| Clone Name | FLbaf44l05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001054566.1| Oryza sativa (japonica cultivar-group) Os02g0732900 (Os02g0732900) mRNA, complete cds Length = 1752 Score = 668 bits (337), Expect = 0.0 Identities = 954/1159 (82%), Gaps = 3/1159 (0%) Strand = Plus / Plus Query: 231 cgattcagagcgcctgcttccagtgggtcccaaccttgttatagctccatcatcatcaga 290 ||||||||||| |||||||| ||| ||||||||||| | ||| |||||||||||| | Sbjct: 300 cgattcagagcacctgcttcaagtatctcccaaccttgctctagaaccatcatcatcaca 359 Query: 291 aacgacaattctcaaaatgctgattttccacgtaactactccaaaagggagaagaaacca 350 || || || |||||||||||||||||||| ||| ||||| ||||| |||||||||||| Sbjct: 360 aatgaacatgttcaaaatgctgattttccacctaattactcgaaaagagagaagaaacca 419 Query: 351 tttcctataccagtactggagttaaggcgccgagcaagacagaggatgaaagaagctgaa 410 ||||| ||||||||| |||||||||| |||||||||| | ||||| || |||||||| Sbjct: 420 tttccaataccagtattggagttaagacgccgagcaaaagagagggcaaagaaagctgaa 479 Query: 411 gggaagcctaagcggccaccgccacctccaaaaaatggaatgctagtccagagactaata 470 ||||| || || || | ||||||||||||||||| ||||| || | ||||| ||| Sbjct: 480 gggaaacccaaacgatctttaccacctccaaaaaatgggatgctgatcaaaagactgata 539 Query: 471 ccagaggcatacagagtgtacaacgcaagaattttgctcatcaacaacttgaagaggctg 530 |||| ||||||| ||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 540 ccagttgcatacaaggtgtataatgcaagaattttgctgatcaacaacttgaagaggctt 599 Query: 531 atgaaagtagtaccagtgaaaggctgcaaatattgcagtgagatacacgttggatctgtt 590 ||||||||| | ||||||||||| |||||| |||||||||||||||| |||||||||||| Sbjct: 600 atgaaagtaattccagtgaaaggatgcaaacattgcagtgagatacatgttggatctgtt 659 Query: 591 ggacaccctttcagaacgtgccgaggaatgtcttctgataaacgtaagggagaacatgac 650 |||||||||||| |||| ||| |||||||||||| |||||||||| ||| |||||||| Sbjct: 660 ggacaccctttccgaacatgcaaaggaatgtcttcagataaacgtagggggcaacatgac 719 Query: 651 tggggaagtacttttgttgaagctgttttcttgccagttgaagcttaccacctagaggac 710 |||||| ||||||| |||||||||||||| |||| |||||||| ||||| |||||||| Sbjct: 720 tggggaggtactttggttgaagctgtttttgtgccggttgaagcctaccatctagaggat 779 Query: 711 cgtctaggcccgcgcatccctcatgaccagaggtttgaggtgccccgcattcctgctctt 770 || |||| ||| ||||||||||| |||||||||| || || ||||| ||||||||| Sbjct: 780 cgcttagggaagcgtatccctcatgatcagaggtttgctgtacctcgcatccctgctctt 839 Query: 771 gtggagctatgcatccaagctggtctcgacctccctgagtaccccacaaagcgccgaaga 830 |||||| ||||||| |||||||| | | || ||||| |||||||||||||| |||||| Sbjct: 840 gtggagttatgcattcaagctggagttaatcttcctgaataccccacaaagcggcgaaga 899 Query: 831 aagccaattgttaagatcggaaggaaagagtttgtcgacgcaaatgaagatgacttgcct 890 ||||| ||| |||| ||||||| ||| |||||||| || |||||||| |||||| | || Sbjct: 900 aagcccattattaaaatcggaaagaacgagtttgttgatgcaaatgaggatgacctacca 959 Query: 891 gacccggagcctgacaaatttaaggagccaattcttgaagaagtacctgacgatgagatt 950 ||||| |||||| ||||| || || | ||||||||||||||| || ||| | |||||| Sbjct: 960 gacccagagccttacaaacttgagcatccaattcttgaagaactaaatgataacgagatt 1019 Query: 951 atccctccgttgagcccagaggagacagctgctcttgctgaggaaacactcgtggtgtgg 1010 || | || ||||||||||||| | |||||| |||||||||||||||| | ||| Sbjct: 1020 attgccccagcaagcccagaggagattgttgctctagctgaggaaacactcgaagcatgg 1079 Query: 1011 gagacgctccggaacggtgcattaaggcttatgaagaggtattcagtgagggtttgcgga 1070 ||| || || | ||||| || | |||||||||| | || | ||| ||||||| ||| Sbjct: 1080 gaggtagtcagggatggtgccttgaagcttatgaagggctacgcggtgcgggtttgtgga 1139 Query: 1071 tactgtcctgaggtgcacattggagcgagtggtcataaagcgcgcaactgtggagccttc 1130 ||||| || ||||| || || ||||| ||||| || ||||| || || ||||| |||||| Sbjct: 1140 tactgcccagaggttcatataggagcaagtggccacaaagcacggaattgtggtgccttc 1199 Query: 1131 aagcaccagcagaggaatggacagcatggatggcaggcagcggtgcttgatgacctaata 1190 || ||||||||||||||||| |||||||||||||| ||||| ||||| |||||| ||||| Sbjct: 1200 aaacaccagcagaggaatgggcagcatggatggcaagcagcagtgctcgatgacttaata 1259 Query: 1191 ccccctagatacgtctggcacatgccggaatctggggag---ctgcagaaagagctcaag 1247 || |||||||| || |||||| |||| ||||| |||||| |||||| || || ||| Sbjct: 1260 cctcctagatatgtgtggcacctgccagaatccggggaggacttgcagagggatctaaag 1319 Query: 1248 agcttctacgggcaggcgccggctgtcgttgagctatgcattcagggcggcgcacaagtg 1307 || ||||| |||||||| || || | || ||| |||| |||||| || ||| | ||| Sbjct: 1320 agtttctatgggcaggcacctgcgattgtggagatatgtgttcaggctggtgcaaaggtg 1379 Query: 1308 ccggagaagtacaaagccacaatgaggctagatatagggattccctccagtttgaaagag 1367 |||||||||||||||||||||||||| ||||||||||| ||||| | ||||||| |||| Sbjct: 1380 ccggagaagtacaaagccacaatgagactagatataggaattccaacaagtttgagagag 1439 Query: 1368 gctgaaatggtcgtctgaa 1386 || |||||||||||||||| Sbjct: 1440 gccgaaatggtcgtctgaa 1458 Score = 69.9 bits (35), Expect = 3e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 145 gctgcttcgtcggcctccggtggtctgccccccgcgtccaggtcagg 191 ||||||||||||||||||||||||| || |||||| ||||||||||| Sbjct: 199 gctgcttcgtcggcctccggtggtccgctccccgcatccaggtcagg 245
