| Clone Name | FLbaf41i14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-D09, full insert sequence Length = 1335 Score = 769 bits (388), Expect = 0.0 Identities = 649/736 (88%) Strand = Plus / Plus Query: 305 gatttacctggcttcacacgtagtgtgttaaaaaaggatcatgctgtaataacaccagaa 364 |||||||||||||||||||||||||| | |||| |||||||||| | || |||||||| Sbjct: 258 gatttacctggcttcacacgtagtgtttacaaaagggatcatgctttgattacaccagag 317 Query: 365 agccatgtattcagtcctttacctaattggaccaacacgttaggagcatatttgattagt 424 |||||||||||||| ||||| ||| | |||| |||||| |||||||||||||| |||||| Sbjct: 318 agccatgtattcagccctttgcctgactggatcaacacattaggagcatatttaattagt 377 Query: 425 ccagctcttggcgcacacttcactatgtacttggcaaacatgcaagatggatcaaaatca 484 |||||| | || ||||| ||||| |||||| ||||||| ||||| ||||||||||||||| Sbjct: 378 ccagctatcggggcacatttcacaatgtacctggcaaaaatgcatgatggatcaaaatca 437 Query: 485 gccttaccaccgaaagatgttgaaaggcttatctttgtggttcaaggcagcactgcattg 544 ||| ||||||| |||| ||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 438 gccctaccaccaaaaggtgttgaaaggcttatctttgtactccaaggaagcattctattg 497 Query: 545 tctgtggagagcagaacaacccaatccctgttggtagactcttatgcttatcttcctgca 604 |||| |||||| | | ||||| | ||| |||| ||||||||||| |||||||||||| Sbjct: 498 tctgaggagagtgggaatacccatactctgctggtggactcttatgcctatcttcctgca 557 Query: 605 aacatgaagcactctgtgatatcagataaaccaaccactcttgtaatctttgagaggagg 664 |||||||| ||||||||||| |||||| || ||| || ||||||||||||||||||||| Sbjct: 558 aacatgaaacactctgtgatctcagatgaagtaactacccttgtaatctttgagaggagg 617 Query: 665 tacacatccattggggattaccaacctgatctagttgttggttcaacagataagcaaccc 724 |||||| |||||| || |||||| |||||||| ||||||| ||||| |||||||||||| Sbjct: 618 tacacaaccattgagggttaccatcctgatctcattgttggatcaactgataagcaaccc 677 Query: 725 ctccttgaaactccaggagaggtatttgaattgaggaagctgctacccacttctctacct 784 || |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 678 cttcttgaaaccccaggagaggtatttgagttgaggaagctgctacccacttctctgcct 737 Query: 785 tatgactttaatattcatataatggactttcagccaggcgagtatctcaatgtgaaggag 844 |||||||||||||| ||||||||||| |||||||| || || ||||| |||||||||||| Sbjct: 738 tatgactttaatatccatataatggattttcagcctggggaatatcttaatgtgaaggag 797 Query: 845 gttcattacaatcaacatgggctgctgcttttagagggacaaggaatatatcgattggga 904 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 798 gttcattacaatcaacatgggttgctgcttttagagggacaaggaatataccgattggga 857 Query: 905 aatagctggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctcaa 964 | |||||||| ||||||||| | || || |||||||||||||| || |||||||||||| Sbjct: 858 gacagctggtacccggtgcaatcaggggacaccatttggatggcaccgtttgtgcctcaa 917 Query: 965 tggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgtcaacagg 1024 ||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||| ||| Sbjct: 918 tggtacgctgcccttggaaaaaccaagacgaggtacttgctgtacaaagatgtcaatagg 977 Query: 1025 aatccactgatatgag 1040 ||||||||||||||| Sbjct: 978 gatccactgatatgag 993
>ref|NM_001066227.1| Oryza sativa (japonica cultivar-group) Os07g0495000 (Os07g0495000) mRNA, complete cds Length = 1459 Score = 761 bits (384), Expect = 0.0 Identities = 648/736 (88%) Strand = Plus / Plus Query: 305 gatttacctggcttcacacgtagtgtgttaaaaaaggatcatgctgtaataacaccagaa 364 |||||||||||||||||||||||||| | |||| |||||||||| | || |||||||| Sbjct: 279 gatttacctggcttcacacgtagtgtttacaaaagggatcatgctttgattacaccagag 338 Query: 365 agccatgtattcagtcctttacctaattggaccaacacgttaggagcatatttgattagt 424 |||||||||||||| ||||| ||| | |||| |||||| |||||||||||||| |||||| Sbjct: 339 agccatgtattcagccctttgcctgactggatcaacacattaggagcatatttaattagt 398 Query: 425 ccagctcttggcgcacacttcactatgtacttggcaaacatgcaagatggatcaaaatca 484 |||||| | || ||||| ||||| |||||| ||||||| ||||| ||||||||||||||| Sbjct: 399 ccagctatcggggcacatttcacaatgtacctggcaaaaatgcatgatggatcaaaatca 458 Query: 485 gccttaccaccgaaagatgttgaaaggcttatctttgtggttcaaggcagcactgcattg 544 ||| ||||||| |||| ||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 459 gccctaccaccaaaaggtgttgaaaggcttatctttgtactccaaggaagcattctattg 518 Query: 545 tctgtggagagcagaacaacccaatccctgttggtagactcttatgcttatcttcctgca 604 |||| |||||| | | ||||| | ||| |||| ||||||||||| |||||||||||| Sbjct: 519 tctgaggagagtgggaatacccatactctgctggtggactcttatgcctatcttcctgca 578 Query: 605 aacatgaagcactctgtgatatcagataaaccaaccactcttgtaatctttgagaggagg 664 |||||||| ||||||||||| |||||| || ||| || ||||||||||||||||||||| Sbjct: 579 aacatgaaacactctgtgatctcagatgaagtaactacccttgtaatctttgagaggagg 638 Query: 665 tacacatccattggggattaccaacctgatctagttgttggttcaacagataagcaaccc 724 |||||| |||||| || |||||| |||||||| ||||||| ||||| |||||||||||| Sbjct: 639 tacacaaccattgagggttaccatcctgatctcattgttggatcaactgataagcaaccc 698 Query: 725 ctccttgaaactccaggagaggtatttgaattgaggaagctgctacccacttctctacct 784 || |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 699 cttcttgaaaccccaggagaggtatttgagttgaggaagctgctacccacttctctgcct 758 Query: 785 tatgactttaatattcatataatggactttcagccaggcgagtatctcaatgtgaaggag 844 |||||||||||||| ||||||||||| |||||||| || || ||||| |||||||||||| Sbjct: 759 tatgactttaatatccatataatggattttcagcctggggaatatcttaatgtgaaggag 818 Query: 845 gttcattacaatcaacatgggctgctgcttttagagggacaaggaatatatcgattggga 904 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 819 gttcattacaatcaacatgggttgctgcttttagagggacaaggaatataccgattggga 878 Query: 905 aatagctggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctcaa 964 | |||||||| ||||||||| | || || |||||||||||||| || |||||||||||| Sbjct: 879 gacagctggtacccggtgcaatcaggggacaccatttggatggcaccgtttgtgcctcaa 938 Query: 965 tggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgtcaacagg 1024 ||||| ||||||||||| ||||||||| | |||||||||||||| ||||||||||| ||| Sbjct: 939 tggtacgctgcccttggaaaaaccaagacgaggtacttgctgtataaagatgtcaatagg 998 Query: 1025 aatccactgatatgag 1040 ||||||||||||||| Sbjct: 999 gatccactgatatgag 1014
