>LOC_Os02g50010:12002.t04585:unspliced-genomic APO2, putative, expressed|
Length = 3409
Score = 288 bits (623), Expect(7) = 0.0
Identities = 111/133 (83%), Positives = 124/133 (93%)
Frame = +3 / +1
Query: 555 CKYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDWGSTFVEAVFLPVEAYHLEDRLGPRIPH 734
C++CSEIHVGSVGHPFRTC+GMSSDKR+G+HDWG T VEAVF+PVEAYHLEDRLG RIPH
Sbjct: 2263 CRHCSEIHVGSVGHPFRTCKGMSSDKRRGQHDWGGTLVEAVFVPVEAYHLEDRLGKRIPH 2442
Query: 735 DQRFEVPRIPALVELCIQAGLDLPEYPTKRRRKPIVKIGRKEFVDANEDDLPDPEPDKFK 914
DQRF VPRIPALVELCIQAG++LPEYPTKRRRKPI+KIG+ EFVDANEDDLPDPEP K +
Sbjct: 2443 DQRFAVPRIPALVELCIQAGVNLPEYPTKRRRKPIIKIGKNEFVDANEDDLPDPEPYKLE 2622
Query: 915 EPILEEVPDDEII 953
PILEE+ D+EII
Sbjct: 2623 HPILEELNDNEII 2661
Score = 191 bits (412), Expect(7) = 0.0
Identities = 81/109 (74%), Positives = 91/109 (83%)
Frame = +3 / +2
Query: 234 FRAPASSGSQPCYSSIIIRNDNSQNADFPRNYSKREKKPFPIPVLELRRRARQRMKEAEG 413
FRAPASS SQPC +III N++ QNADFP NYSKREKKPFPIPVLELRRRA++R K+AEG
Sbjct: 1112 FRAPASSISQPCSRTIIITNEHVQNADFPPNYSKREKKPFPIPVLELRRRAKERAKKAEG 1291
Query: 414 XXXXXXXXXXNGMLVQRLIPEAYRVYNARILLINNLKRLMKVVPVKGCK 560
NGML++RLIP AY+VYNARILLINNLKRLMKV+PVKGCK
Sbjct: 1292 KPKRSLPPPKNGMLIKRLIPVAYKVYNARILLINNLKRLMKVIPVKGCK 1438
Score = 182 bits (393), Expect(7) = 0.0
Identities = 67/74 (90%), Positives = 72/74 (97%)
Frame = +3 / +1
Query: 1008 WETLRNGALRLMKRYSVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDL 1187
WE +R+GAL+LMK Y+VRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDL
Sbjct: 2716 WEVVRDGALKLMKGYAVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDL 2895
Query: 1188 IPPRYVWHMPESGE 1229
IPPRYVWH+PESGE
Sbjct: 2896 IPPRYVWHLPESGE 2937
Score = 110 bits (235), Expect(7) = 0.0
Identities = 44/55 (80%), Positives = 53/55 (96%)
Frame = +3 / +1
Query: 1227 ELQKELKSFYGQAPAVVELCIQGGAQVPEKYKATMRLDIGIPSSLKEAEMVV*MK 1391
+LQ++LKSFYGQAPA+VE+C+Q GA+VPEKYKATMRLDIGIP+SL+EAEMVV* K
Sbjct: 2938 DLQRDLKSFYGQAPAIVEICVQAGAKVPEKYKATMRLDIGIPTSLREAEMVV*TK 3102
Score = 42.3 bits (86), Expect(7) = 0.0
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3 / +3
Query: 141 LRCFVGLRWSAPRVQV 188
LRCFVGLRWSAPR+QV
Sbjct: 195 LRCFVGLRWSAPRIQV 242
Score = 26.3 bits (51), Expect(7) = 0.0
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 180 VQVRRQLDAVAGVGSGA 230
VQVR DAVAG+ GA
Sbjct: 380 VQVREYPDAVAGIAKGA 430
Score = 24.0 bits (46), Expect(7) = 0.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 1521 VLFVSDANQHLPDVSLF 1571
VLFV A HLP+ SL+
Sbjct: 3215 VLFVPYARYHLPNSSLY 3265
Score = 295 bits (639), Expect(5) = e-155
Identities = 137/225 (60%), Positives = 167/225 (74%)
Frame = -2 / -2
Query: 1229 LPRFRHVPDVSRGY*VIKHRCLPSMLSIPLLVLEGSTVARFMTTRSNVHLRTVSANPH*I 1050
LP F VP +SR Y*VI+H CLPSML IPLLV EG+T+ F+ T S ++L VS NPH +
Sbjct: 2937 LPGFWQVPHISRRY*VIEHCCLPSMLPIPLLVFEGTTIPCFVATCSYMNLWAVSTNPHRV 2758
Query: 1049 PLHKP*CTVPERLPHHECFLSKSSCLLWAQRRDNLIVRYFFKNWLLKFVRLRVRQVIFIC 870
LHK T+P+ LP ECFLS S+ LLWA +NL++ FFKNW+LKFVRL V VI IC
Sbjct: 2757 ALHKLQGTIPDYLPCFECFLS*SNNLLWACWGNNLVII*FFKNWMLKFVRLWVW*VILIC 2578
Query: 869 VDKLFPSDLNNWLSSALCGVLREVETSLDA*LHKSRNAGHLKPLVMRDARA*TVL*VVSF 690
++KL SD NN LSS LCGV R++ +SL+A*LHKSR+A + KPL+MRD * +L*+V F
Sbjct: 2577 INKLVLSDFNNGLSSPLCGVFRKINSSLNA*LHKSRDARYSKPLIMRDTLP*AIL*MVGF 2398
Query: 689 NWQENSFNKSTSPVMFSLTFIRRHSSARSERVSNRSNVYLTAIFA 555
N +NSFN+STSPVM TFI RHS A SERVSNRSN+YLTA+ A