>dbj|AK104342.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B08, full insert sequence Length = 1684 Score = 652 bits (329), Expect = 0.0 Identities = 952/1159 (82%), Gaps = 3/1159 (0%) Strand = Plus / Plus Query: 231 cgattcagagcgcctgcttccagtgggtcccaaccttgttatagctccatcatcatcaga 290 ||||||||||| |||||||| ||| ||||||||||| | ||| |||||||||||| | Sbjct: 300 cgattcagagcacctgcttcaagtatctcccaaccttgctctagaaccatcatcatcaca 359 Query: 291 aacgacaattctcaaaatgctgattttccacgtaactactccaaaagggagaagaaacca 350 || || || |||||||||||||||||||| ||| ||||| ||||| |||||||||||| Sbjct: 360 aatgaacatgttcaaaatgctgattttccacctaattactcgaaaagagagaagaaacca 419 Query: 351 tttcctataccagtactggagttaaggcgccgagcaagacagaggatgaaagaagctgaa 410 ||||| ||||||||| |||||||||| |||||||||| | ||||| || |||||||| Sbjct: 420 tttccaataccagtattggagttaagacgccgagcaaaagagagggcaaagaaagctgaa 479 Query: 411 gggaagcctaagcggccaccgccacctccaaaaaatggaatgctagtccagagactaata 470 ||||| || || || | ||||||||||||||||| ||||| || | ||||| ||| Sbjct: 480 gggaaacccaaacgatctttaccacctccaaaaaatgggatgctgatcaaaagactgata 539 Query: 471 ccagaggcatacagagtgtacaacgcaagaattttgctcatcaacaacttgaagaggctg 530 |||| ||||||| ||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 540 ccagttgcatacaaggtgtataatgcaagaattttgctgatcaacaacttgaagaggctt 599 Query: 531 atgaaagtagtaccagtgaaaggctgcaaatattgcagtgagatacacgttggatctgtt 590 ||||||||| | ||||||||||| |||| | |||||||||||||||| |||||||||||| Sbjct: 600 atgaaagtaattccagtgaaaggatgcagacattgcagtgagatacatgttggatctgtt 659 Query: 591 ggacaccctttcagaacgtgccgaggaatgtcttctgataaacgtaagggagaacatgac 650 |||||||||||| |||| ||| |||||||||||| |||||||||| ||| |||||||| Sbjct: 660 ggacaccctttccgaacatgcaaaggaatgtcttcagataaacgtagggggcaacatgac 719 Query: 651 tggggaagtacttttgttgaagctgttttcttgccagttgaagcttaccacctagaggac 710 |||||| ||||||| |||||||||||||| |||| |||||||| ||||| |||||||| Sbjct: 720 tggggaggtactttggttgaagctgtttttgtgccggttgaagcctaccatctagaggat 779 Query: 711 cgtctaggcccgcgcatccctcatgaccagaggtttgaggtgccccgcattcctgctctt 770 || |||| ||| ||||||||||| |||||||||| || || ||||| ||||||||| Sbjct: 780 cgcttagggaagcgtatccctcatgatcagaggtttgctgtacctcgcatccctgctctt 839 Query: 771 gtggagctatgcatccaagctggtctcgacctccctgagtaccccacaaagcgccgaaga 830 |||||| ||||||| |||||||| | | || ||||| |||||||||||||| |||||| Sbjct: 840 gtggagttatgcattcaagctggagttaatcttcctgaataccccacaaagcggcgaaga 899 Query: 831 aagccaattgttaagatcggaaggaaagagtttgtcgacgcaaatgaagatgacttgcct 890 ||||| ||| |||| ||||||| ||| |||||||| || |||||||| |||||| | || Sbjct: 900 aagcccattattaaaatcggaaagaacgagtttgttgatgcaaatgaggatgacctacca 959 Query: 891 gacccggagcctgacaaatttaaggagccaattcttgaagaagtacctgacgatgagatt 950 ||||| |||||| ||||| || || | ||||||||||||||| || ||| | |||||| Sbjct: 960 gacccagagccttacaaacttgagcatccaattcttgaagaactaaatgataacgagatt 1019 Query: 951 atccctccgttgagcccagaggagacagctgctcttgctgaggaaacactcgtggtgtgg 1010 || | || ||||||||||||| | |||||| |||||||||||||||| | ||| Sbjct: 1020 attgccccagcaagcccagaggagattgttgctctagctgaggaaacactcgaagcatgg 1079 Query: 1011 gagacgctccggaacggtgcattaaggcttatgaagaggtattcagtgagggtttgcgga 1070 ||| || || | ||||| || | |||||||||| | || | ||| ||||||| ||| Sbjct: 1080 gaggtagtcagggatggtgccttgaagcttatgaagggctacgcggtgcgggtttgtgga 1139 Query: 1071 tactgtcctgaggtgcacattggagcgagtggtcataaagcgcgcaactgtggagccttc 1130 ||||| || ||||| || || ||||| ||||| || ||||| || || ||||| |||||| Sbjct: 1140 tactgcccagaggttcatataggagcaagtggccacaaagcacggaattgtggtgccttc 1199 Query: 1131 aagcaccagcagaggaatggacagcatggatggcaggcagcggtgcttgatgacctaata 1190 || ||||||||||||||||| |||||||||||||| ||||| ||||| |||| | ||||| Sbjct: 1200 aaacaccagcagaggaatgggcagcatggatggcaagcagcagtgctcgatgtcttaata 1259 Query: 1191 ccccctagatacgtctggcacatgccggaatctggggag---ctgcagaaagagctcaag 1247 || |||||||| || |||||| |||| ||||| |||||| |||||| || || ||| Sbjct: 1260 cctcctagatatgtgtggcacctgccagaatccggggaggacttgcagagggatctaaag 1319 Query: 1248 agcttctacgggcaggcgccggctgtcgttgagctatgcattcagggcggcgcacaagtg 1307 || ||||| |||||||| || || | || ||| |||| |||||| || ||| | ||| Sbjct: 1320 agtttctatgggcaggcacctgcgattgtggagatatgtgttcaggctggtgcaaaggtg 1379 Query: 1308 ccggagaagtacaaagccacaatgaggctagatatagggattccctccagtttgaaagag 1367 |||||||||||||||||||||||||| ||||||||||| ||||| | ||||||| |||| Sbjct: 1380 ccggagaagtacaaagccacaatgagactagatataggaattccaacaagtttgagagag 1439 Query: 1368 gctgaaatggtcgtctgaa 1386 || |||||||||||||||| Sbjct: 1440 gccgaaatggtcgtctgaa 1458 Score = 69.9 bits (35), Expect = 3e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 145 gctgcttcgtcggcctccggtggtctgccccccgcgtccaggtcagg 191 ||||||||||||||||||||||||| || |||||| ||||||||||| Sbjct: 199 gctgcttcgtcggcctccggtggtccgctccccgcatccaggtcagg 245
>dbj|AK065796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041F02, full insert sequence Length = 1752 Score = 652 bits (329), Expect = 0.0 Identities = 953/1159 (82%), Gaps = 4/1159 (0%) Strand = Plus / Plus Query: 231 cgattcagagcgcctgcttccagtgggtcccaaccttgttatagctccatcatcatcaga 290 ||||||||||| |||||||| ||| ||||||||||| | ||| |||||||||||| | Sbjct: 301 cgattcagagcacctgcttcaagtatctcccaaccttgctctagaaccatcatcatcaca 360 Query: 291 aacgacaattctcaaaatgctgattttccacgtaactactccaaaagggagaagaaacca 350 || || || |||||||||||||||||||| ||| ||||| ||||| |||||||||||| Sbjct: 361 aatgaacatgttcaaaatgctgattttccacctaattactcgaaaagagagaagaaacca 420 Query: 351 tttcctataccagtactggagttaaggcgccgagcaagacagaggatgaaagaagctgaa 410 ||||| ||||||||| |||||||||| |||||||||| | ||||| || |||||||| Sbjct: 421 tttccaataccagtattggagttaagacgccgagcaaaagagagggcaaagaaagctgaa 480 Query: 411 gggaagcctaagcggccaccgccacctccaaaaaatggaatgctagtccagagactaata 