ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|D83178.1| Hordeum vulgare mRNA for endonuclease, complete cds 2123 0.0
2dbj|AB028448.1| Hordeum vulgare Bnuc1 mRNA for nuclease I, compl... 1053 0.0
3emb|AJ311603.1|HVU311603 Hordeum vulgare mRNA for putative nucle... 995 0.0
4dbj|AK106059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 9e-88
5ref|NM_001060636.1| Oryza sativa (japonica cultivar-group) Os04g... 329 1e-86
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 157 1e-34
7emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4,... 157 1e-34
8ref|NM_001048445.1| Oryza sativa (japonica cultivar-group) Os01g... 92 5e-15
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 92 5e-15
10dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic D... 92 5e-15
11dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic D... 92 5e-15
12dbj|AK120005.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 5e-15
13dbj|AK059608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 5e-15
14gb|AY105439.1| Zea mays PCO064225 mRNA sequence 84 1e-12
15gb|AY108503.1| Zea mays PCO102923 mRNA sequence 80 2e-11
16dbj|AK059436.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 3e-10
17gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 68 8e-08
18gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome... 68 8e-08
19dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 68 8e-08
20dbj|AK243128.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 48 0.074
21ref|NM_001062360.1| Oryza sativa (japonica cultivar-group) Os05g... 48 0.074
22gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.074
23dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.074
24gb|AE006002.1| Caulobacter crescentus CB15 section 328 of 359 of... 46 0.29
25gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 44 1.1
26gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CI... 44 1.1
27gb|AF542973.1| Triticum aestivum cyclophilin mRNA, partial cds 44 1.1
28gb|AY290733.1| Triticum aestivum cyclophilin mRNA, partial sequence 44 1.1
29gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, com... 44 1.1
30dbj|AB029755.1| Paralichthys olivaceus mRNA for elastase 1 precu... 44 1.1
31ref|NM_001065701.1| Oryza sativa (japonica cultivar-group) Os07g... 42 4.5
32gb|AC188063.1| Callithrix jacchus chromosome UNK clone CH259-66H... 42 4.5
33gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 42 4.5
34gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 4.5
35gb|AY260902.1| Rhodospirillum centenum che2 gene cluster, comple... 42 4.5
36gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 42 4.5
37gb|AC087900.19| Mus musculus strain C57BL/6J clone rp23-171i6 ma... 42 4.5
38gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, co... 42 4.5
39emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 42 4.5
40dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.5
41gb|AC132380.6| Mus musculus BAC clone RP23-414A20 from chromosom... 42 4.5
42dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 4.5
43gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 4.5
44gb|AC097499.3| Homo sapiens BAC clone RP11-333J2 from 2, complet... 42 4.5
45dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic D... 42 4.5
46dbj|AK120944.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 4.5
47gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, c... 42 4.5
48gb|AY109350.1| Zea mays CL844_1 mRNA sequence 42 4.5
49gb|AF159297.2| Zea mays pollen extensin-like protein (Pex2) gene... 42 4.5
50emb|AJ000062.1|MMAJ0062 Mus musculus partial gene encoding deoxy... 42 4.5

>dbj|D83178.1| Hordeum vulgare mRNA for endonuclease, complete cds
          Length = 1180
 Score = 2123 bits (1071), Expect = 0.0
 Identities = 1149/1175 (97%)
 Strand = Plus / Plus

                                                                        
Query: 8    agaagaaaagcaacacaagagagaaatagagagccaagcttgagctaagctaggatgggg 67
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    agaaggaaagcaacacaagagagaaatagagagccaagcttgagctaagctaggatgggg 60

                                                                        
Query: 68   ttgctcctgctgcttcaggtcctcctggtggccgcggcggcgagggccccggcggcgcag 127
            ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 61   ttgctcctgctgcttcaggtcctactggtggccgcggcggcgagggccccgggggcgcag 120

                                                                        
Query: 128  gcgtggggcaaggagggacactacatgacctgcaagatcgccgacggtttcctgacgagc 187
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gcgtggggcaaggagggccactacatgacctgcaagatcgccgacggtttcctgacgagc 180

                                                                        
Query: 188  gaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaacggcgagctcgcggag 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaacggcgagctcgcggag 240

                                                                        
Query: 248  gtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcccgctccctgcacttc 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcccgctccctgcacttc 300

                                                                        
Query: 308  gccgacacccccggcgactgcaagttcagctacgccagggactgccacgacaccaagggg 367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gccgacacccccggcgactgcaagttcagctacgccagggactgccacgacaccaagggg 360

                                                                        
Query: 368  aacaagaacgtgtgcgtggtcggggccatcaacaactacaccgccgcgctccaggactcg 427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  aacaagaacgtgtgcgtggtcggggccatcaacaactacaccgccgcgctccaggactcg 420

                                                                        
Query: 428  tccagcccatttgacccgacggagagcctgatgttcctggcgcacttcgtgggcgacgtg 487
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  tccagcccatttaacccgacggagagcctgatgttcctggcgcacttcgtgggcgacgtg 480

                                                                        
Query: 488  caccagccgatgcactgcggccacgtcgacgacctcggcggcaacaccatcaaactccga 547
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  caccagccgatgcactgcggccacgtcgacgacctcggcggcaacaccatcaaactccga 540

                                                                        
Query: 548  tggtacaggaggaagagcaacctgcaccacgtgtgggactcggacgtgatcacgcaggcc 607
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 541  tggtacaggaggaagagcaacctgcaccacgtgtgggactcggacgtgatcacgcagacc 600

                                                                        
Query: 608  atgaaggacttcttcgacaaggaccaggacgccatgatcgagtccatccagcgcaacatc 667
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  atgaaggacttcttcgacaaggaccaggacgccatgatcgagtccatccagcgcaacatc 660

