| Clone Name | FLbaf38f09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D83178.1| Hordeum vulgare mRNA for endonuclease, complete cds Length = 1180 Score = 2123 bits (1071), Expect = 0.0 Identities = 1149/1175 (97%) Strand = Plus / Plus Query: 8 agaagaaaagcaacacaagagagaaatagagagccaagcttgagctaagctaggatgggg 67 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaaggaaagcaacacaagagagaaatagagagccaagcttgagctaagctaggatgggg 60 Query: 68 ttgctcctgctgcttcaggtcctcctggtggccgcggcggcgagggccccggcggcgcag 127 ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 61 ttgctcctgctgcttcaggtcctactggtggccgcggcggcgagggccccgggggcgcag 120 Query: 128 gcgtggggcaaggagggacactacatgacctgcaagatcgccgacggtttcctgacgagc 187 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgtggggcaaggagggccactacatgacctgcaagatcgccgacggtttcctgacgagc 180 Query: 188 gaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaacggcgagctcgcggag 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaacggcgagctcgcggag 240 Query: 248 gtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcccgctccctgcacttc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcccgctccctgcacttc 300 Query: 308 gccgacacccccggcgactgcaagttcagctacgccagggactgccacgacaccaagggg 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccgacacccccggcgactgcaagttcagctacgccagggactgccacgacaccaagggg 360 Query: 368 aacaagaacgtgtgcgtggtcggggccatcaacaactacaccgccgcgctccaggactcg 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aacaagaacgtgtgcgtggtcggggccatcaacaactacaccgccgcgctccaggactcg 420 Query: 428 tccagcccatttgacccgacggagagcctgatgttcctggcgcacttcgtgggcgacgtg 487 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tccagcccatttaacccgacggagagcctgatgttcctggcgcacttcgtgggcgacgtg 480 Query: 488 caccagccgatgcactgcggccacgtcgacgacctcggcggcaacaccatcaaactccga 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 caccagccgatgcactgcggccacgtcgacgacctcggcggcaacaccatcaaactccga 540 Query: 548 tggtacaggaggaagagcaacctgcaccacgtgtgggactcggacgtgatcacgcaggcc 607 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 541 tggtacaggaggaagagcaacctgcaccacgtgtgggactcggacgtgatcacgcagacc 600 Query: 608 atgaaggacttcttcgacaaggaccaggacgccatgatcgagtccatccagcgcaacatc 667 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 atgaaggacttcttcgacaaggaccaggacgccatgatcgagtccatccagcgcaacatc 660 Query: 668 accgacgactggtccagtgaggagaagcagtgggaggcgtgccgcagcaaaaccacgacc 727 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 661 accgacgactggtccagtgaggagaagcagtgggagacgtgccgcagcaaaaccacgacc 720 Query: 728 tgcgctgagaagtacgcccaggagagcgcggtgctggcatgcgacgcgtacgagggcgtc 787 ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 721 tgcgccgaaaagtacgcccaggagagcgcggtgctggcatgcgacgcctacgagggcgtc 780 Query: 788 gagcaggacgacaccctaggagatgagtactacttcaaggcgctgccggtcgttcagaag 847 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 781 gagcaggacgacaccctaggagatgagtactacttcaaagcgctgccggtcgttcagaag 840 Query: 848 aggctcgctcaggggggcgtgaggctggcggcgatcctcaacaggatcttcagcgggaac 907 |||||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 841 aggctcgcccaggggggcttgaggctggcggccatcctcaaccggatcttcagcgggaac 900 Query: 908 ggcaggctgcagagcatctgatcgatagaatttcgtcgaaataaagggagaacaatgtat 967 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 901 ggcaggctgcagagcatctgatcgatactatttcgtcgaaataaagggagaacaatgtat 960 Query: 968 aataagatcatcctgtctgaccaacgttgtagcttcgccaaaatcacctaattcgagatt 1027 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 961 aataagatcatcctgtctgaccaacgttatagcttcgccaaaatcacctaattcgagatt 1020 Query: 1028 agatttgttatccatccaccaaaacggctttagattcgctgctgcaggaaacctttctat 1087 | |||| |||||||| ||||||| |||| |||||||||||||||||||||| |||| ||| Sbjct: 1021 aaatttcttatccattcaccaaagcggccttagattcgctgctgcaggaaatctttgtat 1080 Query: 1088 ctacacgtactgccgcagcaaatcattgtacctatatgtacgtacgtgtaaggcgatgta 1147 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1081 ctacacgtactgccgcagcaaatcattgtacctatatgtacgtacgtgtaaggcaatgta 1140 Query: 1148 ttgttgattgacacaattgtgtcattttcatttcc 1182 ||||||||||||||||||||||||||||||||||| Sbjct: 1141 ttgttgattgacacaattgtgtcattttcatttcc 1175