470 ||||| || || || | ||||||||||||||||| ||||| || | ||||| ||| Sbjct: 481 gggaaacccaaacgatctttaccacctccaaaaaatgggatgctgatcaaaagactgata 540 Query: 471 ccagaggcatacagagtgtacaacgcaagaattttgctcatcaacaacttgaagaggctg 530 |||| ||||||| ||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 541 ccagttgcatacaaggtgtataatgcaagaattttgctgatcaacaacttgaagaggctt 600 Query: 531 atgaaagtagtaccagtgaaaggctgcaaatattgcagtgagatacacgttggatctgtt 590 ||||||||| | ||||||||||| |||||| |||||||||||||||| |||||||||||| Sbjct: 601 atgaaagtaattccagtgaaaggatgcaaacattgcagtgagatacatgttggatctgtt 660 Query: 591 ggacaccctttcagaacgtgccgaggaatgtcttctgataaacgtaagggagaacatgac 650 |||||||||||| |||| ||| |||||||||||| |||||||||| ||| |||||||| Sbjct: 661 ggacaccctttccgaacatgcaaaggaatgtcttcagataaacgtagggggcaacatgac 720 Query: 651 tggggaagtacttttgttgaagctgttttcttgccagttgaagcttaccacctagaggac 710 |||||| ||||||| |||||||||||||| |||| |||||||| ||||| |||||||| Sbjct: 721 tggggaggtactttggttgaagctgtttttgtgccggttgaagcctaccatctagaggat 780 Query: 711 cgtctaggcccgcgcatccctcatgaccagaggtttgaggtgccccgcattcctgctctt 770 || |||| ||| ||||||||||| |||||||||| || || ||||| ||||||||| Sbjct: 781 cgcttagggaagcgtatccctcatgatcagaggtttgctgtacctcgcatccctgctctt 840 Query: 771 gtggagctatgcatccaagctggtctcgacctccctgagtaccccacaaagcgccgaaga 830 |||||| ||||||| |||||||| | | || ||||| |||||||||||||| |||||| Sbjct: 841 gtggagttatgcattcaagctggagttaatcttcctgaataccccacaaagcggcgaaga 900 Query: 831 aagccaattgttaagatcggaaggaaagagtttgtcgacgcaaatgaagatgacttgcct 890 ||||| ||| |||| ||||||| ||| |||||||| || |||||||| |||||| | || Sbjct: 901 aagcccattattaaaatcggaaagaacgagtttgttgatgcaaatgaggatgacctacca 960 Query: 891 gacccggagcctgacaaatttaaggagccaattcttgaagaagtacctgacgatgagatt 950 ||||| |||||| ||||| || || | ||||||||||||||| || ||| | |||||| Sbjct: 961 gacccagagccttacaaacttgagcatccaattcttgaagaactaaatgataacgagatt 1020 Query: 951 atccctccgttgagcccagaggagacagctgctcttgctgaggaaacactcgtggtgtgg 1010 || | || ||||||||||||| | |||||| |||||||||||||||| | ||| Sbjct: 1021 attgccccagcaagcccagaggagattgttgctctagctgaggaaacactcgaagcatgg 1080 Query: 1011 gagacgctccggaacggtgcattaaggcttatgaagaggtattcagtgagggtttgcgga 1070 ||| || || | ||||| || | |||||||||| | || | ||| ||||||| ||| Sbjct: 1081 gaggtagtcagggatggtgccttgaagcttatgaagggctacgcggtgcgggtttgtgga 1140 Query: 1071 tactgtcctgaggtgcacattggagcgagtggtcataaagcgcgcaactgtggagccttc 1130 ||||| || ||||| || || ||||| ||||| || ||||| || || ||||| |||||| Sbjct: 1141 tactgcccagaggttcatataggagcaagtggccacaaagcacggaattgtggtgccttc 1200 Query: 1131 aagcaccagcagaggaatggacagcatggatggcaggcagcggtgcttgatgacctaata 1190 || | ||||||||||||||| |||||||||||||| ||||| ||||| |||||| ||||| Sbjct: 1201 aaac-ccagcagaggaatgggcagcatggatggcaagcagcagtgctcgatgacttaata 1259 Query: 1191 ccccctagatacgtctggcacatgccggaatctggggag---ctgcagaaagagctcaag 1247 || |||||||| || |||||| |||| ||||| |||||| |||||| || || ||| Sbjct: 1260 cctcctagatatgtgtggcacctgccagaatccggggaggacttgcagagggatctaaag 1319 Query: 1248 agcttctacgggcaggcgccggctgtcgttgagctatgcattcagggcggcgcacaagtg 1307 || ||||| |||||||| || || | || ||| |||| |||||| || ||| | ||| Sbjct: 1320 agtttctatgggcaggcacctgcgattgtggagatatgtgttcaggctggtgcaaaggtg 1379 Query: 1308 ccggagaagtacaaagccacaatgaggctagatatagggattccctccagtttgaaagag 1367 |||||||||||||||||||||||||| ||||||||||| ||||| | ||||||| |||| Sbjct: 1380 ccggagaagtacaaagccacaatgagactagatataggaattccaacaagtttgagagag 1439 Query: 1368 gctgaaatggtcgtctgaa 1386 || |||||||||||||||| Sbjct: 1440 gccgaaatggtcgtctgaa 1458 Score = 69.9 bits (35), Expect = 3e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 145 gctgcttcgtcggcctccggtggtctgccccccgcgtccaggtcagg 191 ||||||||||||||||||||||||| || |||||| ||||||||||| Sbjct: 200 gctgcttcgtcggcctccggtggtccgctccccgcatccaggtcagg 246
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 456 bits (230), Expect = e-124 Identities = 679/828 (82%), Gaps = 3/828 (0%) Strand = Plus / Plus Query: 562 attgcagtgagatacacgttggatctgttggacaccctttcagaacgtgccgaggaatgt 621 |||||||||||||||| |||||||||||||||||||||||| |||| ||| |||||||| Sbjct: 30578320 attgcagtgagatacatgttggatctgttggacaccctttccgaacatgcaaaggaatgt 30578379 Query: 622 cttctgataaacgtaagggagaacatgactggggaagtacttttgttgaagctgttttct 681 |||| |||||||||| ||| |||||||||||||| ||||||| |||||||||||||| Sbjct: 30578380 cttcagataaacgtagggggcaacatgactggggaggtactttggttgaagctgtttttg 30578439 Query: 682 tgccagttgaagcttaccacctagaggaccgtctaggcccgcgcatccctcatgaccaga 741 |||| |||||||| ||||| |||||||| || |||| ||| ||||||||||| |||| Sbjct: 30578440 tgccggttgaagcctaccatctagaggatcgcttagggaagcgtatccctcatgatcaga 30578499 Query: 742 ggtttgaggtgccccgcattcctgctcttgtggagctatgcatccaagctggtctcgacc 801 |||||| || || ||||| ||||||||||||||| ||||||| |||||||| | | | Sbjct: 30578500 ggtttgctgtacctcgcatccctgctcttgtggagttatgcattcaagctggagttaatc 30578559 Query: 802 tccctgagtaccccacaaagcgccgaagaaagccaattgttaagatcggaaggaaagagt 861 | ||||| |||||||||||||| ||||||||||| ||| |||| ||||||| ||| |||| Sbjct: 30578560 ttcctgaataccccacaaagcggcgaagaaagcccattattaaaatcggaaagaacgagt 30578619 Query: 862 ttgtcgacgcaaatgaagatgacttgcctgacccggagcctgacaaatttaaggagccaa 921 |||| || |||||||| |||||| | || ||||| |||||| ||||| || || | |||| Sbjct: 30578620 