ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38f24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK072548:Os12g0210800 543 e-154
2AY224480:Os12g0210800 542 e-154
3AK064518:Os12g0210800 56 6e-08
4Os09g0365900:Os09g0365900 32 0.87
5Os01g0840300:Os01g0840300 32 1.1
6AK111295:Os11g0671100 31 1.9
7AK109989: 30 3.3
8AK120407:Os03g0699300 30 3.3
9AK110145:Os09g0535200 30 3.3
10AK107635:Os09g0572500 30 4.3
11AK100405:Os06g0219800 30 5.6
12AK069581:Os03g0765200 30 5.6
13Os08g0549900:Os08g0549900 29 7.4
14Os02g0193000:Os02g0193000 29 7.4
15AK120709:Os03g0374600 29 7.4
16AK110542:Os03g0374600 29 7.4
17Os08g0159800:Os08g0159800 29 9.6
18AK120918: 29 9.6
19AK119445: 29 9.6
20AK121343:Os07g0619800 29 9.6
21AK103874:Os01g0978000 29 9.6
22AK102326:Os01g0978000 29 9.6 
>AK072548:Os12g0210800 |
          Length = 317
 Score =  543 bits (1399), Expect = e-154
 Identities = 271/298 (90%), Positives = 278/298 (93%)
 Frame = +3

Query: 258  AADPQGRMDAPSVALYSQLKAAQPFFLFAGPNVIESEEHVMKMAKHIKAITTKLGVPLVF 437
            AA     MDA SVALY QLKAAQPFFL AGPNVIESEEHV+KMAKHIK ITTKLG+PLVF
Sbjct: 20   AAAASEAMDASSVALYGQLKAAQPFFLLAGPNVIESEEHVLKMAKHIKGITTKLGLPLVF 79

Query: 438  KSSFDKANRTSSKSFRGPGLEQGLKILEKVKAAYDLPVVTDVHESSQCEAVGRVADIIQI 617
            KSSFDKANRTSSKSFRGPGLE+GLKILEKVKA YD+PVVTDVHES QCEAVGRVADIIQI
Sbjct: 80   KSSFDKANRTSSKSFRGPGLEEGLKILEKVKATYDIPVVTDVHESHQCEAVGRVADIIQI 139

Query: 618  PAFLCRQTDLLVAAAKTGKIINIKKGQFCAPSVMVNSAEKIRLAGNQNVMVCERGTMFGY 797
            PAFLCRQTDLLVAAAKTGKIINIKKGQFCAPSVM NSAEKIRLAGNQNVMVCERGTMFGY
Sbjct: 140  PAFLCRQTDLLVAAAKTGKIINIKKGQFCAPSVMANSAEKIRLAGNQNVMVCERGTMFGY 199

Query: 798  NDLIVDPRNFEWLREANCPVVADVTHALQQPAGKKLDGGGVASGGLRELIPCIARTAVAV 977
            NDLIVDPRNFEWLREANCPVVADVTHALQQPAGKKLDGGGVASGGLRELIPCIART+VAV
Sbjct: 200  NDLIVDPRNFEWLREANCPVVADVTHALQQPAGKKLDGGGVASGGLRELIPCIARTSVAV 259

Query: 978  GVDGIFMEVHDDPLNSPCDGPTQWPLRNXXXXXXXXIAIARVSKGKKPLKIDLTPFKE 1151
            GVDGIFMEVHDDPLN+PCDGPTQWPLRN        IAIARV+KGKKPLKIDLTPFKE
Sbjct: 260  GVDGIFMEVHDDPLNAPCDGPTQWPLRNLEELLEELIAIARVTKGKKPLKIDLTPFKE 317
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>AY224480:Os12g0210800 |
          Length = 291

 Score =  542 bits (1397), Expect = e-154
 Identities = 269/291 (92%), Positives = 276/291 (94%)
 Frame = +3

