ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf44k13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY108659.1| Zea mays PCO103032 mRNA sequence 347 3e-92
2gb|DQ245231.1| Zea mays clone 13940 mRNA sequence 339 8e-90
3gb|BT016306.1| Zea mays clone Contig139 mRNA sequence 339 8e-90
4emb|CT830587.1| Oryza sativa (indica cultivar-group) cDNA clone:... 333 5e-88
5emb|CT830586.1| Oryza sativa (indica cultivar-group) cDNA clone:... 333 5e-88
6ref|NM_001062169.1| Oryza sativa (japonica cultivar-group) Os05g... 333 5e-88
7dbj|AK058810.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 5e-88
8gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome... 174 3e-40
9gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome... 174 3e-40
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 174 3e-40
11emb|CT980163.1| partial cDNA sequence from a Lambda ZAP II norma... 54 7e-04
12gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 50 0.011
13gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 48 0.042
14ref|NM_210322.1| Eremothecium gossypii AER108Cp (AER108C), mRNA 48 0.042
15gb|AY110445.1| Zea mays CL5273_1 mRNA sequence 48 0.042
16gb|DQ244672.1| Zea mays clone 9992 mRNA sequence 46 0.16
17ref|NM_001056821.1| Oryza sativa (japonica cultivar-group) Os03g... 46 0.16
18dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
19gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genom... 46 0.16
20dbj|AK119753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.16
21dbj|AK101332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.16
22emb|AJ006766.1|CAR6766 Cicer arietinum mRNA for putative Pi star... 46 0.16
23ref|XM_547914.2| PREDICTED: Canis familiaris similar to Proto-on... 44 0.65
24ref|XM_863079.1| PREDICTED: Canis familiaris similar to Proto-on... 44 0.65
25ref|XM_863075.1| PREDICTED: Canis familiaris similar to Proto-on... 44 0.65
26gb|AY109500.1| Zea mays CL1506_1 mRNA sequence 44 0.65
27gb|AF153448.1|AF153448 Zea mays nitrate reductase (NR1) gene, co... 44 0.65
28gb|M77792.1|MZENADHNR Zea mays nitrate reductase (NAR1S) mRNA, p... 44 0.65
29gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome 42 2.6
30gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete s... 42 2.6
31emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se... 42 2.6
32gb|CP000384.1| Mycobacterium sp. MCS, complete genome 42 2.6
33gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome 42 2.6
34gb|AY398360.1| Danio rerio clone RK140A4H11 heterogeneous nuclea... 42 2.6
35gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 42 2.6
36gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 2.6
37gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 2.6
38ref|NM_200993.1| Danio rerio zgc:55733 (zgc:55733), mRNA >gi|284... 42 2.6
39ref|NM_136168.1| Drosophila melanogaster sickie CG10662-RA (sick... 42 2.6
40dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
41ref|XM_697332.1| PREDICTED: Danio rerio hypothetical protein LOC... 42 2.6
42emb|BX957357.12| Zebrafish DNA sequence from clone DKEY-98L21 in... 42 2.6
43dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
44dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.6
45gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 42 2.6
46gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.6
47emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 2.6
48emb|AL627362.2|CNS07TIX DNA centromeric region sequence from BAC... 42 2.6
49gb|AC009252.9|AC009252 Drosophila melanogaster, chromosome 2L, r... 42 2.6
50emb|BX470267.5| Zebrafish DNA sequence from clone DKEY-98H23, co... 42 2.6
51emb|BX663525.6| Zebrafish DNA sequence from clone DKEY-97A13 in ... 42 2.6
52dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
53gb|AF548005.1| Azoarcus evansii aerobic benzoate degradation gen... 42 2.6
54emb|BX119314.13| Zebrafish DNA sequence from clone DKEY-18H19 in... 42 2.6
55dbj|AK071275.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.6
56emb|AJ224970.1|SSI224970 Spermatozopsis similis mRNA for 90 kD b... 42 2.6
57gb|U59305.1|HSU59305 Human ser-thr protein kinase PK428 mRNA, co... 42 2.6

>gb|AY108659.1| Zea mays PCO103032 mRNA sequence
          Length = 915
 Score =  347 bits (175), Expect = 3e-92
 Identities = 260/287 (90%), Gaps = 6/287 (2%)
 Strand = Plus / Plus

                                                                       
Query: 177 gccatggcggccgagccggag---caggcggcc---gcggcgcaggaggcggccgtgcac 230
           |||||||||||||||||||||   |||||||||   ||||| |||||| |||||||||||
Sbjct: 165 gccatggcggccgagccggagaagcaggcggcccccgcggcacaggagacggccgtgcac 224

