ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf47k18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os07g0204100:Os07g0204100 172 6e-43
2AK070959:Os03g0806600 126 4e-29
3Os11g0442500:Os11g0442500 32 0.71
4AK101156:Os06g0179200 32 0.92
5AK063102:Os02g0551600 31 1.6
6AK108190:Os11g0153500 31 2.1
7AK122074:Os06g0634600 30 2.7
8AK064565:Os07g0298900 30 2.7
9AK109978: 30 3.5
10AK105531:Os06g0704500 30 3.5
11AK099385:Os12g0481100 30 3.5
12AK073151:Os12g0481100 30 3.5
13AK103326:Os01g0111900 30 4.6
14Os03g0705700:Os03g0705700 29 6.0
15Os03g0602600:Os03g0602600 29 6.0
16AY341859:Os03g0758000 29 6.0
17AK068978:Os07g0240200 29 6.0
18AK060370:Os03g0125900 29 6.0
19Os02g0604000:Os02g0604000 29 6.0
20AK109286:Os02g0251900 29 7.8
21AK102985:Os03g0271800 29 7.8
22AK101620:Os12g0152900 29 7.8

>Os07g0204100:Os07g0204100 |
          Length = 229
 Score =  172 bits (435), Expect = 6e-43
 Identities = 123/265 (46%), Positives = 141/265 (53%), Gaps = 13/265 (4%)
 Frame = +2

Query: 197 MEGGGAP------SVQDVWDWEVLPDEHRSFYAESRAASRAHGSG----EVLADHETEEP 346
           ME GGA       +  D+WDWEVLPD+          +S +HG G     VL   ETEE 
Sbjct: 1   MEKGGASVSMDAAASMDMWDWEVLPDQ---------LSSSSHGGGGHGRRVLGAQETEES 51

Query: 347 ILPPPSQVDAGNVDECKDIGVDVVPAEPRSTKEGKDEEPTVTELLVSDGDGQDKFQACDD 526
            L   +  D    DECKDIGVDV  A P  TK  ++E        V++ + ++ FQ   D
Sbjct: 52  NLDAAA-ADMAVDDECKDIGVDV--AVPAETKTSQEETMAAK---VTEEEEEEAFQG-SD 104

Query: 527 AKEVD--DDGKQMAAAEAVESALXXXXXXXXXXXXXXXXXXXXXXXCVVFSVGKLRVNAV 700
           AK VD  DDG      E  E                          CVVF VGKLRVN +
Sbjct: 105 AKVVDGDDDGGGEEEEEEEEEG------------------KKAGAECVVFRVGKLRVNGI 146

Query: 701 GALCSFGVAAA-TVCVFLVGGRXXXXXXXXXXXXXXXXXXFLGDDKRIQQVVQQTSRLNQ 877
           GALCSFGVAAA TVCVFLVGGR                    GDDKR+QQVVQQTSRLNQ
Sbjct: 147 GALCSFGVAAAATVCVFLVGGRLQHHHRQQQQHKIQLQ--LYGDDKRMQQVVQQTSRLNQ 204

Query: 878 AMSSMMGAGASTRANISFGGFYDGF 952
           AMSS+MG G STRANISFGG+Y+GF
Sbjct: 205 AMSSVMGGGGSTRANISFGGYYEGF 229



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>AK070959:Os03g0806600 |
          Length = 229

 Score =  126 bits (316), Expect = 4e-29
 Identities = 99/243 (40%), Positives = 134/243 (55%), Gaps = 4/243 (1%)
 Frame = +2

Query: 236 DWEVLPDEHRSFYAESRAASRAHGSGEVLADHETEEPILPP--PSQVDAGN-VDECKDIG 406
           +WE+LPD   S++ E   +   HG+   + D ET+   LP     +V  G+ V + KDI 
Sbjct: 15  EWELLPDNKSSYFMEEFTSD--HGT---VVDDETKNIFLPIHLSEEVYVGDPVIKFKDI- 68

Query: 407 VDVVPAEPRSTKEGKDEEPTVTELLVSDGDGQDKFQACDDAKEVD-DDGKQMAAAEAVES 583
            DVV  E  S +E  +  P VTE+  ++ + +   ++   A+EVD DD  ++ A  A + 
Sbjct: 69  -DVVKIE--SYRE--EFVPKVTEIFDAEEEAE-MIKSPVSAEEVDVDDDDEVMAMVAPDQ 122

Query: 584 ALXXXXXXXXXXXXXXXXXXXXXXXCVVFSVGKLRVNAVGALCSFGVAAATVCVFLVGGR 763
            +                          FSVGKLRVN VGALCSFGVAAAT+C+FL+GGR
Sbjct: 123 CVEEEEGAQKDKEHNG------------FSVGKLRVNGVGALCSFGVAAATLCIFLLGGR 170

