| Clone Name | FLbaf41j05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107731.1| Zea mays PCO069957 mRNA sequence Length = 925 Score = 361 bits (182), Expect = 3e-96 Identities = 399/469 (85%), Gaps = 3/469 (0%) Strand = Plus / Plus Query: 94 agaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtcctgtctgcccca 153 |||||||||||||||| | ||||| ||| | ||||||||||||||||| | ||||| || Sbjct: 90 agaaatggctgcaatacctgcagcgatcccgggctgctgctcttcgtctcgcctgcctca 149 Query: 154 gtcccagcggggcctcccgtcctccgcaaggagaaggcacttcaaggtcacggccatggc 213 | | || || |||||| ||||| |||| ||||||| ||||||||||||||||||||| Sbjct: 150 g--cttgctgg-cctccctgcctccacaagcagaaggcgcttcaaggtcacggccatggc 206 Query: 214 tcccaagaacaaggtgaacaagtacgacgatgggtggtccaagcagtggttcggcgcggg 273 ||||| || ||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 207 gcccaaaaagaaggtgaaccgctacgacgagagctggtcgaagcagtggttcggcgcggg 266 Query: 274 gatcttcgcggaggggagcgaggaggcgtcggtggacgtgttcaagaagctggagaagcg 333 |||||||||||||| |||||||||| ||| |||||||||||||||||||||||| ||| Sbjct: 267 catcttcgcggagggcagcgaggaggtgtccgtggacgtgttcaagaagctggagcggcg 326 Query: 334 caaggtgctgagcaccgtcgagaaggcagggctgctgtccaaggcggaggagctcggcgt 393 |||||||||||||||||| |||||||| || |||||||||||||| |||||||| ||| | Sbjct: 327 caaggtgctgagcaccgtggagaaggccggcctgctgtccaaggccgaggagctgggcct 386 Query: 394 cacgctctcctcgctggagaagctcggactgctctccaaggccgaggacctgggactcct 453 ||||||||||||||||||||||| || |||||||||||||||||||||||||| || || Sbjct: 387 gacgctctcctcgctggagaagctgggcctgctctccaaggccgaggacctgggcctgct 446 Query: 454 cagcctcgtcgagagcgcagccacagtgtccccggccgtgctcgcatcgctgtcgctgcc 513 |||||||||||||| ||| || ||||||| |||| ||||| || | |||||||| Sbjct: 447 cagcctcgtcgagaccgcggcggggacgtccccgtccgtcctcgcctccatctcgctgcc 506 Query: 514 gctgctcgtcgcctccatagccacggtcgtcttcgtgccggacgactcc 562 ||| ||||| ||| || | ||| |||| ||| ||||||| ||||||||| Sbjct: 507 gctcctcgtggccgccgtcgccgcggtggtcgtcgtgcccgacgactcc 555 Score = 58.0 bits (29), Expect = 6e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 620 gggctgttcgtcggctctgtcgtgctcgatggactgcagga 660 ||||||||||| |||||||||||||||| ||| |||||||| Sbjct: 613 gggctgttcgtgggctctgtcgtgctcgctggcctgcagga 653
>ref|NM_001049960.1| Oryza sativa (japonica cultivar-group) Os01g0585300 (Os01g0585300) mRNA, complete cds Length = 754 Score = 353 bits (178), Expect = 7e-94 Identities = 250/274 (91%) Strand = Plus / Plus Query: 193 cttcaaggtcacggccatggctcccaagaacaaggtgaacaagtacgacgatgggtggtc 252 ||||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||| Sbjct: 140 cttcaaggtcacggccatggctccccagaagaaggtgaacaggtacgacgagaagtggtc 199 Query: 253 caagcagtggttcggcgcggggatcttcgcggaggggagcgaggaggcgtcggtggacgt 312 |||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||| Sbjct: 200 gaagcagtggttcggggcggggatattcgcggaggggagcgaggaggtggaggtggacgt 259 Query: 313 gttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaaggcagggctgctgtc 372 ||||||||||||||||| ||| |||||||||||||| || |||||||| ||||||||||| Sbjct: 260 gttcaagaagctggagaggcggaaggtgctgagcacggtggagaaggccgggctgctgtc 319 Query: 373 caaggcggaggagctcggcgtcacgctctcctcgctggagaagctcggactgctctccaa 432 || ||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||| Sbjct: 320 cagggcggaggagctcggcgtcacgctctcctcgctcgaggagctcggcctcctctccaa 379 Query: 433 ggccgaggacctgggactcctcagcctcgtcgag 466 |||||||||||| || |||||||||||||||||| Sbjct: 380 ggccgaggacctcggcctcctcagcctcgtcgag 413 Score = 48.1 bits (24), Expect = 0.055 Identities = 48/56 (85%) Strand = Plus / Plus Query: 86 gaggaggcagaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtc 141 ||||||| |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 42 gaggaggaagaaatggctgccgtccaagcagcaatctccacctgctgctcttcgtc 97