                                                                       
Query: 231 atcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccgcaccctc 290
           ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 225 atcgtgtacgttgaccgccccgaggacgccgaccctgaggagttccacatccgcaccctc 284

                                                                       
Query: 291 tcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccactacaagcac 350
            |||||||||||||||||||  |||||||||||||||| |||||||||||||||||| ||
Sbjct: 285 acccccgtcctcggcagcgaacagaaggccagggacgcagtgctctaccactacaagaac 344

                                                                       
Query: 351 gccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaagaagcaa 410
           ||||||||||||||||| |||||||||||| || |||||||| |||| |||||| |||||
Sbjct: 345 gccgccagcggcttctccgcgaagctcaccccccagcaggtcaaggatctcaaggagcaa 404

                                                          
Query: 411 ccaggtgtccttcaggttgtgccgagccagactctccagctccatgg 457
           |||||||| || |||||||||||||||||||||  |||||| |||||
Sbjct: 405 ccaggtgttctccaggttgtgccgagccagacttaccagctacatgg 451



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>gb|DQ245231.1| Zea mays clone 13940 mRNA sequence
          Length = 638

 Score =  339 bits (171), Expect = 8e-90
 Identities = 259/287 (90%), Gaps = 6/287 (2%)
 Strand = Plus / Plus

                                                                       
Query: 177 gccatggcggccgagccggag---caggcggcc---gcggcgcaggaggcggccgtgcac 230
           |||||||||||||||||||||   |||||||||   ||||| |||||| |||||||||||
Sbjct: 51  gccatggcggccgagccggagaagcaggcggcccccgcggcacaggagacggccgtgcac 110

                                                                       
Query: 231 atcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccgcaccctc 290
           ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 111 atcgtgtacgttgaccgccccgaggacgccgaccctgaggagttccacatccgcaccctc 170

                                                                       
Query: 291 tcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccactacaagcac 350
            |||||||||||||||| ||  |||||||||||||||| |||||||||||||||||| ||
Sbjct: 171 acccccgtcctcggcagggaacagaaggccagggacgcagtgctctaccactacaagaac 230

                                                                       
Query: 351 gccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaagaagcaa 410
           ||||||||||||||||| |||||||||||| || |||||||| |||| |||||| |||||
Sbjct: 231 gccgccagcggcttctccgcgaagctcaccccccagcaggtcaaggatctcaaggagcaa 290

                                                          
Query: 411 ccaggtgtccttcaggttgtgccgagccagactctccagctccatgg 457
           |||||||| || |||||||||||||||||||||  |||||| |||||
Sbjct: 291 ccaggtgttctccaggttgtgccgagccagacttaccagctacatgg 337



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>gb|BT016306.1| Zea mays clone Contig139 mRNA sequence
          Length = 1985

 Score =  339 bits (171), Expect = 8e-90
 Identities = 259/287 (90%), Gaps = 6/287 (2%)
 Strand = Plus / Minus

                                                                       
Query: 177 gccatggcggccgagccgga---gcaggcggcc---gcggcgcaggaggcggccgtgcac 230
           ||||||||||||||||||||   ||||||||||   ||||| |||||  |||||||||||
Sbjct: 608 gccatggcggccgagccggaaaagcaggcggcccccgcggcacaggaaacggccgtgcac 549

                                                                       
Query: 231 atcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccgcaccctc 290
           ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 548 atcgtgtacgttgaccgccccgaggacgccgaccctgaggagttccacatccgcaccctc 489

                                                                       
Query: 291 tcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccactacaagcac 350
            |||||||||||||||||||  |||||||||||||||| |||||||||||||||||| ||
Sbjct: 488 acccccgtcctcggcagcgaacagaaggccagggacgcagtgctctaccactacaagaac 429

                                                                       
Query: 351 gccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaagaagcaa 410
           ||||||||||||||||| |||||||||||| || |||||||| |||| |||||| |||||
Sbjct: 428 gccgccagcggcttctccgcgaagctcaccccccagcaggtcaaggatctcaaggagcaa 369

                                                          
Query: 411 ccaggtgtccttcaggttgtgccgagccagactctccagctccatgg 457
           |||||||| || |||||||||||||||||||||  |||||| |||||
Sbjct: 368 ccaggtgttctccaggttgtgccgagccagacttaccagctacatgg 322



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>emb|CT830587.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI032J17, full
           insert sequence
          Length = 652

 Score =  333 bits (168), Expect = 5e-88
 Identities = 265/296 (89%), Gaps = 6/296 (2%)
 Strand = Plus / Plus