ttgttgatgcaaatgaggatgacctaccagacccagagccttacaaacttgagcatccaa 30578679 Query: 922 ttcttgaagaagtacctgacgatgagattatccctccgttgagcccagaggagacagctg 981 ||||||||||| || ||| | |||||||| | || ||||||||||||| | || Sbjct: 30578680 ttcttgaagaactaaatgataacgagattattgccccagcaagcccagaggagattgttg 30578739 Query: 982 ctcttgctgaggaaacactcgtggtgtgggagacgctccggaacggtgcattaaggctta 1041 |||| |||||||||||||||| | |||||| || || | ||||| || | ||||| Sbjct: 30578740 ctctagctgaggaaacactcgaagcatgggaggtagtcagggatggtgccttgaagctta 30578799 Query: 1042 tgaagaggtattcagtgagggtttgcggatactgtcctgaggtgcacattggagcgagtg 1101 ||||| | || | ||| ||||||| |||||||| || ||||| || || ||||| |||| Sbjct: 30578800 tgaagggctacgcggtgcgggtttgtggatactgcccagaggttcatataggagcaagtg 30578859 Query: 1102 gtcataaagcgcgcaactgtggagccttcaagcaccagcagaggaatggacagcatggat 1161 | || ||||| || || ||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 30578860 gccacaaagcacggaattgtggtgccttcaaacaccagcagaggaatgggcagcatggat 30578919 Query: 1162 ggcaggcagcggtgcttgatgacctaataccccctagatacgtctggcacatgccggaat 1221 |||| ||||| ||||| |||||| ||||||| |||||||| || |||||| |||| |||| Sbjct: 30578920 ggcaagcagcagtgctcgatgacttaatacctcctagatatgtgtggcacctgccagaat 30578979 Query: 1222 ctggggag---ctgcagaaagagctcaagagcttctacgggcaggcgccggctgtcgttg 1278 | |||||| |||||| || || ||||| ||||| |||||||| || || | || | Sbjct: 30578980 ccggggaggacttgcagagggatctaaagagtttctatgggcaggcacctgcgattgtgg 30579039 Query: 1279 agctatgcattcagggcggcgcacaagtgccggagaagtacaaagccacaatgaggctag 1338 || |||| |||||| || ||| | ||||||||||||||||||||||||||||| |||| Sbjct: 30579040 agatatgtgttcaggctggtgcaaaggtgccggagaagtacaaagccacaatgagactag 30579099 Query: 1339 atatagggattccctccagtttgaaagaggctgaaatggtcgtctgaa 1386 ||||||| ||||| | ||||||| |||||| |||||||||||||||| Sbjct: 30579100 atataggaattccaacaagtttgagagaggccgaaatggtcgtctgaa 30579147 Score = 210 bits (106), Expect = 1e-50 Identities = 271/326 (83%) Strand = Plus / Plus Query: 234 ttcagagcgcctgcttccagtgggtcccaaccttgttatagctccatcatcatcagaaac 293 |||||||| |||||||| ||| ||||||||||| | ||| |||||||||||| ||| Sbjct: 30577162 ttcagagcacctgcttcaagtatctcccaaccttgctctagaaccatcatcatcacaaat 30577221 Query: 294 gacaattctcaaaatgctgattttccacgtaactactccaaaagggagaagaaaccattt 353 || || |||||||||||||||||||| ||| ||||| ||||| ||||||||||||||| Sbjct: 30577222 gaacatgttcaaaatgctgattttccacctaattactcgaaaagagagaagaaaccattt 30577281 Query: 354 cctataccagtactggagttaaggcgccgagcaagacagaggatgaaagaagctgaaggg 413 || ||||||||| |||||||||| |||||||||| | ||||| || ||||||||||| Sbjct: 30577282 ccaataccagtattggagttaagacgccgagcaaaagagagggcaaagaaagctgaaggg 30577341 Query: 414 aagcctaagcggccaccgccacctccaaaaaatggaatgctagtccagagactaatacca 473 || || || || | ||||||||||||||||| ||||| || | ||||| |||||| Sbjct: 30577342 aaacccaaacgatctttaccacctccaaaaaatgggatgctgatcaaaagactgatacca 30577401 Query: 474 gaggcatacagagtgtacaacgcaagaattttgctcatcaacaacttgaagaggctgatg 533 | ||||||| ||||| || |||||||||||||| |||||||||||||||||||| ||| Sbjct: 30577402 gttgcatacaaggtgtataatgcaagaattttgctgatcaacaacttgaagaggcttatg 30577461 Query: 534 aaagtagtaccagtgaaaggctgcaa 559 |||||| | ||||||||||| ||||| Sbjct: 30577462 aaagtaattccagtgaaaggatgcaa 30577487 Score = 61.9 bits (31), Expect = 7e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 145 gctgcttcgtcggcctccggtggtctgccccccgcgtccaggt 187 ||||||||||||||||||||||||| || |||||| ||||||| Sbjct: 30576249 gctgcttcgtcggcctccggtggtccgctccccgcatccaggt 30576291
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 456 bits (230), Expect = e-124 Identities = 679/828 (82%), Gaps = 3/828 (0%) Strand = Plus / Plus Query: 562 attgcagtgagatacacgttggatctgttggacaccctttcagaacgtgccgaggaatgt 621 |||||||||||||||| |||||||||||||||||||||||| |||| ||| |||||||| Sbjct: 90328 attgcagtgagatacatgttggatctgttggacaccctttccgaacatgcaaaggaatgt 90387 Query: 622 cttctgataaacgtaagggagaacatgactggggaagtacttttgttgaagctgttttct 681 |||| |||||||||| ||| |||||||||||||| ||||||| |||||||||||||| Sbjct: 90388 cttcagataaacgtagggggcaacatgactggggaggtactttggttgaagctgtttttg 90447 Query: 682 tgccagttgaagcttaccacctagaggaccgtctaggcccgcgcatccctcatgaccaga 741 |||| |||||||| ||||| |||||||| || |||| ||| ||||||||||| |||| Sbjct: 90448 tgccggttgaagcctaccatctagaggatcgcttagggaagcgtatccctcatgatcaga 90507 Query: 742 ggtttgaggtgccccgcattcctgctcttgtggagctatgcatccaagctggtctcgacc 801 |||||| || || ||||| ||||||||||||||| ||||||| |||||||| | | | Sbjct: 90508 ggtttgctgtacctcgcatccctgctcttgtggagttatgcattcaagctggagttaatc 90567 Query: 802 tccctgagtaccccacaaagcgccgaagaaagccaattgttaagatcggaaggaaagagt 861 | ||||| |||||||||||||| ||||||||||| ||| |||| ||||||| ||| |||| Sbjct: 90568 ttcctgaataccccacaaagcggcgaagaaagcccattattaaaatcggaaagaacgagt 90627 Query: 862 ttgtcgacgcaaatgaagatgacttgcctgacccggagcctgacaaatttaaggagccaa 921 |||| || |||||||| |||||| | || ||||| |||||| ||||| || || | |||| Sbjct: 90628 ttgttgatgcaaatgaggatgacctaccagacccagagccttacaaacttgagcatccaa 90687 Query: 922 ttcttgaagaagtacctgacgatgagattatccctccgttgagcccagaggagacagctg 981 ||||||||||| || ||| | |||||||| | || ||||||||||||| | || Sbjct: 90688 ttcttgaagaactaaatgataacgagattattgccccagcaagcccagaggagattgttg 90747 Query: 982 ctcttgctgaggaaacactcgtggtgtgggagacgctccggaacggtgcattaaggctta 