>dbj|AK073883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H20, full insert sequence Length = 1459 Score = 761 bits (384), Expect = 0.0 Identities = 648/736 (88%) Strand = Plus / Plus Query: 305 gatttacctggcttcacacgtagtgtgttaaaaaaggatcatgctgtaataacaccagaa 364 |||||||||||||||||||||||||| | |||| |||||||||| | || |||||||| Sbjct: 280 gatttacctggcttcacacgtagtgtttacaaaagggatcatgctttgattacaccagag 339 Query: 365 agccatgtattcagtcctttacctaattggaccaacacgttaggagcatatttgattagt 424 |||||||||||||| ||||| ||| | |||| |||||| |||||||||||||| |||||| Sbjct: 340 agccatgtattcagccctttgcctgactggatcaacacattaggagcatatttaattagt 399 Query: 425 ccagctcttggcgcacacttcactatgtacttggcaaacatgcaagatggatcaaaatca 484 |||||| | || ||||| ||||| |||||| ||||||| ||||| ||||||||||||||| Sbjct: 400 ccagctatcggggcacatttcacaatgtacctggcaaaaatgcatgatggatcaaaatca 459 Query: 485 gccttaccaccgaaagatgttgaaaggcttatctttgtggttcaaggcagcactgcattg 544 ||| ||||||| |||| ||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 460 gccctaccaccaaaaggtgttgaaaggcttatctttgtactccaaggaagcattctattg 519 Query: 545 tctgtggagagcagaacaacccaatccctgttggtagactcttatgcttatcttcctgca 604 |||| |||||| | | ||||| | ||| |||| ||||||||||| |||||||||||| Sbjct: 520 tctgaggagagtgggaatacccatactctgctggtggactcttatgcctatcttcctgca 579 Query: 605 aacatgaagcactctgtgatatcagataaaccaaccactcttgtaatctttgagaggagg 664 |||||||| ||||||||||| |||||| || ||| || ||||||||||||||||||||| Sbjct: 580 aacatgaaacactctgtgatctcagatgaagtaactacccttgtaatctttgagaggagg 639 Query: 665 tacacatccattggggattaccaacctgatctagttgttggttcaacagataagcaaccc 724 |||||| |||||| || |||||| |||||||| ||||||| ||||| |||||||||||| Sbjct: 640 tacacaaccattgagggttaccatcctgatctcattgttggatcaactgataagcaaccc 699 Query: 725 ctccttgaaactccaggagaggtatttgaattgaggaagctgctacccacttctctacct 784 || |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 700 cttcttgaaaccccaggagaggtatttgagttgaggaagctgctacccacttctctgcct 759 Query: 785 tatgactttaatattcatataatggactttcagccaggcgagtatctcaatgtgaaggag 844 |||||||||||||| ||||||||||| |||||||| || || ||||| |||||||||||| Sbjct: 760 tatgactttaatatccatataatggattttcagcctggggaatatcttaatgtgaaggag 819 Query: 845 gttcattacaatcaacatgggctgctgcttttagagggacaaggaatatatcgattggga 904 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 820 gttcattacaatcaacatgggttgctgcttttagagggacaaggaatataccgattggga 879 Query: 905 aatagctggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctcaa 964 | |||||||| ||||||||| | || || |||||||||||||| || |||||||||||| Sbjct: 880 gacagctggtacccggtgcaatcaggggacaccatttggatggcaccgtttgtgcctcaa 939 Query: 965 tggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgtcaacagg 1024 ||||| ||||||||||| ||||||||| | |||||||||||||| ||||||||||| ||| Sbjct: 940 tggtacgctgcccttggaaaaaccaagacgaggtacttgctgtataaagatgtcaatagg 999 Query: 1025 aatccactgatatgag 1040 ||||||||||||||| Sbjct: 1000 gatccactgatatgag 1015
>dbj|AK060721.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F10, full insert sequence Length = 1323 Score = 761 bits (384), Expect = 0.0 Identities = 648/736 (88%) Strand = Plus / Plus Query: 305 gatttacctggcttcacacgtagtgtgttaaaaaaggatcatgctgtaataacaccagaa 364 |||||||||||||||||||||||||| | |||| |||||||||| | || |||||||| Sbjct: 246 gatttacctggcttcacacgtagtgtttacaaaagggatcatgctttgattacaccagag 305 Query: 365 agccatgtattcagtcctttacctaattggaccaacacgttaggagcatatttgattagt 424 |||||||||||||| ||||| ||| | |||| |||||| |||||||||||||| |||||| Sbjct: 306 agccatgtattcagccctttgcctgactggatcaacacattaggagcatatttaattagt 365 Query: 425 ccagctcttggcgcacacttcactatgtacttggcaaacatgcaagatggatcaaaatca 484 |||||| | || ||||| ||||| |||||| ||||||| ||||| ||||||||||||||| Sbjct: 366 ccagctatcggggcacatttcacaatgtacctggcaaaaatgcatgatggatcaaaatca 425 Query: 485 gccttaccaccgaaagatgttgaaaggcttatctttgtggttcaaggcagcactgcattg 544 ||| ||||||| |||| ||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 426 gccctaccaccaaaaggtgttgaaaggcttatctttgtactccaaggaagcattctattg 485 Query: 545 tctgtggagagcagaacaacccaatccctgttggtagactcttatgcttatcttcctgca 604 |||| |||||| | | ||||| | ||| |||| ||||||||||| |||||||||||| Sbjct: 486 tctgaggagagtgggaatacccatactctgctggtggactcttatgcctatcttcctgca 545 Query: 605 aacatgaagcactctgtgatatcagataaaccaaccactcttgtaatctttgagaggagg 664 |||||||| ||||||||||| |||||| || ||| || ||||||||||||||||||||| Sbjct: 546 aacatgaaacactctgtgatctcagatgaagtaactacccttgtaatctttgagaggagg 605 Query: 665 tacacatccattggggattaccaacctgatctagttgttggttcaacagataagcaaccc 724 |||||| |||||| || |||||| |||||||| ||||||| ||||| |||||||||||| Sbjct: 606 tacacaaccattgagggttaccatcctgatctcattgttggatcaactgataagcaaccc 665 Query: 725 ctccttgaaactccaggagaggtatttgaattgaggaagctgctacccacttctctacct 784 || |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 666 cttcttgaaaccccaggagaggtatttgagttgaggaagctgctacccacttctctgcct 725 Query: 785 tatgactttaatattcatataatggactttcagccaggcgagtatctcaatgtgaaggag 844 |||||||||||||| ||||||||||| |||||||| || || ||||| |||||||||||| Sbjct: 726 tatgactttaatatccatataatggattttcagcctggggaatatcttaatgtgaaggag 785 Query: 845 gttcattacaatcaacatgggctgctgcttttagagggacaaggaatatatcgattggga 904 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 786 gttcattacaatcaacatgggttgctgcttttagagggacaaggaatataccgattggga 845 Query: 905 aatagctggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctcaa 964 | |||||||| ||||||||| | || || |||||||||||||| || |||||||||||| Sbjct: 846 gacagctggtacccggtgcaatcaggggacaccatttggatggcaccgtttgtgcctcaa 905 Query: 965 tggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgtcaacagg 1024 ||||| ||||||||||| ||||||||| | |||||||||||||| ||||||||||| ||| Sbjct: 906 tggtacgctgcccttggaaaaaccaagacgaggtacttgctgtataaagatgtcaatagg 965 Query: 1025 aatccactgatatgag 1040 ||||||||||||||| Sbjct: 966 gatccactgatatgag 981
