ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf44l24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P40035:PIC2_YEAST Mitochondrial phosphate carrier protein 2 - Sa... 53 4e-07
2O61703:MPCP_CHOFU Phosphate carrier protein, mitochondrial precu... 45 1e-04
3P40614:MPCP_CAEEL Phosphate carrier protein, mitochondrial precu... 43 4e-04
4P23641:MPCP_YEAST Mitochondrial phosphate carrier protein - Sacc... 42 0.001
5P16036:MPCP_RAT Phosphate carrier protein, mitochondrial precurs... 42 0.001
6Q5R7W2:MPCP_PONPY Phosphate carrier protein, mitochondrial precu... 42 0.001
7Q8VEM8:MPCP_MOUSE Phosphate carrier protein, mitochondrial precu... 42 0.001
8Q00325:MPCP_HUMAN Phosphate carrier protein, mitochondrial precu... 42 0.001
9P12234:MPCP_BOVIN Phosphate carrier protein, mitochondrial precu... 42 0.001
10O30387:LEP4_MYXXD Type 4 prepilin-like proteins leader peptide-p... 32 0.95
11Q00546:TENR_CHICK Tenascin-R precursor - Gallus gallus (Chicken) 31 1.6
12Q6CTM7:PALF_KLULA pH-response regulator protein palF/RIM8 - Kluy... 30 2.8
13Q01479:M1_DHVI1 Matrix protein 1 - Dhori virus (strain Indian/13... 30 2.8
14Q613L4:HDA4_CAEBR Histone deacetylase 4 - Caenorhabditis briggsae 30 3.6
15P47580:Y338_MYCGE Uncharacterized lipoprotein MG338 precursor - ... 29 8.0

>P40035:PIC2_YEAST Mitochondrial phosphate carrier protein 2 - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 300
 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = +3

Query: 21  GLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTG 119
           GL +RIVMIGTLT  QW IYD+FK  VGLPTTG
Sbjct: 268 GLMVRIVMIGTLTSFQWLIYDSFKAYVGLPTTG 300



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>O61703:MPCP_CHOFU Phosphate carrier protein, mitochondrial precursor - Choristoneura|
           fumiferana (Spruce budworm)
          Length = 349

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 24/45 (53%), Positives = 29/45 (64%)
 Frame = +3

Query: 18  RGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 152
           +GL  RI+MIGTLT  QW IYDA KV + +P     PP A + ES
Sbjct: 298 KGLGPRIIMIGTLTALQWFIYDAVKVWLRMP----RPPPAEMPES 338



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>P40614:MPCP_CAEEL Phosphate carrier protein, mitochondrial precursor - Caenorhabditis|
           elegans
          Length = 340

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +3

Query: 18  RGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEESA 155
           +GL  RI+MIGTLT  QW IYD+ KV + LP     PP  P    A
Sbjct: 291 KGLVPRIIMIGTLTALQWFIYDSVKVALNLPRP--PPPEMPASLKA 334



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>P23641:MPCP_YEAST Mitochondrial phosphate carrier protein - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 311

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = +3

Query: 21  GLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTT 116
           GLP R+VM+GTLT  Q+GIY + K  +G P T
Sbjct: 272 GLPTRLVMVGTLTSLQFGIYGSLKSTLGCPPT 303



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>P16036:MPCP_RAT Phosphate carrier protein, mitochondrial precursor - Rattus|
           norvegicus (Rat)
          Length = 356

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/45 (51%), Positives = 27/45 (60%)
 Frame = +3

Query: 18  RGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 152
           +GL  RI+MIGTLT  QW IYD+ KV   LP     PP   + ES
Sbjct: 307 KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 347



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>Q5R7W2:MPCP_PONPY Phosphate carrier protein, mitochondrial precursor - Pongo pygmaeus|
           (Orangutan)
          Length = 361

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/45 (51%), Positives = 27/45 (60%)
 Frame = +3

Query: 18  RGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 152
           +GL  RI+MIGTLT  QW IYD+ KV   LP     PP   + ES
Sbjct: 312 KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 352



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>Q8VEM8:MPCP_MOUSE Phosphate carrier protein, mitochondrial precursor - Mus musculus|
           (Mouse)
          Length = 357

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/45 (51%), Positives = 27/45 (60%)
 Frame = +3

Query: 18  RGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 152
           +GL  RI+MIGTLT  QW IYD+ KV   LP     PP   + ES
Sbjct: 308 KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 348



