ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf44l05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK104342:Os02g0732900 | 670 | 0.0 | 2 | AK065796:Os02g0732900 | 670 | 0.0 | 3 | Os07g0600300:Os07g0600300 | 281 | 9e-76 | 4 | Os04g0615500:Os04g0615500 | 251 | 8e-67 | 5 | AK064525:Os04g0628000 | 210 | 2e-54 | 6 | AK107307:Os03g0167000 | 34 | 0.34 | 7 | AK070632:Os01g0891000 | 32 | 1.3 |
|---|
>AK104342:Os02g0732900 | Length = 449 Score = 670 bits (1729), Expect = 0.0 Identities = 324/420 (77%), Positives = 361/420 (85%), Gaps = 6/420 (1%) Frame = +3 Query: 141 LRCFVGLRWSAPRVQVRRQLDAVAGV-----GSGARFRAPASSGSQPCYSSIIIRNDNSQ 305 LRCFVGLRWSAPR+QVR DAVAG+ G G RFRAPASS SQPC +III N++ Q Sbjct: 30 LRCFVGLRWSAPRIQVREYPDAVAGIAKGAGGRGGRFRAPASSISQPCSRTIIITNEHVQ 89 Query: 306 NADFPRNYSKREKKPFPIPVLELRRRARQRMKEAEGXXXXXXXXXXNGMLVQRLIPEAYR 485 NADFP NYSKREKKPFPIPVLELRRRA++R K+AEG NGML++RLIP AY+ Sbjct: 90 NADFPPNYSKREKKPFPIPVLELRRRAKERAKKAEGKPKRSLPPPKNGMLIKRLIPVAYK 149 Query: 486 VYNARILLINNLKRLMKVVPVKGCKYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDWGSTF 665 VYNARILLINNLKRLMKV+PVKGCK+CSEIHVGSVGHPFRTC+GMSSDKR+G+HDWG T Sbjct: 150 VYNARILLINNLKRLMKVIPVKGCKHCSEIHVGSVGHPFRTCKGMSSDKRRGQHDWGGTL 209 Query: 666 VEAVFLPVEAYHLEDRLGPRIPHDQRFEVPRIPALVELCIQAGLDLPEYPTKRRRKPIVK 845 VEAVF+PVEAYHLEDRLG RIPHDQRF VPRIPALVELCIQAG++LPEYPTKRRRKPI+K Sbjct: 210 VEAVFVPVEAYHLEDRLGKRIPHDQRFAVPRIPALVELCIQAGVNLPEYPTKRRRKPIIK 269 Query: 846 IGRKEFVDANEDDLPDPEPDKFKEPILEEVPDDEIIXXXXXXXXXXXXXXXXVVWETLRN 1025 IG+ EFVDANEDDLPDPEP K + PILEE+ D+EII WE +R+ Sbjct: 270 IGKNEFVDANEDDLPDPEPYKLEHPILEELNDNEIIAPASPEEIVALAEETLEAWEVVRD 329 Query: 1026 GALRLMKRYSVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYV 1205 GAL+LMK Y+VRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYV Sbjct: 330 GALKLMKGYAVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYV 389 Query: 1206 WHMPESGE-LQKELKSFYGQAPAVVELCIQGGAQVPEKYKATMRLDIGIPSSLKEAEMVV 1382 WH+PESGE LQ++LKSFYGQAPA+VE+C+Q GA+VPEKYKATMRLDIGIP+SL+EAEMVV Sbjct: 390 WHLPESGEDLQRDLKSFYGQAPAIVEICVQAGAKVPEKYKATMRLDIGIPTSLREAEMVV 449
>AK065796:Os02g0732900 | Length = 449 Score = 670 bits (1729), Expect = 0.0 Identities = 324/420 (77%), Positives = 361/420 (85%), Gaps = 6/420 (1%) Frame = +3 Query: 141 LRCFVGLRWSAPRVQVRRQLDAVAGV-----GSGARFRAPASSGSQPCYSSIIIRNDNSQ 305 LRCFVGLRWSAPR+QVR DAVAG+ G G RFRAPASS SQPC +III N++ Q Sbjct: 30 LRCFVGLRWSAPRIQVREYPDAVAGIAKGAGGRGGRFRAPASSISQPCSRTIIITNEHVQ 89 Query: 306 NADFPRNYSKREKKPFPIPVLELRRRARQRMKEAEGXXXXXXXXXXNGMLVQRLIPEAYR 