Sbjct: 2397 NRHKNSFNQSTSPVMLPPTFI*RHSFACSERVSNRSNMYLTAMSA 2263
Score = 179 bits (386), Expect(5) = e-155
Identities = 70/110 (63%), Positives = 80/110 (72%)
Frame = -2 / -1
Query: 563 IFAAFHWYYFHQPLQVVDEQNSCVVHSVCLWY*SLD*HSIFWRWRWPLRLPFSFFHPLSC 384
+ A+FHW YFH+PLQVVD+QNSC++H VC WY S D H IFWRW PFSF PL C
Sbjct: 1441 LLASFHWNYFHKPLQVVDQQNSCIIHLVCNWYQSFDQHPIFWRW*RSFGFPFSFLCPLFC 1262
Query: 383 SAP*LQYWYRKWFLLPFGVVTWKISILRIVVSDDDGAITRLGPTGSRRSE 234
SA *LQYWY KWFLL F V+ WKISIL + + DDDG+ RLG T SR SE
Sbjct: 1261 SAS*LQYWYWKWFLLSFRVIRWKISILNMFICDDDGSRARLGDT*SRCSE 1112
Score = 95.5 bits (202), Expect(5) = e-155
Identities = 43/55 (78%), Positives = 44/55 (80%)
Frame = -3 / -3
Query: 1390 FIQTTISASFKLEGIPISSLIVALYFSGTCAPP*MHSSTTAGACP*KLLSSFCSS 1226
F+QTTISAS KL GIPISSLIVALYFSGT AP * H ST AGACP*KL S C S
Sbjct: 3101 FVQTTISASLKLVGIPISSLIVALYFSGTFAPA*THISTIAGACP*KLFRSLCKS 2937
Score = 50.1 bits (103), Expect(5) = e-155
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3 / -1
Query: 187 TWTRGADHRRPTKQRSWGRLDEQV 116
TW RGADHRRPTKQR GR +EQV
Sbjct: 241 TWMRGADHRRPTKQRRGGRREEQV 170
Score = 24.9 bits (48), Expect(5) = e-155
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2 / -1
Query: 248 SRRSESRTAANSCDRV*LPPDL 183
S + +RT N C+R+ + PDL
Sbjct: 448 STTASTRTLGNPCNRIRILPDL 383
Score = 130 bits (279), Expect(7) = e-115
Identities = 62/85 (72%), Positives = 65/85 (76%)
Frame = -3 / -2
Query: 562 YLQPFTGTTFISLFKLLMSKILALYTLYASGISLWTSIPXXXXXXXXXXFPSASFILCLA 383
YL PFTG TFISLFKLL+SKILALYTLYA+GISL SIP FPSA F L A
Sbjct: 1440 YLHPFTGITFISLFKLLISKILALYTLYATGISLLISIPFFGGGKDRLGFPSAFFALSFA 1261
Query: 382 RRLNSSTGIGNGFFSLLE*LRGKSA 308
RRLNS+TGIGNGFFSL E*L GKSA
Sbjct: 1260 RRLNSNTGIGNGFFSLFE*LGGKSA 1186
Score = 114 bits (244), Expect(7) = e-115
Identities = 47/69 (68%), Positives = 49/69 (71%)
Frame = -3 / -3
Query: 1231 SSPDSGMCQTYLGGIRSSSTAACHPCCPFLCWCLKXXXXXXXXXXXPMCTSGQYPQTLTE 1052
SSPDSG C TYLGGI+SSSTAACHPCCPFLCWCLK P+ TSGQYPQT T
Sbjct: 2939 SSPDSGRCHTYLGGIKSSSTAACHPCCPFLCWCLKAPQFRALWPLAPI*TSGQYPQTRTA 2760
Query: 1051 YLFISLNAP 1025
FIS AP
Sbjct: 2759 *PFISFKAP 2733
Score = 103 bits (220), Expect(7) = e-115
Identities = 43/49 (87%), Positives = 43/49 (87%)
Frame = -3 / -3
Query: 700 W*ASTGKKTASTKVLPQSCSPLRLSEDIPRHVLKGCPTDPTCISLQYLQ 554
W*ASTG KTASTKV PQSC PLRLSEDIP HV KGCPTDPTCISLQ LQ
Sbjct: 2408 W*ASTGTKTASTKVPPQSCCPLRLSEDIPLHVRKGCPTDPTCISLQCLQ 2262
Score = 76.7 bits (161), Expect(7) = e-115
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = -2 / -2
Query: 1385 SDDHFSLFQTGGNPYI*PHCGFVLLRHLCAALNA*LNDSRRLPVEALELFLQL 1227
SDDHF L QT N YI* HCGFVLLRHLC +LN L++ R LP+E L + LQ+
Sbjct: 3096 SDDHFGLSQTCWNSYI*SHCGFVLLRHLCTSLNTYLHNRRCLPIETL*IPLQV 2938
Score = 75.8 bits (159), Expect(7) = e-115
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = -3 / -3
Query: 856 FLPILTIGFLRRFVGYSGRSRPAWMHSSTRAGMRGTSNL 740
F PIL +GFLRRFVGYSGR PA MH+STRAGMRGT+NL
Sbjct: 2564 FFPILIMGFLRRFVGYSGRLTPA*MHNSTRAGMRGTANL 2448
Score = 24.9 bits (48), Expect(7) = e-115
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / -2
Query: 268 QGWDPLEAGAL 236
QGW+ LEAGAL
Sbjct: 1146 QGWEILEAGAL 1114
Score = 24.4 bits (47), Expect(7) = e-115
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3 / -2
Query: 229 APLPTPATASSCLLTWTR 176
APL PATAS LT T+
Sbjct: 429 APLAIPATASGYSLTCTK 376