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>Q00325:MPCP_HUMAN Phosphate carrier protein, mitochondrial precursor - Homo sapiens|
           (Human)
          Length = 362

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/45 (51%), Positives = 27/45 (60%)
 Frame = +3

Query: 18  RGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 152
           +GL  RI+MIGTLT  QW IYD+ KV   LP     PP   + ES
Sbjct: 313 KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 353



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>P12234:MPCP_BOVIN Phosphate carrier protein, mitochondrial precursor - Bos taurus|
           (Bovine)
          Length = 362

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/45 (51%), Positives = 27/45 (60%)
 Frame = +3

Query: 18  RGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 152
           +GL  RI+MIGTLT  QW IYD+ KV   LP     PP   + ES
Sbjct: 313 KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 353



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>O30387:LEP4_MYXXD Type 4 prepilin-like proteins leader peptide-processing enzyme|
           [Includes: Leader peptidase - Myxococcus xanthus (strain
           DK 1622)
          Length = 335

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 159 LIFAAMTMYSWLWLLVDGTVSVTCLAPKIFCYCSRWLLSLS 281
           L FA +  + W + LV   V V+ L P  F     W+L LS
Sbjct: 95  LFFACLRRFGWTYELVPALVLVSLLVPLAFIDLDHWILPLS 135



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>Q00546:TENR_CHICK Tenascin-R precursor - Gallus gallus (Chicken)|
          Length = 1353

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = +2

Query: 62  CSVGNL*CV*SYGGTP-DHRRCSTSCSGRGISLIDFCCYDDVFLVVVIGGWDC 217
           C  G   C   Y G      RC  +CSGRG+     C  +D +     GG DC
Sbjct: 275 CDNGTCVCAEGYAGEDCGWLRCPNACSGRGVCQDGLCICEDGY-----GGQDC 322



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>Q6CTM7:PALF_KLULA pH-response regulator protein palF/RIM8 - Kluyveromyces lactis|
           (Yeast) (Candida sphaerica)
          Length = 572

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 330 GGQKKAYFACLMSSSHLIETITICYNNKRFWVLNK*LIQSHPPI 199
           GG+ K  F+C ++  +L+ +I     + R+WV  +   Q  PPI
Sbjct: 133 GGEHKFPFSCKINGKNLVSSIDFKKGSIRYWVQAELHAQKTPPI 176



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>Q01479:M1_DHVI1 Matrix protein 1 - Dhori virus (strain Indian/1313/61) (Dho)|
          Length = 270

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = -2

Query: 388 LRSNSLAVLKLIMSSIKLSRGAKKGLFRLLNEFLSSDRDNNHLLQ*QKILGAKQVTDTV 212
           L SN L   K  M+S+K    AK GL  + N   S DR+   +L    IL  + +  TV
Sbjct: 73  LISNRLKGGKYDMNSVKKGYKAKDGLQEISNYISSLDREGKQVLACMLILSTQSIGKTV 131



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>Q613L4:HDA4_CAEBR Histone deacetylase 4 - Caenorhabditis briggsae|
          Length = 892

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
 Frame = -2

Query: 202 NNHNQEYIVIAAKINQADSSTGATGGAP---PVVGSPTITLNAS 80
           ++ +  + V+ A++ +A SSTG+TGGA    PV+ S +  L A+
Sbjct: 5   SSSSSSFPVVFARMEEASSSTGSTGGAMAGIPVIPSTSAALLAN 48



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>P47580:Y338_MYCGE Uncharacterized lipoprotein MG338 precursor - Mycoplasma genitalium|
          Length = 1271

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = -2

Query: 397  WQNLRSNSLAVLKLIMSSIKLSRGAKKGLFRLLNEFLSSDRDNNHLLQ*QKIL-GAKQVT 221
            W+N ++NSL + K I  S+ + +   +G   L    L  +    H  + Q+IL G K++ 
Sbjct: 1198 WKNNKANSLGLKKEIFMSLLIEQALDEGTQELAFLDLIRENQKQHQREHQQILVGDKRLY 1257

Query: 220  DTVPST 203
            D +  T
Sbjct: 1258 DILGQT 1263


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 93,689,317
Number of extensions: 2316286
Number of successful extensions: 4581
Number of sequences better than 10.0: 15
Number of HSP's gapped: 4579
Number of HSP's successfully gapped: 15
Length of query: 152
Length of database: 100,686,439
Length adjustment: 103
Effective length of query: 49
Effective length of database: 72,434,054
Effective search space: 3549268646
Effective search space used: 3549268646
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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