Query: 279  MDAPSVALYSQLKAAQPFFLFAGPNVIESEEHVMKMAKHIKAITTKLGVPLVFKSSFDKA 458
            MDA SVALY QLKAAQPFFL AGPNVIESEEHV+KMAKHIK ITTKLG+PLVFKSSFDKA
Sbjct: 1    MDASSVALYGQLKAAQPFFLLAGPNVIESEEHVLKMAKHIKGITTKLGLPLVFKSSFDKA 60

Query: 459  NRTSSKSFRGPGLEQGLKILEKVKAAYDLPVVTDVHESSQCEAVGRVADIIQIPAFLCRQ 638
            NRTSSKSFRGPGLE+GLKILEKVKA YD+PVVTDVHES QCEAVGRVADIIQIPAFLCRQ
Sbjct: 61   NRTSSKSFRGPGLEEGLKILEKVKATYDIPVVTDVHESHQCEAVGRVADIIQIPAFLCRQ 120

Query: 639  TDLLVAAAKTGKIINIKKGQFCAPSVMVNSAEKIRLAGNQNVMVCERGTMFGYNDLIVDP 818
            TDLLVAAAKTGKIINIKKGQFCAPSVM NSAEKIRLAGNQNVMVCERGTMFGYNDLIVDP
Sbjct: 121  TDLLVAAAKTGKIINIKKGQFCAPSVMANSAEKIRLAGNQNVMVCERGTMFGYNDLIVDP 180

Query: 819  RNFEWLREANCPVVADVTHALQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGIFM 998
            RNFEWLREANCPVVADVTHALQQPAGKKLDGGGVASGGLRELIPCIART+VAVGVDGIFM
Sbjct: 181  RNFEWLREANCPVVADVTHALQQPAGKKLDGGGVASGGLRELIPCIARTSVAVGVDGIFM 240

Query: 999  EVHDDPLNSPCDGPTQWPLRNXXXXXXXXIAIARVSKGKKPLKIDLTPFKE 1151
            EVHDDPLN+PCDGPTQWPLRN        IAIARV+KGKKPLKIDLTPFKE
Sbjct: 241  EVHDDPLNAPCDGPTQWPLRNLEELLEELIAIARVTKGKKPLKIDLTPFKE 291
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>AK064518:Os12g0210800 |
          Length = 40

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +3

Query: 636 QTDLLVAAAKTGKIINIKKGQFCAPSV 716
           QTDLLVAAAKTGKIINIKKGQFCAPSV
Sbjct: 1   QTDLLVAAAKTGKIINIKKGQFCAPSV 27
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>Os09g0365900:Os09g0365900 |
          Length = 577

 Score = 32.3 bits (72), Expect = 0.87
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -2

Query: 1036 PSHGEFRGSSCTSMKIPSTPTATAVLAMHGMSSRKPPLATPPPSSFFPA 890
            P+   +  S+  S K P+TPT TAVLA +G     P    P P    PA
Sbjct: 297  PNRNYWLASNVVSRK-PATPTGTAVLAYYGGRRNSPRARPPTPPPAGPA 344
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>Os01g0840300:Os01g0840300 |
          Length = 313

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -2

Query: 1036 PSHGEFRGSSCTSMKIPSTPTATAVLAMHGMSSRKPPLATPPPSSFF 896
            P H   R  S  +   P+TP+A+A  +    SS  P    PP   FF
Sbjct: 260  PDHKPLRAGSACAAVSPTTPSASASFSWESESSDSPSSEAPPFYDFF 306
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>AK111295:Os11g0671100 |
          Length = 97

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 893 WEKA*WWRGCKWGLTRTHTMHC 958
           W +  WWRGC  G TR+ T  C
Sbjct: 19  WRRGSWWRGCSPGGTRSSTRCC 40
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>AK109989: |
          Length = 935

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 27/85 (31%), Positives = 34/85 (40%)
 Frame = -2