Score = 158 bits (339), Expect(4) = e-107
Identities = 72/109 (66%), Positives = 82/109 (75%)
Frame = +1 / +3
Query: 235 SERLLPVGPNLVIAPSSSETTILKMLIFHVTTPKGRRNHFLYQYWS*GAEQDRG*KKLKG 414
SE LL V PNL + PSSS+ + KMLIFH+ T K RRNHF YQYWS* AEQ RG +KLKG
Sbjct: 1113 SEHLLQVSPNLALEPSSSQMNMFKMLIFHLITRKERRNHFQYQYWS*DAEQKRGQRKLKG 1292
Query: 415 SLSGHRHLQKMEC*SRD*YQRHTECTTQEFCSSTT*RG**K*YQ*KAAN 561
+ + HLQKM C*S+D*YQ HT C QEFC STT*RG *K*+Q*K A+
Sbjct: 1293 NPNDLYHLQKMGC*SKD*YQLHTRCIMQEFC*STT*RGL*K*FQ*KDAS 1439
Score = 146 bits (313), Expect(4) = e-107
Identities = 76/125 (60%), Positives = 82/125 (65%)
Frame = +1 / +2
Query: 556 ANIAVRYTLDLLDTLSERAEECLLINVRENMTGEVXXXXXXXXXXXXTT*RTV*ARASLM 735
A+IAVRY LDLLDTLSE A+ECL INV NMTGEV T *R * SLM
Sbjct: 2264 ADIAVRYMLDLLDTLSEHAKECLQINVGGNMTGEVLWLKLFLCRLKPTI*RIA*GSVSLM 2443
Query: 736 TRGLRCPAFLLLWSYASKLVSTSLSTPQSAEESQLLRSEGKSLSTQMKMTCLTRSLTNLR 915
RGL A LLLWSYA KL L+TPQS EES LL+SE SL QM+MT T+SLTNL
Sbjct: 2444 IRGLLYLASLLLWSYAFKLELIFLNTPQSGEESPLLKSERTSLLMQMRMTYQTQSLTNLS 2623
Query: 916 SQFLK 930
QFLK
Sbjct: 2624 IQFLK 2638
Score = 92.3 bits (195), Expect(4) = e-107
Identities = 45/78 (57%), Positives = 51/78 (65%)
Frame = +1 / +2
Query: 994 KHSWCGRRSGTVH*GL*RGIQ*GFADTVLRCTLERVVIKRATVEPSSTSRGMDSMDGRQR 1173
KHS GR SG V * L*R + GF DT R E+V K V PS+TSRGM SMDG+Q+
Sbjct: 2702 KHSKHGR*SGMVP*SL*RATRCGFVDTAQRFI*EQVATKHGIVVPSNTSRGMGSMDGKQQ 2881
Query: 1174 CLMT*YPLDTSGTCRNLG 1227
C MT*Y LD GTC+N G
Sbjct: 2882 CSMT*YLLDMCGTCQNPG 2935
Score = 66.6 bits (139), Expect(4) = e-107
Identities = 35/74 (47%), Positives = 44/74 (59%)
Frame = +2 / +3
Query: 1226 GAAERAQELLRAGAGCR*AMHSGRRTSAGEVQSHNEARYRDSLQFERG*NGRLNETVVFM 1405
G AE ++E L AG M SG AGEVQSHNE RYR+S +FERG NGRLN+ V +
Sbjct: 2937 GLAEGSKEFLWAGTCDCGDMCSGWCKGAGEVQSHNETRYRNSNKFERGRNGRLNKDVSIV 3116
Query: 1406 LSMIEVKKTASSIL 1447
S + ++L
Sbjct: 3117 TSSSSLSDQRFTVL 3158
Score = 116 bits (248), Expect(6) = 9e-86
Identities = 59/112 (52%), Positives = 72/112 (64%)
Frame = +2 / +3
Query: 893 PGA*QI*GANS*RST*R*DYPSVEPRGDSCSC*GNTRGVGDAPERCIKAYEEVFSEGLRI 1072
P A Q * +NS*R+ * DY +PRGD CS *GNTR +G + C++AYE + GL I
Sbjct: 2601 PRALQT*ASNS*RTK**RDYCPSKPRGDCCSS*GNTRSMGGSQGWCLEAYEGLRGAGLWI 2780
Query: 1073 LS*GAHWSEWS*SAQLWSLQAPAEEWTAWMAGSGA**PNTP*IRLAHAGIWG 1228
L G++ S+W S +LW LQ PAEEW AWMA S A * NT *I +A A I G
Sbjct: 2781 LPRGSYRSKWPQSTELWCLQTPAEEWAAWMASSSAR*LNTS*ICVAPARIRG 2936
Score = 85.4 bits (180), Expect(6) = 9e-86
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +2 / +1
Query: 236 QSACFQWVPTLL*LHHHQKRQFSKC*FST*LLQKGEETISYTSTGVKAPSKTE 394
QS CF+++PTLL* HHH K SKC*FST*LL+K EETIS TS GVK PSK E
Sbjct: 1114 QSTCFKYLPTLL*NHHHHK*TCSKC*FST*LLEKREETISNTSIGVKTPSKRE 1272
Score = 76.7 bits (161), Expect(6) = 9e-86
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +2 / +3
Query: 554 LQILQ*DTRWICWTPFQNVPRNVF**T*GRT*LGKYFC*SCF 679
LQ LQ*DT WICWTPF N+ RNVF *T*G T*LG+YF *SCF
Sbjct: 2262 LQTLQ*DTCWICWTPFPNMQRNVFR*T*GAT*LGRYFG*SCF 2387
Score = 60.6 bits (126), Expect(6) = 9e-86
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = +1 / +2
Query: 1228 SCRKSSRASTGRRRLSLSYAFRAAHKCRRSTKPQ*G*I*GFPPV*KRLKWSSE 1386
+CR R S GR Y FR +CRRSTKPQ* *I* F V*+R KWSSE
Sbjct: 2939 TCRGI*RVSMGRHLRLWRYVFRLVQRCRRSTKPQ*D*I*EFQQV*ERPKWSSE 3097
Score = 53.8 bits (111), Expect(6) = 9e-86
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +2 / +1
