 663 aaagaggaaaatggcaacagcat 685 ||||||||||||||||||||||| Sbjct: 105926 aaagaggaaaatggcaacagcat 105904
>gb|AY892649.1| Synthetic construct Homo sapiens clone FLH015758.01L lamin B2 (LMNB2) mRNA, partial cds Length = 1803 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 1212 gctgccgctgctgctcgaggtgg 1190
>gb|AY890165.1| Synthetic construct Homo sapiens clone FLH015762.01X lamin B2 (LMNB2) mRNA, complete cds Length = 1803 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 1212 gctgccgctgctgctcgaggtgg 1190
>gb|BC006551.2| Homo sapiens lamin B2, mRNA (cDNA clone MGC:2538 IMAGE:2961134), complete cds Length = 1943 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 1272 gctgccgctgctgctcgaggtgg 1250
>gb|M94362.1|HUMLAMBBA Human lamin B2 (LAMB2) mRNA, partial cds Length = 4270 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gctgccgctgctgctcgaggtgg 96 ||||||||||||||||||||||| Sbjct: 960 gctgccgctgctgctcgaggtgg 938
>gb|CP000485.1| Bacillus thuringiensis str. Al Hakam, complete genome Length = 5257091 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 911 agcagctaaacagtttgaaattgaattggcgcat 944 |||||| |||||||||||||||| | |||||||| Sbjct: 67696 agcagcaaaacagtttgaaattgtagtggcgcat 67729
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1853 gctgcgcgagatgctgcagcag 1874 |||||||||||||||||||||| Sbjct: 680359 gctgcgcgagatgctgcagcag 680380
>gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein BM5A (VRN-H1) mRNA, complete cds Length = 1151 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 643 aggaacttgtggagaagcagaa 664
>gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triumph MADS-box protein BM5A (VRN-H1) mRNA, complete cds Length = 1105 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 598 aggaacttgtggagaagcagaa 619
>gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai MADS-box protein BM5A (VRN-H1) mRNA, complete cds Length = 1113 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 606 aggaacttgtggagaagcagaa 627
>gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS-box protein BM5A (VRN-H1) mRNA, complete cds Length = 1113 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 606 aggaacttgtggagaagcagaa 627
>gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS-box protein BM5A (VRN-H1) mRNA, complete cds Length = 1113 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 606 aggaacttgtggagaagcagaa 627
>gb|AY785832.1| Hordeum vulgare subsp. spontaneum cultivar Caesarea 26-24 (OSU11) MADS-box protein BM5A (VRN-H1) mRNA, complete cds Length = 1117 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 610 aggaacttgtggagaagcagaa 631
>gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Tremois MADS-box protein BM5A (VRN-H1) mRNA, complete cds Length = 1113 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 606 aggaacttgtggagaagcagaa 627
>gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box protein BM5A (VRN-H1) mRNA, complete cds Length = 1113 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 606 aggaacttgtggagaagcagaa 627
>gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein BM5A (VRN-H1) mRNA, complete cds Length = 1117 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 610 aggaacttgtggagaagcagaa 631
>gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo MADS-box protein BM5A (VRN-H1) mRNA, complete cds Length = 1113 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 606 aggaacttgtggagaagcagaa 627
>gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 MADS-box protein BM5A (VRN-H1) mRNA, complete cds Length = 1113 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 606 aggaacttgtggagaagcagaa 627
>gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein BM5A (VRN-H1) mRNA, complete cds Length = 1117 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 610 aggaacttgtggagaagcagaa 631
>gb|AC161194.14| Mus musculus chromosome 15, clone RP23-345C13, complete sequence Length = 193998 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1180 aagaggcaataaagaatacaaaagca 1205 |||||||||||||||||||| ||||| Sbjct: 158788 aagaggcaataaagaatacacaagca 158763
>gb|AY758238.1| Hordeum vulgare cultivar Dairokkaku BM5a mRNA, complete cds Length = 1153 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 639 aggaacttgtggagaagcagaa 660
>gb|AY758237.1| Hordeum vulgare cultivar Golden Promise BM5a mRNA, complete cds Length = 1157 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 643 aggaacttgtggagaagcagaa 664
>gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triumph BM5a mRNA, complete cds Length = 1145 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 631 aggaacttgtggagaagcagaa 652
>gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri BM5a mRNA, complete cds Length = 1153 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 639 aggaacttgtggagaagcagaa 660
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 911 agcagctaaacagtttgaaattgaattggcgcat 944 |||||| |||||||||||||||| | |||||||| Sbjct: 67700 agcagcaaaacagtttgaaattgtagtggcgcat 67733
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 911 agcagctaaacagtttgaaattgaattggcgcat 944 |||||| |||||||||||||||| | |||||||| Sbjct: 67685 agcagcaaaacagtttgaaattgtagtggcgcat 67718
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 911 agcagctaaacagtttgaaattgaattggcgcat 944 |||||| |||||||||||||||| | |||||||| Sbjct: 67686 agcagcaaaacagtttgaaattgtagtggcgcat 67719
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 911 agcagctaaacagtttgaaattgaattggcgcat 944 |||||| |||||||||||||||| | |||||||| Sbjct: 67692 agcagcaaaacagtttgaaattgtagtggcgcat 67725
>gb|AC094241.9| Rattus norvegicus 1 BAC CH230-3C7 (Children's Hospital Oakland Research Institute) complete sequence Length = 215638 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2047 cttgaaaagaaagaaaagcaat 2068 |||||||||||||||||||||| Sbjct: 97008 cttgaaaagaaagaaaagcaat 96987
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1256 agcacagctagaaatatcctta 1277 |||||||||||||||||||||| Sbjct: 1818746 agcacagctagaaatatcctta 1818725
>gb|AE008702.1| Salmonella typhimurium LT2, section 10 of 220 of the complete genome Length = 21072 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1708 tactggagctgcgcgctcaggt 1729 |||||||||||||||||||||| Sbjct: 18159 tactggagctgcgcgctcaggt 18138
>gb|AC115622.2| Homo sapiens BAC clone RP11-404I7 from 4, complete sequence Length = 164545 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 703 aaagaattattgagcttgaaga 724 |||||||||||||||||||||| Sbjct: 46870 aaagaattattgagcttgaaga 46891
>gb|AC104740.2| Homo sapiens chromosome 3 clone RP11-46D21, complete sequence Length = 156801 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 703 aaagaattattgagcttgaaga 724 |||||||||||||||||||||| Sbjct: 42264 aaagaattattgagcttgaaga 42285
>emb|AL590325.10| Human DNA sequence from clone RP11-85L21 on chromosome Xq25-26.3 Contains a nucleolin (NCL) pseudogene, a zinc finger family pseudogene, three novel genes, the 3' end of a novel gene and a CpG island, complete sequence Length = 84879 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 703 aaagaattattgagcttgaaga 724 |||||||||||||||||||||| Sbjct: 18079 aaagaattattgagcttgaaga 18058
>emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box protein 5 (m5 gene) Length = 1196 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1741 aggaacttgtggagaagcagaa 1762 |||||||||||||||||||||| Sbjct: 649 aggaacttgtggagaagcagaa 670
>gb|AC084063.5| Homo sapiens chromosome 16 clone RP11-255J12, complete sequence Length = 46053 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 704 aagaattattgagcttgaagat 725 |||||||||||||||||||||| Sbjct: 13553 aagaattattgagcttgaagat 13574
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1708 tactggagctgcgcgctcaggt 1729 |||||||||||||||||||||| Sbjct: 218290 tactggagctgcgcgctcaggt 218269
>ref|XM_314106.2| Anopheles gambiae str. PEST ENSANGP00000003734 (ENSANGG00000002992), partial mRNA Length = 1047 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 gctgccgctgctgctcgaggtg 95 |||||||||||||||||||||| Sbjct: 633 gctgccgctgctgctcgaggtg 654
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 911 agcagctaaacagtttgaaattgaattggcgcat 944 |||||| |||||||||||||||| | |||||||| Sbjct: 67685 agcagcaaaacagtttgaaattgtagtggcgcat 67718
>emb|CR405710.10| Zebrafish DNA sequence from clone DKEYP-28D2 in linkage group 24, complete sequence Length = 185586 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 917 taaacagtttgaaattgaatt 937 ||||||||||||||||||||| Sbjct: 181371 taaacagtttgaaattgaatt 181351
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gctgctgctcgaggtggtggt 100 ||||||||||||||||||||| Sbjct: 14116519 gctgctgctcgaggtggtggt 14116539
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1833 taccgcagcaggtaccaggagctgc 1857 ||||||||| ||||||||||||||| Sbjct: 3826566 taccgcagctggtaccaggagctgc 3826590
>gb|AC141398.4| Rattus norvegicus BAC CH230-12M22 () complete sequence Length = 251898 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 tacaagagatggagatgcaag 282 ||||||||||||||||||||| Sbjct: 232426 tacaagagatggagatgcaag 232446 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 tacaagagatggagatgcaag 282 ||||||||||||||||||||| Sbjct: 247045 tacaagagatggagatgcaag 247065
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 973 aggagcttgtagaactttcag 993 ||||||||||||||||||||| Sbjct: 143622 aggagcttgtagaactttcag 143642
