ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf47j15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF067732.1|AF067732 Hordeum vulgare ribosomal protein S12 (rps12) mRNA, complete cds Length = 760 Score = 1358 bits (685), Expect = 0.0 Identities = 688/689 (99%) Strand = Plus / Plus Query: 56 gctccagatctccctccctcgtagtttcctcggtggccttttgagcggacgagatggcgg 115 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 46 gctccagatctccctccctcgtagtttcctcggtggtcttttgagcggacgagatggcgg 105 Query: 116 aagaagccccagcaccagttgttgccccagtcgaggcacctaccccgattcttggtgagc 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 aagaagccccagcaccagttgttgccccagtcgaggcacctaccccgattcttggtgagc 165 Query: 176 caatggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcc 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 caatggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcc 225 Query: 236 ttgtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtg 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 ttgtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtg 285 Query: 296 tgctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctg 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 tgctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctg 345 Query: 356 agcacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 agcacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggc 405 Query: 416 tttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttg 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 tttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttg 465 Query: 476 tcaaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaagtctc 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 tcaaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaagtctc 525 Query: 536 aatagttgagaatgtttcatcatgcaaaacttgtgttgggcattttggtccttggtttaa 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 aatagttgagaatgtttcatcatgcaaaacttgtgttgggcattttggtccttggtttaa 585 Query: 596 ttatgcttttgttcttgggcttatactgttacaagtttcaagtgtgagcctagcagatat 655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 586 ttatgcttttgttcttgggcttatactgttacaagtttcaagtgtgagcctagcagatat 645 Query: 656 tgttgatttggacatttgagcctttgtttatcaggcagctgctgcctttagcgtaaatca 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 tgttgatttggacatttgagcctttgtttatcaggcagctgctgcctttagcgtaaatca 705 Query: 716 tcaagagctgataatataattctctttgc 744 ||||||||||||||||||||||||||||| Sbjct: 706 tcaagagctgataatataattctctttgc 734
>gb|DQ244511.1| Zea mays clone 8695 mRNA sequence Length = 779 Score = 1031 bits (520), Expect = 0.0 Identities = 696/750 (92%), Gaps = 11/750 (1%) Strand = Plus / Plus Query: 3 acacctgccgtactcgcgaaaaccctaccgccgccgctctcta-------aggtcccaag 55 ||||||||| ||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 1 acacctgccctactcgcgaaaaccctaccgccgccgctctccattctccaaggtcccaag 60 Query: 56 gctccagatctccctccctcgtagtttcctcggtggccttttgagcggacgagatggcgg 115 ||||||||||||||||| ||| || | |||||||||||||| ||||| |||||||||||| Sbjct: 61 gctccagatctccctccttcgcagctgcctcggtggcctttggagcgcacgagatggcgg 120 Query: 116 aagaagccccagcaccagttgttgccccagtcgaggcacctaccccgattcttggtgagc 175 |||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 121 aagaagccccgacaccagttgttgccccagtagaggcacctaccccggttcttggtgagc 180 Query: 176 caatggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcc 235 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cgatggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcc 240 Query: 236 ttgtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtg 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ttgtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtg 300 Query: 296 tgctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctg 355 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 301 tgctggctgaggattgtgaccagcctgattacgtgaagctcgttaaggcactatgcgctg 360 Query: 356 agcacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggc 415 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 361 agcacaatgttcacctggttactgtgccaagtgctaaaactcttggagagtgggcagggc 420 Query: 416 tttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttg 475 |||||||||| ||| ||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 421 tttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcttgcgttgttg 480 Query: 476 tcaaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaagtctc 535 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 481 tcaaggactatggtgaagaatccgagggccttaacatcgtgcaggagtacgtcaagtctc 540 Query: 536 aatagttgagaatgtttcatcatgcaaa-acttgtgttgggcattttggtccttggttt- 593 | ||| |||||||||||||| ||||||| | ||| |||||||||||| ||||| ||||| Sbjct: 541 actagatgagaatgtttcatgatgcaaacatttgggttgggcatttttgtcctcggtttc 600 Query: 594 aattatgcttttgttcttgggctt-atactgttacaagtttcaagtgtgagcctagcaga 652 | |||||| ||| ||||||||||| || |||| ||| |||||||||||||||||||||| Sbjct: 601 atttatgc-tttattcttgggcttcctattgttccaactttcaagtgtgagcctagcaga 659 Query: 653 tattgttgatttggacatttgagcctttgtttatcaggcagctgctgcctttagcgtaaa 712 ||| || ||||||||| | ||| |||||||||||||||||||||||||||| || ||||| Sbjct: 660 tatcgtcgatttggacctctgaacctttgtttatcaggcagctgctgccttaagggtaaa 719 Query: 713 tcatcaagagctgataatataattctcttt 742 |||||||||||| |||||||| |||||||| Sbjct: 720 tcatcaagagctaataatatatttctcttt 749
>emb|CT833894.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA012I24, full insert sequence Length = 724 Score = 430 bits (217), Expect = e-117 Identities = 334/373 (89%) Strand = Plus / Plus Query: 158 ccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatgaagaagt 217 ||||| ||||||| ||||| ||||| ||||||||||||| |||||||| |||||||||| Sbjct: 147 ccccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagt 206 Query: 218 caagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagc 277 |||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 207 caagtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagc 266 Query: 278 atgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttg 337 |||||||||||||||||||||| |||||||| || ||||| |||||||| || ||| | | Sbjct: 267 atgctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttgg 326 Query: 338 ttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactc 397 ||||||| || || |||||||||||||||||||| ||||| ||||| |||||||| |||| Sbjct: 327 ttaaggctctgtgtgctgagcacaatgttcaccttgttaccgtgcctagtgctaagactc 386 Query: 398 tcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtag 457 | || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | Sbjct: 387 ttggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgg 446 Query: 458 gctgctcttgcattgttgtcaaggactatggtgaagaatccgagggccttaacatcgtgc 517 ||||||| ||| | ||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 447 gctgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgc 506 Query: 518 agcagtatgtcaa 530 || | |||||||| Sbjct: 507 aggactatgtcaa 519
