ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf41n23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os05g0188700:Os05g0188700 | 32 | 0.55 | 2 | AK105848:Os02g0159700 | 31 | 0.72 | 3 | AK107533:Os08g0381000 | 30 | 2.1 | 4 | AK060014:Os07g0530700 | 29 | 2.7 | 5 | Os04g0434600:Os04g0434600 | 29 | 3.6 | 6 | Os03g0819500:Os03g0819500 | 29 | 3.6 | 7 | Os03g0215900:Os03g0215900 | 29 | 3.6 | 8 | AK110051: | 28 | 4.7 | 9 | AY341856:Os01g0626400 | 28 | 6.1 | 10 | AK108745:Os01g0626400 | 28 | 6.1 | 11 | AK107399:Os08g0177000 | 28 | 6.1 | 12 | AK069639:Os08g0230200 | 28 | 6.1 | 13 | AK060252:Os08g0230200 | 28 | 6.1 | 14 | Os10g0569800:Os10g0569800 | 28 | 8.0 | 15 | Os03g0757700:Os03g0757700 | 28 | 8.0 | 16 | AK110410: | 28 | 8.0 | 17 | AK110612:Os05g0277200 | 28 | 8.0 | 18 | AK108975:Os02g0586000 | 28 | 8.0 | 19 | AK099152:Os05g0133100 | 28 | 8.0 | 20 | AK068407:Os05g0133100 | 28 | 8.0 | 21 | AK067042:Os04g0507000 | 28 | 8.0 |
|---|
>Os05g0188700:Os05g0188700 | Length = 440 Score = 31.6 bits (70), Expect = 0.55 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 12/56 (21%) Frame = +2 Query: 2 GRRHEVSTSRPEEAAVGRAQPGRG------------RRRHHVSPRPGIPHRHMPKQ 133 GRRH +PE A G P R R ++PRP +PHR P+Q Sbjct: 119 GRRHRPQPRQPEGDAPGGGVPPRPPHVPPPQQQPPRRPAPRLAPRPPVPHRARPQQ 174
>AK105848:Os02g0159700 | Length = 175 Score = 31.2 bits (69), Expect = 0.72 Identities = 20/50 (40%), Positives = 22/50 (44%) Frame = +2 Query: 8 RHEVSTSRPEEAAVGRAQPGRGRRRHHVSPRPGIPHRHMPKQATRVVAGR 157 R V EAAVG A+ R RRR V PR P +A V GR Sbjct: 50 RPRVLREEAAEAAVGEAEARRQRRRRAVFPRGRAPRAARGAEADAVGVGR 99
>AK107533:Os08g0381000 | Length = 454 Score = 29.6 bits (65), Expect = 2.1 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +3 Query: 207 PSPPFACVHHRPLYQPHRRL 266 PSPP A + HRPL++PHR L Sbjct: 106 PSPPSA-LQHRPLHRPHRLL 124
>AK060014:Os07g0530700 | Length = 119 Score = 29.3 bits (64), Expect = 2.7 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Frame = +2 Query: 29 RPEEAAVGRAQPGRGRRRHHVSPRPGIPH---RHMPKQ--ATRVVAG 154 R E AAV + GRRRH PRP PH RH ++ A R AG Sbjct: 5 RQEAAAVAALRACGGRRRHG-RPRPARPHAGGRHAGREVPAARAAAG 50
>Os04g0434600:Os04g0434600 | Length = 1193 Score = 28.9 bits (63), Expect = 3.6 Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 12/87 (13%) Frame = +1 Query: 91 VAAARHPTPPHAEAGHK---SSGRXXXXXXXXXTTHLSDLAGLLPPSPVCIIG------- 240 VAAA HP P +G + S TT S AG P +P Sbjct: 29 VAAAAHPPPARTSSGGRPSTPSSSSSAAGGGRPTTPSSSSAGGRPTTPSAAFARSTTPSS 88 Query: 241 --PSTSRIAASSAQPRRPPTILLHVAS 315 P+T A+S A R PP + A+ Sbjct: 89 GRPTTPSSASSRAAGRAPPVAAVDAAN 115
