>P24504:NUP3_PENSQ Nuclease PA3 - Penicillium sp.|
          Length = 270
 Score =  120 bits (300), Expect = 1e-26
 Identities = 81/269 (30%), Positives = 132/269 (49%), Gaps = 14/269 (5%)
 Frame = +2

Query: 131 WGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRY--RWSRSLH 304
           WG  GH     +A  +++ EA +  + +L S ++  LA + SWAD  R     +WS SLH
Sbjct: 1   WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60

Query: 305 FADT----PGDCKFSYARDCHDTKGNKNVCVVGAINNYTAALQDSS-SPFDPTESLMFLA 469
           F D     P +C   Y RDC       + C + AI NYT  + DSS S  +  E+L FL 
Sbjct: 61  FIDAEDNPPTNCNVDYERDC-----GSSGCSISAIANYTQRVSDSSLSSENHAEALRFLV 115

Query: 470 HFVGDVHQPMHCGHVDDLGGNTIKLRWYRRKSNLHHVWDSDVITQAMKDFFDKDQDAMIE 649
           HF+GD+ QP+H      +GGN I + +     NLH  WD+ +  + +      D ++  +
Sbjct: 116 HFIGDMTQPLH-DEAYAVGGNKINVTFDGYHDNLHSDWDTYMPQKLIGGHALSDAESWAK 174

Query: 650 SIQRNI-TDDWSSEEKQWEACR--SKTTTCAEKYAQESAVLACDAY----EGVEQDDTLG 808
           ++ +NI + +++++   W      S+  T A ++A ++  L C           Q   L 
Sbjct: 175 TLVQNIESGNYTAQATGWIKGDNISEPITTATRWASDANALVCTVVMPHGAAALQTGDLY 234

Query: 809 DEYYFKALPVVQKRLAQGGVRLAAILNRI 895
             YY   +  ++ ++A+GG RLA  +N I
Sbjct: 235 PTYYDSVIDTIELQIAKGGYRLANWINEI 263

>P24289:NUP1_PENCI Nuclease P1 - Penicillium citrinum|
          Length = 270

 Score =  119 bits (298), Expect = 2e-26
 Identities = 81/269 (30%), Positives = 132/269 (49%), Gaps = 14/269 (5%)
 Frame = +2

Query: 131 WGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRY--RWSRSLH 304
           WG  GH     +A  +++ EA +  + +L S ++  LA + SWAD  R     +WS SLH
Sbjct: 1   WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60

Query: 305 FADT----PGDCKFSYARDCHDTKGNKNVCVVGAINNYTAALQDSS-SPFDPTESLMFLA 469
           F D     P +C   Y RDC       + C + AI NYT  + DSS S  +  E+L FL 
Sbjct: 61  FIDAEDNPPTNCNVDYERDC-----GSSGCSISAIANYTQRVSDSSLSSENHAEALRFLV 115

Query: 470 HFVGDVHQPMHCGHVDDLGGNTIKLRWYRRKSNLHHVWDSDVITQAMKDFFDKDQDAMIE 649
           HF+GD+ QP+H      +GGN I + +     NLH  WD+ +  + +      D ++  +
Sbjct: 116 HFIGDMTQPLH-DEAYAVGGNKINVTFDGYHDNLHSDWDTYMPQKLIGGHALSDAESWAK 174

Query: 650 SIQRNI-TDDWSSEEKQWEACR--SKTTTCAEKYAQESAVLACDAY----EGVEQDDTLG 808
           ++ +NI + +++++   W      S+  T A ++A ++  L C           Q   L 
Sbjct: 175 TLVQNIESGNYTAQAIGWIKGDNISEPITTATRWASDANALVCTVVMPHGAAALQTGDLY 234

Query: 809 DEYYFKALPVVQKRLAQGGVRLAAILNRI 895
             YY   +  ++ ++A+GG RLA  +N I
Sbjct: 235 PTYYDSVIDTIELQIAKGGYRLANWINEI 263