Query: 764 XXXXXXXXXXXXXXXXXXFLGDDKRIQQVVQQTSRLNQAMSSMMGAGASTRANISFGGFY 943
                                D++RIQQVVQQ SRLNQA+S++MG GASTRA+ISFGG+Y
Sbjct: 171 ---QQQLHKTQNQKTPFQMYADNERIQQVVQQASRLNQAVSTVMG-GASTRASISFGGYY 226

Query: 944 DGF 952
           DGF
Sbjct: 227 DGF 229



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>Os11g0442500:Os11g0442500 |
          Length = 858

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -2

Query: 287 PCSRRRSSCVRQAAPPSPTRPGRKERLL--PPWQTNRRTQPQRL 162
           PC +R++ C +     + T   +  RLL  PP Q+ RRT P+ +
Sbjct: 176 PCRKRKAPCAKARGKDAATTIAKVLRLLSAPPLQSRRRTSPETM 219



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>AK101156:Os06g0179200 |
          Length = 567

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 323 ADHETEEPILPPPSQVDAGNVDECKDIGVDVVPAEPRSTKEGKDEEP 463
           ADH+  E +LP  S  + GN+++   + +D++ AE     + K   P
Sbjct: 285 ADHDHTESLLPSSSASNLGNIEDDDSMDIDILLAEGEGAIKQKRRRP 331



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>AK063102:Os02g0551600 |
          Length = 216

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
 Frame = +3

Query: 201 REEALLPSRTCGTGRCCL---TNTGASTPRAGLHPVPTAAA---RFLPITKPRNRSCLPR 362
           R   LLPS   G G       TN+ +S+P     P PT+ +   RFLP   P   S +P 
Sbjct: 23  RRRRLLPSSAGGGGSSSSFSSTNSSSSSPFVSFLPPPTSPSPFHRFLP--SPLRASSVP- 79

Query: 363 HKWTL---VMLTSVRTSASTSCRPSP 431
             W     +  T  R+S S+S +P P
Sbjct: 80  FSWEHRPGIPKTPARSSRSSSKQPPP 105



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>AK108190:Os11g0153500 |
          Length = 291

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 443 EGKDEEPTV-TELLVSDGDGQDKFQACDDAKEVDDDGKQMAAAEAVESA 586
           EG   E TV  + +V DGDG       D   +VDDD   +AAA A + A
Sbjct: 142 EGLGSESTVDADDMVKDGDGSGA--VVDSGMDVDDDASDVAAAVAGDDA 188



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>AK122074:Os06g0634600 |
          Length = 451

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 34/108 (31%), Positives = 42/108 (38%)
 Frame = +2

Query: 263 RSFYAESRAASRAHGSGEVLADHETEEPILPPPSQVDAGNVDECKDIGVDVVPAEPRSTK 442
           RSFY    A   A  +    AD    +P  PPP+   A + DE   +G            
Sbjct: 49  RSFY--DSADGDASAAAADAADPPPRQPPPPPPASDGADSDDEDYVVG------------ 94

Query: 443 EGKDEEPTVTELLVSDGDGQDKFQACDDAKEVDDDGKQMAAAEAVESA 586
            G DE+    E  V DGDG           E DDD  + AA  A E+A
Sbjct: 95  -GGDEDQD-DEDYVGDGDGDG---------EGDDDDDEDAALAAEEAA 131



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>AK064565:Os07g0298900 |
          Length = 418

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
 Frame = +2

Query: 332 ETEEPILPP---PSQVDAGNVDECKDIGVDVVPAEPRSTKEGKDEEPTVTELLVSDGDGQ 502
           E + P+ PP   P +VD  N  E   +     PAE   TK+G D  P+       +G+  
Sbjct: 224 EPQHPLPPPSESPPKVDDDN--EPPKVAGSTEPAEEEETKQGGDPSPSDDAQEKKEGEEA 281

Query: 503 DKFQACDDAKEVDDDGKQ 556
           D+ +  D  +E ++  K+
Sbjct: 282 DQMK--DQKEEPEEKEKK 297



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>AK109978: |
          Length = 978

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 10/137 (7%)
 Frame = +2

Query: 206 GGAPSVQDVWDWEVLPDEHRSFYAESRAASRAHGSGEVLADHETEEPILPPPSQVDAGNV 385
           G  PS  D  D+E   DE      E           ++ +D E +        + D   +
Sbjct: 549 GLKPSYFDAADFEDSSDEDEDDEDEEEEMDE-DDVADIGSDAEDDASDSEDDDEADVIEM 607

Query: 386 DECKDIGVDVVPAEPRSTKEGKDEEPTVTELLVSDG----------DGQDKFQACDDAKE 535
           DE  D   D  P++ +++K        V  L +S G          D  D+  + D   +
Sbjct: 608 DEDSDSEADAAPSKSKTSK--------VPSLALSGGFSWSAGAGDDDAADELDSSDSDSD 659