>dbj|AK099180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103B06, full insert sequence Length = 686 Score = 353 bits (178), Expect = 7e-94 Identities = 250/274 (91%) Strand = Plus / Plus Query: 193 cttcaaggtcacggccatggctcccaagaacaaggtgaacaagtacgacgatgggtggtc 252 ||||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||| Sbjct: 125 cttcaaggtcacggccatggctccccagaagaaggtgaacaggtacgacgagaagtggtc 184 Query: 253 caagcagtggttcggcgcggggatcttcgcggaggggagcgaggaggcgtcggtggacgt 312 |||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||| Sbjct: 185 gaagcagtggttcggggcggggatattcgcggaggggagcgaggaggtggaggtggacgt 244 Query: 313 gttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaaggcagggctgctgtc 372 ||||||||||||||||| ||| |||||||||||||| || |||||||| ||||||||||| Sbjct: 245 gttcaagaagctggagaggcggaaggtgctgagcacggtggagaaggccgggctgctgtc 304 Query: 373 caaggcggaggagctcggcgtcacgctctcctcgctggagaagctcggactgctctccaa 432 || ||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||| Sbjct: 305 cagggcggaggagctcggcgtcacgctctcctcgctcgaggagctcggcctcctctccaa 364 Query: 433 ggccgaggacctgggactcctcagcctcgtcgag 466 |||||||||||| || |||||||||||||||||| Sbjct: 365 ggccgaggacctcggcctcctcagcctcgtcgag 398 Score = 48.1 bits (24), Expect = 0.055 Identities = 48/56 (85%) Strand = Plus / Plus Query: 86 gaggaggcagaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtc 141 ||||||| |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 27 gaggaggaagaaatggctgccgtccaagcagcaatctccacctgctgctcttcgtc 82
>dbj|AK071353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023094M23, full insert sequence Length = 754 Score = 353 bits (178), Expect = 7e-94 Identities = 250/274 (91%) Strand = Plus / Plus Query: 193 cttcaaggtcacggccatggctcccaagaacaaggtgaacaagtacgacgatgggtggtc 252 ||||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||| Sbjct: 141 cttcaaggtcacggccatggctccccagaagaaggtgaacaggtacgacgagaagtggtc 200 Query: 253 caagcagtggttcggcgcggggatcttcgcggaggggagcgaggaggcgtcggtggacgt 312 |||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||| Sbjct: 201 gaagcagtggttcggggcggggatattcgcggaggggagcgaggaggtggaggtggacgt 260 Query: 313 gttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaaggcagggctgctgtc 372 ||||||||||||||||| ||| |||||||||||||| || |||||||| ||||||||||| Sbjct: 261 gttcaagaagctggagaggcggaaggtgctgagcacggtggagaaggccgggctgctgtc 320 Query: 373 caaggcggaggagctcggcgtcacgctctcctcgctggagaagctcggactgctctccaa 432 || ||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||| Sbjct: 321 cagggcggaggagctcggcgtcacgctctcctcgctcgaggagctcggcctcctctccaa 380 Query: 433 ggccgaggacctgggactcctcagcctcgtcgag 466 |||||||||||| || |||||||||||||||||| Sbjct: 381 ggccgaggacctcggcctcctcagcctcgtcgag 414 Score = 48.1 bits (24), Expect = 0.055 Identities = 48/56 (85%) Strand = Plus / Plus Query: 86 gaggaggcagaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtc 141 ||||||| |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 43 gaggaggaagaaatggctgccgtccaagcagcaatctccacctgctgctcttcgtc 98
>gb|DQ244387.1| Zea mays clone 6785 mRNA sequence Length = 890 Score = 339 bits (171), Expect = 1e-89 Identities = 325/374 (86%), Gaps = 3/374 (0%) Strand = Plus / Plus Query: 94 agaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtcctgtctgcccca 153 |||||||||||||||| | ||||| ||| | ||||||||||||||||| | ||||| || Sbjct: 104 agaaatggctgcaatacctgcagcgatcccgggctgctgctcttcgtctcgcctgcctca 163 Query: 154 gtcccagcggggcctcccgtcctccgcaaggagaaggcacttcaaggtcacggccatggc 213 | | || || |||||| ||||| |||| ||||||| ||||||||||||||||||||| Sbjct: 164 g--cttgctgg-cctccctgcctccacaagcagaaggcgcttcaaggtcacggccatggc 220 Query: 214 tcccaagaacaaggtgaacaagtacgacgatgggtggtccaagcagtggttcggcgcggg 273 ||||| || ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 221 gcccaaaaagaaggtgaaccgctacgacgagaactggtcgaagcagtggttcggcgcggg 280 Query: 274 gatcttcgcggaggggagcgaggaggcgtcggtggacgtgttcaagaagctggagaagcg 333 |||||||||||||| |||||||||| ||| |||||||||||||||||||||||| ||| Sbjct: 281 catcttcgcggagggcagcgaggaggtgtccgtggacgtgttcaagaagctggagcggcg 340 Query: 334 caaggtgctgagcaccgtcgagaaggcagggctgctgtccaaggcggaggagctcggcgt 393 |||||||||||||||||| |||||||| || |||||||||||||| |||||||| ||| | Sbjct: 341 caaggtgctgagcaccgtggagaaggccggcctgctgtccaaggccgaggagctgggcct 400 Query: 394 cacgctctcctcgctggagaagctcggactgctctccaaggccgaggacctgggactcct 453 ||||||||||||||||||||||| || ||||||||||||||||||||| |||| || || Sbjct: 401 gacgctctcctcgctggagaagctgggcctgctctccaaggccgaggacttgggcctgct 460 Query: 454 cagcctcgtcgaga 467 |||||||||||||| Sbjct: 461 cagcctcgtcgaga 474 Score = 58.0 bits (29), Expect = 6e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 620 gggctgttcgtcggctctgtcgtgctcgatggactgcagga 660 ||||||||||| |||||||||||||||| ||| |||||||| Sbjct: 627 gggctgttcgtgggctctgtcgtgctcgctggcctgcagga 667
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 305 bits (154), Expect = 1e-79 Identities = 220/242 (90%) Strand = Plus / Minus Query: 225 aggtgaacaagtacgacgatgggtggtccaagcagtggttcggcgcggggatcttcgcgg 284 ||||||||| ||||||||| |||||| |||||||||||||| |||||||| ||||||| Sbjct: 22751239 aggtgaacaggtacgacgagaagtggtcgaagcagtggttcggggcggggatattcgcgg 22751180 Query: 285 aggggagcgaggaggcgtcggtggacgtgttcaagaagctggagaagcgcaaggtgctga 344 ||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 22751179 aggggagcgaggaggtggaggtggacgtgttcaagaagctggagaggcggaaggtgctga 22751120 Query: 345 gcaccgtcgagaaggcagggctgctgtccaaggcggaggagctcggcgtcacgctctcct 404 |||| || |||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 22751119 gcacggtggagaaggccgggctgctgtccagggcggaggagctcggcgtcacgctctcct 22751060 Query: 405 cgctggagaagctcggactgctctccaaggccgaggacctgggactcctcagcctcgtcg 464 |||| ||| ||||||| || |||||||||||||||||||| || |||||||||||||||| Sbjct: 22751059 cgctcgaggagctcggcctcctctccaaggccgaggacctcggcctcctcagcctcgtcg 22751000 Query: 465 ag 466 || Sbjct: 22750999 ag 22750998 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 193 cttcaaggtcacggccatggctcccaagaacaaggt 228 ||||||||||||||||||||||||| |||| ||||| Sbjct: 22751370 cttcaaggtcacggccatggctccccagaagaaggt 22751335 Score = 48.1 bits (24), Expect = 0.055 Identities = 48/56 (85%) Strand = Plus / Minus Query: 86 gaggaggcagaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtc 141 ||||||| |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 22751468 gaggaggaagaaatggctgccgtccaagcagcaatctccacctgctgctcttcgtc 22751413
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 305 bits (154), Expect = 1e-79 Identities = 220/242 (90%) Strand = Plus / Minus Query: 225 aggtgaacaagtacgacgatgggtggtccaagcagtggttcggcgcggggatcttcgcgg 284 ||||||||| ||||||||| |||||| |||||||||||||| |||||||| ||||||| Sbjct: 127951 aggtgaacaggtacgacgagaagtggtcgaagcagtggttcggggcggggatattcgcgg 127892 Query: 285 aggggagcgaggaggcgtcggtggacgtgttcaagaagctggagaagcgcaaggtgctga 344 ||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 127891 aggggagcgaggaggtggaggtggacgtgttcaagaagctggagaggcggaaggtgctga 127832 Query: 345 gcaccgtcgagaaggcagggctgctgtccaaggcggaggagctcggcgtcacgctctcct 404 |||| || |||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 127831 gcacggtggagaaggccgggctgctgtccagggcggaggagctcggcgtcacgctctcct 127772 Query: 405 cgctggagaagctcggactgctctccaaggccgaggacctgggactcctcagcctcgtcg 464 |||| ||| ||||||| || |||||||||||||||||||| || |||||||||||||||| Sbjct: 127771 cgctcgaggagctcggcctcctctccaaggccgaggacctcggcctcctcagcctcgtcg 127712 Query: 465 ag 466 || Sbjct: 127711 ag 127710 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 193 cttcaaggtcacggccatggctcccaagaacaaggt 228 ||||||||||||||||||||||||| |||| ||||| Sbjct: 128082 cttcaaggtcacggccatggctccccagaagaaggt 128047 Score = 48.1 bits (24), Expect = 0.055 Identities = 48/56 (85%) Strand = Plus / Minus Query: 86 gaggaggcagaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtc 141 ||||||| |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 128180 gaggaggaagaaatggctgccgtccaagcagcaatctccacctgctgctcttcgtc 128125
