ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf38g14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103620: | 38 | 0.002 | 2 | AK073294:Os02g0274100 | 38 | 0.002 | 3 | AF442962:Os02g0274100 | 38 | 0.002 | 4 | AK099645:Os01g0164600 | 30 | 2.5 | 5 | Os07g0591100:Os07g0591100 | 29 | 4.3 | 6 | Os07g0578800:Os07g0578800 | 28 | 9.6 | 7 | AK060135:Os12g0190200 | 28 | 9.6 |
|---|
>AK103620: | Length = 726 Score = 38.1 bits (87), Expect(2) = 0.002 Identities = 18/22 (81%), Positives = 18/22 (81%) Frame = +3 Query: 438 ICNPPVNALHPIII*GLN*KNA 503 ICNPPVNALHPIII GL K A Sbjct: 21 ICNPPVNALHPIIIQGLKEKYA 42 Score = 20.8 bits (42), Expect(2) = 0.002 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +1 Query: 508 AFSRDDIIAAVLTDVG 555 A RDD+ A VLT G Sbjct: 44 AMDRDDVKAIVLTGAG 59
>AK073294:Os02g0274100 | Length = 726 Score = 38.1 bits (87), Expect(2) = 0.002 Identities = 18/22 (81%), Positives = 18/22 (81%) Frame = +3 Query: 438 ICNPPVNALHPIII*GLN*KNA 503 ICNPPVNALHPIII GL K A Sbjct: 21 ICNPPVNALHPIIIQGLKEKYA 42 Score = 20.8 bits (42), Expect(2) = 0.002 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +1 Query: 508 AFSRDDIIAAVLTDVG 555 A RDD+ A VLT G Sbjct: 44 AMDRDDVKAIVLTGAG 59
>AF442962:Os02g0274100 | Length = 726 Score = 38.1 bits (87), Expect(2) = 0.002 Identities = 18/22 (81%), Positives = 18/22 (81%) Frame = +3 Query: 438 ICNPPVNALHPIII*GLN*KNA 503 ICNPPVNALHPIII GL K A Sbjct: 21 ICNPPVNALHPIIIQGLKEKYA 42 Score = 20.8 bits (42), Expect(2) = 0.002 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +1 Query: 508 AFSRDDIIAAVLTDVG 555 A RDD+ A VLT G Sbjct: 44 AMDRDDVKAIVLTGAG 59
>AK099645:Os01g0164600 | Length = 331 Score = 29.6 bits (65), Expect = 2.5 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -2 Query: 581 LMLTKKHETPTSVSTAAMMSSRLKAEGVLLVEPLDDDGVQSI 456 L+L K H TSV +A ++ + L+ G+L + + D G++ I Sbjct: 117 LLLMKAHAATTSVGSATVIIAMLEKTGILKIASVGDCGLKVI 158
>Os07g0591100:Os07g0591100 | Length = 518 Score = 28.9 bits (63), Expect = 4.3 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -2 Query: 350 IPPSEARAPPSGRSCEVG*EMEVRWGWRIRSKKGREATGDAPP 222 IPP++ R+ P G SCE+ G R R A APP Sbjct: 454 IPPADIRSGPVGESCELPPPAAAPHGERARHPARVAAVDRAPP 496
>Os07g0578800:Os07g0578800 | Length = 1011 Score = 27.7 bits (60), Expect = 9.6 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -1 Query: 303 GGLRDGGEVGVADPVEEGQRGHRRRP 226 G + GE G+ D +RGHRR P Sbjct: 118 GAVTVAGEAGLLDGARHAERGHRRGP 143
>AK060135:Os12g0190200 | Length = 273 Score = 27.7 bits (60), Expect = 9.6 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -1 Query: 309 VRGGLRDGGEVGVADPVEEGQRGHRRRPARTLAPNGSGW 193 V+ GL G G++DP E+G R + RRP +G GW Sbjct: 88 VKQGLLAGRIPGLSDPDEKGWRTY-RRPDDKSGGHGVGW 125 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,680,834 Number of extensions: 267288 Number of successful extensions: 1019 Number of sequences better than 10.0: 7 Number of HSP's gapped: 1019 Number of HSP's successfully gapped: 10 Length of query: 266 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 167 Effective length of database: 11,435,796 Effective search space: 1909777932 Effective search space used: 1909777932 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