>emb|CT833893.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA012I23, full insert sequence Length = 724 Score = 430 bits (217), Expect = e-117 Identities = 334/373 (89%) Strand = Plus / Plus Query: 158 ccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatgaagaagt 217 ||||| ||||||| ||||| ||||| ||||||||||||| |||||||| |||||||||| Sbjct: 147 ccccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagt 206 Query: 218 caagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagc 277 |||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 207 caagtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagc 266 Query: 278 atgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttg 337 |||||||||||||||||||||| |||||||| || ||||| |||||||| || ||| | | Sbjct: 267 atgctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttgg 326 Query: 338 ttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactc 397 ||||||| || || |||||||||||||||||||| ||||| ||||| |||||||| |||| Sbjct: 327 ttaaggctctgtgtgctgagcacaatgttcaccttgttaccgtgcctagtgctaagactc 386 Query: 398 tcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtag 457 | || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | Sbjct: 387 ttggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgg 446 Query: 458 gctgctcttgcattgttgtcaaggactatggtgaagaatccgagggccttaacatcgtgc 517 ||||||| ||| | ||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 447 gctgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgc 506 Query: 518 agcagtatgtcaa 530 || | |||||||| Sbjct: 507 aggactatgtcaa 519
>ref|NM_001065434.1| Oryza sativa (japonica cultivar-group) Os07g0150200 (Os07g0150200) mRNA, complete cds Length = 733 Score = 422 bits (213), Expect = e-115 Identities = 333/373 (89%) Strand = Plus / Plus Query: 158 ccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatgaagaagt 217 ||||| ||||||| ||||| ||||| ||||||||||||| |||||||| |||||||||| Sbjct: 134 ccccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagt 193 Query: 218 caagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagc 277 |||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 194 caagtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagc 253 Query: 278 atgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttg 337 |||||||||||||||||||||| |||||||| || ||||| |||||||| || ||| | | Sbjct: 254 atgctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttgg 313 Query: 338 ttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactc 397 ||||||| || || ||||||||||| |||||||| ||||| ||||| |||||||| |||| Sbjct: 314 ttaaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactc 373 Query: 398 tcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtag 457 | || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | Sbjct: 374 ttggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgg 433 Query: 458 gctgctcttgcattgttgtcaaggactatggtgaagaatccgagggccttaacatcgtgc 517 ||||||| ||| | ||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 434 gctgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgc 493 Query: 518 agcagtatgtcaa 530 || | |||||||| Sbjct: 494 aggactatgtcaa 506
>dbj|AK121635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051C16, full insert sequence Length = 734 Score = 422 bits (213), Expect = e-115 Identities = 333/373 (89%) Strand = Plus / Plus Query: 158 ccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatgaagaagt 217 ||||| ||||||| ||||| ||||| ||||||||||||| |||||||| |||||||||| Sbjct: 135 ccccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagt 194 Query: 218 caagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagc 277 |||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 195 caagtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagc 254 Query: 278 atgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttg 337 |||||||||||||||||||||| |||||||| || ||||| |||||||| || ||| | | Sbjct: 255 atgctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttgg 314 Query: 338 ttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactc 397 ||||||| || || ||||||||||| |||||||| ||||| ||||| |||||||| |||| Sbjct: 315 ttaaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactc 374 Query: 398 tcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtag 457 | || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | Sbjct: 375 ttggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgg 434 Query: 458 gctgctcttgcattgttgtcaaggactatggtgaagaatccgagggccttaacatcgtgc 517 ||||||| ||| | ||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 435 gctgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgc 494 Query: 518 agcagtatgtcaa 530 || | |||||||| Sbjct: 495 aggactatgtcaa 507
>dbj|AK058680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-A01, full insert sequence Length = 730 Score = 422 bits (213), Expect = e-115 Identities = 333/373 (89%) Strand = Plus / Plus Query: 158 ccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatgaagaagt 217 ||||| ||||||| ||||| ||||| ||||||||||||| |||||||| |||||||||| Sbjct: 131 ccccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagt 190 Query: 218 caagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagc 277 |||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 191 caagtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagc 250 Query: 278 atgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttg 337 |||||||||||||||||||||| |||||||| || ||||| |||||||| || ||| | | Sbjct: 251 atgctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttgg 310 Query: 338 ttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactc 397 ||||||| || || ||||||||||| |||||||| ||||| ||||| |||||||| |||| Sbjct: 311 ttaaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactc 370 Query: 398 tcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtag 457 | || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | Sbjct: 371 ttggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgg 430 Query: 458 gctgctcttgcattgttgtcaaggactatggtgaagaatccgagggccttaacatcgtgc 517 ||||||| ||| | ||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 431 gctgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgc 490 Query: 518 agcagtatgtcaa 530 || | |||||||| Sbjct: 491 aggactatgtcaa 503