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 119 bits (60), Expect = 3e-23 Identities = 72/76 (94%) Strand = Plus / Plus Query: 840 aggaggttcattacaatcaacatgggctgctgcttttagagggacaaggaatatatcgat 899 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 18460400 aggaggttcattacaatcaacatgggttgctgcttttagagggacaaggaatataccgat 18460459 Query: 900 tgggaaatagctggta 915 ||||| | |||||||| Sbjct: 18460460 tgggagacagctggta 18460475 Score = 111 bits (56), Expect = 7e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 581 gactcttatgcttatcttcctgcaaacatgaagcactctgtgatatcagataaaccaacc 640 ||||||||||| |||||||||||||||||||| ||||||||||| |||||| || ||| Sbjct: 18458911 gactcttatgcctatcttcctgcaaacatgaaacactctgtgatctcagatgaagtaact 18458970 Query: 641 actcttgtaatctttgagaggaggtaca 668 || ||||||||||||||||||||||||| Sbjct: 18458971 acccttgtaatctttgagaggaggtaca 18458998 Score = 93.7 bits (47), Expect = 2e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 662 aggtacacatccattggggattaccaacctgatctagttgttggttcaacagataagcaa 721 ||||||||| |||||| || |||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 18459378 aggtacacaaccattgagggttaccatcctgatctcattgttggatcaactgataagcaa 18459437 Query: 722 cccctccttgaaactccaggagaggta 748 ||||| |||||||| |||||||||||| Sbjct: 18459438 ccccttcttgaaaccccaggagaggta 18459464 Score = 93.7 bits (47), Expect = 2e-15 Identities = 53/55 (96%) Strand = Plus / Plus Query: 744 aggtatttgaattgaggaagctgctacccacttctctaccttatgactttaatat 798 |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 18459776 aggtatttgagttgaggaagctgctacccacttctctgccttatgactttaatat 18459830 Score = 93.7 bits (47), Expect = 2e-15 Identities = 68/75 (90%) Strand = Plus / Plus Query: 966 ggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgtcaacagga 1025 |||| ||||||||||| ||||||||| | |||||||||||||| ||||||||||| ||| Sbjct: 18461047 ggtacgctgcccttggaaaaaccaagacgaggtacttgctgtataaagatgtcaataggg 18461106 Query: 1026 atccactgatatgag 1040 ||||||||||||||| Sbjct: 18461107 atccactgatatgag 18461121 Score = 89.7 bits (45), Expect = 2e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 304 agatttacctggcttcacacgtagtgtgttaaaaaaggatcatgctgtaataacaccaga 363 ||||||||||||||||||||||||||| | |||| |||||||||| | || |||||||| Sbjct: 18457279 agatttacctggcttcacacgtagtgtttacaaaagggatcatgctttgattacaccaga 18457338 Query: 364 aagccatgtattcagtccttt 384 |||||||||||||| ||||| Sbjct: 18457339 gagccatgtattcagcccttt 18457359 Score = 71.9 bits (36), Expect = 6e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 397 caacacgttaggagcatatttgattagtccagctcttggcgcacacttcactatgtactt 456 |||||| |||||||||||||| |||||||||||| | || ||||| ||||| |||||| | Sbjct: 18457451 caacacattaggagcatatttaattagtccagctatcggggcacatttcacaatgtacct 18457510 Query: 457 ggcaaacatgca 468 |||||| ||||| Sbjct: 18457511 ggcaaaaatgca 18457522 Score = 61.9 bits (31), Expect = 6e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 469 agatggatcaaaatcagccttaccaccgaaagatgttgaaagg 511 ||||||||||||||||||| ||||||| |||| |||||||||| Sbjct: 18457842 agatggatcaaaatcagccctaccaccaaaaggtgttgaaagg 18457884 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 912 ggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctcaatggt 968 |||| ||||||||| | || || |||||||||||||| || |||||||||||||||| Sbjct: 18460911 ggtacccggtgcaatcaggggacaccatttggatggcaccgtttgtgcctcaatggt 18460967 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cggcggcggccggcgccgacgaggg 210 |||||||||||| |||||||||||| Sbjct: 1638486 cggcggcggccgccgccgacgaggg 1638462
>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_B11 Length = 102824 Score = 119 bits (60), Expect = 3e-23 Identities = 72/76 (94%) Strand = Plus / Plus Query: 840 aggaggttcattacaatcaacatgggctgctgcttttagagggacaaggaatatatcgat 899 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 52248 aggaggttcattacaatcaacatgggttgctgcttttagagggacaaggaatataccgat 52307 Query: 900 tgggaaatagctggta 915 ||||| | |||||||| Sbjct: 52308 tgggagacagctggta 52323 Score = 111 bits (56), Expect = 7e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 581 gactcttatgcttatcttcctgcaaacatgaagcactctgtgatatcagataaaccaacc 640 ||||||||||| |||||||||||||||||||| ||||||||||| |||||| || ||| Sbjct: 50759 gactcttatgcctatcttcctgcaaacatgaaacactctgtgatctcagatgaagtaact 50818 Query: 641 actcttgtaatctttgagaggaggtaca 668 || ||||||||||||||||||||||||| Sbjct: 50819 acccttgtaatctttgagaggaggtaca 50846 Score = 93.7 bits (47), Expect = 2e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 662 aggtacacatccattggggattaccaacctgatctagttgttggttcaacagataagcaa 721 ||||||||| |||||| || |||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 51226 aggtacacaaccattgagggttaccatcctgatctcattgttggatcaactgataagcaa 51285 Query: 722 cccctccttgaaactccaggagaggta 748 ||||| |||||||| |||||||||||| Sbjct: 51286 ccccttcttgaaaccccaggagaggta 51312 Score = 93.7 bits (47), Expect = 2e-15 Identities = 53/55 (96%) Strand = Plus / Plus Query: 744 aggtatttgaattgaggaagctgctacccacttctctaccttatgactttaatat 