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0712E02 Length = 158084 Score = 305 bits (154), Expect = 1e-79 Identities = 220/242 (90%) Strand = Plus / Minus Query: 225 aggtgaacaagtacgacgatgggtggtccaagcagtggttcggcgcggggatcttcgcgg 284 ||||||||| ||||||||| |||||| |||||||||||||| |||||||| ||||||| Sbjct: 68628 aggtgaacaggtacgacgagaagtggtcgaagcagtggttcggggcggggatattcgcgg 68569 Query: 285 aggggagcgaggaggcgtcggtggacgtgttcaagaagctggagaagcgcaaggtgctga 344 ||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 68568 aggggagcgaggaggtggaggtggacgtgttcaagaagctggagaggcggaaggtgctga 68509 Query: 345 gcaccgtcgagaaggcagggctgctgtccaaggcggaggagctcggcgtcacgctctcct 404 |||| || |||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 68508 gcacggtggagaaggccgggctgctgtccagggcggaggagctcggcgtcacgctctcct 68449 Query: 405 cgctggagaagctcggactgctctccaaggccgaggacctgggactcctcagcctcgtcg 464 |||| ||| ||||||| || |||||||||||||||||||| || |||||||||||||||| Sbjct: 68448 cgctcgaggagctcggcctcctctccaaggccgaggacctcggcctcctcagcctcgtcg 68389 Query: 465 ag 466 || Sbjct: 68388 ag 68387 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 193 cttcaaggtcacggccatggctcccaagaacaaggt 228 ||||||||||||||||||||||||| |||| ||||| Sbjct: 68759 cttcaaggtcacggccatggctccccagaagaaggt 68724 Score = 48.1 bits (24), Expect = 0.055 Identities = 48/56 (85%) Strand = Plus / Minus Query: 86 gaggaggcagaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtc 141 ||||||| |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 68857 gaggaggaagaaatggctgccgtccaagcagcaatctccacctgctgctcttcgtc 68802
>gb|DQ244768.1| Zea mays clone 10571 mRNA sequence Length = 819 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 308 gacgtgttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 357 ||||| ||||||||||| |||||||| || ||||| |||| ||||||||| Sbjct: 277 gacgttttcaagaagcttgagaagcgaaaagtgctcagcaacgtcgagaa 326
>ref|NM_106132.2| Arabidopsis thaliana CPK30; calcium- and calmodulin-dependent protein kinase/ kinase/ protein kinase (CPK30) mRNA, complete cds Length = 2550 Score = 48.1 bits (24), Expect = 0.055 Identities = 39/44 (88%) Strand = Plus / Minus Query: 314 ttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 357 |||||||||||||||||||| || ||| |||||| ||| ||||| Sbjct: 2518 ttcaagaagctggagaagcgaaaagtgttgagcaacgttgagaa 2475
>ref|NM_106131.2| Arabidopsis thaliana unknown protein (AT1G74730) mRNA, complete cds Length = 1178 Score = 48.1 bits (24), Expect = 0.055 Identities = 39/44 (88%) Strand = Plus / Plus Query: 314 ttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 357 |||||||||||||||||||| || ||| |||||| ||| ||||| Sbjct: 305 ttcaagaagctggagaagcgaaaagtgttgagcaacgttgagaa 348
>gb|AY088988.1| Arabidopsis thaliana clone 12408 mRNA, complete sequence Length = 812 Score = 48.1 bits (24), Expect = 0.055 Identities = 39/44 (88%) Strand = Plus / Plus Query: 314 ttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 357 |||||||||||||||||||| || ||| |||||| ||| ||||| Sbjct: 305 ttcaagaagctggagaagcgaaaagtgttgagcaacgttgagaa 348
>gb|AF386985.1|AF386985 Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 784 Score = 48.1 bits (24), Expect = 0.055 Identities = 39/44 (88%) Strand = Plus / Plus Query: 314 ttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 357 |||||||||||||||||||| || ||| |||||| ||| ||||| Sbjct: 272 ttcaagaagctggagaagcgaaaagtgttgagcaacgttgagaa 315