485 NADFP NYSKREKKPFPIPVLELRRRA++R K+AEG NGML++RLIP AY+ Sbjct: 90 NADFPPNYSKREKKPFPIPVLELRRRAKERAKKAEGKPKRSLPPPKNGMLIKRLIPVAYK 149 Query: 486 VYNARILLINNLKRLMKVVPVKGCKYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDWGSTF 665 VYNARILLINNLKRLMKV+PVKGCK+CSEIHVGSVGHPFRTC+GMSSDKR+G+HDWG T Sbjct: 150 VYNARILLINNLKRLMKVIPVKGCKHCSEIHVGSVGHPFRTCKGMSSDKRRGQHDWGGTL 209 Query: 666 VEAVFLPVEAYHLEDRLGPRIPHDQRFEVPRIPALVELCIQAGLDLPEYPTKRRRKPIVK 845 VEAVF+PVEAYHLEDRLG RIPHDQRF VPRIPALVELCIQAG++LPEYPTKRRRKPI+K Sbjct: 210 VEAVFVPVEAYHLEDRLGKRIPHDQRFAVPRIPALVELCIQAGVNLPEYPTKRRRKPIIK 269 Query: 846 IGRKEFVDANEDDLPDPEPDKFKEPILEEVPDDEIIXXXXXXXXXXXXXXXXVVWETLRN 1025 IG+ EFVDANEDDLPDPEP K + PILEE+ D+EII WE +R+ Sbjct: 270 IGKNEFVDANEDDLPDPEPYKLEHPILEELNDNEIIAPASPEEIVALAEETLEAWEVVRD 329 Query: 1026 GALRLMKRYSVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYV 1205 GAL+LMK Y+VRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYV Sbjct: 330 GALKLMKGYAVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYV 389 Query: 1206 WHMPESGE-LQKELKSFYGQAPAVVELCIQGGAQVPEKYKATMRLDIGIPSSLKEAEMVV 1382 WH+PESGE LQ++LKSFYGQAPA+VE+C+Q GA+VPEKYKATMRLDIGIP+SL+EAEMVV Sbjct: 390 WHLPESGEDLQRDLKSFYGQAPAIVEICVQAGAKVPEKYKATMRLDIGIPTSLREAEMVV 449
>Os07g0600300:Os07g0600300 | Length = 418 Score = 281 bits (719), Expect = 9e-76 Identities = 167/409 (40%), Positives = 222/409 (54%), Gaps = 13/409 (3%) Frame = +3 Query: 192 RQLDAVAGVGSGARFRAPASSGSQPCYSSIIIRNDNSQNADFPRNYSKREKKPFPIPVLE 371 R L V G GS R GS+ + AD PR K E+KP+ P+ Sbjct: 21 RSLPLVGG-GSWTRLVHGGGGGSEA-------EGEEFPYADVPRPGRKWERKPYVTPMKV 72 Query: 372 LRRRARQ-RMKEAEGXXXXXXXXXXNGMLVQRLIPEAYRVYNARILLINNLKRLMK--VV 542 L RRA++ R E NG+LV L+ A++V+ A L+ L RL++ V Sbjct: 73 LIRRAKEERRARRENPCRVLERPPENGLLVPGLVGVAHQVHGAWESLLRGLTRLVEGGAV 132 Query: 543 PVKGCKYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDWG-STFVEAVFLPVEAYHLEDRLG 719 V+ C++C E+HVG VGH RTC G S R H W T + V P YHL DR+G Sbjct: 133 AVRRCRFCPEVHVGGVGHEIRTCEGPGSAARNALHVWRPGTARDVVGFPY-CYHLFDRVG 191 Query: 720 -PRIPHDQRFEVPRIPALVELCIQAGLDLPEYPTKRRRKPIVKIGRKEFVDANEDDLPDP 896 PR+ H ++++VPR+PA++ELCIQAG+D+ YP KRR +P+ I + VD DD D Sbjct: 192 KPRVSHKEKYDVPRLPAILELCIQAGVDVERYPAKRRTRPVYSIEGR-IVDFEPDDDEDD 250 Query: 897 EPDKFKEPILEEVPDDEIIXXXXXXXXXXXXXXXXVVWETLRNGALRLMKRYSVRVCGYC 1076 D P L + DE W +R GA RLM +Y V CGYC Sbjct: 251 SADD-TGPSLPSLAADEAGKMEEEMTVCELGARTLQSWLDMRAGAARLMGKYGVVTCGYC 309 Query: 1077 PEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYVWHMPESGE--------L 1232 PEV +G GHK R C A KHQQR+GQH WQ A +DDL+ P YVWH+P +G L Sbjct: 310 PEVQVGPKGHKVRMCKASKHQQRDGQHAWQEATVDDLVRPNYVWHVPATGHGGDGGAPPL 369 Query: 1233 QKELKSFYGQAPAVVELCIQGGAQVPEKYKATMRLDIGIPSSLKEAEMV 1379 ELK +YG+APAVVELC++ GA VP +Y++ MRLD+ +P + E ++V Sbjct: 370 ANELKRYYGKAPAVVELCVRAGAPVPAQYRSMMRLDV-VPPARDEHDLV 417