>dbj|AB028448.1| Hordeum vulgare Bnuc1 mRNA for nuclease I, complete cds Length = 1283 Score = 1053 bits (531), Expect = 0.0 Identities = 790/875 (90%), Gaps = 6/875 (0%) Strand = Plus / Plus Query: 61 gatggggttgctcctgctgcttcaggtcctcctggtggccgcggcggcgagggccccggc 120 ||||||| |||| |||||||||||||| ||||||| || | |||||| || ||||| Sbjct: 82 gatggggctgctgctgctgcttcaggtgctcctggccgcgatcgtggcgagagcgccggc 141 Query: 121 ggcgcaggcgtggggcaaggagggacactacatgacctgcaagatcgccgacggtttcct 180 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 142 ggcgcaggcgtggggcaaggaggggcactacatgacctgcaagatcgccgatggtttcct 201 Query: 181 gacgagcgaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaacggcgagct 240 |||||||||||| | | ||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 202 gacgagcgaggcatcggcggcggtgaaggacctcctgccgtcgtgggccaacggcgagct 261 Query: 241 cgcggaggtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcccgctccct 300 ||||||||||||| ||||||||||||| ||||||||||||||||||||||| | |||| Sbjct: 262 cgcggaggtgtgcgcgtgggcggacaggcagcgcttccggtaccggtggtcaagtcccct 321 Query: 301 gcacttcgccgacacccccggcgactgcaagttcagctacgccagggactgccacgacac 360 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 322 gcacttcgccgacacccccggtgactgcaacttcagctacgccagggactgccacgacac 381 Query: 361 caaggggaacaagaacgtgtgcgtggtcggggccatcaacaactacaccgccgcgctcca 420 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||| | Sbjct: 382 caaggggaacaaggacgtgtgcgtggtgggagccatcaacaactacaccgccgcgctcga 441 Query: 421 ggactcgtccagcccatttgacccgacggagagcctgatgttcctggcgcacttcgtggg 480 |||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 ggacccgtccagcccgtatgacccgacggagagcctgatgttcctggcgcacttcgtggg 501 Query: 481 cgacgtgcaccagccgatgcactgcggccacgtcgacgacctcggcggcaacaccatcaa 540 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 cgacgtgcaccagccactgcactgcggccacgtcgacgacctcggcggcaacaccatcaa 561 Query: 541 actccgatggtacaggaggaagagcaacctgcaccacgtgtgggactcggacgtgatcac 600 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 562 actccgatggtacaggaggaagagcaacctgcaccacgtgtgggattcggacgtgatcac 621 Query: 601 gcaggccatgaaggacttcttcgacaaggaccaggacgccatgatcgagtccatccagcg 660 ||||||||||||||||| ||| ||| |||||||||| ||||||||||| |||||||||| Sbjct: 622 acaggccatgaaggactttttcaacagggaccaggacaccatgatcgaggccatccagcg 681 Query: 661 caacatcaccgacgactggtccagtgaggagaagcagtgggaggcgtgccgcagcaaaac 720 |||||||||||| ||||||||||| ||||||||||| |||||||||||| |||||| ||| Sbjct: 682 caacatcaccgatgactggtccagcgaggagaagcaatgggaggcgtgcggcagcagaac 741 Query: 721 cacga---cctgcgctgagaagtacgcccaggagagcgcggtgctggcatgcgacgcgta 777 || || ||||||| || ||||||||| |||||||||| ||||||| ||||||||||| Sbjct: 742 caagatcacctgcgccgaaaagtacgccaaggagagcgcattgctggcctgcgacgcgta 801 Query: 778 cgagggcgtcgagcaggacgacaccctaggagatgagtactacttcaaggcgctgccggt 837 ||||||||||||||| | ||||||| ||||||| || || |||||| |||| ||||||| Sbjct: 802 cgagggcgtcgagcaaggcgacaccttaggagacgactattacttccgggcgttgccggt 861 Query: 838 cgttcagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaacaggatctt 897 || |||||||| | |||||||| |||||||||||||||| |||||| ||| |||||| Sbjct: 862 tgtcgagaagaggatagctcagggaggcgtgaggctggcggtgatccttaaccagatctt 921 Query: 898 cagcgggaacg---gcaggctgcagagcatctgat 929 ||| ||||| ||||||||||||||||||||| Sbjct: 922 cagtgggaagaatagcaggctgcagagcatctgat 956
>emb|AJ311603.1|HVU311603 Hordeum vulgare mRNA for putative nuclease (bnuc2 gene) Length = 1139 Score = 995 bits (502), Expect = 0.0 Identities = 808/908 (88%), Gaps = 4/908 (0%) Strand = Plus / Plus Query: 61 gatggggttgctcctgctgcttcaggtcctcctggtggccgcggcggcgagggccccggc 120 |||||| ||||| |||||||| || ||| ||||||| || ||||||||| | ||||| || Sbjct: 61 gatgggcttgctgctgctgctccacgtcgtcctggtcgcggcggcggcgggagccccagc 120 Query: 121 ggcgcaggcgtggggcaaggagggacactacatgacctgcaagatcgccgacggtttcct 180 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 121 ggcgcaggcgtggggcaaggaggggcactacatgacctgcaagatcgccgatggtttcct 180 Query: 181 gacgagcgaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaacggcgagct 240 ||||| ||||||| | |||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 181 gacgaaggaggcgtcggcgggggtgaaggatctcctcccgtcgtcggccaacggcgagct 240 Query: 241 cgcggaggtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcccgctccct 300 |||||||||||||||||||||||| |||||||||||||||||||||||||| || | || Sbjct: 241 cgcggaggtgtgctcgtgggcggatagccagcgcttccggtaccggtggtcgagcccgct 300 Query: 301 gcacttcgccgacacccccggcgactgcaagttcagctacgccagggactgccacgacac 360 ||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 301 gcacttcgctgacaccccaaaagactgcaagttcagctacgcccgggactgccacgacac 