>gb|BT002152.1| Arabidopsis thaliana Unknown protein (At1g74730) mRNA, complete cds Length = 639 Score = 48.1 bits (24), Expect = 0.055 Identities = 39/44 (88%) Strand = Plus / Plus Query: 314 ttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 357 |||||||||||||||||||| || ||| |||||| ||| ||||| Sbjct: 241 ttcaagaagctggagaagcgaaaagtgttgagcaacgttgagaa 284
>gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F25A4 sequence, complete sequence Length = 115721 Score = 48.1 bits (24), Expect = 0.055 Identities = 39/44 (88%) Strand = Plus / Minus Query: 314 ttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 357 |||||||||||||||||||| || ||| |||||| ||| ||||| Sbjct: 95555 ttcaagaagctggagaagcgaaaagtgttgagcaacgttgagaa 95512
>emb|CT830409.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA020I20, full insert sequence Length = 764 Score = 46.1 bits (23), Expect = 0.22 Identities = 23/23 (100%) Strand = Plus / Plus Query: 365 ctgctgtccaaggcggaggagct 387 ||||||||||||||||||||||| Sbjct: 326 ctgctgtccaaggcggaggagct 348
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12 Length = 340900 Score = 46.1 bits (23), Expect = 0.22 Identities = 29/31 (93%) Strand = Plus / Plus Query: 511 gccgctgctcgtcgcctccatagccacggtc 541 ||||||||||||||||| ||| ||||||||| Sbjct: 75068 gccgctgctcgtcgccttcatcgccacggtc 75098
>gb|AC114962.2| Homo sapiens chromosome 5 clone RP11-206N2, complete sequence Length = 107278 Score = 46.1 bits (23), Expect = 0.22 Identities = 23/23 (100%) Strand = Plus / Minus Query: 62 tagaggaagaagggagcagggga 84 ||||||||||||||||||||||| Sbjct: 68645 tagaggaagaagggagcagggga 68623
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 44.1 bits (22), Expect = 0.86 Identities = 28/30 (93%) Strand = Plus / Minus Query: 307 ggacgtgttcaagaagctggagaagcgcaa 336 ||||||||||||| |||||||| ||||||| Sbjct: 11374900 ggacgtgttcaaggagctggagcagcgcaa 11374871
>ref|XM_505854.1| Yarrowia lipolytica CLIB122, YALI0F25091g predicted mRNA Length = 3024 Score = 44.1 bits (22), Expect = 0.86 Identities = 22/22 (100%) Strand = Plus / Plus Query: 316 caagaagctggagaagcgcaag 337 |||||||||||||||||||||| Sbjct: 2673 caagaagctggagaagcgcaag 2694
>ref|NM_137196.1| Drosophila melanogaster CG12964-RA (CG12964), mRNA Length = 3408 Score = 44.1 bits (22), Expect = 0.86 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 ggacgtgttcaagaagctggagaagcgcaa 336 ||||||||||||| |||||||| ||||||| Sbjct: 2346 ggacgtgttcaaggagctggagcagcgcaa 2375
>gb|BT024280.1| Drosophila melanogaster IP14311 full insert cDNA Length = 3936 Score = 44.1 bits (22), Expect = 0.86 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 ggacgtgttcaagaagctggagaagcgcaa 336 ||||||||||||| |||||||| ||||||| Sbjct: 2548 ggacgtgttcaaggagctggagcagcgcaa 2577
>gb|AC008343.4|AC008343 Drosophila melanogaster, chromosome 2R, region 51F-52A, BAC clone BACR03D24, complete sequence Length = 158402 Score = 44.1 bits (22), Expect = 0.86 Identities = 28/30 (93%) Strand = Plus / Minus Query: 307 ggacgtgttcaagaagctggagaagcgcaa 336 ||||||||||||| |||||||| ||||||| Sbjct: 137996 ggacgtgttcaaggagctggagcagcgcaa 137967
>gb|AC132338.4| Mus musculus BAC clone RP24-158J16 from chromosome 5, complete sequence Length = 163304 Score = 44.1 bits (22), Expect = 0.86 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 agaagggagcaggggaagagga 90 |||||||||||||||||||||| Sbjct: 131308 agaagggagcaggggaagagga 131287