                                                                        
Query: 668  accgacgactggtccagtgaggagaagcagtgggaggcgtgccgcagcaaaaccacgacc 727
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 661  accgacgactggtccagtgaggagaagcagtgggagacgtgccgcagcaaaaccacgacc 720

                                                                        
Query: 728  tgcgctgagaagtacgcccaggagagcgcggtgctggcatgcgacgcgtacgagggcgtc 787
            ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 721  tgcgccgaaaagtacgcccaggagagcgcggtgctggcatgcgacgcctacgagggcgtc 780

                                                                        
Query: 788  gagcaggacgacaccctaggagatgagtactacttcaaggcgctgccggtcgttcagaag 847
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 781  gagcaggacgacaccctaggagatgagtactacttcaaagcgctgccggtcgttcagaag 840

                                                                        
Query: 848  aggctcgctcaggggggcgtgaggctggcggcgatcctcaacaggatcttcagcgggaac 907
            |||||||| ||||||||| ||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 841  aggctcgcccaggggggcttgaggctggcggccatcctcaaccggatcttcagcgggaac 900

                                                                        
Query: 908  ggcaggctgcagagcatctgatcgatagaatttcgtcgaaataaagggagaacaatgtat 967
            |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 901  ggcaggctgcagagcatctgatcgatactatttcgtcgaaataaagggagaacaatgtat 960

                                                                        
Query: 968  aataagatcatcctgtctgaccaacgttgtagcttcgccaaaatcacctaattcgagatt 1027
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 961  aataagatcatcctgtctgaccaacgttatagcttcgccaaaatcacctaattcgagatt 1020

                                                                        
Query: 1028 agatttgttatccatccaccaaaacggctttagattcgctgctgcaggaaacctttctat 1087
            | |||| |||||||| ||||||| |||| |||||||||||||||||||||| |||| |||
Sbjct: 1021 aaatttcttatccattcaccaaagcggccttagattcgctgctgcaggaaatctttgtat 1080

                                                                        
Query: 1088 ctacacgtactgccgcagcaaatcattgtacctatatgtacgtacgtgtaaggcgatgta 1147
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1081 ctacacgtactgccgcagcaaatcattgtacctatatgtacgtacgtgtaaggcaatgta 1140

                                               
Query: 1148 ttgttgattgacacaattgtgtcattttcatttcc 1182
            |||||||||||||||||||||||||||||||||||
Sbjct: 1141 ttgttgattgacacaattgtgtcattttcatttcc 1175



to top

>dbj|AB028448.1| Hordeum vulgare Bnuc1 mRNA for nuclease I, complete cds
          Length = 1283

 Score = 1053 bits (531), Expect = 0.0
 Identities = 790/875 (90%), Gaps = 6/875 (0%)
 Strand = Plus / Plus

                                                                       
Query: 61  gatggggttgctcctgctgcttcaggtcctcctggtggccgcggcggcgagggccccggc 120
           ||||||| |||| |||||||||||||| |||||||  ||    | |||||| || |||||
Sbjct: 82  gatggggctgctgctgctgcttcaggtgctcctggccgcgatcgtggcgagagcgccggc 141

                                                                       
Query: 121 ggcgcaggcgtggggcaaggagggacactacatgacctgcaagatcgccgacggtttcct 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 142 ggcgcaggcgtggggcaaggaggggcactacatgacctgcaagatcgccgatggtttcct 201

                                                                       
Query: 181 gacgagcgaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaacggcgagct 240
           |||||||||||| | | ||| ||||||||  ||||| |||||||||||||||||||||||
Sbjct: 202 gacgagcgaggcatcggcggcggtgaaggacctcctgccgtcgtgggccaacggcgagct 261

                                                                       
Query: 241 cgcggaggtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcccgctccct 300
           ||||||||||||| ||||||||||||| |||||||||||||||||||||||  |  ||||
Sbjct: 262 cgcggaggtgtgcgcgtgggcggacaggcagcgcttccggtaccggtggtcaagtcccct 321

                                                                       
Query: 301 gcacttcgccgacacccccggcgactgcaagttcagctacgccagggactgccacgacac 360
           ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 322 gcacttcgccgacacccccggtgactgcaacttcagctacgccagggactgccacgacac 381

                                                                       
Query: 361 caaggggaacaagaacgtgtgcgtggtcggggccatcaacaactacaccgccgcgctcca 420
           ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||| |
Sbjct: 382 caaggggaacaaggacgtgtgcgtggtgggagccatcaacaactacaccgccgcgctcga 441

                                                                       
Query: 421 ggactcgtccagcccatttgacccgacggagagcctgatgttcctggcgcacttcgtggg 480
           |||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggacccgtccagcccgtatgacccgacggagagcctgatgttcctggcgcacttcgtggg 501

                                                                       
Query: 481 cgacgtgcaccagccgatgcactgcggccacgtcgacgacctcggcggcaacaccatcaa 540
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cgacgtgcaccagccactgcactgcggccacgtcgacgacctcggcggcaacaccatcaa 561

                                                                       
Query: 541 actccgatggtacaggaggaagagcaacctgcaccacgtgtgggactcggacgtgatcac 600
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 562 actccgatggtacaggaggaagagcaacctgcaccacgtgtgggattcggacgtgatcac 621

                                                                       
Query: 601 gcaggccatgaaggacttcttcgacaaggaccaggacgccatgatcgagtccatccagcg 660
            ||||||||||||||||| ||| ||| |||||||||| ||||||||||| ||||||||||
Sbjct: 622 acaggccatgaaggactttttcaacagggaccaggacaccatgatcgaggccatccagcg 681

                                                                       
Query: 661 caacatcaccgacgactggtccagtgaggagaagcagtgggaggcgtgccgcagcaaaac 720
           |||||||||||| ||||||||||| ||||||||||| |||||||||||| |||||| |||
Sbjct: 682 caacatcaccgatgactggtccagcgaggagaagcaatgggaggcgtgcggcagcagaac 741