360 Query: 361 caaggggaacaagaacgtgtgcgtggtcggggccatcaacaactacaccgccgcgctcca 420 ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||| || || Sbjct: 361 caaggggaacaaggacgcgtgcgtggtcggggccattaacaactacaccgccgccctgca 420 Query: 421 ggactcgtccagcccatttgacccgacggagagcctgatgttcctggcgcacttcgtggg 480 |||| | || | || | | | | |||||||||||||||||||||||| |||||||| || Sbjct: 421 ggacccatctaatccgtataatcggacggagagcctgatgttcctggcccacttcgtcgg 480 Query: 481 cgacgtgcaccagccgatgcactgcggccacgtcgacgacctcggcggcaacaccatcaa 540 |||||||||||||||| |||||||||||| ||| || ||||||||||||||||||||| Sbjct: 481 cgacgtgcaccagccgctgcactgcggccgcgtggaagacctcggcggcaacaccatcct 540 Query: 541 actccgatggtacaggaggaagagcaacctgcaccacgtgtgggactcggacgtgatcac 600 |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 541 cgtccgctggtacaggaggaagagcaacctgcaccacgtgtgggacgtggacgtcatcga 600 Query: 601 gcaggccatgaaggacttcttcgacaaggaccaggacgccatgatcgagtccatccagcg 660 |||||||||||||||||| | || || ||||||||| |||||||| || |||||||||| Sbjct: 601 gcaggccatgaaggacttgtacggcagagaccaggacaccatgatcaaggccatccagcg 660 Query: 661 caacatcaccgacgactggtccagtgaggagaagcagtgggaggcgtgccgcagcaaaac 720 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 661 taacatcaccgaggactggtccagcgaggagaagcagtgggaggcgtgccgcagcagaac 720 Query: 721 cacgacctgcgctgagaagtacgcccaggagagcgcggtgctggcatgcgacgcgtacga 780 || |||||||||||| |||||||| ||||||| || |||||||| |||||||||||| | Sbjct: 721 caagacctgcgctgacaagtacgctgaggagagtgcagtgctggcctgcgacgcgtacaa 780 Query: 781 gggcgtcgagcaggacgacaccctaggagatgagtactacttcaaggcgctgccggtcgt 840 ||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 781 gggcgtcaagcaggactccaccttaggagatgagtactacttcaaggcgctgccggtcgt 840 Query: 841 tcagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaacaggatcttcag 900 ||||||| || |||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 841 tcagaagcggatcgctcagggcggcgtcaggctggcggcgatcctcaaccggatcttcag 900 Query: 901 cgg---gaacggcaggctgcagagcatctgatcgatagaatttcgtcgaaataaagggag 957 ||| |||||||| ||||||||||||||||||| | |||||| |||||||||||| || Sbjct: 901 cgggaagaacggcaagctgcagagcatctgatcg-tgcaatttcatcgaaataaaggaag 959 Query: 958 aacaatgt 965 || ||||| Sbjct: 960 aagaatgt 967 Score = 46.1 bits (23), Expect = 0.29 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1104 agcaaatcattgtacctatatgtacgtacgtgtaaggcgatgtattg 1150 |||||||||||||| || |||| ||||| ||||| || ||||||||| Sbjct: 1066 agcaaatcattgtatctgtatgaacgtaagtgtatggtgatgtattg 1112
>dbj|AK106059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F11, full insert sequence Length = 1146 Score = 333 bits (168), Expect = 9e-88 Identities = 402/480 (83%) Strand = Plus / Plus Query: 106 ggcgagggccccggcggcgcaggcgtggggcaaggagggacactacatgacctgcaagat 165 |||||| ||||| |||| || ||||||||||||||||| ||||||||| |||||||| Sbjct: 80 ggcgagagcccccacggcccacgcgtggggcaaggagggccactacatggtgtgcaagat 139 Query: 166 cgccgacggtttcctgacgagcgaggcgttgacgggggtgaaggcgctcctcccgtcgtg 225 |||||| ||||||||||||| |||||| ||||| |||||||| ||||||||| ||| Sbjct: 140 cgccgagggtttcctgacgaaggaggcggcgacggcggtgaaggagctcctccccgggtg 199 Query: 226 ggccaacggcgagctcgcggaggtgtgctcgtgggcggacagccagcgcttccggtaccg 285 |||| ||||||||||||||| ||||||||||||||||| | |||| ||||||||||| Sbjct: 200 ggccggcggcgagctcgcggaaacgtgctcgtgggcggacaccgagcggttccggtaccg 259 Query: 286 gtggtcccgctccctgcacttcgccgacacccccggcgactgcaagttcagctacgccag 345 |||||| || |||| ||||||||||||||||||||||||||| |||||| ||||||| | Sbjct: 260 gtggtcgagccccctccacttcgccgacacccccggcgactgccagttcaactacgcccg 319 Query: 346 ggactgccacgacaccaaggggaacaagaacgtgtgcgtggtcggggccatcaacaacta 405 ||| |||||| |||| || || | ||| || |||| |||||||| || ||||||||||| Sbjct: 320 ggattgccacaacacaaacggtgagaaggacatgtgtgtggtcggagcgatcaacaacta 379 Query: 406 caccgccgcgctccaggactcgtccagcccatttgacccgacggagagcctgatgttcct 465 |||| ||||||| ||||||| || || |||| ||| || || |||||| |||||||| | Sbjct: 380 caccaacgcgctcgaggactcatcaagtccatatgatccaaccgagagcttgatgttctt 439 Query: 466 ggcgcacttcgtgggcgacgtgcaccagccgatgcactgcggccacgtcgacgacctcgg 525 ||| |||||||| |||||||| |||||||| | ||||||||||||||| | || || || Sbjct: 440 ggcacacttcgtcggcgacgttcaccagcctctccactgcggccacgtcaaagatcttgg 499 Query: 526 cggcaacaccatcaaactccgatggtacaggaggaagagcaacctgcaccacgtgtggga 585 ||||||||||||| ||| ||||||| |||||||||||||| || ||||||||||| Sbjct: 500 tggcaacaccatcatcgtccattggtacacaaggaagagcaaccttcatcacgtgtggga 559 Score = 67.9 bits (34), Expect = 8e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 830 ctgccggtcgttcagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaac 889 ||||| || |||||||||||| | ||||| || ||||||||||| || || || |||||| Sbjct: 804 ctgcctgttgttcagaagaggattgctcaaggtggcgtgaggcttgctgcaatactcaac 863 Query: 890 aggatcttcagcgggaac 907 ||||||||||||||||| Sbjct: 864 cggatcttcagcgggaac 881
