ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf41j05 |
|---|---|
| Clone Library Name | barley_pub |
>Q28181:CNGB1_BOVIN 240 kDa protein of rod photoreceptor CNG-channel [Contains:| Glutamic acid-rich protein - Bos taurus (Bovine) Length = 1394 Score = 34.3 bits (77), Expect = 0.70 Identities = 24/87 (27%), Positives = 42/87 (48%) Frame = -2 Query: 646 EHDRADEQPSRDGREQRSNDRLDRYEQGGVVRHEDDRGYGGDEQRQRQRCEHGRGHCGCA 467 E + +E+ +GRE+ + ++ E+ G + E++ G DE+ + + E GRG Sbjct: 378 EEEEGEEKEEEEGREKEEEEG-EKKEEEGREKEEEEGGEKEDEEGREKEEEEGRG----- 431 Query: 466 LDEAEESQVLGLGEQSELLQRGERDAE 386 E EE GE+ E RG+ + E Sbjct: 432 -KEEEEG-----GEKEEEEGRGKEEVE 452
>Q01133:FMRA_CALPA Antho-RFamide neuropeptides precursor [Contains: Antho-RFamide] -| Calliactis parasitica (Sea anemone) Length = 334 Score = 33.5 bits (75), Expect = 1.2 Identities = 25/89 (28%), Positives = 39/89 (43%) Frame = -2 Query: 631 DEQPSRDGREQRSNDRLDRYEQGGVVRHEDDRGYGGDEQRQRQRCEHGRGHCGCALDEAE 452 +E R GRE+ EQG R ED +G +E++ R E +G G D+ Sbjct: 158 EEDQGRFGREEDQGRFGREEEQGRFGREEDQGRFGREEEQGRFGREEDQGRFGREEDQGR 217 Query: 451 ESQVLGLGEQSELLQRGERDAELLRLGQQ 365 G + E + G+RD + R G++ Sbjct: 218 ------FGREEEQGRFGKRDEDQGRFGKR 240
>Q946J8:LHP1_ARATH Protein LIKE HETEROCHROMATIN PROTEIN1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 445 Score = 33.1 bits (74), Expect = 1.6 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = -2 Query: 655 QSIEHDRADEQPSRDGREQRSNDRLDRYEQGGVVRHEDDRGYGGDEQRQR 506 +SI + D++P+ DG E+ D + + GG E+ G GG E+R + Sbjct: 55 ESILREIGDDRPTEDGDEEEEEDEDE--DDGGDEEDEEGEGEGGQEERPK 102
>Q6PJ61:FBX46_HUMAN F-box only protein 46 - Homo sapiens (Human)| Length = 646 Score = 33.1 bits (74), Expect = 1.6 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +3 Query: 105 QYQQQSPAAALRP-VCPSPSGASRPPQGEGTSRSRP 209 Q Q + P+AAL+P CP P G + P G S + P Sbjct: 22 QNQPRPPSAALKPSACPEPGGGAEPDHGPAHSENTP 57
>P41109:Y4651_STRCO Putative lipoprotein SCO4651 precursor - Streptomyces coelicolor| Length = 282 Score = 32.3 bits (72), Expect = 2.7 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Frame = -2 Query: 724 TGGVSYYKTNIYSINGVKVL-----IVLQSIEHDRADEQPSRDGREQRSNDRLDRYEQGG 560 TG K ++ GVK + L +E ADE + + Q+S L++YE+ G Sbjct: 160 TGAKDVEKVGTETVEGVKTTHYKGTVTLADLEKSLADEDKATRDKRQKS---LEQYEKMG 216 Query: 559 VVRHEDDRGYGGDEQRQRQR 500 V + D GD+Q ++ R Sbjct: 217 VDKLTMDMWVDGDDQTKQFR 236
>P09052:VASA_DROME ATP-dependent RNA helicase vasa - Drosophila melanogaster (Fruit| fly) Length = 661 Score = 32.3 bits (72), Expect = 2.7 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%) Frame = -2 Query: 646 EHDRADEQPSRDGREQRSNDR---LDRYEQGGVVRHEDDRGYGGDEQRQR 506 E++ DE+ R RE+R +R LDR E+GG +RG GG +R+R Sbjct: 134 ENEDGDERRGRLDREERGGERRGRLDREERGG---ERGERGDGGFARRRR 180
>P22793:TRHY_SHEEP Trichohyalin - Ovis aries (Sheep)| Length = 1549 Score = 32.0 bits (71), Expect = 3.5 Identities = 19/58 (32%), Positives = 34/58 (58%) Frame = -2 Query: 658 LQSIEHDRADEQPSRDGREQRSNDRLDRYEQGGVVRHEDDRGYGGDEQRQRQRCEHGR 485 L+ +E R +EQ R+ R Q +R +Y + ++R E++R + ++Q QR+ CE R Sbjct: 775 LEKVELQREEEQLQREKRRQ---ERERQYREEELLR-EEERLHRKEQQLQREECEKRR 828