798 |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 51624 aggtatttgagttgaggaagctgctacccacttctctgccttatgactttaatat 51678 Score = 93.7 bits (47), Expect = 2e-15 Identities = 68/75 (90%) Strand = Plus / Plus Query: 966 ggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgtcaacagga 1025 |||| ||||||||||| ||||||||| | |||||||||||||| ||||||||||| ||| Sbjct: 52895 ggtacgctgcccttggaaaaaccaagacgaggtacttgctgtataaagatgtcaataggg 52954 Query: 1026 atccactgatatgag 1040 ||||||||||||||| Sbjct: 52955 atccactgatatgag 52969 Score = 89.7 bits (45), Expect = 2e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 304 agatttacctggcttcacacgtagtgtgttaaaaaaggatcatgctgtaataacaccaga 363 ||||||||||||||||||||||||||| | |||| |||||||||| | || |||||||| Sbjct: 49127 agatttacctggcttcacacgtagtgtttacaaaagggatcatgctttgattacaccaga 49186 Query: 364 aagccatgtattcagtccttt 384 |||||||||||||| ||||| Sbjct: 49187 gagccatgtattcagcccttt 49207 Score = 71.9 bits (36), Expect = 6e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 397 caacacgttaggagcatatttgattagtccagctcttggcgcacacttcactatgtactt 456 |||||| |||||||||||||| |||||||||||| | || ||||| ||||| |||||| | Sbjct: 49299 caacacattaggagcatatttaattagtccagctatcggggcacatttcacaatgtacct 49358 Query: 457 ggcaaacatgca 468 |||||| ||||| Sbjct: 49359 ggcaaaaatgca 49370 Score = 61.9 bits (31), Expect = 6e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 469 agatggatcaaaatcagccttaccaccgaaagatgttgaaagg 511 ||||||||||||||||||| ||||||| |||| |||||||||| Sbjct: 49690 agatggatcaaaatcagccctaccaccaaaaggtgttgaaagg 49732 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 912 ggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctcaatggt 968 |||| ||||||||| | || || |||||||||||||| || |||||||||||||||| Sbjct: 52759 ggtacccggtgcaatcaggggacaccatttggatggcaccgtttgtgcctcaatggt 52815
>ref|NM_117809.4| Arabidopsis thaliana transcription factor (AT4G17050) mRNA, complete cds Length = 1151 Score = 93.7 bits (47), Expect = 2e-15 Identities = 188/235 (80%) Strand = Plus / Plus Query: 783 cttatgactttaatattcatataatggactttcagccaggcgagtatctcaatgtgaagg 842 |||||||||| || || |||| ||||| |||||||| || |||| ||| ||||| |||| Sbjct: 724 cttatgacttcaacatccatactatggattttcagcctggagagtttctgaatgttaagg 783 Query: 843 aggttcattacaatcaacatgggctgctgcttttagagggacaaggaatatatcgattgg 902 | |||||||| || || ||||| || ||||| | ||||| ||||| || ||||| |||| Sbjct: 784 aagttcattataaccagcatggtttgttgcttctggaggggcaaggcatttatcgcttgg 843 Query: 903 gaaatagctggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctc 962 | ||| ||||||||| || || || || ||| ||| |||||||| || ||||| |||| Sbjct: 844 gtgataactggtatccagttcaggctggtgatgtcatatggatggctccttttgtccctc 903 Query: 963 aatggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgt 1017 ||||||||||||| || || || || | |||| |||| ||| ||||||||||||| Sbjct: 904 aatggtatgctgcactcggaaagactaggtctcggtatttgttgtacaaagatgt 958
>dbj|AK176787.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-33-F14 Length = 1149 Score = 93.7 bits (47), Expect = 2e-15 Identities = 188/235 (80%) Strand = Plus / Plus Query: 783 cttatgactttaatattcatataatggactttcagccaggcgagtatctcaatgtgaagg 842 |||||||||| || || |||| ||||| |||||||| || |||| ||| ||||| |||| Sbjct: 732 cttatgacttcaacatccatactatggattttcagcctggagagtttctgaatgttaagg 791 Query: 843 aggttcattacaatcaacatgggctgctgcttttagagggacaaggaatatatcgattgg 902 | |||||||| || || ||||| || ||||| | ||||| ||||| || ||||| |||| Sbjct: 792 aagttcattataaccagcatggtttgttgcttctggaggggcaaggcatttatcgcttgg 851 Query: 903 gaaatagctggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctc 962 | ||| ||||||||| || || || || ||| ||| |||||||| || ||||| |||| Sbjct: 852 gtgataactggtatccagttcaggctggtgatgtcatatggatggctccttttgtccctc 911 Query: 963 aatggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgt 1017 ||||||||||||| || || || || | |||| |||| ||| ||||||||||||| Sbjct: 912 aatggtatgctgcactcggaaagactaggtctcggtatttgttgtacaaagatgt 966
>dbj|AK118019.1| Arabidopsis thaliana mRNA for (NM_117809) hypothetical protein; protein id: At4g17050.1 [Arabidopsis thaliana], complete cds, clone: RAFL19-23-J18 Length = 1097 Score = 93.7 bits (47), Expect = 2e-15 Identities = 188/235 (80%) Strand = Plus / Plus Query: 783 cttatgactttaatattcatataatggactttcagccaggcgagtatctcaatgtgaagg 842 |||||||||| || || |||| ||||| |||||||| || |||| ||| ||||| |||| Sbjct: 690 cttatgacttcaacatccatactatggattttcagcctggagagtttctgaatgttaagg 749 Query: 843 aggttcattacaatcaacatgggctgctgcttttagagggacaaggaatatatcgattgg 902 | |||||||| || || ||||| || ||||| | ||||| ||||| || ||||| |||| Sbjct: 750 aagttcattataaccagcatggtttgttgcttctggaggggcaaggcatttatcgcttgg 809 Query: 903 gaaatagctggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctc 962 | ||| ||||||||| || || || || ||| ||| |||||||| || ||||| |||| Sbjct: 810 gtgataactggtatccagttcaggctggtgatgtcatatggatggctccttttgtccctc 869 Query: 963 aatggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgt 1017 ||||||||||||| || || || || | |||| |||| ||| ||||||||||||| Sbjct: 870 aatggtatgctgcactcggaaagactaggtctcggtatttgttgtacaaagatgt 924