Query: 446 WNASPETNTRGIQSVQRKNFAHQQLEEADESSTSERLQIL 565
W+A +T+T IQ V KNFA QQLEEA ES++SER+Q++
Sbjct: 1324 WDADQKTDTSCIQGV*CKNFADQQLEEAYESNSSERMQVI 1443
Score = 39.6 bits (80), Expect(6) = 9e-86
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 725 HPS*PEV*GAPHSCSCGAMHPSWS 796
+PS* EV H CSCG MH SWS
Sbjct: 2433 YPS*SEVCCTSHPCSCGVMHSSWS 2504
Score = 228 bits (493), Expect(4) = 1e-81
Identities = 118/222 (53%), Positives = 128/222 (57%)
Frame = -1 / -1
Query: 1221 IPACARRI*GVLGHQAPLPAIHAVHSSAGA*RLHSCALYDHSLQCAPQDSIRKPSLNTSS 1042
I A A I* VL H+A L AIHA HSSAG *R H+ L H L P SI KP+ + S
Sbjct: 2929 ILAGATHI*EVLSHRALLLAIHAAHSSAGV*RHHNSVLCGHLLLYEPLGSIHKPAPRSPS 2750
Query: 1041 *ALMHRSGASPTPRVFPQQEQLSPLGSTEG*SHRQVLLQELAP*ICQAPGQASHLHLRRQ 862
*A H P RVFPQ EQ SPLG *S ++LQEL +C+A G H HL +Q
Sbjct: 2749 *ASRHHP*LPPMLRVFPQLEQQSPLGLLGQ*SRYHLVLQELDAQVCKALGLVGHPHLHQQ 2570
Query: 861 TLSFRS*QLAFFGALWGTQGGRDQLGCIAPQEQECGAPQTSGHEGCAGLDGPXXXXXXXX 682
T SFR * AFF ALWG Q QL CI PQEQ C QTS HEG A L P
Sbjct: 2569 TRSFRF**WAFFAALWGIQED*LQLECITPQEQGCEVQQTSDHEGYASLSDPLDGRLQPA 2390
Query: 681 XXXXXXKYFPSHVLPYVYQKTFLGTF*KGVQQIQRVSHCNIC 556
KY PSHV PYVY KTFL F KGVQQIQ VSHCN+C
Sbjct: 2389 QKQLQPKYLPSHVAPYVYLKTFLCMFGKGVQQIQHVSHCNVC 2264
Score = 62.5 bits (130), Expect(4) = 1e-81
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = -1 / -1
Query: 1395 TVSFRRPFQPLSNWRESLYLASLWLCTSPALVRRPECI 1282
T FRRPF+PLSN E LYL SLWLCTSPA + +PE I
Sbjct: 3106 TSLFRRPFRPLSNLLEFLYLVSLWLCTSPAPLHQPEHI 2993
Score = 57.4 bits (119), Expect(4) = 1e-81
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = -1 / -3
Query: 372 TPVLV*EMVSSPFWSSYVENQHFENCRF***WSYNKVGTHWKQAL* 235
TP+LV EMVSS F S+ VENQHFE+ ***W +KVG + KQ L*
Sbjct: 1250 TPILVLEMVSSLFSSN*VENQHFEHVHL***WF*SKVGRYLKQVL* 1113
Score = 28.6 bits (56), Expect(4) = 1e-81
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -1 / -3
Query: 516 C**AKFLRCTLCMPLVLVSGLAFHF 442
C* AKFL T CM LV V A HF
Sbjct: 1394 C*SAKFLHYTPCMQLVSVF*SASHF 1320
Score = 61.6 bits (128), Expect(2) = 1e-12
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3 / +1
Query: 525 RLMKVVPVKGCKYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDWGSTFVEAVFLPVEAYHL 704
+LMK V+ C YC E+H+G+ GH R C +R G+H W + ++ + P +HL
Sbjct: 2743 KLMKGYAVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYVWHL 2922
Query: 705 ED 710
+
Sbjct: 2923 PE 2928
Score = 32.2 bits (64), Expect(2) = 1e-12
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3 / +1
Query: 717 GPRIPHDQRFEVPRIPALVELCIQAGLDLPE 809
G + D + + PA+VE+C+QAG +PE
Sbjct: 2932 GEDLQRDLKSFYGQAPAIVEICVQAGAKVPE 3024
Score = 54.2 bits (112), Expect(2) = 3e-10
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3 / +1
Query: 1065 CGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYVWHMPE 1220
C +C E+H+G+ GH R C +R GQH W +++ + P +H+ +
Sbjct: 2263 CRHCSEIHVGSVGHPFRTCKGMSSDKRRGQHDWGGTLVEAVFVPVEAYHLED 2418
Score = 31.3 bits (62), Expect(2) = 3e-10
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3 / +1
Query: 1266 PAVVELCIQGGAQVPE 1313
PA+VELCIQ G +PE
Sbjct: 2470 PALVELCIQAGVNLPE 2517
>LOC_Os04g52520:12004.t04726:unspliced-genomic APO1, putative, expressed|
Length = 4552
Score = 133 bits (286), Expect(4) = 2e-87
Identities = 51/114 (44%), Positives = 70/114 (61%)
Frame = +3 / +2
Query: 555 CKYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDWGSTFVEAVFLPVEAYHLEDRLGPRIPH 734