1041 |||| |||||||||||||||| | |||||| || || | ||||| || | ||||| Sbjct: 90748 ctctagctgaggaaacactcgaagcatgggaggtagtcagggatggtgccttgaagctta 90807 Query: 1042 tgaagaggtattcagtgagggtttgcggatactgtcctgaggtgcacattggagcgagtg 1101 ||||| | || | ||| ||||||| |||||||| || ||||| || || ||||| |||| Sbjct: 90808 tgaagggctacgcggtgcgggtttgtggatactgcccagaggttcatataggagcaagtg 90867 Query: 1102 gtcataaagcgcgcaactgtggagccttcaagcaccagcagaggaatggacagcatggat 1161 | || ||||| || || ||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 90868 gccacaaagcacggaattgtggtgccttcaaacaccagcagaggaatgggcagcatggat 90927 Query: 1162 ggcaggcagcggtgcttgatgacctaataccccctagatacgtctggcacatgccggaat 1221 |||| ||||| ||||| |||||| ||||||| |||||||| || |||||| |||| |||| Sbjct: 90928 ggcaagcagcagtgctcgatgacttaatacctcctagatatgtgtggcacctgccagaat 90987 Query: 1222 ctggggag---ctgcagaaagagctcaagagcttctacgggcaggcgccggctgtcgttg 1278 | |||||| |||||| || || ||||| ||||| |||||||| || || | || | Sbjct: 90988 ccggggaggacttgcagagggatctaaagagtttctatgggcaggcacctgcgattgtgg 91047 Query: 1279 agctatgcattcagggcggcgcacaagtgccggagaagtacaaagccacaatgaggctag 1338 || |||| |||||| || ||| | ||||||||||||||||||||||||||||| |||| Sbjct: 91048 agatatgtgttcaggctggtgcaaaggtgccggagaagtacaaagccacaatgagactag 91107 Query: 1339 atatagggattccctccagtttgaaagaggctgaaatggtcgtctgaa 1386 ||||||| ||||| | ||||||| |||||| |||||||||||||||| Sbjct: 91108 atataggaattccaacaagtttgagagaggccgaaatggtcgtctgaa 91155 Score = 210 bits (106), Expect = 1e-50 Identities = 271/326 (83%) Strand = Plus / Plus Query: 234 ttcagagcgcctgcttccagtgggtcccaaccttgttatagctccatcatcatcagaaac 293 |||||||| |||||||| ||| ||||||||||| | ||| |||||||||||| ||| Sbjct: 89170 ttcagagcacctgcttcaagtatctcccaaccttgctctagaaccatcatcatcacaaat 89229 Query: 294 gacaattctcaaaatgctgattttccacgtaactactccaaaagggagaagaaaccattt 353 || || |||||||||||||||||||| ||| ||||| ||||| ||||||||||||||| Sbjct: 89230 gaacatgttcaaaatgctgattttccacctaattactcgaaaagagagaagaaaccattt 89289 Query: 354 cctataccagtactggagttaaggcgccgagcaagacagaggatgaaagaagctgaaggg 413 || ||||||||| |||||||||| |||||||||| | ||||| || ||||||||||| Sbjct: 89290 ccaataccagtattggagttaagacgccgagcaaaagagagggcaaagaaagctgaaggg 89349 Query: 414 aagcctaagcggccaccgccacctccaaaaaatggaatgctagtccagagactaatacca 473 || || || || | ||||||||||||||||| ||||| || | ||||| |||||| Sbjct: 89350 aaacccaaacgatctttaccacctccaaaaaatgggatgctgatcaaaagactgatacca 89409 Query: 474 gaggcatacagagtgtacaacgcaagaattttgctcatcaacaacttgaagaggctgatg 533 | ||||||| ||||| || |||||||||||||| |||||||||||||||||||| ||| Sbjct: 89410 gttgcatacaaggtgtataatgcaagaattttgctgatcaacaacttgaagaggcttatg 89469 Query: 534 aaagtagtaccagtgaaaggctgcaa 559 |||||| | ||||||||||| ||||| Sbjct: 89470 aaagtaattccagtgaaaggatgcaa 89495 Score = 61.9 bits (31), Expect = 7e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 145 gctgcttcgtcggcctccggtggtctgccccccgcgtccaggt 187 ||||||||||||||||||||||||| || |||||| ||||||| Sbjct: 88257 gctgcttcgtcggcctccggtggtccgctccccgcatccaggt 88299
>gb|BT017646.1| Zea mays clone EL01N0439B12.c mRNA sequence Length = 630 Score = 305 bits (154), Expect = 3e-79 Identities = 303/352 (86%), Gaps = 3/352 (0%) Strand = Plus / Plus Query: 1037 gcttatgaagaggtattcagtgagggtttgcggatactgtcctgaggtgcacattggagc 1096 |||||||||| | ||| ||||||||||||| |||||||| ||||||||||| |||| | Sbjct: 83 gcttatgaagggctatgcagtgagggtttgtggatactgccctgaggtgcatgttgggcc 142 Query: 1097 gagtggtcataaagcgcgcaactgtggagccttcaagcaccagcagaggaatggacagca 1156 | ||| || ||||| || ||||||||||| || ||||||||||||||||||||||| || Sbjct: 143 aactggccacaaagcacggaactgtggagcttttaagcaccagcagaggaatggacaaca 202 Query: 1157 tggatggcaggcagcggtgcttgatgacctaataccccctagatacgtctggcacatgcc 1216 ||||||||| ||||||||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 203 tggatggcaagcagcggtgctcgatgacctgatacctcctaggtacgtgtggcacatgcc 262 Query: 1217 ggaatctggggag---ctgcagaaagagctcaagagcttctacgggcaggcgccggctgt 1273 |||||| ||||| ||||||| ||||| |||| ||||||||| ||||| || ||||| Sbjct: 263 ggaatcgggggaagaactgcagagggagctaaagaccttctacggtcaggcaccagctgt 322 Query: 1274 cgttgagctatgcattcagggcggcgcacaagtgccggagaagtacaaagccacaatgag 1333 |||||| | ||||||||||| |||||| |||| |||||||||||||||||||| ||||| Sbjct: 323 tgttgagatgtgcattcagggtggcgcaaaagttccggagaagtacaaagccactatgag 382 Query: 1334 gctagatatagggattccctccagtttgaaagaggctgaaatggtcgtctga 1385 ||||| ||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct: 383 actagacataggaattccctctagcttgaaggaggctgaaatggtcgtctga 434
>ref|NM_125178.4| Arabidopsis thaliana APO2 (ACCUMULATION OF PHOTOSYSTEM ONE 2) (APO2) mRNA, complete cds Length = 1544 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1116 aactgtggagccttcaagcaccagcagaggaatggacagcatggatggca 1165 |||||||| || ||||||||||| ||| ||||||| |||||||| ||||| Sbjct: 1130 aactgtggtgcattcaagcaccaacagcggaatggccagcatggttggca 1179 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1269 gctgtcgttgagctatgcattcagggcggcg 1299 ||||| |||||||| |||||||||||||||| Sbjct: 779 gctgtagttgagctctgcattcagggcggcg 809