>emb|BX828474.1|CNS0A2AB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH93ZA05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 876 Score = 93.7 bits (47), Expect = 2e-15 Identities = 188/235 (80%) Strand = Plus / Plus Query: 783 cttatgactttaatattcatataatggactttcagccaggcgagtatctcaatgtgaagg 842 |||||||||| || || |||| ||||| |||||||| || |||| ||| ||||| |||| Sbjct: 461 cttatgacttcaacatccatactatggattttcagcctggagagtttctgaatgttaagg 520 Query: 843 aggttcattacaatcaacatgggctgctgcttttagagggacaaggaatatatcgattgg 902 | |||||||| || || ||||| || ||||| | ||||| ||||| || ||||| |||| Sbjct: 521 aagttcattataaccagcatggtttgttgcttctggaggggcaaggcatttatcgcttgg 580 Query: 903 gaaatagctggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctc 962 | ||| ||||||||| || || || || ||| ||| |||||||| || ||||| |||| Sbjct: 581 gtgataactggtatccagttcaggctggtgatgtcatatggatggcaccttttgtccctc 640 Query: 963 aatggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgt 1017 ||||||||||||| || || || || | |||| |||| ||| ||||||||||||| Sbjct: 641 aatggtatgctgcactcggaaagactaggtctcggtatttgttgtacaaagatgt 695
>dbj|AK175872.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-50-F22 Length = 1145 Score = 85.7 bits (43), Expect = 4e-13 Identities = 187/235 (79%) Strand = Plus / Plus Query: 783 cttatgactttaatattcatataatggactttcagccaggcgagtatctcaatgtgaagg 842 |||||||||| || || |||| |||| |||||||| || |||| ||| ||||| |||| Sbjct: 736 cttatgacttcaacatccatactatgggttttcagcctggagagtttctgaatgttaagg 795 Query: 843 aggttcattacaatcaacatgggctgctgcttttagagggacaaggaatatatcgattgg 902 | |||||||| || || ||||| || ||||| | ||||| ||||| || ||||| |||| Sbjct: 796 aagttcattataaccagcatggtttgttgcttctggaggggcaaggcatttatcgcttgg 855 Query: 903 gaaatagctggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctc 962 | ||| ||||||||| || || || || ||| ||| |||||||| || ||||| |||| Sbjct: 856 gtgataactggtatccagttcaggctggtgatgtcatatggatggctccttttgtccctc 915 Query: 963 aatggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgt 1017 ||||||||||||| || || || || | |||| |||| ||| ||||||||||||| Sbjct: 916 aatggtatgctgcactcggaaagactaggtctcggtatttgttgtacaaagatgt 970
>emb|BX826330.1|CNS0A3C8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB17ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1090 Score = 85.7 bits (43), Expect = 4e-13 Identities = 187/235 (79%) Strand = Plus / Plus Query: 783 cttatgactttaatattcatataatggactttcagccaggcgagtatctcaatgtgaagg 842 |||||||||| || || |||| ||||| |||||||| || |||| ||| ||||| |||| Sbjct: 724 cttatgacttcaacatccatactatggattttcagcctggagagtttctgaatgttaagg 783 Query: 843 aggttcattacaatcaacatgggctgctgcttttagagggacaaggaatatatcgattgg 902 | |||||||| || || ||||| || ||||| | ||||| ||||| || ||||| |||| Sbjct: 784 aagttcattataaccagcatggtttgttgcttctggaggggcaaggcatttatcgcttgg 843 Query: 903 gaaatagctggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctc 962 | || ||||||||| || || || || ||| ||| |||||||| || ||||| |||| Sbjct: 844 gtgattactggtatccagttcaggctggtgatgtcatatggatggctccttttgtccctc 903 Query: 963 aatggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgt 1017 ||||||||||||| || || || || | |||| |||| ||| ||||||||||||| Sbjct: 904 aatggtatgctgcactcggaaagactaggtctcggtatttgttgtacaaagatgt 958
>gb|AC182567.2| Mimulus guttatus clone MGBa-50E20, complete sequence Length = 158263 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 912 ggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctcaatggta 969 ||||||| || ||||| ||||| | |||||||||||||| ||||||||||||||||| Sbjct: 56267 ggtatccagttcaagctggcgacgcaatttggatggcgccctttgtgcctcaatggta 56324 Score = 58.0 bits (29), Expect = 9e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 966 ggtatgctgcccttggtaaaaccaagtctaggtacttgctgtacaaagatgtcaacagga 1025 |||||||||| ||||| || || ||||| | || ||||||||||||||||||||||||| Sbjct: 59933 ggtatgctgcacttggcaagacaaagtcgcgctatttgctgtacaaagatgtcaacagga 59992 Query: 1026 a 1026 | Sbjct: 59993 a 59993 Score = 52.0 bits (26), Expect = 0.005 Identities = 50/58 (86%) Strand = Plus / Plus Query: 912 ggtatccggtgcaagccggcgataccatttggatggcgccatttgtgcctcaatggta 969 ||||||| || ||||| || ||| | |||||||||||||| || |||||||||||||| Sbjct: 59783 ggtatccagttcaagctggtgatgcaatttggatggcgcccttcgtgcctcaatggta 59840 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1001 ttgctgtacaaagatgtcaacaggaa 1026 |||||||||||||||||||| ||||| Sbjct: 56690 ttgctgtacaaagatgtcaataggaa 56715
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Minus Query: 176 ctcggggtcgcggcggcggccggcgccg 203 ||||| |||||||||||||||||||||| Sbjct: 1329221 ctcggtgtcgcggcggcggccggcgccg 1329194
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Plus Query: 176 ctcggggtcgcggcggcggccggcgccg 203 ||||| |||||||||||||||||||||| Sbjct: 2130834 ctcggtgtcgcggcggcggccggcgccg 2130861
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Minus Query: 176 ctcggggtcgcggcggcggccggcgccg 203 ||||| |||||||||||||||||||||| Sbjct: 2242375 ctcggtgtcgcggcggcggccggcgccg 2242348
>emb|CR855170.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818E04, complete sequence Length = 146307 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Plus Query: 185 gcggcggcggccggcgccgacgagggg 211 |||||||||| |||||||||||||||| Sbjct: 137142 gcggcggcgggcggcgccgacgagggg 137168
>ref|XM_974308.1| PREDICTED: Mus musculus similar to solute carrier family 39 (zinc transporter), member 9, transcript variant 3 (LOC674308), mRNA Length = 7454 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 784 ttatgactttaatattcatataa 806 ||||||||||||||||||||||| Sbjct: 1720 ttatgactttaatattcatataa 1742
>gb|AC134537.3| Mus musculus BAC clone RP24-388M1 from chromosome 12, complete sequence Length = 221662 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 784 ttatgactttaatattcatataa 806 ||||||||||||||||||||||| Sbjct: 111926 ttatgactttaatattcatataa 111948