>Os03g0819500:Os03g0819500 | Length = 365 Score = 28.9 bits (63), Expect = 3.6 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = +2 Query: 2 GRRHEVSTSRPEEAAVGRAQPGRGRRRHHVSPRPGIPHRHMPKQATRVVAGRRR 163 G + R GR + GR RRR H P+ P R ++ V AG+RR Sbjct: 243 GGQARCGRGRERRRGAGRGERGR-RRRRHPWPQFSRPRRQRRRRRECVSAGQRR 295
>Os03g0215900:Os03g0215900 | Length = 687 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -3 Query: 147 TTLVACFGMWRCGMPGRGDTWWRRRPRPGCA 55 +T+++C CGMPG+ W+ + P GC+ Sbjct: 199 STVISCARA--CGMPGKAVEWFEKMPDFGCS 227
>AK110051: | Length = 1079 Score = 28.5 bits (62), Expect = 4.7 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Frame = -3 Query: 147 TTLVACFGMWRCGMPGRGDTW---WRRRPRPGCARPTAASSGRDV 22 +T + FG R G+P G+ + W R R G A+P AA D+ Sbjct: 273 STFIRVFG--RAGVPEEGEEFLRQWTRAQRAGAAQPDAAMLQADI 315
>AY341856:Os01g0626400 | Length = 379 Score = 28.1 bits (61), Expect = 6.1 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 7/42 (16%) Frame = +3 Query: 153 AAAATFPSLHYSSVGSSRPSPPFAC-------VHHRPLYQPH 257 AAAA PS+++ V +S P PP H PL Q H Sbjct: 318 AAAAANPSMYFPGVAASAPPPPAVAGGGAMPPNDHPPLQQHH 359
>AK108745:Os01g0626400 | Length = 379 Score = 28.1 bits (61), Expect = 6.1 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 7/42 (16%) Frame = +3 Query: 153 AAAATFPSLHYSSVGSSRPSPPFAC-------VHHRPLYQPH 257 AAAA PS+++ V +S P PP H PL Q H Sbjct: 318 AAAAANPSMYFPGVAASAPPPPAVAGGGAMPPNDHPPLQQHH 359
>AK107399:Os08g0177000 | Length = 196 Score = 28.1 bits (61), Expect = 6.1 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = +2 Query: 32 PEEAAVGRAQPGRGRRRHHVSPRPGIPHRHMPKQATRVVAGRRRH 166 PEE +G P G HV+PR R P VV RR H Sbjct: 117 PEEEPLGAGAPHAGHHEEHVAPRRLTLRREQPV----VVRQRRLH 157
>AK069639:Os08g0230200 | Length = 482 Score = 28.1 bits (61), Expect = 6.1 Identities = 18/59 (30%), Positives = 24/59 (40%) Frame = +1 Query: 109 PTPPHAEAGHKSSGRXXXXXXXXXTTHLSDLAGLLPPSPVCIIGPSTSRIAASSAQPRR 285 P H E G KSSG + L +LP + + GP +S SS PR+ Sbjct: 117 PLNKHGEPGKKSSGPQSGGVTPMARQNSGPLPPVLPTTGLITSGPISSGPLNSSGAPRK 175
>AK060252:Os08g0230200 | Length = 482 Score = 28.1 bits (61), Expect = 6.1 Identities = 18/59 (30%), Positives = 24/59 (40%) Frame = +1 Query: 109 PTPPHAEAGHKSSGRXXXXXXXXXTTHLSDLAGLLPPSPVCIIGPSTSRIAASSAQPRR 285 P H E G KSSG + L +LP + + GP +S SS PR+ Sbjct: 117 PLNKHGEPGKKSSGPQSGGVTPMARQNSGPLPPVLPTTGLITSGPISSGPLNSSGAPRK 175
>Os10g0569800:Os10g0569800 | Length = 548 Score = 27.7 bits (60), Expect = 8.0 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = +2 Query: 8 RHEVSTSRPEEAAVG-RAQPGRGRRR-HHVSPRPGIPHR 118 R + RP VG R PGR R HH +P PG P R Sbjct: 74 RRRATARRPPGPDVGVRHHPGRRRLAGHHFAPPPGHPSR 112