>ref|NM_180877.1| Arabidopsis thaliana APO2 (ACCUMULATION OF PHOTOSYSTEM ONE 2) (APO2) mRNA, complete cds Length = 1548 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1116 aactgtggagccttcaagcaccagcagaggaatggacagcatggatggca 1165 |||||||| || ||||||||||| ||| ||||||| |||||||| ||||| Sbjct: 1134 aactgtggtgcattcaagcaccaacagcggaatggccagcatggttggca 1183 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1269 gctgtcgttgagctatgcattcagggcggcg 1299 ||||| |||||||| |||||||||||||||| Sbjct: 783 gctgtagttgagctctgcattcagggcggcg 813
>gb|BT015612.1| Arabidopsis thaliana At5g57930 mRNA sequence Length = 763 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1116 aactgtggagccttcaagcaccagcagaggaatggacagcatggatggca 1165 |||||||| || ||||||||||| ||| ||||||| |||||||| ||||| Sbjct: 488 aactgtggtgcattcaagcaccaacagcggaatggccagcatggttggca 537
>gb|AY114672.1| Arabidopsis thaliana unknown protein (At5g57930) mRNA, complete cds Length = 1365 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1116 aactgtggagccttcaagcaccagcagaggaatggacagcatggatggca 1165 |||||||| || ||||||||||| ||| ||||||| |||||||| ||||| Sbjct: 1048 aactgtggtgcattcaagcaccaacagcggaatggccagcatggttggca 1097 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1269 gctgtcgttgagctatgcattcagggcggcg 1299 ||||| |||||||| |||||||||||||||| Sbjct: 697 gctgtagttgagctctgcattcagggcggcg 727
>gb|AY062701.1| Arabidopsis thaliana Unknown protein (At5g57930; MTI20.19) mRNA, complete cds Length = 1459 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1116 aactgtggagccttcaagcaccagcagaggaatggacagcatggatggca 1165 |||||||| || ||||||||||| ||| ||||||| |||||||| ||||| Sbjct: 1134 aactgtggtgcattcaagcaccaacagcggaatggccagcatggttggca 1183 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1269 gctgtcgttgagctatgcattcagggcggcg 1299 ||||| |||||||| |||||||||||||||| Sbjct: 783 gctgtagttgagctctgcattcagggcggcg 813
>dbj|AB013396.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTI20 Length = 79676 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1116 aactgtggagccttcaagcaccagcagaggaatggacagcatggatggca 1165 |||||||| || ||||||||||| ||| ||||||| |||||||| ||||| Sbjct: 52842 aactgtggtgcattcaagcaccaacagcggaatggccagcatggttggca 52891 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1269 gctgtcgttgagctatgcattcagggcggcg 1299 ||||| |||||||| |||||||||||||||| Sbjct: 52491 gctgtagttgagctctgcattcagggcggcg 52521
>emb|BX831804.1|CNS09ZTA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1502 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1116 aactgtggagccttcaagcaccagcagaggaatggacagcatggatggca 1165 |||||||| || ||||||||||| ||| ||||||| |||||||| ||||| Sbjct: 1118 aactgtggtgcattcaagcaccaacagcggaatggccagcatggttggca 1167 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1269 gctgtcgttgagctatgcattcagggcggcg 1299 ||||| |||||||| |||||||||||||||| Sbjct: 767 gctgtagttgagctctgcattcagggcggcg 797
>emb|BX831443.1|CNS09ZJ7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1469 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1116 aactgtggagccttcaagcaccagcagaggaatggacagcatggatggca 1165 |||||||| || ||||||||||| ||| ||||||| |||||||| ||||| Sbjct: 1123 aactgtggtgcattcaagcaccaacagcggaatggccagcatggttggca 1172 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1269 gctgtcgttgagctatgcattcagggcggcg 1299 ||||| |||||||| |||||||||||||||| Sbjct: 772 gctgtagttgagctctgcattcagggcggcg 802
>emb|CT868719.5| Mouse DNA sequence from clone RP23-275N7 on chromosome X, complete sequence Length = 209802 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Minus Query: 393 aggatgaaagaagctgaagggaag 416 |||||||||||||||||||||||| Sbjct: 189812 aggatgaaagaagctgaagggaag 189789
>emb|CR556706.7| Mouse DNA sequence from clone RP23-105E20 on chromosome X, complete sequence Length = 201020 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Plus Query: 393 aggatgaaagaagctgaagggaag 416 |||||||||||||||||||||||| Sbjct: 133274 aggatgaaagaagctgaagggaag 133297 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 aggatgaaagaagctgaagggaagc 417 |||||| |||||||||||||||||| Sbjct: 55497 aggatggaagaagctgaagggaagc 55473
>emb|CR556704.4| Mouse DNA sequence from clone RP23-324J18 on chromosome X, complete sequence Length = 199507 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Plus Query: 393 aggatgaaagaagctgaagggaag 416 |||||||||||||||||||||||| Sbjct: 128048 aggatgaaagaagctgaagggaag 128071
>gb|AC140440.3| Mus musculus BAC clone RP23-71A13 from chromosome unknown, complete sequence Length = 199043 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Minus Query: 393 aggatgaaagaagctgaagggaag 416 |||||||||||||||||||||||| Sbjct: 10501 aggatgaaagaagctgaagggaag 10478
>gb|AC140928.5| Mus musculus BAC clone RP23-352C6 from chromosome unknown, complete sequence Length = 187448 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Minus Query: 393 aggatgaaagaagctgaagggaag 416 |||||||||||||||||||||||| Sbjct: 170362 aggatgaaagaagctgaagggaag 170339
>emb|BX322592.7| Mouse DNA sequence from clone RP23-209C19 on chromosome X, complete sequence Length = 72444 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Plus Query: 393 aggatgaaagaagctgaagggaag 416 |||||||||||||||||||||||| Sbjct: 64872 aggatgaaagaagctgaagggaag 64895