>P24021:NUS1_ASPOR Nuclease S1 precursor - Aspergillus oryzae|
          Length = 287

 Score =  113 bits (283), Expect = 1e-24
 Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 14/271 (5%)
 Frame = +2

Query: 131 WGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRY--RWSRSLH 304
           WG  GH     IA  F+ S   +  + +L   +   LA V +WAD+ ++     +S+  H
Sbjct: 21  WGNLGHETVAYIAQSFVASSTESFCQNILGDDSTSYLANVATWADTYKYTDAGEFSKPYH 80

Query: 305 FADT----PGDCKFSYARDCHDTKGNKNVCVVGAINNYTAALQDSSSPFDPTESLMFLAH 472
           F D     P  C   Y RDC         C + AI NYT  L +S +  +   +L F+ H
Sbjct: 81  FIDAQDNPPQSCGVDYDRDCGSAG-----CSISAIQNYTNILLESPNGSEALNALKFVVH 135

Query: 473 FVGDVHQPMHCGHVDDLGGNTIKLRWYRRKSNLHHVWDSDVITQAMKDFFDKDQDAMIES 652
            +GD+HQP+H  ++ + GGN I + +    +NLHH+WD+++  +A   +         + 
Sbjct: 136 IIGDIHQPLHDENL-EAGGNGIDVTYDGETTNLHHIWDTNMPEEAAGGYSLSVAKTYADL 194

Query: 653 IQRNI-TDDWSSEEKQW-------EACRSKTTTCAEKYAQESAVLACDAYEGVEQDDTLG 808
           +   I T  +SS++  W       +   +     A+      + +  D    +   D L 
Sbjct: 195 LTERIKTGTYSSKKDSWTDGIDIKDPVSTSMIWAADANTYVCSTVLDDGLAYINSTD-LS 253

Query: 809 DEYYFKALPVVQKRLAQGGVRLAAILNRIFS 901
            EYY K+ PV ++ +A+ G RLAA L+ I S
Sbjct: 254 GEYYDKSQPVFEELIAKAGYRLAAWLDLIAS 284

>Q62504:MINT_MOUSE Msx2-interacting protein - Mus musculus (Mouse)|
          Length = 3644

 Score = 36.2 bits (82), Expect = 0.28
 Identities = 25/98 (25%), Positives = 45/98 (45%)
 Frame = +2

Query: 521 LGGNTIKLRWYRRKSNLHHVWDSDVITQAMKDFFDKDQDAMIESIQRNITDDWSSEEKQW 700
           +GGN IK+ +  R+S L      +   Q M+DF++   +     + ++  +DWS++ +  
Sbjct: 578 IGGNKIKVDFANRESQLAFYHCMEKSGQDMRDFYEMLTERRAGQMAQSKHEDWSADAQSP 637

Query: 701 EACRSKTTTCAEKYAQESAVLACDAYEGVEQDDTLGDE 814
             CR +     E Y+QE        YE V    T  ++
Sbjct: 638 HKCREERRGSYE-YSQERTY-----YENVRTPGTYPED 669

>Q9NX77:ENK14_HUMAN HERV-K_16p3.3 provirus ancestral Env polyprotein - Homo sapiens|
           (Human)
          Length = 482

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 12/48 (25%), Positives = 26/48 (54%)
 Frame = +2

Query: 593 VITQAMKDFFDKDQDAMIESIQRNITDDWSSEEKQWEACRSKTTTCAE 736
           ++T  + D  +  +  +++++   I  DW+ +   W+ C SK T C+E
Sbjct: 63  IVTSILWDNCNAPKAVVLQTLAMGIVIDWAPKGHYWQDCSSKNTLCSE 110


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 168,916,765
Number of extensions: 3508538
Number of successful extensions: 11324
Number of sequences better than 10.0: 5
Number of HSP's gapped: 11309
Number of HSP's successfully gapped: 5
Length of query: 399
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 284
Effective length of database: 69,142,514
Effective search space: 19636473976
Effective search space used: 19636473976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)