ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf41i14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK119204:Os07g0495000 | 488 | e-138 | 2 | AK073883:Os07g0495000 | 488 | e-138 | 3 | AK060721:Os07g0495000 | 488 | e-138 | 4 | AK111177: | 32 | 0.81 | 5 | AK101628:Os02g0169000 | 30 | 3.1 | 6 | AK120712:Os12g0608600 | 30 | 4.0 | 7 | AK101984:Os04g0577200 | 30 | 4.0 | 8 | AK059102:Os12g0608600 | 30 | 4.0 | 9 | AK069677:Os05g0435700 | 29 | 6.8 |
|---|
>AK119204:Os07g0495000 | Length = 309 Score = 488 bits (1256), Expect = e-138 Identities = 239/281 (85%), Positives = 253/281 (90%), Gaps = 4/281 (1%) Frame = +2 Query: 206 EGFCSAEPSNDGSQW----PPLYSKVTSPTLAPVHLQDLPGFTRSVLKKDHAVITPESHV 373 EGFCSAEPS PPLY K T+PTLAP HLQDLPGFTRSV K+DHA+ITPESHV Sbjct: 29 EGFCSAEPSAASGGCSGVRPPLYWKATNPTLAPAHLQDLPGFTRSVYKRDHALITPESHV 88 Query: 374 FSPLPNWTNTLGAYLISPALGAHFTMYLANMQDGSKSALPPKDVERLIFVVQGSTALSVE 553 FSPLP+W NTLGAYLISPA+GAHFTMYLA M DGSKSALPPK VERLIFV+QGS LS E Sbjct: 89 FSPLPDWINTLGAYLISPAIGAHFTMYLAKMHDGSKSALPPKGVERLIFVLQGSILLSEE 148 Query: 554 SRTTQSLLVDSYAYLPANMKHSVISDKPTTLVIFERRYTSIGDYQPDLVVGSTDKQPLLE 733 S T +LLVDSYAYLPANMKHSVISD+ TTLVIFERRYT+I Y PDL+VGSTDKQPLLE Sbjct: 149 SGNTHTLLVDSYAYLPANMKHSVISDEVTTLVIFERRYTTIEGYHPDLIVGSTDKQPLLE 208 Query: 734 TPGEVFELRKLLPTSLPYDFNIHIMDFQPGEYLNVKEVHYNQHGLLLLEGQGIYRLGNSW 913 TPGEVFELRKLLPTSLPYDFNIHIMDFQPGEYLNVKEVHYNQHGLLLLEGQGIYRLG+SW Sbjct: 209 TPGEVFELRKLLPTSLPYDFNIHIMDFQPGEYLNVKEVHYNQHGLLLLEGQGIYRLGDSW 268 Query: 914 YPVQAGDTIWMAPFVPQWYAALGKTKSRYLLYKDVNRNPLI 1036 YPVQ+GDTIWMAPFVPQWYAALGKTK+RYLLYKDVNR+PLI Sbjct: 269 YPVQSGDTIWMAPFVPQWYAALGKTKTRYLLYKDVNRDPLI 309
>AK073883:Os07g0495000 | Length = 309 Score = 488 bits (1256), Expect = e-138 Identities = 239/281 (85%), Positives = 253/281 (90%), Gaps = 4/281 (1%) Frame = +2 Query: 206 EGFCSAEPSNDGSQW----PPLYSKVTSPTLAPVHLQDLPGFTRSVLKKDHAVITPESHV 373 EGFCSAEPS PPLY K T+PTLAP HLQDLPGFTRSV K+DHA+ITPESHV Sbjct: 29 EGFCSAEPSAASGGCSGVRPPLYWKATNPTLAPAHLQDLPGFTRSVYKRDHALITPESHV 88 Query: 374 FSPLPNWTNTLGAYLISPALGAHFTMYLANMQDGSKSALPPKDVERLIFVVQGSTALSVE 553 FSPLP+W NTLGAYLISPA+GAHFTMYLA M DGSKSALPPK VERLIFV+QGS LS E Sbjct: 89 FSPLPDWINTLGAYLISPAIGAHFTMYLAKMHDGSKSALPPKGVERLIFVLQGSILLSEE 148 Query: 554 SRTTQSLLVDSYAYLPANMKHSVISDKPTTLVIFERRYTSIGDYQPDLVVGSTDKQPLLE 733 S T +LLVDSYAYLPANMKHSVISD+ TTLVIFERRYT+I Y PDL+VGSTDKQPLLE Sbjct: 149 SGNTHTLLVDSYAYLPANMKHSVISDEVTTLVIFERRYTTIEGYHPDLIVGSTDKQPLLE 208 Query: 734 TPGEVFELRKLLPTSLPYDFNIHIMDFQPGEYLNVKEVHYNQHGLLLLEGQGIYRLGNSW 913 TPGEVFELRKLLPTSLPYDFNIHIMDFQPGEYLNVKEVHYNQHGLLLLEGQGIYRLG+SW Sbjct: 209 TPGEVFELRKLLPTSLPYDFNIHIMDFQPGEYLNVKEVHYNQHGLLLLEGQGIYRLGDSW 268 Query: 914 YPVQAGDTIWMAPFVPQWYAALGKTKSRYLLYKDVNRNPLI 1036 YPVQ+GDTIWMAPFVPQWYAALGKTK+RYLLYKDVNR+PLI Sbjct: 269 YPVQSGDTIWMAPFVPQWYAALGKTKTRYLLYKDVNRDPLI 309