>ref|NM_001060636.1| Oryza sativa (japonica cultivar-group) Os04g0652700 (Os04g0652700) mRNA, complete cds Length = 1146 Score = 329 bits (166), Expect = 1e-86 Identities = 385/458 (84%) Strand = Plus / Plus Query: 128 gcgtggggcaaggagggacactacatgacctgcaagatcgccgacggtttcctgacgagc 187 ||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 102 gcgtggggcaaggagggccactacatggtgtgcaagatcgccgagggtttcctgacgaag 161 Query: 188 gaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaacggcgagctcgcggag 247 |||||| ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 162 gaggcggcgacggcggtgaaggagctcctccccgggtgggccggcggcgagctcgcggaa 221 Query: 248 gtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcccgctccctgcacttc 307 ||||||||||||||||| | |||| ||||||||||||||||| || |||| |||||| Sbjct: 222 acgtgctcgtgggcggacaccgagcggttccggtaccggtggtcgagccccctccacttc 281 Query: 308 gccgacacccccggcgactgcaagttcagctacgccagggactgccacgacaccaagggg 367 ||||||||||||||||||||| |||||| ||||||| |||| |||||| |||| || || Sbjct: 282 gccgacacccccggcgactgccagttcaactacgcccgggattgccacaacacaaacggt 341 Query: 368 aacaagaacgtgtgcgtggtcggggccatcaacaactacaccgccgcgctccaggactcg 427 | ||| || |||| |||||||| || ||||||||||||||| ||||||| ||||||| Sbjct: 342 gagaaggacatgtgtgtggtcggagcgatcaacaactacaccaacgcgctcgaggactca 401 Query: 428 tccagcccatttgacccgacggagagcctgatgttcctggcgcacttcgtgggcgacgtg 487 || || |||| ||| || || |||||| |||||||| |||| |||||||| |||||||| Sbjct: 402 tcaagtccatatgatccaaccgagagcttgatgttcttggcacacttcgtcggcgacgtt 461 Query: 488 caccagccgatgcactgcggccacgtcgacgacctcggcggcaacaccatcaaactccga 547 |||||||| | ||||||||||||||| | || || || ||||||||||||| ||| Sbjct: 462 caccagcctctccactgcggccacgtcaaagatcttggtggcaacaccatcatcgtccat 521 Query: 548 tggtacaggaggaagagcaacctgcaccacgtgtggga 585 ||||||| |||||||||||||| || ||||||||||| Sbjct: 522 tggtacacaaggaagagcaaccttcatcacgtgtggga 559 Score = 75.8 bits (38), Expect = 3e-10 Identities = 194/246 (78%) Strand = Plus / Plus Query: 662 aacatcaccgacgactggtccagtgaggagaagcagtgggaggcgtgccgcagcaaaacc 721 |||||||| || || ||||||| |||||||||||||||||| | ||||| ||| || Sbjct: 636 aacatcactgatgagtggtccaccgaggagaagcagtgggagacttgccgtagccggaca 695 Query: 722 acgacctgcgctgagaagtacgcccaggagagcgcggtgctggcatgcgacgcgtacgag 781 | ||| || || || ||||||||| ||||||| || ||| || ||| | ||||||||| Sbjct: 696 aagacttgtgccgataagtacgccgaggagagtgcaaagctcgcgtgcaaagcgtacgag 755 Query: 782 ggcgtcgagcaggacgacaccctaggagatgagtactacttcaaggcgctgccggtcgtt 841 || || ||||| || |||| ||| |||||| || | |||| || ||||| || ||| Sbjct: 756 ggtgttgagcaagaatccaccttagaagatgactatttcttcgctgccctgcctgttgtt 815 Query: 842 cagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaacaggatcttcagc 901 ||||||||| | ||||| || ||||||||||| || || || |||||| ||||||||||| Sbjct: 816 cagaagaggattgctcaaggtggcgtgaggcttgctgcaatactcaaccggatcttcagc 875 Query: 902 gggaac 907 |||||| Sbjct: 876 gggaac 881
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 157 bits (79), Expect = 1e-34 Identities = 148/171 (86%) Strand = Plus / Plus Query: 173 ggtttcctgacgagcgaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaac 232 ||||||||||||| |||||| ||||| |||||||| ||||||||| ||||||| | Sbjct: 33288049 ggtttcctgacgaaggaggcggcgacggcggtgaaggagctcctccccgggtgggccggc 33288108 Query: 233 ggcgagctcgcggaggtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcc 292 |||||||||||||| ||||||||||||||||| | |||| ||||||||||||||||| Sbjct: 33288109 ggcgagctcgcggaaacgtgctcgtgggcggacaccgagcggttccggtaccggtggtcg 33288168 Query: 293 cgctccctgcacttcgccgacacccccggcgactgcaagttcagctacgcc 343 || |||| ||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 33288169 agccccctccacttcgccgacacccccggcgactgccagttcaactacgcc 33288219 Score = 85.7 bits (43), Expect = 3e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 449 gagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcactgcggc 508 |||||| |||||||| |||| |||||||| |||||||| |||||||| | ||||||||| Sbjct: 33289343 