>emb|BX841924.1|CNS09Y5J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 757 Score = 44.1 bits (22), Expect = 0.86 Identities = 31/34 (91%) Strand = Plus / Plus Query: 314 ttcaagaagctggagaagcgcaaggtgctgagca 347 |||||||||||||||||||| || ||| |||||| Sbjct: 292 ttcaagaagctggagaagcgaaaagtgttgagca 325
>gb|AC125061.3| Mus musculus BAC clone RP23-418E13 from 5, complete sequence Length = 210342 Score = 44.1 bits (22), Expect = 0.86 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 agaagggagcaggggaagagga 90 |||||||||||||||||||||| Sbjct: 200640 agaagggagcaggggaagagga 200661
>gb|AC008369.1|AC008369 Drosophila melanogaster, chromosome 2R, region 52A4-52B4, P1 clones BACR48C01 and DS08592, complete sequence Length = 192366 Score = 44.1 bits (22), Expect = 0.86 Identities = 28/30 (93%) Strand = Plus / Minus Query: 307 ggacgtgttcaagaagctggagaagcgcaa 336 ||||||||||||| |||||||| ||||||| Sbjct: 890 ggacgtgttcaaggagctggagcagcgcaa 861
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.86 Identities = 22/22 (100%) Strand = Plus / Plus Query: 316 caagaagctggagaagcgcaag 337 |||||||||||||||||||||| Sbjct: 3243440 caagaagctggagaagcgcaag 3243461
>emb|CR855227.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0159H11-OSIGBa0137A07, complete sequence Length = 144811 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 146 ctgccccagtcccagcggggcctcccgtc 174 |||||||||||||||||| ||||||||| Sbjct: 41245 ctgccccagtcccagcggatcctcccgtc 41217
>ref|XM_001228920.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_02405) mRNA, complete cds Length = 3852 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 gtcgctgccgctgctcgtcgc 525 ||||||||||||||||||||| Sbjct: 1249 gtcgctgccgctgctcgtcgc 1229
>emb|AM167904.1| Bordetella avium 197N complete genome Length = 3732255 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 gtggacgtgttcaagaagctg 325 ||||||||||||||||||||| Sbjct: 2485306 gtggacgtgttcaagaagctg 2485286
>emb|AM236086.1| Rhizobium leguminosarum bv. viciae plasmid pRL12 complete genome, strain 3841 Length = 870021 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 tcgctgccgctgctcgtcgcc 526 ||||||||||||||||||||| Sbjct: 312529 tcgctgccgctgctcgtcgcc 312509
>ref|XM_001131274.1| PREDICTED: Homo sapiens hypothetical protein LOC731924 (LOC731924), mRNA Length = 864 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 agggagcaggggaagaggagg 92 ||||||||||||||||||||| Sbjct: 430 agggagcaggggaagaggagg 450
>ref|XM_001130893.1| PREDICTED: Homo sapiens hypothetical protein LOC729643 (LOC729643), mRNA Length = 798 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 agggagcaggggaagaggagg 92 ||||||||||||||||||||| Sbjct: 364 agggagcaggggaagaggagg 384
>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence Length = 248540 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 agggagcaggggaagaggagg 92 ||||||||||||||||||||| Sbjct: 176070 agggagcaggggaagaggagg 176050
>gb|AC153564.6| Mus musculus 10 BAC RP23-39C23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 241022 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 aggaagaagggagcaggggaa 85 ||||||||||||||||||||| Sbjct: 16417 aggaagaagggagcaggggaa 16437
>gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, complete sequence Length = 176797 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ggagcaggggaagaggaggcagaaa 98 ||||| ||||||||||||||||||| Sbjct: 155507 ggagctggggaagaggaggcagaaa 155483
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 caaggtgctgagcaccgtcga 354 ||||||||||||||||||||| Sbjct: 3745615 caaggtgctgagcaccgtcga 3745595
>gb|AC121223.5| Rattus norvegicus BAC CH230-70M4 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 263147 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 64 gaggaagaagggagcaggggaagaggagg 92 |||||||||||||||| |||| ||||||| Sbjct: 166914 gaggaagaagggagcacgggaggaggagg 166886
