ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf47m13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK100974:Os09g0114500 32 1.3
2AK067738:Os09g0114500 32 1.3
3AK058665:Os09g0114500 32 1.3
4Os04g0436000:Os04g0436000 32 2.2
5AK102747:Os07g0607300 31 2.8
6AK121466:Os08g0542800 30 8.2

>AK100974:Os09g0114500 |
          Length = 1035
 Score = 32.3 bits (72), Expect = 1.3
 Identities = 23/81 (28%), Positives = 40/81 (49%)
 Frame = +1

Query: 631 SQILNMREKKKQLPKAIAEAQKAVDEAGKKIEEAVLAGGTVQEIKHQDENVQGMDIDGAG 810
           +QIL++++K++   + + E QK+ DEA KK++E       +  IK Q   +Q        
Sbjct: 585 AQILDLKKKQENQVQLLKEKQKS-DEAAKKLQE------EIHSIKAQKVQLQ-------- 629

Query: 811 TLFWELHKLKAELRSTIQWES 873
                 HK+K E     QW++
Sbjct: 630 ------HKIKQEAEQFRQWKA 644



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>AK067738:Os09g0114500 |
          Length = 999

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 23/81 (28%), Positives = 40/81 (49%)
 Frame = +1

Query: 631 SQILNMREKKKQLPKAIAEAQKAVDEAGKKIEEAVLAGGTVQEIKHQDENVQGMDIDGAG 810
           +QIL++++K++   + + E QK+ DEA KK++E       +  IK Q   +Q        
Sbjct: 549 AQILDLKKKQENQVQLLKEKQKS-DEAAKKLQE------EIHSIKAQKVQLQ-------- 593

Query: 811 TLFWELHKLKAELRSTIQWES 873
                 HK+K E     QW++
Sbjct: 594 ------HKIKQEAEQFRQWKA 608



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>AK058665:Os09g0114500 |
          Length = 578

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 23/81 (28%), Positives = 40/81 (49%)
 Frame = +1

Query: 631 SQILNMREKKKQLPKAIAEAQKAVDEAGKKIEEAVLAGGTVQEIKHQDENVQGMDIDGAG 810
           +QIL++++K++   + + E QK+ DEA KK++E       +  IK Q   +Q        
Sbjct: 128 AQILDLKKKQENQVQLLKEKQKS-DEAAKKLQE------EIHSIKAQKVQLQ-------- 172

Query: 811 TLFWELHKLKAELRSTIQWES 873
                 HK+K E     QW++
Sbjct: 173 ------HKIKQEAEQFRQWKA 187



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>Os04g0436000:Os04g0436000 |
          Length = 298

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 9/83 (10%)
 Frame = +1

Query: 673 KAIAEAQKAVDEAGKKIEEAVLAGGTVQEIKHQDENVQGMDIDGAGTL---------FWE 825
           +A ++A +  +E GKK EEA  A     E+   D +  G D  G G            WE
Sbjct: 117 EATSDAGRREEEEGKKEEEATAAAAATGELSRGDGDEDGGDHGGGGAARDKEEKMDQLWE 176

Query: 826 LHKLKAELRSTIQWESGPHPVDD 894
                 ELR  +    G  P  D
Sbjct: 177 --NFNEELRQALHQRVGSCPRAD 197



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>AK102747:Os07g0607300 |
          Length = 636

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = +1

Query: 1021 CKTHVTPDLDVHVSYRVDHIRQVIAPENIEKLVLRLPLFYMSMTLYPFTWSTTNKISGFE 1200
            C+  +TP   V     VD I  V+ PE+ EK V  LP   M    + F   + NK   F+
Sbjct: 221  CEVFITPYSQVISVECVDDIATVLTPEHYEKCVNTLPNSSMVGIRFCFRQYSKNKFKRFD 280

Query: 1201 V 1203
            +
Sbjct: 281  L 281



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>AK121466:Os08g0542800 |
          Length = 92

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 425 CFCLMNTAACDVAGANVNLANSSMSGVGHNSS 330
           CFC +N   C +  A++ +AN  +SG+  +SS
Sbjct: 6   CFCSLNEPECLIVSAHLQMANFVLSGMVVDSS 37


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 51,932,386
Number of extensions: 1086603
Number of successful extensions: 2578
Number of sequences better than 10.0: 6
Number of HSP's gapped: 2572
Number of HSP's successfully gapped: 6
Length of query: 669
Length of database: 15,399,855
Length adjustment: 107
Effective length of query: 562
Effective length of database: 11,115,468
Effective search space: 6246893016
Effective search space used: 6246893016
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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