gagagcttgatgttcttggcacacttcgtcggcgacgttcaccagcctctccactgcggc 33289402 Query: 509 cacgtcgacgacctcggcggcaacaccatcaaactccgatggtacaggaggaagagcaac 568 |||||| | || || || ||||||||||||| ||| ||||||| |||||||||||| Sbjct: 33289403 cacgtcaaagatcttggtggcaacaccatcatcgtccattggtacacaaggaagagcaac 33289462 Query: 569 ctgcaccacgt 579 || || ||||| Sbjct: 33289463 cttcatcacgt 33289473 Score = 67.9 bits (34), Expect = 8e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 830 ctgccggtcgttcagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaac 889 ||||| || |||||||||||| | ||||| || ||||||||||| || || || |||||| Sbjct: 33290128 ctgcctgttgttcagaagaggattgctcaaggtggcgtgaggcttgctgcaatactcaac 33290187 Query: 890 aggatcttcagcgggaac 907 ||||||||||||||||| Sbjct: 33290188 cggatcttcagcgggaac 33290205 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 128 gcgtggggcaaggagggacactacatgacctgcaagatcgccga 171 ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 33287919 gcgtggggcaaggagggccactacatggtgtgcaagatcgccga 33287962 Score = 50.1 bits (25), Expect = 0.019 Identities = 43/49 (87%) Strand = Plus / Plus Query: 378 tgtgcgtggtcggggccatcaacaactacaccgccgcgctccaggactc 426 |||| |||||||| || ||||||||||||||| ||||||| ||||||| Sbjct: 33289166 tgtgtgtggtcggagcgatcaacaactacaccaacgcgctcgaggactc 33289214
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 157 bits (79), Expect = 1e-34 Identities = 148/171 (86%) Strand = Plus / Plus Query: 173 ggtttcctgacgagcgaggcgttgacgggggtgaaggcgctcctcccgtcgtgggccaac 232 ||||||||||||| |||||| ||||| |||||||| ||||||||| ||||||| | Sbjct: 60310 ggtttcctgacgaaggaggcggcgacggcggtgaaggagctcctccccgggtgggccggc 60369 Query: 233 ggcgagctcgcggaggtgtgctcgtgggcggacagccagcgcttccggtaccggtggtcc 292 |||||||||||||| ||||||||||||||||| | |||| ||||||||||||||||| Sbjct: 60370 ggcgagctcgcggaaacgtgctcgtgggcggacaccgagcggttccggtaccggtggtcg 60429 Query: 293 cgctccctgcacttcgccgacacccccggcgactgcaagttcagctacgcc 343 || |||| ||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 60430 agccccctccacttcgccgacacccccggcgactgccagttcaactacgcc 60480 Score = 85.7 bits (43), Expect = 3e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 449 gagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcactgcggc 508 |||||| |||||||| |||| |||||||| |||||||| |||||||| | ||||||||| Sbjct: 61604 gagagcttgatgttcttggcacacttcgtcggcgacgttcaccagcctctccactgcggc 61663 Query: 509 cacgtcgacgacctcggcggcaacaccatcaaactccgatggtacaggaggaagagcaac 568 |||||| | || || || ||||||||||||| ||| ||||||| |||||||||||| Sbjct: 61664 cacgtcaaagatcttggtggcaacaccatcatcgtccattggtacacaaggaagagcaac 61723 Query: 569 ctgcaccacgt 579 || || ||||| Sbjct: 61724 cttcatcacgt 61734 Score = 67.9 bits (34), Expect = 8e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 830 ctgccggtcgttcagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaac 889 ||||| || |||||||||||| | ||||| || ||||||||||| || || || |||||| Sbjct: 62389 ctgcctgttgttcagaagaggattgctcaaggtggcgtgaggcttgctgcaatactcaac 62448 Query: 890 aggatcttcagcgggaac 907 ||||||||||||||||| Sbjct: 62449 cggatcttcagcgggaac 62466 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 128 gcgtggggcaaggagggacactacatgacctgcaagatcgccga 171 ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 60180 gcgtggggcaaggagggccactacatggtgtgcaagatcgccga 60223 Score = 50.1 bits (25), Expect = 0.019 Identities = 43/49 (87%) Strand = Plus / Plus Query: 378 tgtgcgtggtcggggccatcaacaactacaccgccgcgctccaggactc 426 |||| |||||||| || ||||||||||||||| ||||||| ||||||| Sbjct: 61427 tgtgtgtggtcggagcgatcaacaactacaccaacgcgctcgaggactc 61475
>ref|NM_001048445.1| Oryza sativa (japonica cultivar-group) Os01g0128200 (Os01g0128200) mRNA, complete cds Length = 1290 Score = 91.7 bits (46), Expect = 5e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502 |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 442 gacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcac 499 Score = 50.1 bits (25), Expect = 0.019 Identities = 31/33 (93%) Strand = Plus / Plus Query: 378 tgtgcgtggtcggggccatcaacaactacaccg 410 ||||||| |||||||| |||||||||||||||| Sbjct: 366 tgtgcgttgtcggggctatcaacaactacaccg 398
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 91.7 bits (46), Expect = 5e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502 |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 1567241 gacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcac 1567298 Score = 50.1 bits (25), Expect = 0.019 Identities = 31/33 (93%) Strand = Plus / Plus Query: 378 tgtgcgtggtcggggccatcaacaactacaccg 410 ||||||| |||||||| |||||||||||||||| Sbjct: 1567056 tgtgcgttgtcggggctatcaacaactacaccg 1567088