>P01181:NEU2_SHEEP Vasopressin-neurophysin 2-copeptin precursor - Ovis aries (Sheep)| Length = 147 Score = 32.0 bits (71), Expect = 3.5 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = -2 Query: 202 DLEVPSPCGGREAPLGLGQTGRRAAAGDCC 113 ++ +PSPC + P G G GR AAAG CC Sbjct: 59 EIYLPSPCQSGQKPCGSG--GRCAAAGICC 86
>Q9EST6:AN32B_RAT Acidic leucine-rich nuclear phosphoprotein 32 family member B -| Rattus norvegicus (Rat) Length = 272 Score = 31.6 bits (70), Expect = 4.6 Identities = 23/84 (27%), Positives = 36/84 (42%) Frame = -2 Query: 646 EHDRADEQPSRDGREQRSNDRLDRYEQGGVVRHEDDRGYGGDEQRQRQRCEHGRGHCGCA 467 E + +E+ DG E+ D D E V +D+ G+E+ GH G Sbjct: 186 EGEDEEEEEDEDGEEEEDEDEEDEDEDEDVEGEDDEDEVSGEEEE--------FGHDG-E 236 Query: 466 LDEAEESQVLGLGEQSELLQRGER 395 +DE EE + E+ E +GE+ Sbjct: 237 VDEDEEDEDEDEDEEEEESGKGEK 260
>Q9EST5:AN32B_MOUSE Acidic leucine-rich nuclear phosphoprotein 32 family member B - Mus| musculus (Mouse) Length = 272 Score = 31.6 bits (70), Expect = 4.6 Identities = 23/84 (27%), Positives = 36/84 (42%) Frame = -2 Query: 646 EHDRADEQPSRDGREQRSNDRLDRYEQGGVVRHEDDRGYGGDEQRQRQRCEHGRGHCGCA 467 E + +E+ DG E+ D D E V +D+ G+E+ GH G Sbjct: 186 EGEDEEEEEDEDGEEEEDEDEEDEDEDEDVEGEDDEDEVSGEEEE--------FGHDG-E 236 Query: 466 LDEAEESQVLGLGEQSELLQRGER 395 +DE EE + E+ E +GE+ Sbjct: 237 VDEDEEDEDEDEDEEEEESGKGEK 260
>P01186:NEU2_RAT Vasopressin-neurophysin 2-copeptin precursor - Rattus norvegicus| (Rat) Length = 168 Score = 31.2 bits (69), Expect = 5.9 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -2 Query: 193 VPSPCGGREAPLGLGQTGRRAAAGDCC 113 +PSPC + P G G GR AAAG CC Sbjct: 85 LPSPCQSGQKPCGSG--GRCAAAGICC 109
>P01183:NEU2_PIG Vasopressin-neurophysin 2-copeptin precursor - Sus scrofa (Pig)| Length = 166 Score = 31.2 bits (69), Expect = 5.9 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -2 Query: 193 VPSPCGGREAPLGLGQTGRRAAAGDCC 113 +PSPC + P G G GR AAAG CC Sbjct: 81 LPSPCQSGQKPCGSG--GRCAAAGICC 105
>P81768:NEU2_LOXAF Neurophysin 2 - Loxodonta africana (African elephant)| Length = 92 Score = 31.2 bits (69), Expect = 5.9 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -2 Query: 193 VPSPCGGREAPLGLGQTGRRAAAGDCC 113 +PSPC + P G G GR AAAG CC Sbjct: 50 LPSPCQSGQKPCGSG--GRCAAAGICC 74
>P01182:NEU2_HORSE Neurophysin 2 - Equus caballus (Horse)| Length = 92 Score = 31.2 bits (69), Expect = 5.9 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -2 Query: 193 VPSPCGGREAPLGLGQTGRRAAAGDCC 113 +PSPC + P G G GR AAAG CC Sbjct: 47 LPSPCQSGQKPCGSG--GRCAAAGICC 71
>P01180:NEU2_BOVIN Vasopressin-neurophysin 2-copeptin precursor - Bos taurus (Bovine)| Length = 166 Score = 31.2 bits (69), Expect = 5.9 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -2 Query: 193 VPSPCGGREAPLGLGQTGRRAAAGDCC 113 +PSPC + P G G GR AAAG CC Sbjct: 81 LPSPCQSGQKPCGSG--GRCAAAGICC 105
>P01184:NEU2_BALPH Vasopressin-neurophysin 2 precursor [Contains: Arg-vasopressin;| Neurophysin 2] - Balaenoptera physalus (Finback whale) (Common rorqual) Length = 107 Score = 31.2 bits (69), Expect = 5.9 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -2 Query: 193 VPSPCGGREAPLGLGQTGRRAAAGDCC 113 +PSPC + P G G GR AAAG CC Sbjct: 62 LPSPCQSGQKPCGSG--GRCAAAGICC 86