>emb|CR556711.3| Mouse DNA sequence from clone RP23-415J12 on chromosome X, complete sequence Length = 195389 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Plus Query: 393 aggatgaaagaagctgaagggaag 416 |||||||||||||||||||||||| Sbjct: 80128 aggatgaaagaagctgaagggaag 80151
>emb|AL929496.10| Mouse DNA sequence from clone RP23-3D2 on chromosome X, complete sequence Length = 254072 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Plus Query: 393 aggatgaaagaagctgaagggaag 416 |||||||||||||||||||||||| Sbjct: 215741 aggatgaaagaagctgaagggaag 215764
>emb|BX813310.2| Mouse DNA sequence from clone RP23-450L10 on chromosome X, complete sequence Length = 42597 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Minus Query: 393 aggatgaaagaagctgaagggaag 416 |||||||||||||||||||||||| Sbjct: 7573 aggatgaaagaagctgaagggaag 7550
>emb|BX321876.5| Mouse DNA sequence from clone RP23-441P15 on chromosome X, complete sequence Length = 195629 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Plus Query: 393 aggatgaaagaagctgaagggaag 416 |||||||||||||||||||||||| Sbjct: 23301 aggatgaaagaagctgaagggaag 23324
>emb|AL672071.9| Mouse DNA sequence from clone RP23-367O24 on chromosome X, complete sequence Length = 199416 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Plus Query: 393 aggatgaaagaagctgaagggaag 416 |||||||||||||||||||||||| Sbjct: 11275 aggatgaaagaagctgaagggaag 11298
>gb|AF375421.1| Arabidopsis thaliana AT5g57930/MTI20_19 gene, partial cds Length = 831 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1269 gctgtcgttgagctatgcattcagggcggcg 1299 ||||| |||||||| |||||||||||||||| Sbjct: 779 gctgtagttgagctctgcattcagggcggcg 809
>emb|CU019603.9| M.truncatula DNA sequence from clone MTH2-139F11 on chromosome 3, complete sequence Length = 107844 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 338 ggagaagaaaccatttcctata 359 |||||||||||||||||||||| Sbjct: 52230 ggagaagaaaccatttcctata 52251
>gb|AC133571.47| Medicago truncatula clone mth2-10h12, complete sequence Length = 85905 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 338 ggagaagaaaccatttcctata 359 |||||||||||||||||||||| Sbjct: 45088 ggagaagaaaccatttcctata 45109
>emb|CT868731.19| Mouse DNA sequence from clone RP23-188M20 on chromosome X, complete sequence Length = 228029 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 393 aggatgaaagaagctgaagggaagc 417 |||||| |||||||||||||||||| Sbjct: 60767 aggatggaagaagctgaagggaagc 60791
>gb|AC155320.3| Pan troglodytes BAC clone CH251-421K1 from chromosome 16, complete sequence Length = 185966 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1320 aaagccacaatgaggctagatatag 1344 ||||||||||||||||||| ||||| Sbjct: 82837 aaagccacaatgaggctagttatag 82861
>gb|AC189692.1| Pan troglodytes chromosome 16 clone CH251-551B22, complete sequence Length = 192943 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1320 aaagccacaatgaggctagatatag 1344 ||||||||||||||||||| ||||| Sbjct: 142587 aaagccacaatgaggctagttatag 142611
>gb|AC147638.2| Mus musculus BAC clone RP23-181L5 from chromosome 7, complete sequence Length = 196114 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 330 tccaaaagggagaagaaacca 350 ||||||||||||||||||||| Sbjct: 190701 tccaaaagggagaagaaacca 190681
>gb|AC151830.3| Mus musculus BAC clone RP24-76I23 from chromosome 7, complete sequence Length = 212931 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 330 tccaaaagggagaagaaacca 350 ||||||||||||||||||||| Sbjct: 144079 tccaaaagggagaagaaacca 144059
>ref|NM_178891.3| Mus musculus protein arginine N-methyltransferase 6 (Prmt6), mRNA gb|BC066221.1| Mus musculus protein arginine N-methyltransferase 6, mRNA (cDNA clone MGC:76783 IMAGE:30436952), complete cds Length = 3049 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gagcgcctgcttccagtgggt 258 ||||||||||||||||||||| Sbjct: 980 gagcgcctgcttccagtgggt 960
>gb|BC022899.1| Mus musculus protein arginine N-methyltransferase 6, mRNA (cDNA clone MGC:30554 IMAGE:5067159), complete cds Length = 2188 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gagcgcctgcttccagtgggt 258 ||||||||||||||||||||| Sbjct: 987 gagcgcctgcttccagtgggt 967
>dbj|AK157132.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830203L13 product:Similar to protein arginine N-methyltransferase 6 homolog [Mus musculus], full insert sequence Length = 3011 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gagcgcctgcttccagtgggt 258 ||||||||||||||||||||| Sbjct: 957 gagcgcctgcttccagtgggt 937
>dbj|AK172003.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830028H18 product:Similar to protein arginine N-methyltransferase 6, full insert sequence Length = 2444 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gagcgcctgcttccagtgggt 258 ||||||||||||||||||||| Sbjct: 995 gagcgcctgcttccagtgggt 975
>dbj|AK172105.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830037A16 product:Similar to protein arginine N-methyltransferase 6, full insert sequence Length = 2183 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gagcgcctgcttccagtgggt 258 ||||||||||||||||||||| Sbjct: 1003 gagcgcctgcttccagtgggt 983
>dbj|AK172722.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830305J23 product:Similar to protein arginine N-methyltransferase 6, full insert sequence Length = 2183 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gagcgcctgcttccagtgggt 258 ||||||||||||||||||||| Sbjct: 1003 gagcgcctgcttccagtgggt 983