>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408F06 Length = 137462 Score = 91.7 bits (46), Expect = 5e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502 |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 4472 gacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcac 4529 Score = 50.1 bits (25), Expect = 0.019 Identities = 31/33 (93%) Strand = Plus / Plus Query: 378 tgtgcgtggtcggggccatcaacaactacaccg 410 ||||||| |||||||| |||||||||||||||| Sbjct: 4287 tgtgcgttgtcggggctatcaacaactacaccg 4319
>dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0409B08 Length = 134673 Score = 91.7 bits (46), Expect = 5e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502 |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 132889 gacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcac 132946 Score = 50.1 bits (25), Expect = 0.019 Identities = 31/33 (93%) Strand = Plus / Plus Query: 378 tgtgcgtggtcggggccatcaacaactacaccg 410 ||||||| |||||||| |||||||||||||||| Sbjct: 132704 tgtgcgttgtcggggctatcaacaactacaccg 132736
>dbj|AK120005.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-A02, full insert sequence Length = 1537 Score = 91.7 bits (46), Expect = 5e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502 |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 749 gacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcac 692 Score = 50.1 bits (25), Expect = 0.019 Identities = 31/33 (93%) Strand = Plus / Minus Query: 378 tgtgcgtggtcggggccatcaacaactacaccg 410 ||||||| |||||||| |||||||||||||||| Sbjct: 934 tgtgcgttgtcggggctatcaacaactacaccg 902
>dbj|AK059608.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F03, full insert sequence Length = 1290 Score = 91.7 bits (46), Expect = 5e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502 |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 442 gacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcac 499 Score = 50.1 bits (25), Expect = 0.019 Identities = 31/33 (93%) Strand = Plus / Plus Query: 378 tgtgcgtggtcggggccatcaacaactacaccg 410 ||||||| |||||||| |||||||||||||||| Sbjct: 366 tgtgcgttgtcggggctatcaacaactacaccg 398
>gb|AY105439.1| Zea mays PCO064225 mRNA sequence Length = 1193 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502 |||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||| Sbjct: 521 gacggagagcctgatgttcctggcacacttcgtcggcgacgtccaccagccgctgcac 578 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 378 tgtgcgtggtcggggccatcaacaactacac 408 ||||||| |||||||| |||||||||||||| Sbjct: 448 tgtgcgtcgtcggggctatcaacaactacac 478
>gb|AY108503.1| Zea mays PCO102923 mRNA sequence Length = 476 Score = 79.8 bits (40), Expect = 2e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 827 gcgctgccggtcgttcagaagaggctcgctcaggggggcgtgaggctggcggcgatcctc 886 ||||||||||| |||||||||||| |||| || || ||||| |||||||| ||||||||| Sbjct: 38 gcgctgccggtggttcagaagaggatcgcgcaaggaggcgtcaggctggccgcgatcctc 97 Query: 887 aacaggat 894 |||||||| Sbjct: 98 aacaggat 105
>dbj|AK059436.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F11, full insert sequence Length = 484 Score = 75.8 bits (38), Expect = 3e-10 Identities = 194/246 (78%) Strand = Plus / Plus Query: 662 aacatcaccgacgactggtccagtgaggagaagcagtgggaggcgtgccgcagcaaaacc 721 |||||||| || || ||||||| |||||||||||||||||| | ||||| ||| || Sbjct: 11 aacatcactgatgagtggtccaccgaggagaagcagtgggagacttgccgtagccggaca 70 Query: 722 acgacctgcgctgagaagtacgcccaggagagcgcggtgctggcatgcgacgcgtacgag 781 | ||| || || || ||||||||| ||||||| || ||| || ||| | ||||||||| Sbjct: 71 aagacttgtgccgataagtacgccgaggagagtgcaaagctcgcgtgcaaagcgtacgag 130 Query: 782 ggcgtcgagcaggacgacaccctaggagatgagtactacttcaaggcgctgccggtcgtt 841 || || ||||| || |||| ||| |||||| || | |||| || ||||| || ||| Sbjct: 131 ggtgttgagcaagaatccaccttagaagatgactatttcttcgctgccctgcctgttgtt 190 Query: 842 cagaagaggctcgctcaggggggcgtgaggctggcggcgatcctcaacaggatcttcagc 901 ||||||||| | ||||| || ||||||||||| || || || |||||| ||||||||||| Sbjct: 191 cagaagaggattgctcaaggtggcgtgaggcttgctgcaatactcaaccggatcttcagc 250 Query: 902 gggaac 907 |||||| Sbjct: 251 gggaac 256