Query: 536 VDDDGKQMAAAEAVESA 586
            D D +  AAA   E A
Sbjct: 660 SDSDSESKAAALKKEKA 676



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>AK105531:Os06g0704500 |
          Length = 409

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
 Frame = -2

Query: 359 GEAGSVPRFRDRQEPRRCRGHGMQPCSRRRSSCVRQAAPPSPTRPGRKERL------LPP 198
           G    +P    ++ P +C      P    ++ C  QA PP+  RPG +  L      LP 
Sbjct: 201 GRWNCIPGAPAQRPPAQCAAAAAHPFDCSKAQC--QATPPTTRRPGGRTPLAPHRSPLPH 258

Query: 197 WQTNRRTQP 171
               RRT P
Sbjct: 259 HMPPRRTPP 267



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>AK099385:Os12g0481100 |
          Length = 833

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 41/175 (23%), Positives = 63/175 (36%), Gaps = 29/175 (16%)
 Frame = +2

Query: 146 FRFDPLAFAVASVDLSAMEGGGAPSVQDVWDWEVLPDEHRSFYAESRAASRAHGSGEVLA 325
           FRFDP          SA  G   P+ Q  W++    +   + +A  R  S      + L+
Sbjct: 36  FRFDPDGSDDDGAAASAAAGRRKPA-QSPWEFSSYAESVAAEHARRRTTSIDEKISQALS 94

Query: 326 --------------------DHETEEPILPPPSQVDAGNVD---------ECKDIGVDVV 418
                               D E E+       +V  G +D         E  D GV+V 
Sbjct: 95  GSRRGGKPSIPDGDSEGDEDDSEVEDDSEEDDKEVVEGEIDDEEDEVEESEDDDEGVEVS 154

Query: 419 PAEPRSTKEGKDEEPTVTELLVSDGDGQDKFQACDDAKEVDDDGKQMAAAEAVES 583
             E    +EGK EE +     V +G+     +  D  +E  ++G + AA E  E+
Sbjct: 155 DEEVEELEEGKGEEKSDE---VEEGE-----EGQDGEEEEKEEGDEEAAEEEEET 201



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>AK073151:Os12g0481100 |
          Length = 832

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 41/175 (23%), Positives = 63/175 (36%), Gaps = 29/175 (16%)
 Frame = +2

Query: 146 FRFDPLAFAVASVDLSAMEGGGAPSVQDVWDWEVLPDEHRSFYAESRAASRAHGSGEVLA 325
           FRFDP          SA  G   P+ Q  W++    +   + +A  R  S      + L+
Sbjct: 35  FRFDPDGSDDDGAAASAAAGRRKPA-QSPWEFSSYAESVAAEHARRRTTSIDEKISQALS 93

Query: 326 --------------------DHETEEPILPPPSQVDAGNVD---------ECKDIGVDVV 418
                               D E E+       +V  G +D         E  D GV+V 
Sbjct: 94  GSRRGGKPSIPDGDSEGDEDDSEVEDDSEEDDKEVVEGEIDDEEDEVEESEDDDEGVEVS 153

Query: 419 PAEPRSTKEGKDEEPTVTELLVSDGDGQDKFQACDDAKEVDDDGKQMAAAEAVES 583
             E    +EGK EE +     V +G+     +  D  +E  ++G + AA E  E+
Sbjct: 154 DEEVEELEEGKGEEKSDE---VEEGE-----EGQDGEEEEKEEGDEEAAEEEEET 200



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>AK103326:Os01g0111900 |
          Length = 212

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 21/70 (30%), Positives = 26/70 (37%)
 Frame = -2

Query: 377 QRPLVTGEAGSVPRFRDRQEPRRCRGHGMQPCSRRRSSCVRQAAPPSPTRPGRKERLLPP 198
           +R   T    +  R R     R CR     P SRRR    R+     PTR     R    
Sbjct: 124 RRRATTRRPATTRRRRGGSRRRTCR-----PTSRRRGRSTRRTPASGPTRRRAAPRRGAR 178

Query: 197 WQTNRRTQPQ 168
           W + RR  P+
Sbjct: 179 WCSRRRRWPE 188



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>Os03g0705700:Os03g0705700 |
          Length = 89

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 20/40 (50%), Positives = 21/40 (52%)
 Frame = -2

Query: 317 PRRCRGHGMQPCSRRRSSCVRQAAPPSPTRPGRKERLLPP 198
           PRR RG    P  RRRS+  R  A P P  PGR   L PP
Sbjct: 13  PRRRRGR--PPPPRRRSAPDRPRAAPPP--PGRAPPLSPP 48