Query: 472 DDVRFALSKLDLNTRGTPSLVVMALMCLAIFMTCSSDSITLGPANKKNG*AAFSWLYSAT 293
           D +RFA S  DLNT  T SL   A       M  S+D       + K+G          T
Sbjct: 111 DIMRFANSHDDLNTCSTASLSTSASTSYRSMMGLSTDLTDPDSPHSKHG----------T 160

Query: 292 DGASILPCGSAAGLRSLLGRGDEDP 218
              +I  C S+   RS LG    +P
Sbjct: 161 RNTTITSCSSSDRARSDLGFHSSEP 185
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>AK120407:Os03g0699300 |
          Length = 489

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
 Frame = +3

Query: 843  ANCPVVADVTHALQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGIFMEVHDDPLN 1022
            A C   A+  H +    GKK     V SG L E   C+      V + G F E+  D L 
Sbjct: 95   ARCQGGANAGHTIYNSEGKKFSLHLVPSGILNEKTMCVVGNGAVVHLPGFFKEI--DGLE 152

Query: 1023 S---PCDG 1037
            S    C+G
Sbjct: 153  SNGISCEG 160
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>AK110145:Os09g0535200 |
          Length = 861

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -2

Query: 1042 VGPSHGEFRGSSCTSMKIPSTPTA-TAVLAMHGMSS--RKPPLATPPPSS 902
            V P+   +  S   +    + P A TA LA+H  +   R PP+ATPPP++
Sbjct: 609  VSPTTARYSFSDSGASSSSAAPRASTAPLALHAPAPHLRAPPVATPPPAA 658
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>AK107635:Os09g0572500 |
          Length = 541

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
 Frame = -2

Query: 1015 GSSCTSMKIPSTPTATAVLAMHGMSSRKPP----------LATPPPSSFFPAGCCSACVT 866
            GSS TS   P+  T++ ++   G+  R PP           +  P SS+ PA C +A  T
Sbjct: 440  GSSPTSEATPTPSTSSQLIPPPGLGGRPPPAPAAQASSIMTSMSPRSSWGPA-CSTAPST 498

Query: 865  SATTGQFASLS 833
            ++ T   AS S
Sbjct: 499  TSPTAATASTS 509
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>AK100405:Os06g0219800 |
          Length = 420

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 6/51 (11%)
 Frame = -2

Query: 988 PSTPTATAVLAMHGMSSRKPP---LATPPPSSFFPAG---CCSACVTSATT 854
           P  PT T   AM    S  PP    + PPP S   AG    C +C    TT
Sbjct: 14  PPPPTTTTPAAMSNPESNPPPPSATSCPPPGSAAHAGHAPLCRSCGAPTTT 64
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>AK069581:Os03g0765200 |
          Length = 470

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
 Frame = +3

Query: 399 KAITTKLGVPLVFKSSFDKANRTSSKSFRGPGLEQGLKIL-EKVKAAYDLPVVTDVHESS 575
           K +   + VPL+++SS  +     SKS   P  + G +IL +KV   +  P + D+    
Sbjct: 305 KTVFAAVTVPLLYRSSLAEPRSIPSKSMY-PTFDVGDRILADKVSYVFREPNILDI---- 359

Query: 576 QCEAVGRVADIIQIPAFLCRQTDLLV--AAAKTGKIINIKKGQFCAPSVM 719
               + R   ++Q  A  C   D+ +    AK G  + ++ G+     V+
Sbjct: 360 ---VIFRAPPVLQ--ALGCSSGDVFIKRIVAKGGDTVEVRDGKLLVNGVV 404
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>Os08g0549900:Os08g0549900 |
          Length = 268

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
 Frame = -2

Query: 1288 RQSNKA*SRQ*IKVPHTKSNS----PGHGHIG---ETKWRRRGYSYCYPLPNHS 1148
            R +N    R  + + H +S +    P HG  G      W R    YC+PLP+ S
Sbjct: 47   RDTNATHPRVRLPLAHQRSQADMWAPRHGRPGPRVSEAWHRAAQLYCFPLPSSS 100
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>Os02g0193000:Os02g0193000 |
          Length = 689