                                                                       
Query: 721 cacga---cctgcgctgagaagtacgcccaggagagcgcggtgctggcatgcgacgcgta 777
           || ||   ||||||| || ||||||||| ||||||||||  ||||||| |||||||||||
Sbjct: 742 caagatcacctgcgccgaaaagtacgccaaggagagcgcattgctggcctgcgacgcgta 801

                                                                       
Query: 778 cgagggcgtcgagcaggacgacaccctaggagatgagtactacttcaaggcgctgccggt 837
           ||||||||||||||| | ||||||| ||||||| || || ||||||  |||| |||||||
Sbjct: 802 cgagggcgtcgagcaaggcgacaccttaggagacgactattacttccgggcgttgccggt 861

                                                                       
Query: 838 cgttcagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaacaggatctt 897
            ||  |||||||| | |||||||| |||||||||||||||| |||||| |||  ||||||
Sbjct: 862 tgtcgagaagaggatagctcagggaggcgtgaggctggcggtgatccttaaccagatctt 921

                                              
Query: 898 cagcgggaacg---gcaggctgcagagcatctgat 929
           ||| |||||     |||||||||||||||||||||
Sbjct: 922 cagtgggaagaatagcaggctgcagagcatctgat 956



to top

>emb|AJ311603.1|HVU311603 Hordeum vulgare mRNA for putative nuclease (bnuc2 gene)
          Length = 1139

 Score =  995 bits (502), Expect = 0.0
 Identities = 808/908 (88%), Gaps = 4/908 (0%)
 Strand = Plus / Plus

                                                                       
Query: 61  gatggggttgctcctgctgcttcaggtcctcctggtggccgcggcggcgagggccccggc 120
           |||||| ||||| |||||||| || ||| ||||||| || ||||||||| | ||||| ||
Sbjct: 61  gatgggcttgctgctgctgctccacgtcgtcctggtcgcggcggcggcgggagccccagc 120

                                                                       
Query: 121 ggcgcaggcgtggggcaaggagggacactacatgacctgcaagatcgccgacggtttcct 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 121 ggcgcaggcgtggggcaaggaggggcactacatgacctgcaagatcgccgatggtttcct 180

                                                                       
Query: 181 gacgagcgaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaacggcgagct 240
           |||||  ||||||| | ||||||||||||  ||||||||||||| |||||||||||||||
Sbjct: 181 gacgaaggaggcgtcggcgggggtgaaggatctcctcccgtcgtcggccaacggcgagct 240

                                                                       
Query: 241 cgcggaggtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcccgctccct 300
           |||||||||||||||||||||||| ||||||||||||||||||||||||||  || | ||
Sbjct: 241 cgcggaggtgtgctcgtgggcggatagccagcgcttccggtaccggtggtcgagcccgct 300

                                                                       
Query: 301 gcacttcgccgacacccccggcgactgcaagttcagctacgccagggactgccacgacac 360
           ||||||||| ||||||||    ||||||||||||||||||||| ||||||||||||||||
Sbjct: 301 gcacttcgctgacaccccaaaagactgcaagttcagctacgcccgggactgccacgacac 360

                                                                       
Query: 361 caaggggaacaagaacgtgtgcgtggtcggggccatcaacaactacaccgccgcgctcca 420
           ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 361 caaggggaacaaggacgcgtgcgtggtcggggccattaacaactacaccgccgccctgca 420

                                                                       
Query: 421 ggactcgtccagcccatttgacccgacggagagcctgatgttcctggcgcacttcgtggg 480
           |||| | || |  || | | | | |||||||||||||||||||||||| |||||||| ||
Sbjct: 421 ggacccatctaatccgtataatcggacggagagcctgatgttcctggcccacttcgtcgg 480

                                                                       
Query: 481 cgacgtgcaccagccgatgcactgcggccacgtcgacgacctcggcggcaacaccatcaa 540
           |||||||||||||||| |||||||||||| ||| || |||||||||||||||||||||  
Sbjct: 481 cgacgtgcaccagccgctgcactgcggccgcgtggaagacctcggcggcaacaccatcct 540

                                                                       
Query: 541 actccgatggtacaggaggaagagcaacctgcaccacgtgtgggactcggacgtgatcac 600
             |||| |||||||||||||||||||||||||||||||||||||||  |||||| |||  
Sbjct: 541 cgtccgctggtacaggaggaagagcaacctgcaccacgtgtgggacgtggacgtcatcga 600

                                                                       
Query: 601 gcaggccatgaaggacttcttcgacaaggaccaggacgccatgatcgagtccatccagcg 660
           |||||||||||||||||| | || ||  ||||||||| |||||||| || ||||||||||
Sbjct: 601 gcaggccatgaaggacttgtacggcagagaccaggacaccatgatcaaggccatccagcg 660

                                                                       
Query: 661 caacatcaccgacgactggtccagtgaggagaagcagtgggaggcgtgccgcagcaaaac 720
            ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 661 taacatcaccgaggactggtccagcgaggagaagcagtgggaggcgtgccgcagcagaac 720

                                                                       
Query: 721 cacgacctgcgctgagaagtacgcccaggagagcgcggtgctggcatgcgacgcgtacga 780
           || |||||||||||| ||||||||  ||||||| || |||||||| |||||||||||| |
Sbjct: 721 caagacctgcgctgacaagtacgctgaggagagtgcagtgctggcctgcgacgcgtacaa 780

                                                                       
Query: 781 gggcgtcgagcaggacgacaccctaggagatgagtactacttcaaggcgctgccggtcgt 840
           ||||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 781 gggcgtcaagcaggactccaccttaggagatgagtactacttcaaggcgctgccggtcgt 840

                                                                       
Query: 841 tcagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaacaggatcttcag 900
           ||||||| || |||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 841 tcagaagcggatcgctcagggcggcgtcaggctggcggcgatcctcaaccggatcttcag 900