>ref|NM_001065764.1| Oryza sativa (japonica cultivar-group) Os07g0229900 (Os07g0229900) mRNA, complete cds Length = 753 Score = 408 bits (206), Expect = e-110 Identities = 338/382 (88%) Strand = Plus / Plus Query: 152 cacctaccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatga 211 ||||| ||||| ||||||| ||||| |||||| ||||||||||||| |||||||| |||| Sbjct: 144 cacctgccccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatga 203 Query: 212 agaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattg 271 |||||||||| ||||||||||| || |||||||||||||||||||| |||||| |||||| Sbjct: 204 agaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattg 263 Query: 272 agaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtga 331 |||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| || | Sbjct: 264 agaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtca 323 Query: 332 agcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgcta 391 || | || |||||||| ||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 324 agttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgcta 383 Query: 392 aaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaagg 451 ||||||| || ||||||||||||||||||||||| || ||||||||||||| ||||||| Sbjct: 384 aaactcttggcgagtgggcagggctttgcaagattgattctgagggcaaggcgaggaagg 443 Query: 452 ttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatccgagggccttaaca 511 | ||||||||||| ||| | ||||||||||||| |||||||| || |||||||| |||| Sbjct: 444 tcgtaggctgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaaca 503 Query: 512 tcgtgcagcagtatgtcaagtc 533 | || ||| | ||||||||||| Sbjct: 504 tagtccaggactatgtcaagtc 525
>dbj|AK121720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080B09, full insert sequence Length = 754 Score = 408 bits (206), Expect = e-110 Identities = 338/382 (88%) Strand = Plus / Plus Query: 152 cacctaccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatga 211 ||||| ||||| ||||||| ||||| |||||| ||||||||||||| |||||||| |||| Sbjct: 145 cacctgccccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatga 204 Query: 212 agaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattg 271 |||||||||| ||||||||||| || |||||||||||||||||||| |||||| |||||| Sbjct: 205 agaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattg 264 Query: 272 agaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtga 331 |||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| || | Sbjct: 265 agaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtca 324 Query: 332 agcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgcta 391 || | || |||||||| ||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 325 agttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgcta 384 Query: 392 aaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaagg 451 ||||||| || ||||||||||||||||||||||| || ||||||||||||| ||||||| Sbjct: 385 aaactcttggcgagtgggcagggctttgcaagattgattctgagggcaaggcgaggaagg 444 Query: 452 ttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatccgagggccttaaca 511 | ||||||||||| ||| | ||||||||||||| |||||||| || |||||||| |||| Sbjct: 445 tcgtaggctgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaaca 504 Query: 512 tcgtgcagcagtatgtcaagtc 533 | || ||| | ||||||||||| Sbjct: 505 tagtccaggactatgtcaagtc 526
>dbj|AK059090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B10, full insert sequence Length = 751 Score = 408 bits (206), Expect = e-110 Identities = 338/382 (88%) Strand = Plus / Plus Query: 152 cacctaccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatga 211 ||||| ||||| ||||||| ||||| |||||| ||||||||||||| |||||||| |||| Sbjct: 148 cacctgccccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatga 207 Query: 212 agaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattg 271 |||||||||| ||||||||||| || |||||||||||||||||||| |||||| |||||| Sbjct: 208 agaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattg 267 Query: 272 agaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtga 331 |||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| || | Sbjct: 268 agaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtca 327 Query: 332 agcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgcta 391 || | || |||||||| ||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 328 agttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgcta 387 Query: 392 aaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaagg 451 ||||||| || ||||||||||||||||||||||| || ||||||||||||| ||||||| Sbjct: 388 aaactcttggcgagtgggcagggctttgcaagattgattctgagggcaaggcgaggaagg 447 Query: 452 ttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatccgagggccttaaca 511 | ||||||||||| ||| | ||||||||||||| |||||||| || |||||||| |||| Sbjct: 448 tcgtaggctgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaaca 507 Query: 512 tcgtgcagcagtatgtcaagtc 533 | || ||| | ||||||||||| Sbjct: 508 tagtccaggactatgtcaagtc 529
>gb|DQ244291.1| Zea mays clone 4281 mRNA sequence Length = 659 Score = 402 bits (203), Expect = e-109 Identities = 338/383 (88%) Strand = Plus / Plus Query: 148 gaggcacctaccccgattcttggtgagccaatggacttgatgactgctctacagcttgtc 207 ||||||||||||||| ||||||| || || |||||| |||||||||| || ||||| ||| Sbjct: 35 gaggcacctaccccggttcttggggaaccgatggacctgatgactgccctgcagctcgtc 94 Query: 208 atgaagaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtcc 267 |||||||||||| ||||||||||||||||||||||||| || |||||||||||||| || Sbjct: 95 atgaagaagtcaggtgctcatgatggccttgtgaagggtcttcgtgaggctgccaaagcc 154 Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 327 || ||||||||||| |||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 155 atcgagaagcatgccgctcagctctgcgtgcttgccgaggactgcgaccagcctgattat 214 Query: 328 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 387 || ||||| || ||||| || ||||||||||||||||| ||||||||||||||||| || Sbjct: 215 gtcaagctggtgaaggctctctgcgctgagcacaatgtccacctggttactgtgcctagc 274 Query: 388 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 447 || |||||||| ||||||||||| |||||||||||||||||| ||||||||||||| ||| Sbjct: 275 gccaaaactcttggagagtgggctgggctttgcaagatcgactctgagggcaaggcgagg 334 Query: 448 aaggttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatccgagggcctt 507 ||||||||||||||||| || |||||||||||||||| || |||||||| || |||||| Sbjct: 335 aaggttgtaggctgctcctgtgttgttgtcaaggactacggcgaagaatctgaaggcctt 394 Query: 508 aacatcgtgcagcagtatgtcaa 530 ||||| |||||| |||| ||||| Sbjct: 395 aacatagtgcaggagtacgtcaa 417
>gb|AY104036.1| Zea mays PCO068483 mRNA sequence Length = 845 Score = 402 bits (203), Expect = e-109 Identities = 338/383 (88%) Strand = Plus / Plus Query: 148 gaggcacctaccccgattcttggtgagccaatggacttgatgactgctctacagcttgtc 207 ||||||||||||||| ||||||| || || |||||| |||||||||| || ||||| ||| Sbjct: 189 gaggcacctaccccggttcttggggaaccgatggacctgatgactgccctgcagctcgtc 248 Query: 208 atgaagaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtcc 267 |||||||||||| ||||||||||||||||||||||||| || |||||||||||||| || Sbjct: 249 atgaagaagtcaggtgctcatgatggccttgtgaagggtcttcgtgaggctgccaaagcc 308 Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 327 || ||||||||||| |||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 309 atcgagaagcatgccgctcagctctgcgtgcttgccgaggactgcgaccagcctgattat 368 Query: 328 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 387 || ||||| || ||||| || ||||||||||||||||| ||||||||||||||||| || Sbjct: 369 gtcaagctggtgaaggctctctgcgctgagcacaatgtccacctggttactgtgcctagc 428 Query: 388 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 447 || |||||||| ||||||||||| |||||||||||||||||| ||||||||||||| ||| Sbjct: 429 gccaaaactcttggagagtgggctgggctttgcaagatcgactctgagggcaaggcgagg 488 Query: 448 aaggttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatccgagggcctt 507 ||||||||||||||||| || |||||||||||||||| || |||||||| || |||||| Sbjct: 489 aaggttgtaggctgctcctgtgttgttgtcaaggactacggcgaagaatctgaaggcctt 548 Query: 508 aacatcgtgcagcagtatgtcaa 530 ||||| |||||| |||| ||||| Sbjct: 549 aacatagtgcaggagtacgtcaa 571