C+ C ++HVG VGH + C G S +R H W V V +P+E+YH D G R+ H
Sbjct: 1976 CRKCPQVHVGPVGHQIQDCYGTGSQRRNSHHSWVRGSVNDVLIPIESYHQFDPFGWRVKH 2155
Query: 735 DQRFEVPRIPALVELCIQAGLDLPEYPTKRRRKPIVKIGRKEFVDANEDDLPDP 896
+ RF+ RIPA+VELCIQAG++LP+YP++RR P+ IG+K D P P
Sbjct: 2156 ETRFDYDRIPAIVELCIQAGVELPQYPSRRRTAPVRMIGKKVIDRGGFVDGPKP 2317
Score = 120 bits (257), Expect(4) = 2e-87
Identities = 40/66 (60%), Positives = 53/66 (80%)
Frame = +3 / +2
Query: 1017 LRNGALRLMKRYSVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPP 1196
++ G RLM++Y+V+ CGYC EVH+G GH + CGAFKHQ R+G+HGWQ AV+DD+IPP
Sbjct: 2444 VQRGVARLMRKYTVKTCGYCSEVHVGPWGHNVKLCGAFKHQWRDGKHGWQDAVVDDVIPP 2623
Query: 1197 RYVWHM 1214
YVWH+
Sbjct: 2624 NYVWHV 2641
Score = 72.5 bits (152), Expect(4) = 2e-87
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = +3 / +2
Query: 1215 PESGELQKELKSFYGQAPAVVELCIQGGAQVPEKYKATMRLDIGIPSS 1358
P L+ L+SFYG+APAVVELC+Q GA++PE+Y+ MR D+ IP S
Sbjct: 2648 PTGPPLRSSLRSFYGKAPAVVELCVQAGAEIPEEYRPMMRADVVIPDS 2791
Score = 70.3 bits (147), Expect(4) = 2e-87
Identities = 32/86 (37%), Positives = 47/86 (54%)
Frame = +3 / +1
Query: 303 QNADFPRNYSKREKKPFPIPVLELRRRARQRMKEAEGXXXXXXXXXXNGMLVQRLIPEAY 482
QN D P K++KKPFP+P+ ++ + +RQ + A NG+LV LIP AY
Sbjct: 1573 QNVDLPELLPKKKKKPFPVPIKKMLQASRQDKRLARMRIEKPLEPPKNGLLVPELIPVAY 1752
Query: 483 RVYNARILLINNLKRLMKVVPVKGCK 560
V + +LI L +L+ V V GC+
Sbjct: 1753 EVLDNWKVLIRGLSQLLNVGTVYGCR 1830
Score = 52.8 bits (109), Expect(5) = 1e-25
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -3 / -2
Query: 1219 SGMCQTYLGGIRSSSTAACHPCCPFLCWCLK 1127
S C T GG+ SS+TA+CHPC P L WCLK
Sbjct: 2646 SRTCHT*FGGMTSSTTASCHPCLPSLHWCLK 2554
Score = 51.5 bits (106), Expect(5) = 1e-25
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = -3 / -2
Query: 856 FLPILTIGFLRRFVGYSGRSRPAWMHSSTRAGMRGTSNL 740
FLPI+ G +RR GY G S PA MHSST AG+ SNL
Sbjct: 2277 FLPIIRTGAVRRLEGYCGNSTPA*MHSSTMAGILS*SNL 2161
Score = 46.0 bits (94), Expect(5) = 1e-25
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = -3 / -2
Query: 1351 GIPISSLIVALYFSGTCAPP*MHSSTTAGACP*KLL 1244
G+ S+LI+ Y SG AP H+STTAGA P*KLL
Sbjct: 2784 GMTTSALIIGRYSSGISAPACTHNSTTAGALP*KLL 2677
Score = 31.3 bits (62), Expect(5) = 1e-25
Identities = 23/60 (38%), Positives = 26/60 (43%)
Frame = -3 / -3
Query: 568 LQYLQPFTGTTFISLFKLLMSKILALYTLYASGISLWTSIPXXXXXXXXXXFPSASFILC 389
L YLQP T TF S + LMS T A+GIS TS P AS + C
Sbjct: 1838 LSYLQP*TVPTFNS*ERPLMSTFQLSRTS*ATGISSGTSKPFFGGSRGFSIRIRASLLSC 1659
Score = 26.3 bits (51), Expect(5) = 1e-25
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2 / -2
Query: 392 LSCSAP*LQYWYRKWFLLPFGVVTWKISIL 303
LS S L W RKW L W+I+IL
Sbjct: 1662 LSRSLQHLLNWNRKWLLFLLWEQFWEINIL 1573
Score = 97.3 bits (206), Expect = 3e-19
Identities = 43/122 (35%), Positives = 61/122 (50%)
Frame = +3 / +2
Query: 477 AYRVYNARILLINNLKRLMKVVPVKGCKYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDWG 656
A + A + + + RLM+ VK C YCSE+HVG GH + C R G+H W
Sbjct: 2414 AEKTLKAYLNVQRGVARLMRKYTVKTCGYCSEVHVGPWGHNVKLCGAFKHQWRDGKHGWQ 2593
Query: 657 STFVEAVFLPVEAYHLEDRLGPRIPHDQRFEVPRIPALVELCIQAGLDLPEYPTKRRRKP 836
V+ V P +H+ D GP + R + PA+VELC+QAG ++PE R
Sbjct: 2594 DAVVDDVIPPNYVWHVRDPTGPPLRSSLRSFYGKAPAVVELCVQAGAEIPEEYRPMMRAD 2773
Query: 837 IV 842
+V
Sbjct: 2774 VV 2779
Score = 53.8 bits (111), Expect(2) = 2e-11
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3 / +2