>gb|AC011542.9| Homo sapiens chromosome 19 clone LLNLR-259F3, complete sequence Length = 39958 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 785 ccaagctggtctcgacctccc 805 ||||||||||||||||||||| Sbjct: 5608 ccaagctggtctcgacctccc 5628
>dbj|AK087608.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230024D23 product:ARGININE METHYLTRANSFERASE 6 homolog [Homo sapiens], full insert sequence Length = 3058 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gagcgcctgcttccagtgggt 258 ||||||||||||||||||||| Sbjct: 1002 gagcgcctgcttccagtgggt 982
>dbj|AK087551.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130318J19 product:hypothetical S-adenosyl-L-methionine-dependent methyltransferases structure containing protein, full insert sequence Length = 2605 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gagcgcctgcttccagtgggt 258 ||||||||||||||||||||| Sbjct: 548 gagcgcctgcttccagtgggt 528
>dbj|AK034732.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430029P12 product:ARGININE METHYLTRANSFERASE 6 homolog [Homo sapiens], full insert sequence Length = 2422 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gagcgcctgcttccagtgggt 258 ||||||||||||||||||||| Sbjct: 975 gagcgcctgcttccagtgggt 955
>dbj|AK075617.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001M03 product:Similar to protein arginine N-methyltransferase 6 homolog [Mus musculus], full insert sequence Length = 1643 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gagcgcctgcttccagtgggt 258 ||||||||||||||||||||| Sbjct: 459 gagcgcctgcttccagtgggt 439
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1157 tggatggcaggcagcggtgct 1177 ||||||||||||||||||||| Sbjct: 5136244 tggatggcaggcagcggtgct 5136264
>emb|AL031655.8|HS134N8 Human DNA sequence from clone RP1-134N8 on chromosome 20p12 Contains STSs, GSSs and a CpG island, complete sequence Length = 156325 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 661 cttttgttgaagctgttttct 681 ||||||||||||||||||||| Sbjct: 18845 cttttgttgaagctgttttct 18825
>emb|AL031733.3|HS455J7 Human DNA sequence from clone RP3-455J7 on chromosome 1q24 Contains the 5' end of the CD3Z gene for CD3Z antigen zeta polypeptide (TiT3 complex), an aldo-keto reductase family 1 member D1 (delta 4-3-ketosteroid-5-beta-reductase) (AKR1D1) pseudogene, the CREG gene for cellular repressor of E1A-stimulated genes, a ribosomal protein S18 (RPS18) pseudogene, a novel gene, the 5' end of the gene for a novel protein and a CpG island, complete sequence Length = 215861 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 390 cagaggatgaaagaagctgaaggga 414 |||||| |||||||||||||||||| Sbjct: 181207 cagagggtgaaagaagctgaaggga 181183
>gb|DQ072717.1| Homo sapiens CD3Z antigen, zeta polypeptide (TiT3 complex) (CD3Z) gene, complete cds Length = 90859 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 390 cagaggatgaaagaagctgaaggga 414 |||||| |||||||||||||||||| Sbjct: 2590 cagagggtgaaagaagctgaaggga 2566
>gb|AC134250.4| Mus musculus BAC clone RP23-406L17 from chromosome unknown, complete sequence Length = 168403 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 aggatgaaagaagctgaagggaagc 417 |||||| |||||||||||||||||| Sbjct: 100528 aggatggaagaagctgaagggaagc 100504
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1157 tggatggcaggcagcggtgct 1177 ||||||||||||||||||||| Sbjct: 95282 tggatggcaggcagcggtgct 95302
>gb|AC009161.14| Homo sapiens chromosome 16 clone RP11-75D3, complete sequence Length = 180222 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1320 aaagccacaatgaggctagatatag 1344 ||||||||||||||||||| ||||| Sbjct: 12061 aaagccacaatgaggctagttatag 12085
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1157 tggatggcaggcagcggtgct 1177 ||||||||||||||||||||| Sbjct: 2966 tggatggcaggcagcggtgct 2986
>gb|AC124319.13| Homo sapiens chromosome 17, clone CTD-2047H16, complete sequence Length = 121112 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1233 cagaaagagctcaagagcttc 1253 ||||||||||||||||||||| Sbjct: 36105 cagaaagagctcaagagcttc 36085
>gb|AC142115.3| Mus musculus BAC clone RP23-327M1 from 3, complete sequence Length = 174667 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gagcgcctgcttccagtgggt 258 ||||||||||||||||||||| Sbjct: 18763 gagcgcctgcttccagtgggt 18743
>gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complete sequence Length = 198621 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 gagcgcctgcttccagtgggt 258 ||||||||||||||||||||| Sbjct: 7003 gagcgcctgcttccagtgggt 7023 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 269,044,187 Number of extensions: 15586116 Number of successful extensions: 293335 Number of sequences better than 10.0: 55 Number of HSP's gapped: 293323 Number of HSP's successfully gapped: 90 Length of query: 1611 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1588 Effective length of database: 18,503,978,556 Effective search space: 29384317946928 Effective search space used: 29384317946928 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)