                                                                       
Query: 170 ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223
           ||||||||||||| || ||||||   ||||||||||||||   ||||||||||||||| |
Sbjct: 75  ccagatcgccatgtcgaccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 134

                                                                       
Query: 224 cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283
           |||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 135 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 194

                                                                       
Query: 284 caccctctcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccacta 343
           ||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||||
Sbjct: 195 caccctcgcccccgtcctcggcagcgaggagaaggcaaaggaggcggtgctctaccacta 254

                                                                       
Query: 344 caagcacgccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaa 403
           |||||||||||| ||||| |||||||| ||||| ||  || ||||||||||||| |||||
Sbjct: 255 caagcacgccgcaagcggtttctctgcaaagcttactccccagcaggtcgaggagctcaa 314

                                                                   
Query: 404 gaagcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459
           ||||||||||||||| ||||||||||| || ||||||||   ||||||||||||||
Sbjct: 315 gaagcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 370



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>emb|CT830586.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA015M21, full
           insert sequence
          Length = 648

 Score =  333 bits (168), Expect = 5e-88
 Identities = 265/296 (89%), Gaps = 6/296 (2%)
 Strand = Plus / Plus

                                                                       
Query: 170 ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223
           ||||||||||||| || ||||||   ||||||||||||||   ||||||||||||||| |
Sbjct: 70  ccagatcgccatgtcgaccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 129

                                                                       
Query: 224 cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283
           |||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 130 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 189

                                                                       
Query: 284 caccctctcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccacta 343
           ||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||||
Sbjct: 190 caccctcgcccccgtcctcggcagcgaggagaaggcaaaggaggcggtgctctaccacta 249

                                                                       
Query: 344 caagcacgccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaa 403
           |||||||||||| ||||| |||||||| ||||| ||  || ||||||||||||| |||||
Sbjct: 250 caagcacgccgcaagcggtttctctgcaaagcttactccccagcaggtcgaggagctcaa 309

                                                                   
Query: 404 gaagcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459
           ||||||||||||||| ||||||||||| || ||||||||   ||||||||||||||
Sbjct: 310 gaagcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 365



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>ref|NM_001062169.1| Oryza sativa (japonica cultivar-group) Os05g0432700 (Os05g0432700)
           mRNA, complete cds
          Length = 657

 Score =  333 bits (168), Expect = 5e-88
 Identities = 265/296 (89%), Gaps = 6/296 (2%)
 Strand = Plus / Plus

                                                                       
Query: 170 ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223
           ||||||||||||| |||||||||   ||||||||||||||   ||||||||||||||| |
Sbjct: 80  ccagatcgccatgtcggccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 139

                                                                       
Query: 224 cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283
           |||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 140 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 199

                                                                       
Query: 284 caccctctcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccacta 343
           ||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||||
Sbjct: 200 caccctcgcccccgtcctcggcagcgaggagaaggcaaaggaggcggtgctctaccacta 259

                                                                       
Query: 344 caagcacgccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaa 403
           |||||||||||| ||||| |||||||| || || ||  || ||||||||||||| |||||
Sbjct: 260 caagcacgccgcaagcggtttctctgcaaaacttactccccagcaggtcgaggagctcaa 319

                                                                   
Query: 404 gaagcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459
           ||||||||||||||| ||||||||||| || ||||||||   ||||||||||||||
Sbjct: 320 gaagcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 375



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>dbj|AK058810.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-C11, full
           insert sequence
          Length = 657

 Score =  333 bits (168), Expect = 5e-88
 Identities = 265/296 (89%), Gaps = 6/296 (2%)
 Strand = Plus / Plus

                                                                       
Query: 170 ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223
           ||||||||||||| |||||||||   ||||||||||||||   ||||||||||||||| |
Sbjct: 80  ccagatcgccatgtcggccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 139

                                                                       
Query: 224 cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283
           |||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 140 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 199

                                                                       
Query: 284 caccctctcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccacta 343
           ||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||||
Sbjct: 200 caccctcgcccccgtcctcggcagcgaggagaaggcaaaggaggcggtgctctaccacta 259

                                                                       
Query: 344 caagcacgccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaa 403
           |||||||||||| ||||| |||||||| || || ||  || ||||||||||||| |||||
Sbjct: 260 caagcacgccgcaagcggtttctctgcaaaacttactccccagcaggtcgaggagctcaa 319

                                                                   
Query: 404 gaagcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459
           ||||||||||||||| ||||||||||| || ||||||||   ||||||||||||||
Sbjct: 320 gaagcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 375



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>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04,
             complete sequence
          Length = 103458