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 67.9 bits (34), Expect = 8e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502 ||||||||||||||| |||||||| |||||| | ||||||||||| |||||| ||||| Sbjct: 1981923 gacggagagcctgatattcctggcccacttcatcggcgacgtgcaacagccgctgcac 1981866
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 67.9 bits (34), Expect = 8e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502 ||||||||||||||| |||||||| |||||| | ||||||||||| |||||| ||||| Sbjct: 72652 gacggagagcctgatattcctggcccacttcatcggcgacgtgcaacagccgctgcac 72595
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 67.9 bits (34), Expect = 8e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 445 gacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcaccagccgatgcac 502 ||||||||||||||| |||||||| |||||| | ||||||||||| |||||| ||||| Sbjct: 1981923 gacggagagcctgatattcctggcccacttcatcggcgacgtgcaacagccgctgcac 1981866
>dbj|AK243128.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100029K07, full insert sequence Length = 1787 Score = 48.1 bits (24), Expect = 0.074 Identities = 27/28 (96%) Strand = Plus / Plus Query: 92 ctggtggccgcggcggcgagggccccgg 119 |||||||||||||||||| ||||||||| Sbjct: 348 ctggtggccgcggcggcgcgggccccgg 375
>ref|NM_001062360.1| Oryza sativa (japonica cultivar-group) Os05g0474500 (Os05g0474500) mRNA, complete cds Length = 1533 Score = 48.1 bits (24), Expect = 0.074 Identities = 27/28 (96%) Strand = Plus / Plus Query: 92 ctggtggccgcggcggcgagggccccgg 119 |||||||||||||||||| ||||||||| Sbjct: 244 ctggtggccgcggcggcgcgggccccgg 271
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 48.1 bits (24), Expect = 0.074 Identities = 27/28 (96%) Strand = Plus / Plus Query: 92 ctggtggccgcggcggcgagggccccgg 119 |||||||||||||||||| ||||||||| Sbjct: 74845 ctggtggccgcggcggcgcgggccccgg 74872
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 48.1 bits (24), Expect = 0.074 Identities = 27/28 (96%) Strand = Plus / Plus Query: 92 ctggtggccgcggcggcgagggccccgg 119 |||||||||||||||||| ||||||||| Sbjct: 23143070 ctggtggccgcggcggcgcgggccccgg 23143097 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 324 actgcaagttcagctacgccag 345 |||||||||||||||||||||| Sbjct: 29334286 actgcaagttcagctacgccag 29334265
>gb|AE006002.1| Caulobacter crescentus CB15 section 328 of 359 of the complete genome Length = 14142 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 101 gcggcggcgagggccccggcggc 123 ||||||||||||||||||||||| Sbjct: 11579 gcggcggcgagggccccggcggc 11601
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 324 actgcaagttcagctacgccag 345 |||||||||||||||||||||| Sbjct: 112943 actgcaagttcagctacgccag 112922
>gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CIT987SK-44M2, complete sequence Length = 213541 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 800 accctaggagatgagtactact 821 |||||||||||||||||||||| Sbjct: 28395 accctaggagatgagtactact 28416
>gb|AF542973.1| Triticum aestivum cyclophilin mRNA, partial cds Length = 806 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 100 cgcggcggcgagggccccggcg 121 |||||||||||||||||||||| Sbjct: 86 cgcggcggcgagggccccggcg 107
>gb|AY290733.1| Triticum aestivum cyclophilin mRNA, partial sequence Length = 702 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 100 cgcggcggcgagggccccggcg 121 |||||||||||||||||||||| Sbjct: 84 cgcggcggcgagggccccggcg 105
>gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, complete sequence Length = 93288 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 800 accctaggagatgagtactact 821 |||||||||||||||||||||| Sbjct: 47534 accctaggagatgagtactact 47555
>dbj|AB029755.1| Paralichthys olivaceus mRNA for elastase 1 precursor, complete cds Length = 960 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 636 acgccatgatcgagtccatcca 657 |||||||||||||||||||||| Sbjct: 805 acgccatgatcgagtccatcca 784
>ref|NM_001065701.1| Oryza sativa (japonica cultivar-group) Os07g0209100 (Os07g0209100) mRNA, complete cds Length = 2827 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ttcgccgacacccccggcgactgca 329 ||||||| ||||||||||||||||| Sbjct: 1275 ttcgccgtcacccccggcgactgca 1251
>gb|AC188063.1| Callithrix jacchus chromosome UNK clone CH259-66H12, complete sequence Length = 183668 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 682 cagtgaggagaagcagtggga 702 ||||||||||||||||||||| Sbjct: 94892 cagtgaggagaagcagtggga 94912