>P13389:NEU1_SHEEP Oxytocin-neurophysin 1 precursor - Ovis aries (Sheep)| Length = 125 Score = 31.2 bits (69), Expect = 5.9 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -2 Query: 193 VPSPCGGREAPLGLGQTGRRAAAGDCC 113 +PSPC + P G G GR AAAG CC Sbjct: 81 LPSPCQSGQKPCGSG--GRCAAAGICC 105
>P01176:NEU1_HORSE Oxytocin-neurophysin 1 precursor - Equus caballus (Horse)| Length = 105 Score = 31.2 bits (69), Expect = 5.9 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -2 Query: 193 VPSPCGGREAPLGLGQTGRRAAAGDCC 113 +PSPC + P G G GR AAAG CC Sbjct: 62 LPSPCQSGQKPCGSG--GRCAAAGICC 86
>P01175:NEU1_BOVIN Oxytocin-neurophysin 1 precursor - Bos taurus (Bovine)| Length = 125 Score = 31.2 bits (69), Expect = 5.9 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -2 Query: 193 VPSPCGGREAPLGLGQTGRRAAAGDCC 113 +PSPC + P G G GR AAAG CC Sbjct: 81 LPSPCQSGQKPCGSG--GRCAAAGICC 105
>Q7ZY47:DDX42_XENLA ATP-dependent RNA helicase DDX42 - Xenopus laevis (African clawed| frog) Length = 947 Score = 30.8 bits (68), Expect = 7.8 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = -2 Query: 571 EQGGVVRHEDDRGYGGDEQR--QRQRCEHGRGH 479 E GG RH D +G GD R R+ HG GH Sbjct: 803 ESGGRERHSDSKGRHGDSHRPSDREGYRHGDGH 835
>Q9GKK8:BRCA1_PANTR Breast cancer type 1 susceptibility protein homolog - Pan troglodytes| (Chimpanzee) Length = 1863 Score = 30.8 bits (68), Expect = 7.8 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%) Frame = -2 Query: 559 VVRHEDDRGYGGDEQRQRQRCEH---GRGHCGCALDEAEESQVLGLGEQSELLQRGERDA 389 +V +++RG G +E Q ++ G GC + + GL QS++L +RD Sbjct: 1340 LVSDDEERGTGLEENNQEEQSMDSNLGEAASGCESETSVSEDCSGLSSQSDILTTQQRDT 1399 Query: 388 ---ELLRLGQQ 365 L++L Q+ Sbjct: 1400 MQDNLIKLQQE 1410
>P38398:BRCA1_HUMAN Breast cancer type 1 susceptibility protein - Homo sapiens (Human)| Length = 1863 Score = 30.8 bits (68), Expect = 7.8 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%) Frame = -2 Query: 559 VVRHEDDRGYGGDEQRQRQRCEH---GRGHCGCALDEAEESQVLGLGEQSELLQRGERDA 389 +V +++RG G +E Q ++ G GC + + GL QS++L +RD Sbjct: 1340 LVSDDEERGTGLEENNQEEQSMDSNLGEAASGCESETSVSEDCSGLSSQSDILTTQQRDT 1399 Query: 388 ---ELLRLGQQ 365 L++L Q+ Sbjct: 1400 MQHNLIKLQQE 1410
>Q6J6I8:BRCA1_GORGO Breast cancer type 1 susceptibility protein homolog - Gorilla gorilla| gorilla (Lowland gorilla) Length = 1863 Score = 30.8 bits (68), Expect = 7.8 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%) Frame = -2 Query: 559 VVRHEDDRGYGGDEQRQRQRCEH---GRGHCGCALDEAEESQVLGLGEQSELLQRGERDA 389 +V +++RG G +E Q ++ G GC + + GL QS++L +RD Sbjct: 1340 LVSDDEERGTGLEENNQEEQSMDSNLGEAASGCESETSVSEDCSGLSSQSDILTTQQRDT 1399 Query: 388 ---ELLRLGQQ 365 L++L Q+ Sbjct: 1400 MQDNLIKLQQE 1410 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 118,090,679 Number of extensions: 2419508 Number of successful extensions: 7726 Number of sequences better than 10.0: 23 Number of HSP's gapped: 7696 Number of HSP's successfully gapped: 23 Length of query: 299 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 187 Effective length of database: 69,965,399 Effective search space: 13083529613 Effective search space used: 13083529613 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