>Os03g0757700:Os03g0757700 | Length = 441 Score = 27.7 bits (60), Expect = 8.0 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%) Frame = +3 Query: 3 GGATRSRRLVPRKPQ*DE---HNLDEVAVATTCRRGQASHTATC---RSRPQE*WQAAAA 164 GGAT+S R+PQ ++ A RR + T C RS P + Sbjct: 229 GGATKSGACGGRRPQPPTAAWRSMSSKAPRALHRRRPSRSTLPCLSSRSLP-----SPLP 283 Query: 165 TFPSLHYSSVGSSRPSPP 218 T PS H ++ G + P PP Sbjct: 284 TLPSTHATTPGHAPPHPP 301
>AK110410: | Length = 850 Score = 27.7 bits (60), Expect = 8.0 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +2 Query: 5 RRHEVSTSRPEEAAVGRAQPGRGRRRHHVSPRPGIPHRHMPKQATR 142 R E +SR +E A+P RRR H+ P RH ++A R Sbjct: 585 RDREHRSSRRKEKDRESARPQNDRRRSHMDDDPERRRRHEERRAAR 630
>AK110612:Os05g0277200 | Length = 284 Score = 27.7 bits (60), Expect = 8.0 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -2 Query: 163 AAAACHYSCGLLRHVAVWDAWPRRHVVATATSSRLCSS 50 +A + CG R + DAWP HV RLCSS Sbjct: 10 SAGSIPRGCGGDRCASGRDAWPLHHVRHDGVFCRLCSS 47
>AK108975:Os02g0586000 | Length = 94 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/30 (43%), Positives = 13/30 (43%) Frame = -3 Query: 120 WRCGMPGRGDTWWRRRPRPGCARPTAASSG 31 W G PGR D W R RP RP G Sbjct: 45 WNGGYPGRPDRPWDRPDRPWDHRPHPGPGG 74
>AK099152:Os05g0133100 | Length = 212 Score = 27.7 bits (60), Expect = 8.0 Identities = 22/52 (42%), Positives = 25/52 (48%) Frame = -2 Query: 160 AAACHYSCGLLRHVAVWDAWPRRHVVATATSSRLCSSYCGFLGTRRRDLVAP 5 AAA SCG+LRH A PR T T+SRL L +R R L P Sbjct: 7 AAAAAASCGVLRHHHP-PASPRPPPTTTTTTSRL------LLASRSRGLQRP 51
>AK068407:Os05g0133100 | Length = 212 Score = 27.7 bits (60), Expect = 8.0 Identities = 22/52 (42%), Positives = 25/52 (48%) Frame = -2 Query: 160 AAACHYSCGLLRHVAVWDAWPRRHVVATATSSRLCSSYCGFLGTRRRDLVAP 5 AAA SCG+LRH A PR T T+SRL L +R R L P Sbjct: 7 AAAAAASCGVLRHHHP-PASPRPPPTTTTTTSRL------LLASRSRGLQRP 51
>AK067042:Os04g0507000 | Length = 1132 Score = 27.7 bits (60), Expect = 8.0 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = -3 Query: 150 ATTLVACFGMWRCGMPGRGDTWWRRRPRPGCARPTAASSGRDVETSWRRP 1 A++LVA W +P D++ RRR RP C+ A R SW +P Sbjct: 8 ASSLVAATPRW---LPVAADSFLRRRHRPRCSPLPALLFNR---RSWSKP 51 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,829,133 Number of extensions: 365566 Number of successful extensions: 1840 Number of sequences better than 10.0: 21 Number of HSP's gapped: 1831 Number of HSP's successfully gapped: 21 Length of query: 235 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 138 Effective length of database: 11,515,878 Effective search space: 1589191164 Effective search space used: 1589191164 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