Query: 1062 VCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYVWH 1211
VC CP+VH+G GH+ ++C Q+RN H W ++D++ P +H
Sbjct: 1973 VCRKCPQVHVGPVGHQIQDCYGTGSQRRNSHHSWVRGSVNDVLIPIESYH 2122
Score = 36.3 bits (73), Expect(2) = 2e-11
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3 / +2
Query: 1215 PESGELQKELKSFYGQAPAVVELCIQGGAQVPE 1313
P ++ E + Y + PA+VELCIQ G ++P+
Sbjct: 2132 PFGWRVKHETRFDYDRIPAIVELCIQAGVELPQ 2230
Score = 59.7 bits (124), Expect(2) = 2e-08
Identities = 25/58 (43%), Positives = 31/58 (53%)
Frame = +2 / +1
Query: 995 NTRGVGDAPERCIKAYEEVFSEGLRILS*GAHWSEWS*SAQLWSLQAPAEEWTAWMAG 1168
NT + P RC EE+ S+ +R+L *G+ WS LW QAP E AWMAG
Sbjct: 2422 NTESILKCPARCCTVDEEIHSKNMRVLL*GSRWSMGPQCEALWGFQAPVEGRQAWMAG 2595
Score = 43.2 bits (88), Expect(2) = 2e-08
Identities = 30/89 (33%), Positives = 49/89 (55%)
Frame = -2 / -1
Query: 830 SSALCGVLREVETSLDA*LHKSRNAGHLKPLVMRDARA*TVL*VVSFNWQENSFNKSTSP 651
SS+ GVL ++ TSL+A*L+ N +KP M D+ V ++ FN EN + S+ P
Sbjct: 2251 SSSP*GVLWQLNTSLNA*LNDGWNPVIVKPGFMLDSPPKWVKLMIRFNRDENIVDGSSDP 2072
Query: 650 VMFSLTFIRRHSSARSERVSNRSNVYLTA 564
+ ++ + S A + V+N +N+ L A
Sbjct: 2071 RVMAIPTLASCSIAILDLVANWTNMDLGA 1985
Score = 42.3 bits (86), Expect(2) = 2e-08
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = -2 / -1
Query: 1184 VIKHRCLPSMLSIPLLVLEGSTVARFMTTRSNVHLRTVSANPH*IPLHKP 1035
++ H LPSML++P LVLE T + +NV+LR + A + + H+P
Sbjct: 2611 IVHHCILPSMLAVPPLVLESPTELHIVAPWTNVNLRAIPACFYCVFPHQP 2462
Score = 25.8 bits (50), Expect(2) = 2e-08
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1 / +3
Query: 727 SLMTRGLRCPAFLLLWSYASKLVSTSLSTPQSAE 828
S M GL F SYA KLV + +TPQ E
Sbjct: 2148 SSMKPGLTMTGFQPSLSYAFKLVLSCHNTPQGDE 2249
>LOC_Os07g40920:12007.t03751:unspliced-genomic APO2, putative, expressed|
Length = 1459
Score = 124 bits (265), Expect(5) = 9e-68
Identities = 44/73 (60%), Positives = 52/73 (71%)
Frame = +3 / +1
Query: 1008 WETLRNGALRLMKRYSVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDL 1187
W +R GA RLM +Y V CGYCPEV +G GHK R C A KHQQR+GQH WQ A +DDL
Sbjct: 859 WLDMRAGAARLMGKYGVVTCGYCPEVQVGPKGHKVRMCKASKHQQRDGQHAWQEATVDDL 1038
Query: 1188 IPPRYVWHMPESG 1226
+ P YVWH+P +G
Sbjct: 1039 VRPNYVWHVPATG 1077
Score = 73.0 bits (153), Expect(5) = 9e-68
Identities = 27/62 (43%), Positives = 41/62 (66%)
Frame = +3 / +1
Query: 720 PRIPHDQRFEVPRIPALVELCIQAGLDLPEYPTKRRRKPIVKIGRKEFVDANEDDLPDPE 899
PR+ H ++++VPR+PA++ELCIQAG+D+ YP KRR +P+ I + +DD D
Sbjct: 577 PRVSHKEKYDVPRLPAILELCIQAGVDVERYPAKRRTRPVYSIEGRIVDFEPDDDEDDSA 756
Query: 900 PD 905
D
Sbjct: 757 DD 762
Score = 63.4 bits (132), Expect(5) = 9e-68
Identities = 24/42 (57%), Positives = 33/42 (78%)
Frame = +3 / +1
Query: 1230 LQKELKSFYGQAPAVVELCIQGGAQVPEKYKATMRLDIGIPS 1355
L ELK +YG+APAVVELC++ GA VP +Y++ MRLD+ P+
Sbjct: 1105 LANELKRYYGKAPAVVELCVRAGAPVPAQYRSMMRLDVVPPA 1230
Score = 55.1 bits (114), Expect(5) = 9e-68
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3 / +1
Query: 540 VPVKGCKYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDW 653
V V+ C++C E+HVG VGH RTC G S R H W
Sbjct: 394 VAVRRCRFCPEVHVGGVGHEIRTCEGPGSAARNALHVW 507
Score = 30.4 bits (60), Expect(5) = 9e-68
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3 / +1
Query: 309 ADFPRNYSKREKKPFPIPVLELRRRARQRMK 401
AD PR K E+KP+ P+ L RRA++ +
Sbjct: 154 ADVPRPGRKWERKPYVTPMKVLIRRAKEERR 246
Score = 80.3 bits (169), Expect(4) = 1e-28