                                                                       
Query: 901 cgg---gaacggcaggctgcagagcatctgatcgatagaatttcgtcgaaataaagggag 957
           |||   |||||||| ||||||||||||||||||| |  |||||| |||||||||||| ||
Sbjct: 901 cgggaagaacggcaagctgcagagcatctgatcg-tgcaatttcatcgaaataaaggaag 959

                   
Query: 958 aacaatgt 965
           || |||||
Sbjct: 960 aagaatgt 967



 Score = 46.1 bits (23), Expect = 0.29
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 1104 agcaaatcattgtacctatatgtacgtacgtgtaaggcgatgtattg 1150
            |||||||||||||| || |||| ||||| ||||| || |||||||||
Sbjct: 1066 agcaaatcattgtatctgtatgaacgtaagtgtatggtgatgtattg 1112



to top

>dbj|AK106059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F11, full
           insert sequence
          Length = 1146

 Score =  333 bits (168), Expect = 9e-88
 Identities = 402/480 (83%)
 Strand = Plus / Plus

                                                                       
Query: 106 ggcgagggccccggcggcgcaggcgtggggcaaggagggacactacatgacctgcaagat 165
           |||||| |||||  |||| || ||||||||||||||||| |||||||||   ||||||||
Sbjct: 80  ggcgagagcccccacggcccacgcgtggggcaaggagggccactacatggtgtgcaagat 139

                                                                       
Query: 166 cgccgacggtttcctgacgagcgaggcgttgacgggggtgaaggcgctcctcccgtcgtg 225
           |||||| |||||||||||||  ||||||  ||||| |||||||| |||||||||   |||
Sbjct: 140 cgccgagggtttcctgacgaaggaggcggcgacggcggtgaaggagctcctccccgggtg 199

                                                                       
Query: 226 ggccaacggcgagctcgcggaggtgtgctcgtgggcggacagccagcgcttccggtaccg 285
           ||||  |||||||||||||||   ||||||||||||||||| | |||| |||||||||||
Sbjct: 200 ggccggcggcgagctcgcggaaacgtgctcgtgggcggacaccgagcggttccggtaccg 259

                                                                       
Query: 286 gtggtcccgctccctgcacttcgccgacacccccggcgactgcaagttcagctacgccag 345
           ||||||  || |||| ||||||||||||||||||||||||||| |||||| ||||||| |
Sbjct: 260 gtggtcgagccccctccacttcgccgacacccccggcgactgccagttcaactacgcccg 319

                                                                       
Query: 346 ggactgccacgacaccaaggggaacaagaacgtgtgcgtggtcggggccatcaacaacta 405
           ||| |||||| |||| || ||  | ||| || |||| |||||||| || |||||||||||
Sbjct: 320 ggattgccacaacacaaacggtgagaaggacatgtgtgtggtcggagcgatcaacaacta 379

                                                                       
Query: 406 caccgccgcgctccaggactcgtccagcccatttgacccgacggagagcctgatgttcct 465
           ||||  ||||||| ||||||| || || |||| ||| || || |||||| |||||||| |
Sbjct: 380 caccaacgcgctcgaggactcatcaagtccatatgatccaaccgagagcttgatgttctt 439

                                                                       
Query: 466 ggcgcacttcgtgggcgacgtgcaccagccgatgcactgcggccacgtcgacgacctcgg 525
           ||| |||||||| |||||||| ||||||||  | ||||||||||||||| | || || ||
Sbjct: 440 ggcacacttcgtcggcgacgttcaccagcctctccactgcggccacgtcaaagatcttgg 499

                                                                       
Query: 526 cggcaacaccatcaaactccgatggtacaggaggaagagcaacctgcaccacgtgtggga 585
            |||||||||||||   |||  |||||||  |||||||||||||| || |||||||||||
Sbjct: 500 tggcaacaccatcatcgtccattggtacacaaggaagagcaaccttcatcacgtgtggga 559



 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                       
Query: 830 ctgccggtcgttcagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaac 889
           ||||| || |||||||||||| | ||||| || ||||||||||| || || || ||||||
Sbjct: 804 ctgcctgttgttcagaagaggattgctcaaggtggcgtgaggcttgctgcaatactcaac 863

                             
Query: 890 aggatcttcagcgggaac 907
            |||||||||||||||||
Sbjct: 864 cggatcttcagcgggaac 881



to top

>ref|NM_001060636.1| Oryza sativa (japonica cultivar-group) Os04g0652700 (Os04g0652700)
           mRNA, complete cds
          Length = 1146

 Score =  329 bits (166), Expect = 1e-86
 Identities = 385/458 (84%)
 Strand = Plus / Plus

                                                                       
Query: 128 gcgtggggcaaggagggacactacatgacctgcaagatcgccgacggtttcctgacgagc 187
           ||||||||||||||||| |||||||||   |||||||||||||| |||||||||||||  
Sbjct: 102 gcgtggggcaaggagggccactacatggtgtgcaagatcgccgagggtttcctgacgaag 161

                                                                       
Query: 188 gaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaacggcgagctcgcggag 247
           ||||||  ||||| |||||||| |||||||||   |||||||  ||||||||||||||| 
Sbjct: 162 gaggcggcgacggcggtgaaggagctcctccccgggtgggccggcggcgagctcgcggaa 221

                                                                       
Query: 248 gtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcccgctccctgcacttc 307
             ||||||||||||||||| | |||| |||||||||||||||||  || |||| ||||||
Sbjct: 222 acgtgctcgtgggcggacaccgagcggttccggtaccggtggtcgagccccctccacttc 281

                                                                       
Query: 308 gccgacacccccggcgactgcaagttcagctacgccagggactgccacgacaccaagggg 367
           ||||||||||||||||||||| |||||| ||||||| |||| |||||| |||| || || 
Sbjct: 282 gccgacacccccggcgactgccagttcaactacgcccgggattgccacaacacaaacggt 341