>dbj|AK014734.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833420E20 product:hypothetical ZIP Zinc transporter containing protein, full insert sequence Length = 2159 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 784 ttatgactttaatattcatataa 806 ||||||||||||||||||||||| Sbjct: 1420 ttatgactttaatattcatataa 1442
>dbj|AK014732.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833420C05 product:hypothetical DNA/RNA polymerases structure containing protein, full insert sequence Length = 2157 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 784 ttatgactttaatattcatataa 806 ||||||||||||||||||||||| Sbjct: 1420 ttatgactttaatattcatataa 1442
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Plus Query: 185 gcggcggcggccggcgccgacgagggg 211 |||||||||| |||||||||||||||| Sbjct: 22458223 gcggcggcgggcggcgccgacgagggg 22458249
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Plus Query: 185 gcggcggcggccggcgccgacgagggg 211 |||||||||| |||||||||||||||| Sbjct: 61978 gcggcggcgggcggcgccgacgagggg 62004
>emb|CR388221.20| Zebrafish DNA sequence from clone DKEY-18L16, complete sequence Length = 231980 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1234 actgtgatattcttttctcttt 1255 |||||||||||||||||||||| Sbjct: 94858 actgtgatattcttttctcttt 94879
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 183 tcgcggcggcggccggcgccga 204 |||||||||||||||||||||| Sbjct: 1768544 tcgcggcggcggccggcgccga 1768523
>emb|AL513317.11| Human DNA sequence from clone RP11-393P6 on chromosome 9, complete sequence Length = 142368 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 789 actttaatattcatataatgga 810 |||||||||||||||||||||| Sbjct: 15689 actttaatattcatataatgga 15710
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 188 gcggcggccggcgccgacgagg 209 |||||||||||||||||||||| Sbjct: 7847987 gcggcggccggcgccgacgagg 7847966
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 183 tcgcggcggcggccggcgccga 204 |||||||||||||||||||||| Sbjct: 37133 tcgcggcggcggccggcgccga 37112
>gb|AF320027.1|AF320027 Sorghum bicolor heme oxygenase 2 (HO2) mRNA, partial cds; nuclear gene for chloroplast product Length = 1444 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 148 cctcctcctccttctcgtgctc 169 |||||||||||||||||||||| Sbjct: 442 cctcctcctccttctcgtgctc 421
>emb|BX649198.6| Zebrafish DNA sequence from clone DKEY-18L1 in linkage group 9, complete sequence Length = 139896 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1234 actgtgatattcttttctcttt 1255 |||||||||||||||||||||| Sbjct: 85603 actgtgatattcttttctcttt 85624
>emb|BX663615.15| Zebrafish DNA sequence from clone DKEY-14B2 in linkage group 7, complete sequence Length = 212543 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1234 actgtgatattcttttctcttt 1255 |||||||||||||||||||||| Sbjct: 75878 actgtgatattcttttctcttt 75857
>gb|AF246459.1|AF246459 Mus musculus galactokinase gene, complete cds Length = 15424 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 ccgcaggccacctcctcctcct 159 |||||||||||||||||||||| Sbjct: 12817 ccgcaggccacctcctcctcct 12796
>emb|AL607108.17| Mouse DNA sequence from clone RP23-42F6 on chromosome 11, complete sequence Length = 202842 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 138 ccgcaggccacctcctcctcct 159 |||||||||||||||||||||| Sbjct: 21195 ccgcaggccacctcctcctcct 21216
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 5.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 177 tcggggtcgcggcggcggccggcgccgac 205 |||||| ||||||| |||||||||||||| Sbjct: 4402426 tcggggccgcggcgccggccggcgccgac 4402454
>gb|EF058453.1| Synthetic construct Saccharomyces cerevisiae clone FLH202563.01X YNL045W, complete sequence Length = 2016 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 471 atggatcaaaatcagccttaccacc 495 |||||||||| |||||||||||||| Sbjct: 1354 atggatcaaattcagccttaccacc 1330
>gb|AC186878.3| Pan troglodytes BAC clone CH251-633J4 from chromosome 4, complete sequence Length = 207766 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 ggccacctcctcctccttctc 163 ||||||||||||||||||||| Sbjct: 183741 ggccacctcctcctccttctc 183721
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 gcggcggcggccggcgccgac 205 ||||||||||||||||||||| Sbjct: 177456 gcggcggcggccggcgccgac 177476
>ref|NM_001074897.1| Oryza sativa (japonica cultivar-group) Os11g0644800 (Os11g0644800) mRNA, complete cds Length = 1482 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 gcggcggcggccggcgccgacgagg 209 ||||||||||||||||||| ||||| Sbjct: 211 gcggcggcggccggcgccggcgagg 235
>ref|NM_001071716.1| Oryza sativa (japonica cultivar-group) Os10g0539700 (Os10g0539700) mRNA, complete cds Length = 2783 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 gcggcggcggccggcgccgacgagg 209 |||||||||| |||||||||||||| Sbjct: 1627 gcggcggcgggcggcgccgacgagg 1651
>gb|AC182425.3| Pan troglodytes BAC clone CH251-737P14 from chromosome 9, complete sequence Length = 216726 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ggccacctcctcctccttctc 163 ||||||||||||||||||||| Sbjct: 22612 ggccacctcctcctccttctc 22632
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 cgcggcggcggccggcgccgacgag 208 |||||||||||| |||||||||||| Sbjct: 569079 cgcggcggcggcgggcgccgacgag 569103 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 cggcggcggccggcgccgacg 206 ||||||||||||||||||||| Sbjct: 6510948 cggcggcggccggcgccgacg 6510928
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 tcgcggcggcggccggcgccg 203 ||||||||||||||||||||| Sbjct: 334700 tcgcggcggcggccggcgccg 334720