>Os04g0615500:Os04g0615500 | Length = 390 Score = 251 bits (642), Expect = 8e-67 Identities = 124/306 (40%), Positives = 176/306 (57%), Gaps = 2/306 (0%) Frame = +3 Query: 303 QNADFPRNYSKREKKPFPIPVLELRRRARQRMKEAEGXXXXXXXXXXNGMLVQRLIPEAY 482 QN D P K++KKPFP+P+ ++ + +RQ + A NG+LV LIP AY Sbjct: 62 QNVDLPELLPKKKKKPFPVPIKKMLQASRQDKRLARMRIEKPLEPPKNGLLVPELIPVAY 121 Query: 483 RVYNARILLINNLKRLMKVVPVKGCKYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDWGST 662 V + +LI L +L+ V V GC+ C ++HVG VGH + C G S +R H W Sbjct: 122 EVLDNWKVLIRGLSQLLNVGTVYGCRKCPQVHVGPVGHQIQDCYGTGSQRRNSHHSWVRG 181 Query: 663 FVEAVFLPVEAYHLEDRLGPRIPHDQRFEVPRIPALVELCIQAGLDLPEYPTKRRRKPIV 842 V V +P+E+YH D G R+ H+ RF+ RIPA+VELCIQAG++LP+YP++RR P+ Sbjct: 182 SVNDVLIPIESYHQFDPFGWRVKHETRFDYDRIPAIVELCIQAGVELPQYPSRRRTAPVR 241 Query: 843 KIGRKEFVDANEDDLPDPEPDKFKEPILEEVP--DDEIIXXXXXXXXXXXXXXXXVVWET 1016 IG+K D P P + +L E+ ++ + Sbjct: 242 MIGKKVIDRGGFVDGPKPHRSEDCISLLAELDTFSNQQGQSSTPSNVEELAEKTLKAYLN 301 Query: 1017 LRNGALRLMKRYSVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPP 1196 ++ G RLM++Y+V+ CGYC EVH+G GH + CGAFKHQ R+G+HGWQ AV+DD+IPP Sbjct: 302 VQRGVARLMRKYTVKTCGYCSEVHVGPWGHNVKLCGAFKHQWRDGKHGWQDAVVDDVIPP 361 Query: 1197 RYVWHM 1214 YVWH+ Sbjct: 362 NYVWHV 367 Score = 79.0 bits (193), Expect = 9e-15 Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 4/177 (2%) Frame = +3 Query: 795 LDLPEYPTKRRRKPIVKIGRKEFVDANEDD--LPDPEPDKFKEPILEEVPDDEIIXXXXX 968 +DLPE K+++KP + K+ + A+ D L +K EP + E+I Sbjct: 64 VDLPELLPKKKKKPF-PVPIKKMLQASRQDKRLARMRIEKPLEPPKNGLLVPELIPVAYE 122 Query: 969 XXXXXXXXXXXVVWETLRNGALRLMKRYSVRVCGYCPEVHIGASGHKARNCGAFKHQQRN 1148 W+ L G +L+ +V C CP+VH+G GH+ ++C Q+RN Sbjct: 123 VLDN---------WKVLIRGLSQLLNVGTVYGCRKCPQVHVGPVGHQIQDCYGTGSQRRN 173 Query: 1149 GQHGWQAAVLDDLIPPRYVWHM--PESGELQKELKSFYGQAPAVVELCIQGGAQVPE 1313 H W ++D++ P +H P ++ E + Y + PA+VELCIQ G ++P+ Sbjct: 174 SHHSWVRGSVNDVLIPIESYHQFDPFGWRVKHETRFDYDRIPAIVELCIQAGVELPQ 230 Score = 54.7 bits (130), Expect = 2e-07 Identities = 26/77 (33%), Positives = 38/77 (49%) Frame = +3 Query: 477 AYRVYNARILLINNLKRLMKVVPVKGCKYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDWG 656 A + A + + + RLM+ VK C YCSE+HVG GH + C R G+H W Sbjct: 292 AEKTLKAYLNVQRGVARLMRKYTVKTCGYCSEVHVGPWGHNVKLCGAFKHQWRDGKHGWQ 351 Query: 657 STFVEAVFLPVEAYHLE 707 V+ V P +H++ Sbjct: 352 DAVVDDVIPPNYVWHVK 368
