ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38f04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK099594:Os06g0105500 28 8.3

>AK099594:Os06g0105500 |
          Length = 720
 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -3

Query: 459 YMHTCVTWWLMTKLESGSKSQLITFPLYYYKGLSNVGTW-KQSRGEGEERDL 307
           Y+H  ++WW++    +GS        ++Y    S    W +QS  EG +RD+
Sbjct: 307 YVHAIISWWVLQLDSAGS--------IFY----STAPRWARQSSSEGPQRDM 346


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 23,041,940
Number of extensions: 488564
Number of successful extensions: 1031
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1031
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 189
Effective length of database: 11,395,755
Effective search space: 2153797695
Effective search space used: 2153797695
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top