Identities = 35/67 (52%), Positives = 38/67 (56%)
Frame = -3 / -3
Query: 1225 PDSGMCQTYLGGIRSSSTAACHPCCPFLCWCLKXXXXXXXXXXXPMCTSGQYPQTLTEYL 1046
P +G CQT LG RSS+ A+CH CCP CWCL P CTSGQ P T YL
Sbjct: 1076 PVAGTCQT*LGRTRSSTVASCHACCPSRCWCLLALHIRTLCPFGPTCTSGQ*PHVTTPYL 897
Query: 1045 FISLNAP 1025
ISL AP
Sbjct: 896 PISLAAP 876
Score = 42.3 bits (86), Expect(4) = 1e-28
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = -3 / -3
Query: 1339 SSLIVALYFSGTCAPP*MHSSTTAGACP*KLLSSFCS 1229
SS I+ LY +GT AP SSTTAGA P* L SS S
Sbjct: 1214 SSRIMLLYCAGTGAPARTQSSTTAGALP*YLFSSLAS 1104
Score = 35.4 bits (71), Expect(4) = 1e-28
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -3 / -3
Query: 649 SCSPLRLSEDIPRHVLKGCPTDPTCISLQYLQPFTGT 539
+CS + P HV CPT PTC S Q L T T
Sbjct: 503 TCSAFLAALPGPSHVRISCPTPPTCTSGQNLHRLTAT 393
Score = 35.0 bits (70), Expect(4) = 1e-28
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -3 / -3
Query: 835 GFLRRFVGYSGRSRPAWMHSSTRAGMRGTS 746
G +RR G S PAWM SS AG GTS
Sbjct: 692 GRVRRLAG*RSTSTPAWMQSSRIAGSLGTS 603
Score = 53.3 bits (110), Expect(2) = 4e-10
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +3 / +1
Query: 525 RLMKVVPVKGCKYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDWGSTFVEAVFLPVEAYHL 704
RLM V C YC E+ VG GH R C+ +R G+H W V+ + P +H+
Sbjct: 886 RLMGKYGVVTCGYCPEVQVGPKGHKVRMCKASKHQQRDGQHAWQEATVDDLVRPNYVWHV 1065
Score = 32.2 bits (64), Expect(2) = 4e-10
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3 / +1
Query: 699 HLEDRLGPRIPHDQRFEVPRIPALVELCIQAGLDLPEYPTKRRRKPIVKIGRKE 860
H D P + ++ + + PA+VELC++AG +P R +V R E
Sbjct: 1078 HGGDGGAPPLANELKRYYGKAPAVVELCVRAGAPVPAQYRSMMRLDVVPPARDE 1239
Score = 56.1 bits (116), Expect(2) = 2e-09
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3 / +1
Query: 1053 SVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYVWHM 1214
+VR C +CPEVH+G GH+ R C RN H W+ D++ Y +H+
Sbjct: 397 AVRRCRFCPEVHVGGVGHEIRTCEGPGSAARNALHVWRPGTARDVVGFPYCYHL 558
Score = 26.7 bits (52), Expect(2) = 2e-09
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 1266 PAVVELCIQGGAQV 1307
PA++ELCIQ G V
Sbjct: 619 PAILELCIQAGVDV 660
Score = 46.9 bits (96), Expect = 4e-04
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = -2 / -2
Query: 1211 VPDVSRGY*VIKHRCLPSMLSIPLLVLEGSTVARFMTTRSNVHLRTVSANPH*IPLHKP 1035
VPDV V+ LP +L +PLLVL G + R ++HLR V+A H + H+P
Sbjct: 1062 VPDVVGPDQVVDGGLLPRVLPVPLLVLAGLAHPHLVPLRPDLHLRAVAARHHAVLAHQP 886
>LOC_Os04g53612:12004.t05432:unspliced-genomic expressed protein|
Length = 2345
Score = 108 bits (230), Expect(4) = 2e-56
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +3 / +2
Query: 558 KYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDWGSTFVEAVFLPVEAYHLEDRLGPRIPHD 737
++C E+H+G+VGH ++C G + H WG + + +PVE++HLE+ I HD
Sbjct: 821 RFCPEVHIGAVGHEMQSCHGFKRMIKNQPHKWGPGCLNDILIPVESFHLENTFQDEIKHD 1000
Query: 738 QRFEVPRIPALVELCIQAGLDLPE 809
QRF+ PR+PA++ELC QAG D+P+
Sbjct: 1001 QRFDFPRVPAVLELCHQAGADIPD 1072
Score = 100 bits (212), Expect(4) = 2e-56
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = +3 / +2
Query: 1008 WETLRNGALRLMKRYSVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDL 1187
WE LR G +L+ Y +VC C EVH+G SGHKAR CG FK + G+H W+ A +DDL
Sbjct: 1187 WERLRLGVTKLLLVYPSKVCERCSEVHVGLSGHKARMCGVFKFEGWRGKHKWKKADVDDL 1366
Query: 1188 IPPRYVWH 1211
+PP+ VWH
Sbjct: 1367 VPPKIVWH 1390