>gb|DQ244770.1| Zea mays clone 10578 mRNA sequence Length = 736 Score = 394 bits (199), Expect = e-106 Identities = 343/391 (87%) Strand = Plus / Plus Query: 143 cagtcgaggcacctaccccgattcttggtgagccaatggacttgatgactgctctacagc 202 |||| |||||||| ||||| ||||||| ||||||||||||||||||||||| || |||| Sbjct: 134 cagttgaggcaccaaccccagttcttggagagccaatggacttgatgactgcgctgcagc 193 Query: 203 ttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgcca 262 | || |||||||||||||||||||||||||| ||||||||||| || || |||||||||| Sbjct: 194 tggtgatgaagaagtcaagtgctcatgatggacttgtgaagggtcttcgcgaggctgcca 253 Query: 263 agtccattgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctg 322 || |||||||||||||||||||||||||||| || || |||||||| ||||||||||| | Sbjct: 254 aggccattgagaagcatgctgctcagctttgcgttcttgctgaggactgtgaccagccag 313 Query: 323 attacgtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgc 382 |||| || ||||| || ||||| || || ||||| |||||||||||||| || ||||| | Sbjct: 314 attatgtcaagctggtgaaggcgctctgtgctgaacacaatgttcaccttgtcactgttc 373 Query: 383 caagtgctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaagg 442 | |||||| ||||| || |||||||| |||||||||||||| ||| | |||||||||| Sbjct: 374 ctgctgctaagactcttggcgagtgggctgggctttgcaagattgactccgagggcaagg 433 Query: 443 caaggaaggttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatccgagg 502 |||||||||||||||||||||| || | |||||||||||||| ||||||||||| |||| Sbjct: 434 caaggaaggttgtaggctgctcctgtgtcgttgtcaaggactacggtgaagaatctgagg 493 Query: 503 gccttaacatcgtgcagcagtatgtcaagtc 533 |||||||||| |||||| ||||||||||||| Sbjct: 494 gccttaacatagtgcaggagtatgtcaagtc 524
>gb|AY109069.1| Zea mays PCO128954 mRNA sequence Length = 755 Score = 394 bits (199), Expect = e-106 Identities = 343/391 (87%) Strand = Plus / Plus Query: 143 cagtcgaggcacctaccccgattcttggtgagccaatggacttgatgactgctctacagc 202 |||| |||||||| ||||| ||||||| ||||||||||||||||||||||| || |||| Sbjct: 154 cagttgaggcaccaaccccagttcttggagagccaatggacttgatgactgcgctgcagc 213 Query: 203 ttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgcca 262 | || |||||||||||||||||||||||||| ||||||||||| || || |||||||||| Sbjct: 214 tggtgatgaagaagtcaagtgctcatgatggacttgtgaagggtcttcgcgaggctgcca 273 Query: 263 agtccattgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctg 322 || |||||||||||||||||||||||||||| || || |||||||| ||||||||||| | Sbjct: 274 aggccattgagaagcatgctgctcagctttgcgttcttgctgaggactgtgaccagccag 333 Query: 323 attacgtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgc 382 |||| || ||||| || ||||| || || ||||| |||||||||||||| || ||||| | Sbjct: 334 attatgtcaagctggtgaaggcgctctgtgctgaacacaatgttcaccttgtcactgttc 393 Query: 383 caagtgctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaagg 442 | |||||| ||||| || |||||||| |||||||||||||| ||| | |||||||||| Sbjct: 394 ctgctgctaagactcttggcgagtgggctgggctttgcaagattgactccgagggcaagg 453 Query: 443 caaggaaggttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatccgagg 502 |||||||||||||||||||||| || | |||||||||||||| ||||||||||| |||| Sbjct: 454 caaggaaggttgtaggctgctcctgtgtcgttgtcaaggactacggtgaagaatctgagg 513 Query: 503 gccttaacatcgtgcagcagtatgtcaagtc 533 |||||||||| |||||| ||||||||||||| Sbjct: 514 gccttaacatagtgcaggagtatgtcaagtc 544
>emb|CT833874.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA017I05, full insert sequence Length = 732 Score = 392 bits (198), Expect = e-106 Identities = 327/370 (88%) Strand = Plus / Plus Query: 164 ttcttggtgagccaatggacttgatgactgctctacagcttgtcatgaagaagtcaagtg 223 ||||||| ||||| |||||| ||||||||||||| |||||||| |||||||||||||| | Sbjct: 156 ttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtcaagcg 215 Query: 224 ctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagcatgctg 283 |||||||||| || |||||||||||||||||||| |||||| |||||||||||||||| | Sbjct: 216 ctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcatgccg 275 Query: 284 ctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttgttaagg 343 |||||||||| ||||| |||||||| ||||||||||||||||| || ||| | || |||| Sbjct: 276 ctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtcaagg 335 Query: 344 cactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactctcggag 403 |||| ||||||||||||| ||||||||| ||||| ||||| |||||||||||||| || | Sbjct: 336 cactctgcgctgagcacagtgttcacctcgttaccgtgcctagtgctaaaactcttggcg 395 Query: 404 agtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgct 463 |||||||||||||||||||||| || ||||||||||||| |||||||| |||||||||| Sbjct: 396 agtgggcagggctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgct 455 Query: 464 cttgcattgttgtcaaggactatggtgaagaatccgagggccttaacatcgtgcagcagt 523 | ||| | ||||||||||||| |||||||| || |||||||| ||||| || ||| | | Sbjct: 456 cctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaacatagtccaggact 515 Query: 524 atgtcaagtc 533 |||||||||| Sbjct: 516 atgtcaagtc 525
>gb|BT018309.1| Zea mays clone EL01T0206H08.c mRNA sequence Length = 608 Score = 379 bits (191), Expect = e-101 Identities = 341/391 (87%) Strand = Plus / Plus Query: 143 cagtcgaggcacctaccccgattcttggtgagccaatggacttgatgactgctctacagc 202 |||| ||||| ||||||||| | ||||| ||||| |||||||||||||||||||| |||| Sbjct: 104 cagttgaggcccctaccccggtccttggggagccgatggacttgatgactgctctgcagc 163 Query: 203 ttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgcca 262 |||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 164 ttgtcatgaagaagtcgggtgctcatgatggccttgttaagggtcttcgtgaggctgcca 223 Query: 263 agtccattgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctg 322 | | |||||||||||||||||||||||||| ||||| || ||||| ||||||||||||| Sbjct: 224 aagcaattgagaagcatgctgctcagctttgcgtgcttgcggaggactgtgaccagcctg 283 Query: 323 attacgtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgc 382 |||| || ||||| || ||||| || ||| |||||||||| ||||||||||||||||||| Sbjct: 284 attatgtcaagctggtgaaggctctttgctctgagcacaacgttcacctggttactgtgc 343 Query: 383 caagtgctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaagg 442 | || ||||||||||| || || ||| | |||||||||||||| || |||||||||||| Sbjct: 344 ctagcgctaaaactcttggcgaatggtctgggctttgcaagattgattctgagggcaagg 403 Query: 443 caaggaaggttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatccgagg 502 | ||||||||||| || ||||| || |||| |||||||||||||| |||||||| |||| Sbjct: 404 cgaggaaggttgtgggttgctcctgtgttgtcgtcaaggactatggcgaagaatctgagg 463 Query: 503 gccttaacatcgtgcagcagtatgtcaagtc 533 |||||||||| || ||| |||| |||||||| Sbjct: 464 gccttaacatagttcaggagtacgtcaagtc 494