                                                                       
Query: 368 aacaagaacgtgtgcgtggtcggggccatcaacaactacaccgccgcgctccaggactcg 427
            | ||| || |||| |||||||| || |||||||||||||||  ||||||| ||||||| 
Sbjct: 342 gagaaggacatgtgtgtggtcggagcgatcaacaactacaccaacgcgctcgaggactca 401

                                                                       
Query: 428 tccagcccatttgacccgacggagagcctgatgttcctggcgcacttcgtgggcgacgtg 487
           || || |||| ||| || || |||||| |||||||| |||| |||||||| |||||||| 
Sbjct: 402 tcaagtccatatgatccaaccgagagcttgatgttcttggcacacttcgtcggcgacgtt 461

                                                                       
Query: 488 caccagccgatgcactgcggccacgtcgacgacctcggcggcaacaccatcaaactccga 547
           ||||||||  | ||||||||||||||| | || || || |||||||||||||   |||  
Sbjct: 462 caccagcctctccactgcggccacgtcaaagatcttggtggcaacaccatcatcgtccat 521

                                                 
Query: 548 tggtacaggaggaagagcaacctgcaccacgtgtggga 585
           |||||||  |||||||||||||| || |||||||||||
Sbjct: 522 tggtacacaaggaagagcaaccttcatcacgtgtggga 559



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 194/246 (78%)
 Strand = Plus / Plus

                                                                       
Query: 662 aacatcaccgacgactggtccagtgaggagaagcagtgggaggcgtgccgcagcaaaacc 721
           |||||||| || || |||||||  |||||||||||||||||| | ||||| |||   || 
Sbjct: 636 aacatcactgatgagtggtccaccgaggagaagcagtgggagacttgccgtagccggaca 695

                                                                       
Query: 722 acgacctgcgctgagaagtacgcccaggagagcgcggtgctggcatgcgacgcgtacgag 781
           | ||| || || || ||||||||| ||||||| ||   ||| || ||| | |||||||||
Sbjct: 696 aagacttgtgccgataagtacgccgaggagagtgcaaagctcgcgtgcaaagcgtacgag 755

                                                                       
Query: 782 ggcgtcgagcaggacgacaccctaggagatgagtactacttcaaggcgctgccggtcgtt 841
           || || ||||| ||   |||| ||| |||||| || | ||||   || ||||| || |||
Sbjct: 756 ggtgttgagcaagaatccaccttagaagatgactatttcttcgctgccctgcctgttgtt 815

                                                                       
Query: 842 cagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaacaggatcttcagc 901
           ||||||||| | ||||| || ||||||||||| || || || |||||| |||||||||||
Sbjct: 816 cagaagaggattgctcaaggtggcgtgaggcttgctgcaatactcaaccggatcttcagc 875

                 
Query: 902 gggaac 907
           ||||||
Sbjct: 876 gggaac 881



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  157 bits (79), Expect = 1e-34
 Identities = 148/171 (86%)
 Strand = Plus / Plus

                                                                            
Query: 173      ggtttcctgacgagcgaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaac 232
                |||||||||||||  ||||||  ||||| |||||||| |||||||||   |||||||  |
Sbjct: 33288049 ggtttcctgacgaaggaggcggcgacggcggtgaaggagctcctccccgggtgggccggc 33288108

                                                                            
Query: 233      ggcgagctcgcggaggtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcc 292
                ||||||||||||||   ||||||||||||||||| | |||| ||||||||||||||||| 
Sbjct: 33288109 ggcgagctcgcggaaacgtgctcgtgggcggacaccgagcggttccggtaccggtggtcg 33288168

                                                                   
Query: 293      cgctccctgcacttcgccgacacccccggcgactgcaagttcagctacgcc 343
                 || |||| ||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 33288169 agccccctccacttcgccgacacccccggcgactgccagttcaactacgcc 33288219



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                            
Query: 449      gagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcactgcggc 508
                |||||| |||||||| |||| |||||||| |||||||| ||||||||  | |||||||||
Sbjct: 33289343 gagagcttgatgttcttggcacacttcgtcggcgacgttcaccagcctctccactgcggc 33289402

                                                                            
Query: 509      cacgtcgacgacctcggcggcaacaccatcaaactccgatggtacaggaggaagagcaac 568
                |||||| | || || || |||||||||||||   |||  |||||||  ||||||||||||
Sbjct: 33289403 cacgtcaaagatcttggtggcaacaccatcatcgtccattggtacacaaggaagagcaac 33289462

                           
Query: 569      ctgcaccacgt 579
                || || |||||
Sbjct: 33289463 cttcatcacgt 33289473



 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                            
Query: 830      ctgccggtcgttcagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaac 889
                ||||| || |||||||||||| | ||||| || ||||||||||| || || || ||||||
Sbjct: 33290128 ctgcctgttgttcagaagaggattgctcaaggtggcgtgaggcttgctgcaatactcaac 33290187

                                  
Query: 890      aggatcttcagcgggaac 907
                 |||||||||||||||||
Sbjct: 33290188 cggatcttcagcgggaac 33290205



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 128      gcgtggggcaaggagggacactacatgacctgcaagatcgccga 171
                ||||||||||||||||| |||||||||   ||||||||||||||
Sbjct: 33287919 gcgtggggcaaggagggccactacatggtgtgcaagatcgccga 33287962



 Score = 50.1 bits (25), Expect = 0.019
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 378      tgtgcgtggtcggggccatcaacaactacaccgccgcgctccaggactc 426
                |||| |||||||| || |||||||||||||||  ||||||| |||||||
Sbjct: 33289166 tgtgtgtggtcggagcgatcaacaactacaccaacgcgctcgaggactc 33289214



to top

>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06,
             complete sequence
          Length = 151506

 Score =  157 bits (79), Expect = 1e-34
 Identities = 148/171 (86%)
 Strand = Plus / Plus