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 ggcggaggagctcggcgtcac 396 ||||||||||||||||||||| Sbjct: 185332 ggcggaggagctcggcgtcac 185352
>gb|AC024474.8| Homo sapiens chromosome 15, clone RP11-686I6, complete sequence Length = 194973 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 gcaggggaagaggaggcagaa 97 ||||||||||||||||||||| Sbjct: 147885 gcaggggaagaggaggcagaa 147905
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 146 ctgccccagtcccagcggggcctcccgtc 174 |||||||||||||||||| ||||||||| Sbjct: 16128094 ctgccccagtcccagcggatcctcccgtc 16128066
>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence Length = 148054 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ggagcaggggaagaggaggcagaaa 98 ||||| ||||||||||||||||||| Sbjct: 29947 ggagctggggaagaggaggcagaaa 29923
>emb|AL023096.1|HS398I9 Human DNA sequence from clone RP3-398I9 on chromosome 1p34.3-36.13 Contains the 3' end of the RUNX3 gene for runt-related transcription factor 3 and a CpG island, complete sequence Length = 95241 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 ccaagaacaaggtgaacaagt 236 ||||||||||||||||||||| Sbjct: 31729 ccaagaacaaggtgaacaagt 31709
>gb|AC151989.4| Mus musculus BAC clone RP23-298C3 from chromosome 7, complete sequence Length = 217239 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ggagcaggggaagaggaggcagaaa 98 ||||||||||||||||||| ||||| Sbjct: 14033 ggagcaggggaagaggaggaagaaa 14009
>emb|BX842655.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 10/11 Length = 349965 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 775 tcagattcagatttcagatat 795 ||||||||||||||||||||| Sbjct: 135827 tcagattcagatttcagatat 135847
>emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067G20, complete sequence Length = 145825 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 146 ctgccccagtcccagcggggcctcccgtc 174 |||||||||||||||||| ||||||||| Sbjct: 88844 ctgccccagtcccagcggatcctcccgtc 88816
>gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, complete sequence Length = 115368 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ggagcaggggaagaggaggcagaaa 98 ||||| ||||||||||||||||||| Sbjct: 6523 ggagctggggaagaggaggcagaaa 6499
>gb|AC110118.8| Rattus norvegicus BAC CH230-310N6 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 175663 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 64 gaggaagaagggagcaggggaagaggagg 92 |||||||||||||||| |||| ||||||| Sbjct: 78088 gaggaagaagggagcacgggaggaggagg 78060
>gb|AC004704.2|AC004704 Homo sapiens chromosome 4 clone B341C20 map 4q25, complete sequence Length = 134187 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 806 catttgattttcacccacttc 826 ||||||||||||||||||||| Sbjct: 17356 catttgattttcacccacttc 17336
>gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, complete sequence Length = 166914 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 gcaggggaagaggaggcagaa 97 ||||||||||||||||||||| Sbjct: 98050 gcaggggaagaggaggcagaa 98070
>dbj|AP002815.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-939C17 Length = 174484 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 agggagcaggggaagaggagg 92 ||||||||||||||||||||| Sbjct: 92025 agggagcaggggaagaggagg 92005 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 144,365,763 Number of extensions: 7908644 Number of successful extensions: 177599 Number of sequences better than 10.0: 52 Number of HSP's gapped: 177590 Number of HSP's successfully gapped: 67 Length of query: 899 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 876 Effective length of database: 18,503,978,556 Effective search space: 16209485215056 Effective search space used: 16209485215056 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)