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>Os03g0602600:Os03g0602600 |
          Length = 572

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +2

Query: 284 RAASRAHGSGEVLADHETEEPILPPPSQVDAGNVDECKDIGVDVVPAEPRSTK-EGKDEE 460
           +AA+ A  S E     E ++        V+  + +E +D+G D+VP+  R  K    D E
Sbjct: 124 KAATTASSSEEKDKAKEPKKRGRRKVKTVEELSDNEGEDLGEDLVPSNDRQEKISANDLE 183

Query: 461 PTVTELLVSDGDGQD 505
             +  LL+ D D  D
Sbjct: 184 SKIAALLLEDTDDND 198



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>AY341859:Os03g0758000 |
          Length = 314

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = +2

Query: 398 DIGVDVVPAEPRSTKEGKDEEPTVTELLVSDGDGQDKFQACDDAKEVDDDGKQMAAAEAV 577
           D+ VDVV A  R  +E ++E P         GDG     +   + E     K+ AAAEA 
Sbjct: 47  DLPVDVVGAAAREEEEEEEEAPA------RSGDGAAAAASSSSSGEPAAPDKRPAAAEAA 100

Query: 578 ESA 586
            +A
Sbjct: 101 PAA 103



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>AK068978:Os07g0240200 |
          Length = 501

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 28/129 (21%), Positives = 45/129 (34%), Gaps = 22/129 (17%)
 Frame = +2

Query: 215 PSVQDVWDWEVLPDEHRSFYAESRAASRAHGSGEVLADHETE--------EPILPPPSQV 370
           P +  ++D  ++ D  +S  +    A   + SG  +   ++E        E   P PS V
Sbjct: 335 PDLTPMYDVGLMKDTGKSSASAPAPAKGGNASGAAVTKRDSESEAAAPADEASAPAPSSV 394

Query: 371 --------------DAGNVDECKDIGVDVVPAEPRSTKEGKDEEPTVTELLVSDGDGQDK 508
                         D G+       G       P   +E + ++   T     DGD  + 
Sbjct: 395 GKKVSTKATAPAPSDDGSASPEPSEGESADEKNPEEEEEEEGDDAAATTTPGGDGDSPET 454

Query: 509 FQACDDAKE 535
             A DDAKE
Sbjct: 455 EAAGDDAKE 463



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>AK060370:Os03g0125900 |
          Length = 183

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 222 SRTCGTGRCCLTNTGASTPRAGLHPVPTAAARFLPITKPRNRSCLPRHK 368
           +R CG GRCC    GAS         P +  R    ++ RN + LP+ K
Sbjct: 133 ARPCGAGRCCGIGGGASRAGEITATSPPSGPR---SSRRRNTTLLPQRK 178



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>Os02g0604000:Os02g0604000 |
          Length = 406

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +1

Query: 868 AEPG-HVIYDGGRRVHKGQHIVRWLL-RRLLIHPPAIQLSDQAQA 996
           A+PG +V +DG     +   ++  LL RR L+HPP I  ++ A+A
Sbjct: 362 ADPGRYVSWDGVHLTQRAYGVMAELLFRRGLVHPPPINFTNSARA 406



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>AK109286:Os02g0251900 |
          Length = 126

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -2

Query: 365 VTGEAGSVPRFRDRQEPRRCRGHGMQPCSRRRSSCVRQAAPPSPTRPGRKERLL 204
           +TG   +VP     Q PR CR  G +      ++ V++ A P P  P   E ++
Sbjct: 39  LTGNDAAVPA-APPQRPRPCRADGWRGAGGASATVVKREAVPPPVAPWVDEMMM 91



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>AK102985:Os03g0271800 |
          Length = 142

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
 Frame = -2

Query: 326 RQEPRRCRGHGMQ---PCSRRRSSCVRQAAPPSPTRPGRKERLLPPWQTNRRTQP 171
           R  P R  G G +   P  R   SC      P P  P R  RL P    + RT+P
Sbjct: 37  RTPPTRSAGGGARSRTPTCRPCPSCRTSGTTPPPRPPRRAARLAPCTGASPRTRP 91



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>AK101620:Os12g0152900 |
          Length = 509

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 838 NSAGGAADIEAEPGHVIYDGGRR---VHKGQH 924
           N++ GAA  +AE G  + DGGRR   +H G H
Sbjct: 260 NTSAGAAMFDAEYGRWLEDGGRRMAELHGGLH 291


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 34,046,115
Number of extensions: 817978
Number of successful extensions: 3586
Number of sequences better than 10.0: 22
Number of HSP's gapped: 3551
Number of HSP's successfully gapped: 22
Length of query: 411
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 308
Effective length of database: 11,275,632
Effective search space: 3472894656
Effective search space used: 3472894656
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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