                                                                         
Query: 173   ggtttcctgacgagcgaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaac 232
             |||||||||||||  ||||||  ||||| |||||||| |||||||||   |||||||  |
Sbjct: 60310 ggtttcctgacgaaggaggcggcgacggcggtgaaggagctcctccccgggtgggccggc 60369

                                                                         
Query: 233   ggcgagctcgcggaggtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcc 292
             ||||||||||||||   ||||||||||||||||| | |||| ||||||||||||||||| 
Sbjct: 60370 ggcgagctcgcggaaacgtgctcgtgggcggacaccgagcggttccggtaccggtggtcg 60429

                                                                
Query: 293   cgctccctgcacttcgccgacacccccggcgactgcaagttcagctacgcc 343
              || |||| ||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 60430 agccccctccacttcgccgacacccccggcgactgccagttcaactacgcc 60480



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                         
Query: 449   gagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcactgcggc 508
             |||||| |||||||| |||| |||||||| |||||||| ||||||||  | |||||||||
Sbjct: 61604 gagagcttgatgttcttggcacacttcgtcggcgacgttcaccagcctctccactgcggc 61663

                                                                         
Query: 509   cacgtcgacgacctcggcggcaacaccatcaaactccgatggtacaggaggaagagcaac 568
             |||||| | || || || |||||||||||||   |||  |||||||  ||||||||||||
Sbjct: 61664 cacgtcaaagatcttggtggcaacaccatcatcgtccattggtacacaaggaagagcaac 61723

                        
Query: 569   ctgcaccacgt 579
             || || |||||
Sbjct: 61724 cttcatcacgt 61734



 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                         
Query: 830   ctgccggtcgttcagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaac 889
             ||||| || |||||||||||| | ||||| || ||||||||||| || || || ||||||
Sbjct: 62389 ctgcctgttgttcagaagaggattgctcaaggtggcgtgaggcttgctgcaatactcaac 62448

                               
Query: 890   aggatcttcagcgggaac 907
              |||||||||||||||||
Sbjct: 62449 cggatcttcagcgggaac 62466



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 128   gcgtggggcaaggagggacactacatgacctgcaagatcgccga 171
             ||||||||||||||||| |||||||||   ||||||||||||||
Sbjct: 60180 gcgtggggcaaggagggccactacatggtgtgcaagatcgccga 60223



 Score = 50.1 bits (25), Expect = 0.019
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 378   tgtgcgtggtcggggccatcaacaactacaccgccgcgctccaggactc 426
             |||| |||||||| || |||||||||||||||  ||||||| |||||||
Sbjct: 61427 tgtgtgtggtcggagcgatcaacaactacaccaacgcgctcgaggactc 61475



to top

>ref|NM_001048445.1| Oryza sativa (japonica cultivar-group) Os01g0128200 (Os01g0128200)
           mRNA, complete cds
          Length = 1290

 Score = 91.7 bits (46), Expect = 5e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                     
Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502
           |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct: 442 gacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcac 499



 Score = 50.1 bits (25), Expect = 0.019
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 378 tgtgcgtggtcggggccatcaacaactacaccg 410
           ||||||| |||||||| ||||||||||||||||
Sbjct: 366 tgtgcgttgtcggggctatcaacaactacaccg 398



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 91.7 bits (46), Expect = 5e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                         
Query: 445     gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502
               |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct: 1567241 gacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcac 1567298



 Score = 50.1 bits (25), Expect = 0.019
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 378     tgtgcgtggtcggggccatcaacaactacaccg 410
               ||||||| |||||||| ||||||||||||||||
Sbjct: 1567056 tgtgcgttgtcggggctatcaacaactacaccg 1567088



to top

>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0408F06
          Length = 137462

 Score = 91.7 bits (46), Expect = 5e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                      
Query: 445  gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502
            |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct: 4472 gacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcac 4529



 Score = 50.1 bits (25), Expect = 0.019
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 378  tgtgcgtggtcggggccatcaacaactacaccg 410
            ||||||| |||||||| ||||||||||||||||
Sbjct: 4287 tgtgcgttgtcggggctatcaacaactacaccg 4319



to top

>dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0409B08
          Length = 134673

 Score = 91.7 bits (46), Expect = 5e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                        
Query: 445    gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502
              |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct: 132889 gacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcac 132946



 Score = 50.1 bits (25), Expect = 0.019
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 378    tgtgcgtggtcggggccatcaacaactacaccg 410
              ||||||| |||||||| ||||||||||||||||
Sbjct: 132704 tgtgcgttgtcggggctatcaacaactacaccg 132736



to top

>dbj|AK120005.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-A02, full
           insert sequence
          Length = 1537

 Score = 91.7 bits (46), Expect = 5e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502
           |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct: 749 gacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcac 692



 Score = 50.1 bits (25), Expect = 0.019
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 378 tgtgcgtggtcggggccatcaacaactacaccg 410
           ||||||| |||||||| ||||||||||||||||
Sbjct: 934 tgtgcgttgtcggggctatcaacaactacaccg 902



to top

>dbj|AK059608.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F03, full
           insert sequence
          Length = 1290

 Score = 91.7 bits (46), Expect = 5e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                     
Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502
           |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct: 442 gacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcac 499



 Score = 50.1 bits (25), Expect = 0.019
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 378 tgtgcgtggtcggggccatcaacaactacaccg 410
           ||||||| |||||||| ||||||||||||||||
Sbjct: 366 tgtgcgttgtcggggctatcaacaactacaccg 398



to top

>gb|AY105439.1| Zea mays PCO064225 mRNA sequence
          Length = 1193

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                     
Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502
           |||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||
Sbjct: 521 gacggagagcctgatgttcctggcacacttcgtcggcgacgtccaccagccgctgcac 578