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 gcggcggcggccggcgccgac 205 ||||||||||||||||||||| Sbjct: 560879 gcggcggcggccggcgccgac 560859
>ref|XM_601174.2| PREDICTED: Bos taurus similar to Periplakin (195 kDa cornified envelope precursor protein) (190 kDa paraneoplastic pemphigus antigen) (LOC522886), mRNA Length = 3255 Score = 42.1 bits (21), Expect = 5.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 135 ttcccgcaggccacctcctcctccttctc 163 ||||||| ||||| ||||||||||||||| Sbjct: 2015 ttcccgcgggccagctcctcctccttctc 1987
>gb|AY522806.1| Equine infectious anemia virus clone 2073env1i envelope protein gp90 (SU) mRNA, partial cds Length = 891 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1140 tccagagtatcaatgtaaaaa 1160 ||||||||||||||||||||| Sbjct: 525 tccagagtatcaatgtaaaaa 545
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 ggtcgcggcggcggccggcgc 201 ||||||||||||||||||||| Sbjct: 807911 ggtcgcggcggcggccggcgc 807931
>gb|AE013140.1| Thermoanaerobacter tengcongensis MB4, section 167 of 244 of the complete genome Length = 12070 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1143 agagtatcaatgtaaaaataa 1163 ||||||||||||||||||||| Sbjct: 7165 agagtatcaatgtaaaaataa 7185
>gb|AY165770.1| Notaeolidia depressa 18S ribosomal RNA gene, complete sequence Length = 1940 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 cctcggggtcgcggcggcggccggc 199 |||||||||||||||||||| |||| Sbjct: 1512 cctcggggtcgcggcggcgggcggc 1488
>gb|AC146571.13| Medicago truncatula clone mth2-104a2, complete sequence Length = 140639 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1149 tcaatgtaaaaataataatgt 1169 ||||||||||||||||||||| Sbjct: 40387 tcaatgtaaaaataataatgt 40407
>gb|AC102392.8| Mus musculus chromosome 3, clone RP24-122I22, complete sequence Length = 201067 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 aaccaacccctcctcccctcc 78 ||||||||||||||||||||| Sbjct: 49554 aaccaacccctcctcccctcc 49574
>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0090F16, complete sequence Length = 147341 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 gcggcggcggccggcgccgacgagg 209 ||||||||||||||||||| ||||| Sbjct: 76175 gcggcggcggccggcgccggcgagg 76199
>gb|AF520587.1| Drosophila melanogaster ninja transposon, hobo-related transposon and hoppel transposon sequence Length = 5519 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 286 cgcacctgtgcatttgcaagattta 310 ||||||| ||||||||||||||||| Sbjct: 2758 cgcacctttgcatttgcaagattta 2734
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ggcggcggccggcgccgacga 207 ||||||||||||||||||||| Sbjct: 835646 ggcggcggccggcgccgacga 835626
>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete sequence Length = 249943 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1151 aatgtaaaaataataatgtca 1171 ||||||||||||||||||||| Sbjct: 67035 aatgtaaaaataataatgtca 67055
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 gcggcggcggccggcgccgacgagg 209 ||||||||||||||||||| ||||| Sbjct: 24746313 gcggcggcggccggcgccggcgagg 24746289
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 gcggcggcggccggcgccgacgagg 209 |||||||||| |||||||||||||| Sbjct: 20518693 gcggcggcgggcggcgccgacgagg 20518717
>emb|AL953889.9| Human DNA sequence from clone RP11-7G23 on chromosome 9 Contains six novel pseudogenes, the FAM27A gene for family with sequence similarity 27, member A, a novel gene and five CpG islands, complete sequence Length = 160730 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ggccacctcctcctccttctc 163 ||||||||||||||||||||| Sbjct: 75342 ggccacctcctcctccttctc 75362
>emb|AL935212.11| Human DNA sequence from clone RP11-160N1 on chromosome 9 Contains eight novel pseudogenes, two novel genes and three CpG islands, complete sequence Length = 181647 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ggccacctcctcctccttctc 163 ||||||||||||||||||||| Sbjct: 140749 ggccacctcctcctccttctc 140769
>emb|BX005037.5| Human DNA sequence from clone RP11-34H11 on chromosome 9 Contains two CpG islands, complete sequence Length = 173181 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 ggccacctcctcctccttctc 163 ||||||||||||||||||||| Sbjct: 80664 ggccacctcctcctccttctc 80644
>emb|AL627230.15| Human DNA sequence from clone RP11-12A20 on chromosome 9 Contains six novel pseudogenes, the FAM27B gene for family with sequence similarity 27, member B, a pseudogene similar to part of ribosomal protein L10 (RPL10) and four CpG islands, complete sequence Length = 194246 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ggccacctcctcctccttctc 163 ||||||||||||||||||||| Sbjct: 83403 ggccacctcctcctccttctc 83423
>emb|AL591926.8| Human DNA sequence from clone RP11-157L3 on chromosome 9 Contains five novel pseudogenes, a pseudogene similar to part of ribosomal protein L10 (RPL10) and two CpG islands, complete sequence Length = 182366 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ggccacctcctcctccttctc 163 ||||||||||||||||||||| Sbjct: 92498 ggccacctcctcctccttctc 92518
>emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chromosome 9 Contains the FAM27C gene for family with sequence similarity 27, member C, three novel genes, five novel pseudogenes and six CpG islands, complete sequence Length = 202081 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ggccacctcctcctccttctc 163 ||||||||||||||||||||| Sbjct: 155615 ggccacctcctcctccttctc 155635