>gb|BT017581.1| Zea mays clone EL01N0429E05.c mRNA sequence Length = 747 Score = 379 bits (191), Expect = e-101 Identities = 335/383 (87%) Strand = Plus / Plus Query: 148 gaggcacctaccccgattcttggtgagccaatggacttgatgactgctctacagcttgtc 207 ||||||||||||||| ||||||| || || |||||| |||||||||| || ||||| ||| Sbjct: 96 gaggcacctaccccggttcttggggaaccgatggacctgatgactgccctgcagctcgtc 155 Query: 208 atgaagaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtcc 267 |||||||||||| | | | ||||||||||||||||||| || |||||||||||||| || Sbjct: 156 atgaagaagtcagggggtgatgatggccttgtgaagggtcttcgtgaggctgccaaagcc 215 Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 327 || ||||||||||| |||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 216 atcgagaagcatgccgctcagctctgcgtgcttgccgaggactgcgaccagcctgattat 275 Query: 328 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 387 || ||||| || ||||| || ||||||||||||||||| ||||||||||||||||| || Sbjct: 276 gtcaagctggtgaaggctctctgcgctgagcacaatgtccacctggttactgtgcctagc 335 Query: 388 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 447 || |||||||| ||||||||||| |||||||||||||||||| ||||||||||||| ||| Sbjct: 336 gccaaaactcttggagagtgggctgggctttgcaagatcgactctgagggcaaggcgagg 395 Query: 448 aaggttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatccgagggcctt 507 ||||||||||||||||| || |||||||||||||||| || |||||||| || |||||| Sbjct: 396 aaggttgtaggctgctcctgtgttgttgtcaaggactacggcgaagaatctgaaggcctt 455 Query: 508 aacatcgtgcagcagtatgtcaa 530 ||||| |||||| |||| ||||| Sbjct: 456 aacatagtgcaggagtacgtcaa 478
>gb|BT017926.1| Zea mays clone EL01N0519G01.c mRNA sequence Length = 580 Score = 371 bits (187), Expect = 2e-99 Identities = 298/335 (88%) Strand = Plus / Plus Query: 199 cagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggct 258 ||||| || ||||||||||||||||||||||| || ||||||||||| |||||||||||| Sbjct: 10 cagctcgtgatgaagaagtcaagtgctcatgacggacttgtgaagggtctccgtgaggct 69 Query: 259 gccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccag 318 |||||| |||| |||||||| || ||||||||||| ||||| |||||||| ||||||||| Sbjct: 70 gccaaggccatcgagaagcacgccgctcagctttgcgtgcttgctgaggactgtgaccag 129 Query: 319 cctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttact 378 || |||||||| ||||| || |||||||| |||||||||||||||||||||||||| ||| Sbjct: 130 ccagattacgtcaagctggtgaaggcactctgcgctgagcacaatgttcacctggtcact 189 Query: 379 gtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggc 438 || || ||||| ||||| || |||||||| |||||||||||||| ||| |||||||| Sbjct: 190 gttcctgccgctaagactcttggcgagtgggctgggctttgcaagattgactctgagggc 249 Query: 439 aaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatcc 498 |||||||||||||||||||||||||| ||| | || ||||||||||| ||||||||||| Sbjct: 250 aaggcaaggaaggttgtaggctgctcctgcgtcgtcgtcaaggactacggtgaagaatct 309 Query: 499 gagggccttaacatcgtgcagcagtatgtcaagtc 533 |||||||||||||| |||||| ||||||||||||| Sbjct: 310 gagggccttaacatagtgcaggagtatgtcaagtc 344
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 307 bits (155), Expect = 3e-80 Identities = 236/263 (89%) Strand = Plus / Minus Query: 152 cacctaccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatga 211 ||||| ||||| ||||||| ||||| |||||| ||||||||||||| |||||||| |||| Sbjct: 7266270 cacctgccccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatga 7266211 Query: 212 agaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattg 271 |||||||||| ||||||||||| || |||||||||||||||||||| |||||| |||||| Sbjct: 7266210 agaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattg 7266151 Query: 272 agaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtga 331 |||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| || | Sbjct: 7266150 agaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtca 7266091 Query: 332 agcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgcta 391 || | || |||||||| ||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 7266090 agttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgcta 7266031 Query: 392 aaactctcggagagtgggcaggg 414 ||||||| || |||||||||||| Sbjct: 7266030 aaactcttggcgagtgggcaggg 7266008 Score = 280 bits (141), Expect = 7e-72 Identities = 228/257 (88%) Strand = Plus / Plus Query: 158 ccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatgaagaagt 217 ||||| ||||||| ||||| ||||| ||||||||||||| |||||||| |||||||||| Sbjct: 2647142 ccccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagt 2647201 Query: 218 caagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagc 277 |||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 2647202 caagtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagc 2647261 Query: 278 atgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttg 337 |||||||||||||||||||||| |||||||| || ||||| |||||||| || ||| | | Sbjct: 2647262 atgctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttgg 2647321 Query: 338 ttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactc 397 ||||||| || || ||||||||||| |||||||| ||||| ||||| |||||||| |||| Sbjct: 2647322 ttaaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactc 2647381 Query: 398 tcggagagtgggcaggg 414 | || |||||||||||| Sbjct: 2647382 ttggcgagtgggcaggg 2647398 Score = 87.7 bits (44), Expect = 5e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 414 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 473 |||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||| | || Sbjct: 2648042 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 2648101 Query: 474 tgtcaagg 481 |||||||| Sbjct: 2648102 tgtcaagg 2648109 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 414 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 473 |||||||||||| || ||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 7265747 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 7265688 Query: 474 tgtcaagg 481 |||||||| Sbjct: 7265687 tgtcaagg 7265680 Score = 63.9 bits (32), Expect = 8e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 479 aggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaa 530 |||||||||||||||| || |||||||||||||| |||||| | |||||||| Sbjct: 2648197 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaa 2648248
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 307 bits (155), Expect = 3e-80 Identities = 236/263 (89%) Strand = Plus / Minus Query: 152 cacctaccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatga 211 ||||| ||||| ||||||| ||||| |||||| ||||||||||||| |||||||| |||| Sbjct: 106754 cacctgccccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatga 106695 Query: 212 agaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattg 271 |||||||||| ||||||||||| || |||||||||||||||||||| |||||| |||||| Sbjct: 106694 agaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattg 106635 Query: 272 agaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtga 331 |||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| || | Sbjct: 106634 agaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtca 106575 Query: 332 agcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgcta 391 || | || |||||||| ||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 106574 agttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgcta 106515 Query: 392 aaactctcggagagtgggcaggg 414 ||||||| || |||||||||||| Sbjct: 106514 aaactcttggcgagtgggcaggg 106492 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 414 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 473 |||||||||||| || ||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 106231 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 106172 Query: 474 tgtcaagg 481 |||||||| Sbjct: 106171 tgtcaagg 106164