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 588 cggacgtgatcacgcaggccatgaaggac 616 |||||| ||||||||||||| |||||||| Sbjct: 534279 cggacgagatcacgcaggccgtgaaggac 534251
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 861 ggggcgtgaggctggcggcgatcct 885 ||||||||| ||||||||||||||| Sbjct: 3331346 ggggcgtgacgctggcggcgatcct 3331322
>gb|AY260902.1| Rhodospirillum centenum che2 gene cluster, complete sequence Length = 11332 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 ggccgcggcggcgagggccccggcg 121 ||||||||||||||| ||||||||| Sbjct: 1449 ggccgcggcggcgagagccccggcg 1425
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 899 agcgggaacggcaggctgcagagca 923 |||||| |||||||||||||||||| Sbjct: 2127565 agcgggcacggcaggctgcagagca 2127589
>gb|AC087900.19| Mus musculus strain C57BL/6J clone rp23-171i6 map 19, complete sequence Length = 195066 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 5 acaagaagaaaagcaacacaagagagaaa 33 ||||||||||||| || |||||||||||| Sbjct: 14831 acaagaagaaaaggaaaacaagagagaaa 14803
>gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, complete sequence Length = 156293 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 690 agaagcagtgggaggcgtgcc 710 ||||||||||||||||||||| Sbjct: 91598 agaagcagtgggaggcgtgcc 91578
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 932 atagaatttcgtcgaaataaa 952 ||||||||||||||||||||| Sbjct: 1835429 atagaatttcgtcgaaataaa 1835409
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 ttcgccgacacccccggcgactgca 329 ||||||| ||||||||||||||||| Sbjct: 5924436 ttcgccgtcacccccggcgactgca 5924460
>gb|AC132380.6| Mus musculus BAC clone RP23-414A20 from chromosome 16, complete sequence Length = 198912 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 5 acaagaagaaaagcaacacaagagagaaa 33 ||||||||||||| || |||||||||||| Sbjct: 178806 acaagaagaaaaggaaaacaagagagaaa 178778
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ggtggccgcggcggcgagggc 114 ||||||||||||||||||||| Sbjct: 4987499 ggtggccgcggcggcgagggc 4987479
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 gccccggcggcgcaggcgtgg 133 ||||||||||||||||||||| Sbjct: 869962 gccccggcggcgcaggcgtgg 869982
>gb|AC097499.3| Homo sapiens BAC clone RP11-333J2 from 2, complete sequence Length = 193973 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 aagaagaaaagcaacacaaga 27 ||||||||||||||||||||| Sbjct: 172059 aagaagaaaagcaacacaaga 172039
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 ttcgccgacacccccggcgactgca 329 ||||||| ||||||||||||||||| Sbjct: 66884 ttcgccgtcacccccggcgactgca 66908
>dbj|AK120944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N02, full insert sequence Length = 2827 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ttcgccgacacccccggcgactgca 329 ||||||| ||||||||||||||||| Sbjct: 1276 ttcgccgtcacccccggcgactgca 1252
>gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, complete sequence Length = 189238 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 690 agaagcagtgggaggcgtgcc 710 ||||||||||||||||||||| Sbjct: 39669 agaagcagtgggaggcgtgcc 39689
>gb|AY109350.1| Zea mays CL844_1 mRNA sequence Length = 4275 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 618 tcttcgacaaggaccaggacgccat 642 ||||||||||||||| ||||||||| Sbjct: 656 tcttcgacaaggacctggacgccat 680
>gb|AF159297.2| Zea mays pollen extensin-like protein (Pex2) gene, complete cds Length = 3601 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 618 tcttcgacaaggaccaggacgccat 642 ||||||||||||||| ||||||||| Sbjct: 1065 tcttcgacaaggacctggacgccat 1089
>emb|AJ000062.1|MMAJ0062 Mus musculus partial gene encoding deoxyribonuclease I and 5' UTR Length = 4827 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 acaagaagaaaagcaacacaagagagaaa 33 ||||||||||||| || |||||||||||| Sbjct: 1616 acaagaagaaaaggaaaacaagagagaaa 1644 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 175,935,791 Number of extensions: 9230830 Number of successful extensions: 214589 Number of sequences better than 10.0: 50 Number of HSP's gapped: 214580 Number of HSP's successfully gapped: 74 Length of query: 1197 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1174 Effective length of database: 18,503,978,556 Effective search space: 21723670824744 Effective search space used: 21723670824744 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)