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1854 ctgcgcgagatgctgcagcag 1874 ||||||||||||||||||||| Sbjct: 1722122 ctgcgcgagatgctgcagcag 1722142
>ref|XM_864132.1| PREDICTED: Bos taurus similar to CG7523-PA (LOC613396), partial mRNA Length = 2073 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1740 gaggaacttgtggagaagcag 1760 ||||||||||||||||||||| Sbjct: 255 gaggaacttgtggagaagcag 275
>gb|AC115818.9| Mus musculus chromosome 1, clone RP23-433A12, complete sequence Length = 186895 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1048 gagttatcacaaattctgaag 1068 ||||||||||||||||||||| Sbjct: 166712 gagttatcacaaattctgaag 166692
>gb|AC121297.20| Mus musculus chromosome 1, clone RP23-326H11, complete sequence Length = 207496 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1048 gagttatcacaaattctgaag 1068 ||||||||||||||||||||| Sbjct: 177002 gagttatcacaaattctgaag 177022
>gb|AC118710.7| Mus musculus chromosome 15, clone RP24-121C9, complete sequence Length = 175437 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 746 aaaacttgatgctttagagga 766 ||||||||||||||||||||| Sbjct: 172270 aaaacttgatgctttagagga 172250
>gb|AC009394.5| Drosophila melanogaster clone BACR03J17, complete sequence Length = 199043 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gctgctgctcgaggtggtggt 100 ||||||||||||||||||||| Sbjct: 109739 gctgctgctcgaggtggtggt 109759
>ref|NM_169802.1| Drosophila melanogaster lethal (3) 05822 CG7129-RB, transcript variant B (l(3)05822), mRNA Length = 2643 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gctgctgctcgaggtggtggt 100 ||||||||||||||||||||| Sbjct: 820 gctgctgctcgaggtggtggt 800
>ref|NM_143794.2| Drosophila melanogaster lethal (3) 05822 CG7129-RA, transcript variant A (l(3)05822), mRNA Length = 3291 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gctgctgctcgaggtggtggt 100 ||||||||||||||||||||| Sbjct: 1468 gctgctgctcgaggtggtggt 1448
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1852 agctgcgcgagatgctgcagc 1872 ||||||||||||||||||||| Sbjct: 1574338 agctgcgcgagatgctgcagc 1574358
>gb|AC132878.13| Mus musculus chromosome 15, clone RP24-223D21, complete sequence Length = 145479 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 746 aaaacttgatgctttagagga 766 ||||||||||||||||||||| Sbjct: 82061 aaaacttgatgctttagagga 82041 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 746 aaaacttgatgctttagagga 766 ||||||||||||||||||||| Sbjct: 110887 aaaacttgatgctttagagga 110907
>gb|AE011921.1| Xanthomonas axonopodis pv. citri str. 306, section 299 of 469 of the complete genome Length = 10062 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1852 agctgcgcgagatgctgcagc 1872 ||||||||||||||||||||| Sbjct: 9113 agctgcgcgagatgctgcagc 9093
>emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14 on chromosome 3, complete sequence Length = 96467 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 gaaaaatatcccatcatcact 466 ||||||||||||||||||||| Sbjct: 11754 gaaaaatatcccatcatcact 11734
>emb|AL392164.10| Human DNA sequence from clone RP11-269L6 on chromosome X, complete sequence Length = 15885 Score = 42.1 bits (21), Expect = 8.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 702 caaagaattattgagcttgaagatgagct 730 |||||||||| ||||||||||||| |||| Sbjct: 6143 caaagaattagtgagcttgaagataagct 6171
>gb|AY069664.1| Drosophila melanogaster LD44138 full length cDNA Length = 3199 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gctgctgctcgaggtggtggt 100 ||||||||||||||||||||| Sbjct: 1367 gctgctgctcgaggtggtggt 1347
>emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chromosome 9q22.1-22.33 Contains the PTCH gene for patched homolog, a novel gene, the gene for a novel protein similar to a metallothionein protein (MT1) and three CpG islands, complete sequence Length = 189643 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2051 aaaagaaagaaaagcaatcat 2071 ||||||||||||||||||||| Sbjct: 146745 aaaagaaagaaaagcaatcat 146765
>emb|AL133214.12| Human DNA sequence from clone RP11-163F8 on chromosome 9p21.2-23 Contains the 3' end of a novel gene (FLJ20276), the 5' end of the SH3GL2 gene for SH3-domain GRB2-like 2 (CNSA2, SH3P4, EEN-B1, SH3D2A), a poly(A)-binding protein pseudogene and a CpG Island, complete sequence Length = 154621 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2088 tctttgtcacttctgttacaa 2108 ||||||||||||||||||||| Sbjct: 152782 tctttgtcacttctgttacaa 152762
>gb|AC123975.16| Medicago truncatula clone mth2-12m13, complete sequence Length = 121884 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 917 taaacagtttgaaattgaatt 937 ||||||||||||||||||||| Sbjct: 52186 taaacagtttgaaattgaatt 52166