>dbj|AK071026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K20, full insert sequence Length = 2015 Score = 307 bits (155), Expect = 3e-80 Identities = 236/263 (89%) Strand = Plus / Plus Query: 152 cacctaccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatga 211 ||||| ||||| ||||||| ||||| |||||| ||||||||||||| |||||||| |||| Sbjct: 1077 cacctgccccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatga 1136 Query: 212 agaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattg 271 |||||||||| ||||||||||| || |||||||||||||||||||| |||||| |||||| Sbjct: 1137 agaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattg 1196 Query: 272 agaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtga 331 |||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| || | Sbjct: 1197 agaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtca 1256 Query: 332 agcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgcta 391 || | || |||||||| ||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 1257 agttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgcta 1316 Query: 392 aaactctcggagagtgggcaggg 414 ||||||| || |||||||||||| Sbjct: 1317 aaactcttggcgagtgggcaggg 1339 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 414 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 473 |||||||||||| || ||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 474 tgtcaagg 481 |||||||| Sbjct: 1660 tgtcaagg 1667
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 280 bits (141), Expect = 7e-72 Identities = 228/257 (88%) Strand = Plus / Plus Query: 158 ccccgattcttggtgagccaatggacttgatgactgctctacagcttgtcatgaagaagt 217 ||||| ||||||| ||||| ||||| ||||||||||||| |||||||| |||||||||| Sbjct: 72860 ccccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagt 72919 Query: 218 caagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagc 277 |||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 72920 caagtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagc 72979 Query: 278 atgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttg 337 |||||||||||||||||||||| |||||||| || ||||| |||||||| || ||| | | Sbjct: 72980 atgctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttgg 73039 Query: 338 ttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactc 397 ||||||| || || ||||||||||| |||||||| ||||| ||||| |||||||| |||| Sbjct: 73040 ttaaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactc 73099 Query: 398 tcggagagtgggcaggg 414 | || |||||||||||| Sbjct: 73100 ttggcgagtgggcaggg 73116 Score = 87.7 bits (44), Expect = 5e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 414 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 473 |||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||| | || Sbjct: 73760 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 73819 Query: 474 tgtcaagg 481 |||||||| Sbjct: 73820 tgtcaagg 73827 Score = 63.9 bits (32), Expect = 8e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 479 aggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaa 530 |||||||||||||||| || |||||||||||||| |||||| | |||||||| Sbjct: 73915 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaa 73966
>emb|BX819283.1|CNS0A9Q1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZH09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 702 Score = 113 bits (57), Expect = 9e-22 Identities = 162/197 (82%) Strand = Plus / Plus Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 327 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 220 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 279 Query: 328 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 387 |||||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 280 gtgaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 339 Query: 388 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 447 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 340 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 399 Query: 448 aaggttgtaggctgctc 464 |||||||| || ||||| Sbjct: 400 aaggttgttggatgctc 416
>ref|NM_179850.1| Arabidopsis thaliana structural constituent of ribosome (AT2G32060) mRNA, complete cds Length = 694 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 327 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 239 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 298 Query: 328 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 387 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 299 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 358 Query: 388 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 447 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 359 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 418 Query: 448 aaggttgtaggctgctc 464 |||||||| || ||||| Sbjct: 419 aaggttgttggatgctc 435
>ref|NM_128766.4| Arabidopsis thaliana structural constituent of ribosome (AT2G32060) mRNA, complete cds Length = 759 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 327 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 328 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 387 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 388 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 447 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 448 aaggttgtaggctgctc 464 |||||||| || ||||| Sbjct: 457 aaggttgttggatgctc 473
>ref|NM_179849.2| Arabidopsis thaliana structural constituent of ribosome (AT2G32060) mRNA, complete cds Length = 723 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 327 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 328 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 387 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 388 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 447 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 448 aaggttgtaggctgctc 464 |||||||| || ||||| Sbjct: 421 aaggttgttggatgctc 437
>gb|AY133636.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 435 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 327 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 163 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 222 Query: 328 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 387 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 223 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 282 Query: 388 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 447 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 283 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 342 Query: 448 aaggttgtaggctgctc 464 |||||||| || ||||| Sbjct: 343 aaggttgttggatgctc 359