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 11  PPAESKPPSALSPPLRFIPPPG 76
           PPA++ PP A +PP R  PPPG
Sbjct: 260 PPAQAPPPPAPAPP-RAQPPPG 280
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>AK120709:Os03g0374600 |
          Length = 478

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = -2

Query: 1036 PSHGE--FRGSSCTSMKIPSTPTATAVLAMHGMSSRKPPLATPPPSSFFP 893
            PS G   F GSS       S P A+    +   +   PP+ T PP+ F P
Sbjct: 343  PSSGSCVFTGSSMAGGSNTSVPGASPPTTLSPPAGLTPPVGTSPPTDFSP 392
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>AK110542:Os03g0374600 |
          Length = 429

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = -2

Query: 1036 PSHGE--FRGSSCTSMKIPSTPTATAVLAMHGMSSRKPPLATPPPSSFFP 893
            PS G   F GSS       S P A+    +   +   PP+ T PP+ F P
Sbjct: 294  PSSGSCVFTGSSMAGGSNTSVPGASPPTTLSPPAGLTPPVGTSPPTDFSP 343
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>Os08g0159800:Os08g0159800 |
          Length = 367

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
 Frame = -3

Query: 150 AWRTVXXXXXXXDGWGTEE----QTEASSPGGGMKRSGGERADGGLLSAGG 10
           AW            W TE+    Q  A   GGG  R+G E+   G  S GG
Sbjct: 18  AWANAAAQGGDAGIWATEDDYNSQWNADGGGGGSSRAGSEQPPPGKKSRGG 68
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>AK120918: |
          Length = 151

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -2

Query: 1012 SSCTSMKIPSTPTATAVLAMHGMSSRKPPLATPP--PSSFFP 893
            SSC  +  P++P   A L    ++S  PP +  P  P+SF P
Sbjct: 20   SSCRHLLFPASPRVAAGLPTPAVASSHPPASVLPRRPASFSP 61
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>AK119445: |
          Length = 151

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -2

Query: 1012 SSCTSMKIPSTPTATAVLAMHGMSSRKPPLATPP--PSSFFP 893
            SSC  +  P++P   A L    ++S  PP +  P  P+SF P
Sbjct: 20   SSCRHLLFPASPRVAARLPTPAVASSHPPASVLPRRPASFSP 61
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>AK121343:Os07g0619800 |
          Length = 546

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
 Frame = -2

Query: 1039 GPSHGEFRGSSCTSMKIPSTPTATAVLAMHGMSSRKPPLATPPPSSFFP---AGCC 881
            GP+    RG      + PS+ +     A+   SSR PP   PPP    P    GCC
Sbjct: 25   GPARPPPRGRRSRGRR-PSSGSPRPARALRTTSSRPPPRGGPPPRPRPPRPRGGCC 79
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>AK103874:Os01g0978000 |
          Length = 134

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 861  ADVTHALQQPAGKKLDGGGVASGGLRELIPCIAR-TAVAVGVDGIFMEVH 1007
            A V   LQ+ A     GGG  +GG+   I CIAR   VA   +GI   +H
Sbjct: 29   AKVRLQLQKKAALATGGGGGTTGGMLGTIMCIAREEGVAALWNGIIPGLH 78
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>AK102326:Os01g0978000 |
          Length = 134

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 861  ADVTHALQQPAGKKLDGGGVASGGLRELIPCIAR-TAVAVGVDGIFMEVH 1007
            A V   LQ+ A     GGG  +GG+   I CIAR   VA   +GI   +H
Sbjct: 29   AKVRLQLQKKAALATGGGGGTTGGMLGTIMCIAREEGVAALWNGIIPGLH 78


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 45,059,763
Number of extensions: 1103150
Number of successful extensions: 4936
Number of sequences better than 10.0: 22
Number of HSP's gapped: 4862
Number of HSP's successfully gapped: 22
Length of query: 486
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 381
Effective length of database: 11,195,550
Effective search space: 4265504550
Effective search space used: 4265504550
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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