>gb|U75363.1|RPU75363 Rhodopseudomonas palustris cyclohex-1-ene-1-carboxyl-CoA hydratase (badk), cyclohex-1-ene-1-carboxylate CoA ligase (aliA), cyclohexanecarboxyl-CoA dehydrogenase (badJ), 2-ketocyclohexanecarboxyl-CoA hydrolase (badI), putative 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase (badH), putative regulatory protein (badR), putative NADPH:quinone oxidoreductase (badC), and benzoyl-CoA reductase subunits (badD), (badE), (badF) and (badG) genes, complete cds Length = 12058 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1853 gctgcgcgagatgctgcagca 1873 ||||||||||||||||||||| Sbjct: 841 gctgcgcgagatgctgcagca 821
>emb|BX649525.14| Zebrafish DNA sequence from clone CH211-85E10 in linkage group 22, complete sequence Length = 180584 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1191 aagaatacaaaagcagaactt 1211 ||||||||||||||||||||| Sbjct: 28833 aagaatacaaaagcagaactt 28813
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1853 gctgcgcgagatgctgcagca 1873 ||||||||||||||||||||| Sbjct: 20499 gctgcgcgagatgctgcagca 20479
>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3, complete sequence Length = 241961 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1543 aactgatatcatcagagaaag 1563 ||||||||||||||||||||| Sbjct: 143789 aactgatatcatcagagaaag 143769
>gb|AC006435.7|AC006435 Homo sapiens chromosome 17, clone RP5-59D14, complete sequence Length = 139267 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1882 ggagaccacagatgctgatgg 1902 ||||||||||||||||||||| Sbjct: 30182 ggagaccacagatgctgatgg 30162
>gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosome 13, complete sequence Length = 146998 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2052 aaagaaagaaaagcaatcatg 2072 ||||||||||||||||||||| Sbjct: 69909 aaagaaagaaaagcaatcatg 69889
>emb|BX510907.15| Zebrafish DNA sequence from clone CH211-234B6 in linkage group 5, complete sequence Length = 154591 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 917 taaacagtttgaaattgaatt 937 ||||||||||||||||||||| Sbjct: 67288 taaacagtttgaaattgaatt 67268
>emb|AL928632.13| Mouse DNA sequence from clone RP23-303M15 on chromosome 2, complete sequence Length = 217309 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 746 aaaacttgatgctttagagga 766 ||||||||||||||||||||| Sbjct: 158948 aaaacttgatgctttagagga 158928
>emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in linkage group 24, complete sequence Length = 213917 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 917 taaacagtttgaaattgaatt 937 ||||||||||||||||||||| Sbjct: 165009 taaacagtttgaaattgaatt 164989
>emb|BX663499.5| Zebrafish DNA sequence from clone CH211-160I2 in linkage group 2, complete sequence Length = 195369 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 518 tcctccatctacagagcaaaa 538 ||||||||||||||||||||| Sbjct: 139953 tcctccatctacagagcaaaa 139933
>emb|Z64331.1|HS9G2R H.sapiens CpG island DNA genomic Mse1 fragment, clone 9g2, reverse read cpg9g2.rt1a Length = 322 Score = 42.1 bits (21), Expect = 8.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 2094 tcacttctgttacaatctcatcatatattcaag 2126 ||||| |||||||| ||||||||||| |||||| Sbjct: 185 tcactactgttacagtctcatcatattttcaag 217
>emb|Z64330.1|HS9G2F H.sapiens CpG island DNA genomic Mse1 fragment, clone 9g2, forward read cpg9g2.ft1a Length = 276 Score = 42.1 bits (21), Expect = 8.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 2094 tcacttctgttacaatctcatcatatattcaag 2126 ||||| |||||||| ||||||||||| |||||| Sbjct: 171 tcactactgttacagtctcatcatattttcaag 139
>gb|AC124636.23| Mus musculus chromosome 16, clone RP23-454J20, complete sequence Length = 187247 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 746 aaaacttgatgctttagagga 766 ||||||||||||||||||||| Sbjct: 160097 aaaacttgatgctttagagga 160117
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1852 agctgcgcgagatgctgcagc 1872 ||||||||||||||||||||| Sbjct: 1589635 agctgcgcgagatgctgcagc 1589655
>gb|AC141473.4| Mus musculus BAC clone RP24-187J17 from 3, complete sequence Length = 178156 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 717 cttgaagatgagcttcttgaa 737 ||||||||||||||||||||| Sbjct: 64839 cttgaagatgagcttcttgaa 64819 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 439,632,868 Number of extensions: 26169675 Number of successful extensions: 151311 Number of sequences better than 10.0: 108 Number of HSP's gapped: 151304 Number of HSP's successfully gapped: 189 Length of query: 2168 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2145 Effective length of database: 18,503,978,556 Effective search space: 39691034002620 Effective search space used: 39691034002620 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