 Score = 46.1 bits (23), Expect = 0.29
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 378 tgtgcgtggtcggggccatcaacaactacac 408
           ||||||| |||||||| ||||||||||||||
Sbjct: 448 tgtgcgtcgtcggggctatcaacaactacac 478



to top

>gb|AY108503.1| Zea mays PCO102923 mRNA sequence
          Length = 476

 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 827 gcgctgccggtcgttcagaagaggctcgctcaggggggcgtgaggctggcggcgatcctc 886
           ||||||||||| |||||||||||| |||| || || ||||| |||||||| |||||||||
Sbjct: 38  gcgctgccggtggttcagaagaggatcgcgcaaggaggcgtcaggctggccgcgatcctc 97

                   
Query: 887 aacaggat 894
           ||||||||
Sbjct: 98  aacaggat 105



to top

>dbj|AK059436.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F11, full
           insert sequence
          Length = 484

 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 194/246 (78%)
 Strand = Plus / Plus

                                                                       
Query: 662 aacatcaccgacgactggtccagtgaggagaagcagtgggaggcgtgccgcagcaaaacc 721
           |||||||| || || |||||||  |||||||||||||||||| | ||||| |||   || 
Sbjct: 11  aacatcactgatgagtggtccaccgaggagaagcagtgggagacttgccgtagccggaca 70

                                                                       
Query: 722 acgacctgcgctgagaagtacgcccaggagagcgcggtgctggcatgcgacgcgtacgag 781
           | ||| || || || ||||||||| ||||||| ||   ||| || ||| | |||||||||
Sbjct: 71  aagacttgtgccgataagtacgccgaggagagtgcaaagctcgcgtgcaaagcgtacgag 130

                                                                       
Query: 782 ggcgtcgagcaggacgacaccctaggagatgagtactacttcaaggcgctgccggtcgtt 841
           || || ||||| ||   |||| ||| |||||| || | ||||   || ||||| || |||
Sbjct: 131 ggtgttgagcaagaatccaccttagaagatgactatttcttcgctgccctgcctgttgtt 190

                                                                       
Query: 842 cagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaacaggatcttcagc 901
           ||||||||| | ||||| || ||||||||||| || || || |||||| |||||||||||
Sbjct: 191 cagaagaggattgctcaaggtggcgtgaggcttgctgcaatactcaaccggatcttcagc 250

                 
Query: 902 gggaac 907
           ||||||
Sbjct: 251 gggaac 256



to top

>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                         
Query: 445     gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502
               ||||||||||||||| |||||||| |||||| | ||||||||||| |||||| |||||
Sbjct: 1981923 gacggagagcctgatattcctggcccacttcatcggcgacgtgcaacagccgctgcac 1981866



to top

>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0004A06, complete sequence
          Length = 153510

 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                       
Query: 445   gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502
             ||||||||||||||| |||||||| |||||| | ||||||||||| |||||| |||||
Sbjct: 72652 gacggagagcctgatattcctggcccacttcatcggcgacgtgcaacagccgctgcac 72595



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                         
Query: 445     gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502
               ||||||||||||||| |||||||| |||||| | ||||||||||| |||||| |||||
Sbjct: 1981923 gacggagagcctgatattcctggcccacttcatcggcgacgtgcaacagccgctgcac 1981866



to top

>dbj|AK243128.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100029K07,
           full insert sequence
          Length = 1787

 Score = 48.1 bits (24), Expect = 0.074
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 92  ctggtggccgcggcggcgagggccccgg 119
           |||||||||||||||||| |||||||||
Sbjct: 348 ctggtggccgcggcggcgcgggccccgg 375



to top

>ref|NM_001062360.1| Oryza sativa (japonica cultivar-group) Os05g0474500 (Os05g0474500)
           mRNA, complete cds
          Length = 1533

 Score = 48.1 bits (24), Expect = 0.074
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 92  ctggtggccgcggcggcgagggccccgg 119
           |||||||||||||||||| |||||||||
Sbjct: 244 ctggtggccgcggcggcgcgggccccgg 271



to top

>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
             complete sequence
          Length = 146432

 Score = 48.1 bits (24), Expect = 0.074
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 92    ctggtggccgcggcggcgagggccccgg 119
             |||||||||||||||||| |||||||||
Sbjct: 74845 ctggtggccgcggcggcgcgggccccgg 74872



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.074
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 92       ctggtggccgcggcggcgagggccccgg 119
                |||||||||||||||||| |||||||||
Sbjct: 23143070 ctggtggccgcggcggcgcgggccccgg 23143097



 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 324      actgcaagttcagctacgccag 345
                ||||||||||||||||||||||
Sbjct: 29334286 actgcaagttcagctacgccag 29334265



to top

>gb|AE006002.1| Caulobacter crescentus CB15 section 328 of 359 of the complete genome
          Length = 14142

 Score = 46.1 bits (23), Expect = 0.29
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 101   gcggcggcgagggccccggcggc 123
             |||||||||||||||||||||||
Sbjct: 11579 gcggcggcgagggccccggcggc 11601



to top

>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
              complete sequence
          Length = 142196

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 324    actgcaagttcagctacgccag 345
              ||||||||||||||||||||||
Sbjct: 112943 actgcaagttcagctacgccag 112922



to top

>gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CIT987SK-44M2, complete sequence
          Length = 213541

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 800   accctaggagatgagtactact 821
             ||||||||||||||||||||||
Sbjct: 28395 accctaggagatgagtactact 28416



to top

>gb|AF542973.1| Triticum aestivum cyclophilin mRNA, partial cds
          Length = 806

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 100 cgcggcggcgagggccccggcg 121
           ||||||||||||||||||||||
Sbjct: 86  cgcggcggcgagggccccggcg 107



to top

>gb|AY290733.1| Triticum aestivum cyclophilin mRNA, partial sequence
          Length = 702

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 100 cgcggcggcgagggccccggcg 121
           ||||||||||||||||||||||
Sbjct: 84  cgcggcggcgagggccccggcg 105



to top

>gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, complete sequence
          Length = 93288