>AK064525:Os04g0628000 | Length = 327 Score = 210 bits (535), Expect = 2e-54 Identities = 109/295 (36%), Positives = 158/295 (53%), Gaps = 2/295 (0%) Frame = +3 Query: 456 VQRLIPEAYRVYNARILLINNLKRLMKVVPVKGCKYCSEIHVGSVGHPFRTCRGMSSDKR 635 ++R+IP A V AR ++ + L++VVP+ CK+C E+H+G+VGH ++C G + Sbjct: 52 IKRMIPVAEEVVKAREIVTKGVSTLLQVVPIHSCKFCPEVHIGAVGHEMQSCHGFKRMIK 111 Query: 636 KGEHDWGSTFVEAVFLPVEAYHLEDRLGPRIPHDQRFEVPRIPALVELCIQAGLDLPEYP 815 H WG + + +PVE++HLE+ I HDQRF+ PR+PA++ELC QAG D+P+ Sbjct: 112 NQPHKWGPGCLNDILIPVESFHLENTFQDEIKHDQRFDFPRVPAVLELCHQAGADIPDEV 171 Query: 816 TKRRRKPIVKIGRKEFVDANEDDLPDPEPDKFKEPILEEVPDDEIIXXXXXXXXXXXXXX 995 R G + D+ +P F L + I Sbjct: 172 WHRS-------GTSSAIVRENDE----KPAAFLPEELRFIGQRTI--------------- 205 Query: 996 XXVVWETLRNGALRLMKRYSVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAV 1175 WE LR G +L+ Y +VC C EVH+G SGHKAR CG FK + G+H W+ A Sbjct: 206 --EAWERLRLGVTKLLLVYPSKVCERCSEVHVGLSGHKARMCGVFKFEGWRGKHKWKKAD 263 Query: 1176 LDDLIPPRYVWHM--PESGELQKELKSFYGQAPAVVELCIQGGAQVPEKYKATMR 1334 +DDL+PP+ VWH + L + +YG APAV+ELC+Q GA+ P KY M+ Sbjct: 264 VDDLVPPKIVWHQRPHDPPVLVDAGRDYYGHAPAVIELCMQVGARAPPKYHCMMK 318
>AK107307:Os03g0167000 | Length = 254 Score = 33.9 bits (76), Expect = 0.34 Identities = 22/62 (35%), Positives = 30/62 (48%) Frame = +3 Query: 213 GVGSGARFRAPASSGSQPCYSSIIIRNDNSQNADFPRNYSKREKKPFPIPVLELRRRARQ 392 G G+G APA + +P + +R Q PR+ +R P P P L LRR RQ Sbjct: 61 GAGAGLLRGAPAGAREEP---QVPVRPRQGQGRPKPRHQDQRH--PRPRPPLRLRRHPRQ 115 Query: 393 RM 398 R+ Sbjct: 116 RL 117
>AK070632:Os01g0891000 | Length = 526 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%) Frame = -2 Query: 596 VSNRSNVYLTAIFAAFHWYYFHQPLQVVD--EQNSCVV-HSVCLWY*SLD 456 VSN+ YL + A + +Y ++PL+ +D EQ S V+ VC+W +D Sbjct: 406 VSNQDKWYLDHLDATWEGFYTNEPLKGIDDPEQQSLVIGGEVCMWGEQID 455 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 43,456,856 Number of extensions: 979588 Number of successful extensions: 2870 Number of sequences better than 10.0: 7 Number of HSP's gapped: 2838 Number of HSP's successfully gapped: 12 Length of query: 537 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 432 Effective length of database: 11,195,550 Effective search space: 4836477600 Effective search space used: 4836477600 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