>gb|AY050324.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 696 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 327 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 328 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 387 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 388 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 447 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 448 aaggttgtaggctgctc 464 |||||||| || ||||| Sbjct: 421 aaggttgttggatgctc 437
>gb|AY085161.1| Arabidopsis thaliana clone 13453 mRNA, complete sequence Length = 732 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 327 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 328 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 387 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 388 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 447 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 448 aaggttgtaggctgctc 464 |||||||| || ||||| Sbjct: 457 aaggttgttggatgctc 473
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 77.8 bits (39), Expect = 5e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgatta 326 ||||||||||||||||| ||||||||||| || ||||| ||||||||||| |||||||| Sbjct: 44250 attgagaagcatgctgcacagctttgtgttctagctgaagattgtgaccaacctgatta 44192
>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence Length = 112428 Score = 77.8 bits (39), Expect = 5e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 271 gagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgt 329 |||||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 54496 gagaagcatgctgcacagctctgtgttcttgctgaggattgtgaccaacctgattacgt 54438
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete sequence Length = 103194 Score = 67.9 bits (34), Expect = 5e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 327 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 49702 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 49761 Query: 328 gtgaagcttgttaaggcactatgcgctgagcaca 361 || ||||||||||| || || |||||||| |||| Sbjct: 49762 gtcaagcttgttaaagctctttgcgctgaccaca 49795 Score = 54.0 bits (27), Expect = 7e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 414 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctc 464 |||||||||||| || |||||||||| |||||||||||||| || ||||| Sbjct: 49936 gctttgcaagattgattctgagggcaatgcaaggaaggttgttggatgctc 49986
>gb|AF154659.1| Nicotiana tabacum clone PR50 mRNA sequence Length = 708 Score = 67.9 bits (34), Expect = 5e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 327 ||||||||||||||||| |||||||||||||| || ||||| || |||||||| || || Sbjct: 479 attgagaagcatgctgcgcagctttgtgtgctagcagaggactgcgaccagccagactat 420 Query: 328 gtgaagcttgttaaggcactatgcgctgagcacaatgt 365 || ||||| || || || || || ||||| |||||||| Sbjct: 419 gtcaagctggtcaaagctctttgtgctgatcacaatgt 382
>gb|AC153003.14| Medicago truncatula clone mth2-96o5, complete sequence Length = 93881 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 286 cagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggca 345 ||||||||||| || || || ||||||||||||||||| || || || ||||| ||||| Sbjct: 18473 cagctttgtgttcttgcagaagattgtgaccagcctgactatgttaaacttgtcaaggct 18414 Query: 346 ctatgcgctgagcacaatgtt 366 || || ||||||||||||||| Sbjct: 18413 ctttgtgctgagcacaatgtt 18393
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 50.1 bits (25), Expect = 0.012 Identities = 34/37 (91%) Strand = Plus / Plus Query: 222 tgctcatgatggccttgtgaaggggctccgtgaggct 258 ||||||||||| |||||| ||||| |||||||||||| Sbjct: 8760 tgctcatgatgaccttgtcaagggtctccgtgaggct 8796
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 50.1 bits (25), Expect = 0.012 Identities = 34/37 (91%) Strand = Plus / Plus Query: 222 tgctcatgatggccttgtgaaggggctccgtgaggct 258 ||||||||||| |||||| ||||| |||||||||||| Sbjct: 32365503 tgctcatgatgaccttgtcaagggtctccgtgaggct 32365539
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 50.1 bits (25), Expect = 0.012 Identities = 34/37 (91%) Strand = Plus / Plus Query: 222 tgctcatgatggccttgtgaaggggctccgtgaggct 258 ||||||||||| |||||| ||||| |||||||||||| Sbjct: 126665 tgctcatgatgaccttgtcaagggtctccgtgaggct 126701
>dbj|AB180426.1| Plutella xylostella mRNA for Ribosomal protein S21, complete cds Length = 494 Score = 48.1 bits (24), Expect = 0.046 Identities = 57/68 (83%) Strand = Plus / Plus Query: 397 ctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgta 456 ||||| |||||||| || || ||||||||||||| || |||||||| |||||| |||| Sbjct: 294 ctcggtgagtgggccggtctgtgcaagatcgacaaggacggcaaggctaggaagattgtt 353 Query: 457 ggctgctc 464 || ||||| Sbjct: 354 ggatgctc 361
>ref|NM_101461.3| Arabidopsis thaliana structural constituent of ribosome (AT1G15930) mRNA, complete cds Length = 861 Score = 46.1 bits (23), Expect = 0.18 Identities = 56/67 (83%) Strand = Plus / Plus Query: 418 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 477 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 496 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 555 Query: 478 aaggact 484 ||||||| Sbjct: 556 aaggact 562
>ref|NM_179342.1| Arabidopsis thaliana structural constituent of ribosome (AT1G15930) mRNA, complete cds Length = 758 Score = 46.1 bits (23), Expect = 0.18 Identities = 56/67 (83%) Strand = Plus / Plus Query: 418 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 477 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 393 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 452 Query: 478 aaggact 484 ||||||| Sbjct: 453 aaggact 459
>gb|AY099330.1| Periplaneta americana ribosomal protein S12 mRNA, partial cds Length = 512 Score = 46.1 bits (23), Expect = 0.18 Identities = 50/59 (84%) Strand = Plus / Plus Query: 436 ggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggtgaaga 494 |||||||| ||||| ||||| || ||||| || ||||||| ||||| ||||||||||| Sbjct: 307 ggcaaggctaggaaagttgtcggttgctcctgtgttgttgttaaggattatggtgaaga 365
>gb|AY054130.1| Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 435 Score = 46.1 bits (23), Expect = 0.18 Identities = 56/67 (83%) Strand = Plus / Plus Query: 418 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 477 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 313 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 372 Query: 478 aaggact 484 ||||||| Sbjct: 373 aaggact 379
>gb|AY084613.1| Arabidopsis thaliana clone 11328 mRNA, complete sequence Length = 782 Score = 46.1 bits (23), Expect = 0.18 Identities = 56/67 (83%) Strand = Plus / Plus Query: 418 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 477 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 496 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 555 Query: 478 aaggact 484 ||||||| Sbjct: 556 aaggact 562