>emb|AL162731.33| Human DNA sequence from clone RP11-292F9 on chromosome 9 Contains four novel genes, three novel pseudogenes and two CpG islands, complete sequence Length = 188062 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ggccacctcctcctccttctc 163 ||||||||||||||||||||| Sbjct: 113946 ggccacctcctcctccttctc 113966
>gb|AC117257.4| Mus musculus BAC clone RP24-484F21 from chromosome 17, complete sequence Length = 187399 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 tcccgcaggccacctcctcct 156 ||||||||||||||||||||| Sbjct: 170579 tcccgcaggccacctcctcct 170599
>gb|AC008758.7| Homo sapiens chromosome 19 clone CTD-3105H18, complete sequence Length = 224573 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 ttccaaccaacccctcctccc 74 ||||||||||||||||||||| Sbjct: 121440 ttccaaccaacccctcctccc 121460
>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete sequence Length = 142114 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 gcggcggcggccggcgccgacgagg 209 |||||||||| |||||||||||||| Sbjct: 23983 gcggcggcgggcggcgccgacgagg 24007
>emb|Z71321.1|SCYNL045W S.cerevisiae chromosome XIV reading frame ORF YNL045w Length = 2578 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 471 atggatcaaaatcagccttaccacc 495 |||||||||| |||||||||||||| Sbjct: 1494 atggatcaaattcagccttaccacc 1470
>emb|X94547.1|SC128LXIV S.cerevisiae 12.8 kb DNA from left arm of chromosome XIV Length = 12857 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 471 atggatcaaaatcagccttaccacc 495 |||||||||| |||||||||||||| Sbjct: 8038 atggatcaaattcagccttaccacc 8014
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 cgcggcggcggccggcgccga 204 ||||||||||||||||||||| Sbjct: 3069044 cgcggcggcggccggcgccga 3069024
>dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0088O14 Length = 179483 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cggcggcggccggcgccgacgaggg 210 |||||||||||| |||||||||||| Sbjct: 107141 cggcggcggccgccgccgacgaggg 107117
>dbj|AK120628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153C17, full insert sequence Length = 2784 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 gcggcggcggccggcgccgacgagg 209 |||||||||| |||||||||||||| Sbjct: 1628 gcggcggcgggcggcgccgacgagg 1652
>dbj|AK068045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135M14, full insert sequence Length = 2658 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cggcggcggccggcgccgacgaggg 210 |||||||||||| |||||||||||| Sbjct: 237 cggcggcggccgccgccgacgaggg 213
>dbj|AK066085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050A21, full insert sequence Length = 2360 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cggcggcggccggcgccgacgaggg 210 |||||||||||| |||||||||||| Sbjct: 240 cggcggcggccgccgccgacgaggg 216
>dbj|AK060557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D11, full insert sequence Length = 2744 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 gcggcggcggccggcgccgacgagg 209 ||||||||||||||||||| ||||| Sbjct: 1332 gcggcggcggccggcgccggcgagg 1356
>emb|AJ335242.1|HSA335242 Homo sapiens genomic sequence surrounding NotI site, clone NR1-EC23C Length = 642 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ggccacctcctcctccttctc 163 ||||||||||||||||||||| Sbjct: 543 ggccacctcctcctccttctc 563
>dbj|AP004301.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0483E09 Length = 69300 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cggcggcggccggcgccgacgaggg 210 |||||||||||| |||||||||||| Sbjct: 47639 cggcggcggccgccgccgacgaggg 47615
>emb|BX005039.11| Mouse DNA sequence from clone RP23-391M18 on chromosome 2, complete sequence Length = 145263 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1156 aaaaataataatgtcatatga 1176 ||||||||||||||||||||| Sbjct: 115727 aaaaataataatgtcatatga 115707
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 5.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 177 tcggggtcgcggcggcggccggcgccgac 205 |||||| ||||||| |||||||||||||| Sbjct: 3796620 tcggggccgcggcgccggccggcgccgac 3796648
>emb|X62841.1|RRPCP2858 R.rattus mRNA for potassium channel protein (2858 bp) Length = 2858 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ccacctcctcctccttctcgt 165 ||||||||||||||||||||| Sbjct: 288 ccacctcctcctccttctcgt 308
>gb|AC111082.23| Mus musculus chromosome 17, clone RP23-140I9, complete sequence Length = 171550 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 tcccgcaggccacctcctcct 156 ||||||||||||||||||||| Sbjct: 19010 tcccgcaggccacctcctcct 19030
>gb|AC140674.4| Mus musculus BAC clone RP23-368L9 from 3, complete sequence Length = 212854 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 aaccaacccctcctcccctcc 78 ||||||||||||||||||||| Sbjct: 29859 aaccaacccctcctcccctcc 29879
>emb|AL118524.25|HSJ1059A9 Human DNA sequence from clone RP5-1059A9 on chromosome 9. Contains two putative novel genes, ESTs, STSs and GSSs, complete sequence Length = 99858 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 ggccacctcctcctccttctc 163 ||||||||||||||||||||| Sbjct: 33555 ggccacctcctcctccttctc 33535 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 249,987,102 Number of extensions: 14791421 Number of successful extensions: 443084 Number of sequences better than 10.0: 82 Number of HSP's gapped: 443084 Number of HSP's successfully gapped: 107 Length of query: 1374 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1351 Effective length of database: 18,503,978,556 Effective search space: 24998875029156 Effective search space used: 24998875029156 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)