Score = 46.4 bits (95), Expect(4) = 2e-56
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3 / +2
Query: 1245 KSFYGQAPAVVELCIQGGAQVPEKYKATMR 1334
+ +YG APAV+ELC+Q GA+ P KY M+
Sbjct: 1430 RDYYGHAPAVIELCMQVGARAPPKYHCMMK 1519
Score = 35.4 bits (71), Expect(4) = 2e-56
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3 / +1
Query: 456 VQRLIPEAYRVYNARILLINNLKRLMKVVPVKGCK 560
++R+IP A V AR ++ + L++VVP+ CK
Sbjct: 367 IKRMIPVAEEVVKAREIVTKGVSTLLQVVPIHSCK 471
Score = 57.9 bits (120), Expect(2) = 1e-11
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3 / +2
Query: 1071 YCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYVWHM 1214
+CPEVHIGA GH+ ++C FK +N H W L+D++ P +H+
Sbjct: 824 FCPEVHIGAVGHEMQSCHGFKRMIKNQPHKWGPGCLNDILIPVESFHL 967
Score = 32.7 bits (65), Expect(2) = 1e-11
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3 / +2
Query: 1227 ELQKELKSFYGQAPAVVELCIQGGAQVPEK 1316
E++ + + + + PAV+ELC Q GA +P++
Sbjct: 986 EIKHDQRFDFPRVPAVLELCHQAGADIPDE 1075
Score = 68.0 bits (142), Expect = 2e-10
Identities = 31/94 (32%), Positives = 45/94 (47%)
Frame = +3 / +2
Query: 525 RLMKVVPVKGCKYCSEIHVGSVGHPFRTCRGMSSDKRKGEHDWGSTFVEAVFLPVEAYHL 704
+L+ V P K C+ CSE+HVG GH R C + +G+H W V+ + P +H
Sbjct: 1214 KLLLVYPSKVCERCSEVHVGLSGHKARMCGVFKFEGWRGKHKWKKADVDDLVPPKIVWHQ 1393
Query: 705 EDRLGPRIPHDQRFEVPRIPALVELCIQAGLDLP 806
P + R PA++ELC+Q G P
Sbjct: 1394 RPHDPPVLVDAGRDYYGHAPAVIELCMQVGARAP 1495
Score = 39.1 bits (79), Expect(4) = 1e-08
Identities = 22/55 (40%), Positives = 25/55 (45%)
Frame = -3 / -3
Query: 808 SGRSRPAWMHSSTRAGMRGTSNLWXXXXXXXXXXXRW*ASTGKKTASTKVLPQSC 644
SG S PA SS+ AG RG SNLW RW STG + + P C
Sbjct: 1071 SGISAPA*WQSSSTAGTRGKSNLWSCFISSWNVFSRWKDSTGIRMSFKHPGPHLC 907
Score = 32.2 bits (64), Expect(4) = 1e-08
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3 / -3
Query: 1210 CQTYLGGIRSSSTAACHPCCP 1148
CQT GG RSS++A H C P
Sbjct: 1389 CQTIFGGTRSSTSAFFHLCLP 1327
Score = 29.5 bits (58), Expect(4) = 1e-08
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3 / -3
Query: 1336 SLIVALYFSGTCAPP*MHSSTTAGACP* 1253
+ I+ YF G AP + SS TAGA P*
Sbjct: 1521 AFIMQWYFGGALAPTCIQSSMTAGA*P* 1438
Score = 24.4 bits (47), Expect(4) = 1e-08
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3 / -1
Query: 574 ISLQYLQPFTGTTFISLFKLLMSKILALYTLYASGI 467
IS YL GTT S+ L++ LAL T A+GI
Sbjct: 485 ISRPYLHECMGTT*SSVETPLVTISLALTTSSATGI 378
>LOC_Os10g02600:12010.t00149:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 2317
Score = 27.2 bits (53), Expect(2) = 9.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1 / -2
Query: 1401 NTTVSFRRPFQPLSNWRESLYLASLWLCTSPALVRRP 1291
N+++SF QP W+ L + L SPA R P
Sbjct: 585 NSSISFSPKPQPYQPWKILLRIGRLRTDPSPARTRSP 475
Score = 22.1 bits (42), Expect(2) = 9.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3 / -3
Query: 1207 QTYLGGIRSSSTAACHPCCPFL 1142
Q LG + + + +ACHP P L
Sbjct: 494 QLALGLLAAWADSACHPTEPLL 429
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 617,549,574
Number of extensions: 9901822
Number of successful extensions: 49210
Number of sequences better than 10.0: 42
Length of query: 537
Length of database: 55,613,886
Length adjustment: 51
Effective length of query: 486
Effective length of database: 52,743,708
Effective search space: 25633442088
Effective search space used: 25633442088
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)