>gb|AF380626.1|AF380626 Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 692 Score = 46.1 bits (23), Expect = 0.18 Identities = 56/67 (83%) Strand = Plus / Plus Query: 418 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 477 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 393 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 452 Query: 478 aaggact 484 ||||||| Sbjct: 453 aaggact 459
>emb|BX813855.1|CNS0AEMV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 635 Score = 46.1 bits (23), Expect = 0.18 Identities = 56/67 (83%) Strand = Plus / Plus Query: 418 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 477 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 372 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 431 Query: 478 aaggact 484 ||||||| Sbjct: 432 aaggact 438
>emb|BX815848.1|CNS0ABMM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 46.1 bits (23), Expect = 0.18 Identities = 56/67 (83%) Strand = Plus / Plus Query: 418 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 477 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 369 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 428 Query: 478 aaggact 484 ||||||| Sbjct: 429 aaggact 435
>emb|BX818653.1|CNS0AB7K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 687 Score = 46.1 bits (23), Expect = 0.18 Identities = 56/67 (83%) Strand = Plus / Plus Query: 418 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 477 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 358 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 417 Query: 478 aaggact 484 ||||||| Sbjct: 418 aaggact 424
>ref|XM_988289.1| PREDICTED: Mus musculus protein tyrosine phosphatase, receptor type Z, polypeptide 1, transcript variant 3 (Ptprz1), mRNA Length = 6857 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 ttttggtccttggtttaattat 599 |||||||||||||||||||||| Sbjct: 5110 ttttggtccttggtttaattat 5131
>ref|XM_620293.3| PREDICTED: Mus musculus protein tyrosine phosphatase, receptor type Z, polypeptide 1, transcript variant 1 (Ptprz1), mRNA Length = 7098 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 ttttggtccttggtttaattat 599 |||||||||||||||||||||| Sbjct: 5351 ttttggtccttggtttaattat 5372
>gb|BT012865.1| Lycopersicon esculentum clone 113957F, mRNA sequence Length = 749 Score = 44.1 bits (22), Expect = 0.72 Identities = 43/50 (86%) Strand = Plus / Plus Query: 268 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgacca 317 ||||||||||||||||| || ||||| || |||| ||||| |||||||| Sbjct: 223 attgagaagcatgctgcccaactttgcgttttggcagaggactgtgacca 272
>dbj|AK141126.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230061O04 product:protein tyrosine phosphatase, receptor type Z, polypeptide 1, full insert sequence Length = 3428 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 ttttggtccttggtttaattat 599 |||||||||||||||||||||| Sbjct: 2900 ttttggtccttggtttaattat 2921
>emb|AJ133130.1|MMU133130 Mus musculus mRNA for DSD-1-proteoglycan Length = 6887 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 ttttggtccttggtttaattat 599 |||||||||||||||||||||| Sbjct: 5131 ttttggtccttggtttaattat 5152
>gb|AC133599.3| Mus musculus BAC clone RP24-390N10 from 6, complete sequence Length = 185830 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 ttttggtccttggtttaattat 599 |||||||||||||||||||||| Sbjct: 81993 ttttggtccttggtttaattat 82014
>ref|NM_001044103.1| Bombyx mori ribosomal protein S12 (Rps12), mRNA gb|AY769327.1| Bombyx mori ribosomal protein S12 (RpS12) mRNA, complete cds Length = 534 Score = 42.1 bits (21), Expect = 2.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 400 ggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggc 459 ||||| ||||| || || |||||||| |||| || |||||||||||||| |||| ||| Sbjct: 307 ggagaatgggctggtctctgcaagattgacaaggatggcaaggcaaggaaaattgtcggc 366 Query: 460 tgctc 464 ||||| Sbjct: 367 tgctc 371
>gb|AC108946.4| Mus musculus BAC clone RP23-134N13 from 3, complete sequence Length = 183446 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 578 ttttggtccttggtttaatta 598 ||||||||||||||||||||| Sbjct: 128149 ttttggtccttggtttaatta 128129
>gb|AC107367.13| Mus musculus chromosome 3, clone RP23-331D18, complete sequence Length = 204398 Score = 42.1 bits (21), Expect = 2.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 586 cttggtttaattatgcttttgttct 610 ||||||| ||||||||||||||||| Sbjct: 122257 cttggttaaattatgcttttgttct 122233
>ref|NM_067760.2| Caenorhabditis elegans R05C11.3 (ATPase) mRNA, complete cds Length = 4001 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 476 tcaaggactatggtgaagaat 496 ||||||||||||||||||||| Sbjct: 2673 tcaaggactatggtgaagaat 2693
>gb|AF125446.1| Caenorhabditis elegans cosmid R05C11, complete sequence Length = 45770 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 476 tcaaggactatggtgaagaat 496 ||||||||||||||||||||| Sbjct: 42319 tcaaggactatggtgaagaat 42339
>gb|DQ066262.1| Ixodes scapularis isolate ISN-L-128 ribosomal protein S12 mRNA, complete cds Length = 399 Score = 42.1 bits (21), Expect = 2.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 403 gagtgggcagggctttgcaagatcgacactgagggcaaggc 443 |||||||| || || ||||||||||||| ||||||||||| Sbjct: 256 gagtgggcgggcctgtgcaagatcgacaaagagggcaaggc 296
>gb|AC116337.2| Homo sapiens chromosome 5 clone CTD-2503O16, complete sequence Length = 122363 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 599 tgcttttgttcttgggcttat 619 ||||||||||||||||||||| Sbjct: 59204 tgcttttgttcttgggcttat 59224
>gb|AC121813.3| Mus musculus BAC clone RP23-457E5 from 9, complete sequence Length = 178176 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 372 ggttactgtgccaagtgctaa 392 ||||||||||||||||||||| Sbjct: 102535 ggttactgtgccaagtgctaa 102555
>emb|AJ010708.1|CEL010708 Caenorhabditis elegans mRNA for calcium ATPase, isoform 2 Length = 4023 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 476 tcaaggactatggtgaagaat 496 ||||||||||||||||||||| Sbjct: 2695 tcaaggactatggtgaagaat 2715
>gb|AC021573.10| Homo sapiens chromosome 11, clone RP11-411D10, complete sequence Length = 144656 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 atgtcaagtctcaatagttga 544 ||||||||||||||||||||| Sbjct: 35134 atgtcaagtctcaatagttga 35114 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 133,221,182 Number of extensions: 7297392 Number of successful extensions: 123707 Number of sequences better than 10.0: 63 Number of HSP's gapped: 123704 Number of HSP's successfully gapped: 80 Length of query: 758 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 736 Effective length of database: 18,508,616,841 Effective search space: 13622341994976 Effective search space used: 13622341994976 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