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 800   accctaggagatgagtactact 821
             ||||||||||||||||||||||
Sbjct: 47534 accctaggagatgagtactact 47555



to top

>dbj|AB029755.1| Paralichthys olivaceus mRNA for elastase 1 precursor, complete cds
          Length = 960

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 636 acgccatgatcgagtccatcca 657
           ||||||||||||||||||||||
Sbjct: 805 acgccatgatcgagtccatcca 784



to top

>ref|NM_001065701.1| Oryza sativa (japonica cultivar-group) Os07g0209100 (Os07g0209100)
            mRNA, complete cds
          Length = 2827

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 305  ttcgccgacacccccggcgactgca 329
            ||||||| |||||||||||||||||
Sbjct: 1275 ttcgccgtcacccccggcgactgca 1251



to top

>gb|AC188063.1| Callithrix jacchus chromosome UNK clone CH259-66H12, complete sequence
          Length = 183668

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 682   cagtgaggagaagcagtggga 702
             |||||||||||||||||||||
Sbjct: 94892 cagtgaggagaagcagtggga 94912



to top

>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 588    cggacgtgatcacgcaggccatgaaggac 616
              |||||| ||||||||||||| ||||||||
Sbjct: 534279 cggacgagatcacgcaggccgtgaaggac 534251



to top

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 861     ggggcgtgaggctggcggcgatcct 885
               ||||||||| |||||||||||||||
Sbjct: 3331346 ggggcgtgacgctggcggcgatcct 3331322



to top

>gb|AY260902.1| Rhodospirillum centenum che2 gene cluster, complete sequence
          Length = 11332

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 97   ggccgcggcggcgagggccccggcg 121
            ||||||||||||||| |||||||||
Sbjct: 1449 ggccgcggcggcgagagccccggcg 1425



to top

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 899     agcgggaacggcaggctgcagagca 923
               |||||| ||||||||||||||||||
Sbjct: 2127565 agcgggcacggcaggctgcagagca 2127589



to top

>gb|AC087900.19| Mus musculus strain C57BL/6J clone rp23-171i6 map 19, complete sequence
          Length = 195066

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 5     acaagaagaaaagcaacacaagagagaaa 33
             ||||||||||||| || ||||||||||||
Sbjct: 14831 acaagaagaaaaggaaaacaagagagaaa 14803



to top

>gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, complete sequence
          Length = 156293

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 690   agaagcagtgggaggcgtgcc 710
             |||||||||||||||||||||
Sbjct: 91598 agaagcagtgggaggcgtgcc 91578



to top

>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence
          Length = 3214944

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 932     atagaatttcgtcgaaataaa 952
               |||||||||||||||||||||
Sbjct: 1835429 atagaatttcgtcgaaataaa 1835409



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 305     ttcgccgacacccccggcgactgca 329
               ||||||| |||||||||||||||||
Sbjct: 5924436 ttcgccgtcacccccggcgactgca 5924460



to top

>gb|AC132380.6| Mus musculus BAC clone RP23-414A20 from chromosome 16, complete sequence
          Length = 198912

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 5      acaagaagaaaagcaacacaagagagaaa 33
              ||||||||||||| || ||||||||||||
Sbjct: 178806 acaagaagaaaaggaaaacaagagagaaa 178778



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 94      ggtggccgcggcggcgagggc 114
               |||||||||||||||||||||
Sbjct: 4987499 ggtggccgcggcggcgagggc 4987479



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 113    gccccggcggcgcaggcgtgg 133
              |||||||||||||||||||||
Sbjct: 869962 gccccggcggcgcaggcgtgg 869982



to top

>gb|AC097499.3| Homo sapiens BAC clone RP11-333J2 from 2, complete sequence
          Length = 193973

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 7      aagaagaaaagcaacacaaga 27
              |||||||||||||||||||||
Sbjct: 172059 aagaagaaaagcaacacaaga 172039



to top

>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_A05
          Length = 120823

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 305   ttcgccgacacccccggcgactgca 329
             ||||||| |||||||||||||||||
Sbjct: 66884 ttcgccgtcacccccggcgactgca 66908



to top

>dbj|AK120944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N02, full
            insert sequence
          Length = 2827

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 305  ttcgccgacacccccggcgactgca 329
            ||||||| |||||||||||||||||
Sbjct: 1276 ttcgccgtcacccccggcgactgca 1252



to top

>gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, complete sequence
          Length = 189238

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 690   agaagcagtgggaggcgtgcc 710
             |||||||||||||||||||||
Sbjct: 39669 agaagcagtgggaggcgtgcc 39689



to top

>gb|AY109350.1| Zea mays CL844_1 mRNA sequence
          Length = 4275

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 618 tcttcgacaaggaccaggacgccat 642
           ||||||||||||||| |||||||||
Sbjct: 656 tcttcgacaaggacctggacgccat 680



to top

>gb|AF159297.2| Zea mays pollen extensin-like protein (Pex2) gene, complete cds
          Length = 3601

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 618  tcttcgacaaggaccaggacgccat 642
            ||||||||||||||| |||||||||
Sbjct: 1065 tcttcgacaaggacctggacgccat 1089



to top

>emb|AJ000062.1|MMAJ0062 Mus musculus partial gene encoding deoxyribonuclease I and 5' UTR
          Length = 4827

 Score = 42.1 bits (21), Expect = 4.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 5    acaagaagaaaagcaacacaagagagaaa 33
            ||||||||||||| || ||||||||||||
Sbjct: 1616 acaagaagaaaaggaaaacaagagagaaa 1644


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 175,935,791
Number of extensions: 9230830
Number of successful extensions: 214589
Number of sequences better than 10.0: 50
Number of HSP's gapped: 214580
Number of HSP's successfully gapped: 74
Length of query: 1197
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1174
Effective length of database: 18,503,978,556
Effective search space: 21723670824744
Effective search space used: 21723670824744
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top