>AK060721:Os07g0495000 | Length = 309 Score = 488 bits (1256), Expect = e-138 Identities = 239/281 (85%), Positives = 253/281 (90%), Gaps = 4/281 (1%) Frame = +2 Query: 206 EGFCSAEPSNDGSQW----PPLYSKVTSPTLAPVHLQDLPGFTRSVLKKDHAVITPESHV 373 EGFCSAEPS PPLY K T+PTLAP HLQDLPGFTRSV K+DHA+ITPESHV Sbjct: 29 EGFCSAEPSAASGGCSGVRPPLYWKATNPTLAPAHLQDLPGFTRSVYKRDHALITPESHV 88 Query: 374 FSPLPNWTNTLGAYLISPALGAHFTMYLANMQDGSKSALPPKDVERLIFVVQGSTALSVE 553 FSPLP+W NTLGAYLISPA+GAHFTMYLA M DGSKSALPPK VERLIFV+QGS LS E Sbjct: 89 FSPLPDWINTLGAYLISPAIGAHFTMYLAKMHDGSKSALPPKGVERLIFVLQGSILLSEE 148 Query: 554 SRTTQSLLVDSYAYLPANMKHSVISDKPTTLVIFERRYTSIGDYQPDLVVGSTDKQPLLE 733 S T +LLVDSYAYLPANMKHSVISD+ TTLVIFERRYT+I Y PDL+VGSTDKQPLLE Sbjct: 149 SGNTHTLLVDSYAYLPANMKHSVISDEVTTLVIFERRYTTIEGYHPDLIVGSTDKQPLLE 208 Query: 734 TPGEVFELRKLLPTSLPYDFNIHIMDFQPGEYLNVKEVHYNQHGLLLLEGQGIYRLGNSW 913 TPGEVFELRKLLPTSLPYDFNIHIMDFQPGEYLNVKEVHYNQHGLLLLEGQGIYRLG+SW Sbjct: 209 TPGEVFELRKLLPTSLPYDFNIHIMDFQPGEYLNVKEVHYNQHGLLLLEGQGIYRLGDSW 268 Query: 914 YPVQAGDTIWMAPFVPQWYAALGKTKSRYLLYKDVNRNPLI 1036 YPVQ+GDTIWMAPFVPQWYAALGKTK+RYLLYKDVNR+PLI Sbjct: 269 YPVQSGDTIWMAPFVPQWYAALGKTKTRYLLYKDVNRDPLI 309
>AK111177: | Length = 964 Score = 32.3 bits (72), Expect = 0.81 Identities = 23/70 (32%), Positives = 37/70 (52%) Frame = +2 Query: 458 ANMQDGSKSALPPKDVERLIFVVQGSTALSVESRTTQSLLVDSYAYLPANMKHSVISDKP 637 A + D A P + L VQG ALSVE+R+TQSL ++A L A ++ V+ + Sbjct: 478 AEVDDAEAGAAPDTPSDELGLKVQGG-ALSVETRSTQSL--QAFARLEAALRDFVLLKRA 534 Query: 638 TTLVIFERRY 667 + ++ + Y Sbjct: 535 KSKLLPSKTY 544
>AK101628:Os02g0169000 | Length = 374 Score = 30.4 bits (67), Expect = 3.1 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -2 Query: 779 EKWVAASSIQIPLLEFQGGVAYLLNQQLDQVGN 681 +KW + + L+ F GGV+YLLNQ +D N Sbjct: 151 KKWGLSGNSSYVLIGFLGGVSYLLNQGVDVRAN 183
>AK120712:Os12g0608600 | Length = 387 Score = 30.0 bits (66), Expect = 4.0 Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Frame = +2 Query: 851 YNQHGLLLLEGQGIYRLGNSW--YPVQAGDTIWMAP-FVPQWYAA 976 YN+ G+++ +G+G++ W + V D +W+ +PQW A+ Sbjct: 169 YNKDGIVVYDGKGLFSAARVWWMFRVFGHDKVWVLDGGLPQWRAS 213
>AK101984:Os04g0577200 | Length = 479 Score = 30.0 bits (66), Expect = 4.0 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = -3 Query: 298 MHRCEGGTGDLRVERRPLGAIVGRFSRAEPLVGAGRRRDPEGSEHEKEEEVACG 137 M + E G G L +GA+VG R+ + AG+ + E SE E+EE + G Sbjct: 49 MMQAEKGGGGL------VGAVVGALRRSLVMCSAGKVGEEEDSEDEEEEGMEIG 96
>AK059102:Os12g0608600 | Length = 313 Score = 30.0 bits (66), Expect = 4.0 Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Frame = +2 Query: 851 YNQHGLLLLEGQGIYRLGNSW--YPVQAGDTIWMAP-FVPQWYAA 976 YN+ G+++ +G+G++ W + V D +W+ +PQW A+ Sbjct: 95 YNKDGIVVYDGKGLFSAARVWWMFRVFGHDKVWVLDGGLPQWRAS 139
>AK069677:Os05g0435700 | Length = 215 Score = 29.3 bits (64), Expect = 6.8 Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +2 Query: 743 EVFELRKLLPTSLPYDFNIHIMDFQPGEY-LNVKEVHYNQH 862 ++ ++R +LP P+ ++D++PGEY + +K V N + Sbjct: 73 DINQIRDILPHRFPFLLVDRVIDYKPGEYAVGIKNVTINDN 113 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 40,971,002 Number of extensions: 974832 Number of successful extensions: 2524 Number of sequences better than 10.0: 9 Number of HSP's gapped: 2519 Number of HSP's successfully gapped: 9 Length of query: 458 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 354 Effective length of database: 11,235,591 Effective search space: 3977399214 Effective search space used: 3977399214 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
