ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf41n23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX640469.6| Zebrafish DNA sequence from clone DKEY-104M9 in linkage group 19, complete sequence Length = 83435 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Plus Query: 474 ttttcagttatgacatgctttt 495 |||||||||||||||||||||| Sbjct: 23325 ttttcagttatgacatgctttt 23346
>gb|AC098704.2| Danio rerio clone 55A1, complete sequence Length = 85386 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Plus Query: 474 ttttcagttatgacatgctttt 495 |||||||||||||||||||||| Sbjct: 76403 ttttcagttatgacatgctttt 76424
>dbj|AK241985.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075097P21, full insert sequence Length = 929 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 gccgccgccgccaccttcccctccc 177 |||||||||||| |||||||||||| Sbjct: 21 gccgccgccgcccccttcccctccc 45
>emb|CT954220.6| Mouse DNA sequence from clone RP23-333G10 on chromosome 13, complete sequence Length = 86424 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 aggtgaggatgaccttgagtt 459 ||||||||||||||||||||| Sbjct: 50997 aggtgaggatgaccttgagtt 51017
>gb|AC102039.8| Mus musculus chromosome 5, clone RP23-262L7, complete sequence Length = 168142 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cttcccctccctccactactc 187 ||||||||||||||||||||| Sbjct: 3681 cttcccctccctccactactc 3661
>gb|DQ215743.1| Taeniopygia guttata clone 0065P0005A08 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 6-like mRNA, complete sequence Length = 490 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gccgccgccgccaccttcccc 173 ||||||||||||||||||||| Sbjct: 31 gccgccgccgccaccttcccc 11
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 gccgccgccgccaccttcccctccc 177 |||||||||||| |||||||||||| Sbjct: 277389 gccgccgccgcctccttcccctccc 277413
>gb|AC131999.9| Mus musculus chromosome 15, clone RP24-139E21, complete sequence Length = 214392 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 518 tacaaaaaattgatgctctgt 538 ||||||||||||||||||||| Sbjct: 51688 tacaaaaaattgatgctctgt 51708
>gb|DQ402426.1| Leishmania donovani amino acid permease 5 gene, complete cds Length = 2412 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 tggacgaggtcgccgtcgcca 84 ||||||||||||||||||||| Sbjct: 68 tggacgaggtcgccgtcgcca 48
>gb|BC034498.1| Homo sapiens WD repeat domain 26, mRNA (cDNA clone IMAGE:4831010), partial cds Length = 2886 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 gccgccgccgccaccttcccctccc 177 |||||||||||||||| |||||||| Sbjct: 28 gccgccgccgccacctccccctccc 4
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 gccgccgccgccaccttcccctccc 177 |||||||||||| |||||||||||| Sbjct: 4198376 gccgccgccgcccccttcccctccc 4198400
>gb|AC102282.20| Mus musculus chromosome 5, clone RP24-319P5, complete sequence Length = 175569 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cttcccctccctccactactc 187 ||||||||||||||||||||| Sbjct: 154098 cttcccctccctccactactc 154078
>gb|AY727900.1| Leishmania major polyamine transporter (POT1) gene, complete cds Length = 2412 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 tggacgaggtcgccgtcgcca 84 ||||||||||||||||||||| Sbjct: 68 tggacgaggtcgccgtcgcca 48
>emb|AJ242540.1|VCA242540 Volvox carteri mRNA for hydroxyproline-rich glycoprotein (HRGP gene) Length = 1230 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 gccgccgccgccaccttcccc 173 ||||||||||||||||||||| Sbjct: 1080 gccgccgccgccaccttcccc 1100
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104999 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 gccgccgccgccaccttcccctccc 177 |||||||||||| |||||||||||| Sbjct: 85407 gccgccgccgcccccttcccctccc 85383
>gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, complete sequence Length = 217058 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 ccaccttcccctccctccact 183 ||||||||||||||||||||| Sbjct: 75892 ccaccttcccctccctccact 75912 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 91,738,160 Number of extensions: 5413386 Number of successful extensions: 127314 Number of sequences better than 10.0: 16 Number of HSP's gapped: 127314 Number of HSP's successfully gapped: 16 Length of query: 707 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 685 Effective length of database: 18,508,616,841 Effective search space: 12678402536085 Effective search space used: 12678402536085 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