 Score =  174 bits (88), Expect = 3e-40
 Identities = 131/144 (90%), Gaps = 6/144 (4%)
 Strand = Plus / Minus

                                                                         
Query: 170   ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223
             ||||||||||||| |||||||||   ||||||||||||||   ||||||||||||||| |
Sbjct: 87850 ccagatcgccatgtcggccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 87791

                                                                         
Query: 224   cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283
             |||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 87790 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 87731

                                     
Query: 284   caccctctcccccgtcctcggcag 307
             ||||||| ||||||||||||||||
Sbjct: 87730 caccctcgcccccgtcctcggcag 87707



 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                         
Query: 304   gcagcgaggagaaggccagggacgcggtgctctaccactacaagcacgccgccagcggct 363
             |||||||||||||||| | ||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 87477 gcagcgaggagaaggcaaaggaggcggtgctctaccactacaagcacgccgcaagcggtt 87418

                                                       
Query: 364   tctctgcgaagctcaccgccgagcaggtcgaggacctcaaga 405
             ||||||| || || ||  || ||||||||||||| |||||||
Sbjct: 87417 tctctgcaaaacttactccccagcaggtcgaggagctcaaga 87376



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 406   agcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459
             ||||||||||||| ||||||||||| || ||||||||   ||||||||||||||
Sbjct: 86301 agcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 86248



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>gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1301_G07,
             complete sequence
          Length = 106166

 Score =  174 bits (88), Expect = 3e-40
 Identities = 131/144 (90%), Gaps = 6/144 (4%)
 Strand = Plus / Minus

                                                                         
Query: 170   ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223
             ||||||||||||| |||||||||   ||||||||||||||   ||||||||||||||| |
Sbjct: 51337 ccagatcgccatgtcggccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 51278

                                                                         
Query: 224   cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283
             |||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 51277 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 51218

                                     
Query: 284   caccctctcccccgtcctcggcag 307
             ||||||| ||||||||||||||||
Sbjct: 51217 caccctcgcccccgtcctcggcag 51194



 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                         
Query: 304   gcagcgaggagaaggccagggacgcggtgctctaccactacaagcacgccgccagcggct 363
             |||||||||||||||| | ||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 50964 gcagcgaggagaaggcaaaggaggcggtgctctaccactacaagcacgccgcaagcggtt 50905

                                                       
Query: 364   tctctgcgaagctcaccgccgagcaggtcgaggacctcaaga 405
             ||||||| || || ||  || ||||||||||||| |||||||
Sbjct: 50904 tctctgcaaaacttactccccagcaggtcgaggagctcaaga 50863



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 406   agcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459
             ||||||||||||| ||||||||||| || ||||||||   ||||||||||||||
Sbjct: 49788 agcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 49735



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  174 bits (88), Expect = 3e-40
 Identities = 131/144 (90%), Gaps = 6/144 (4%)
 Strand = Plus / Minus

                                                                            
Query: 170      ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223
                ||||||||||||| |||||||||   ||||||||||||||   ||||||||||||||| |
Sbjct: 21072472 ccagatcgccatgtcggccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 21072413

                                                                            
Query: 224      cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283
                |||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 21072412 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 21072353

                                        
Query: 284      caccctctcccccgtcctcggcag 307
                ||||||| ||||||||||||||||
Sbjct: 21072352 caccctcgcccccgtcctcggcag 21072329



 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                            
Query: 304      gcagcgaggagaaggccagggacgcggtgctctaccactacaagcacgccgccagcggct 363
                |||||||||||||||| | ||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 21072099 gcagcgaggagaaggcaaaggaggcggtgctctaccactacaagcacgccgcaagcggtt 21072040

                                                          
Query: 364      tctctgcgaagctcaccgccgagcaggtcgaggacctcaaga 405
                ||||||| || || ||  || ||||||||||||| |||||||
Sbjct: 21072039 tctctgcaaaacttactccccagcaggtcgaggagctcaaga 21071998



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 406      agcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459
                ||||||||||||| ||||||||||| || ||||||||   ||||||||||||||
Sbjct: 21070923 agcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 21070870



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>emb|CT980163.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 599

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 249 cccgaggacgccgaccccgaggagttccacatccgcaccctctcccccgtcctcggcag 307
           ||||||| || ||| |||||||  |||||| ||||||||||| || |||||||||||||
Sbjct: 232 cccgagggcgacgagcccgaggccttccacctccgcaccctcgccaccgtcctcggcag 290



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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                        
Query: 374     gctcaccgccgagcaggtcgaggac 398
               |||||||||||||||||||||||||
Sbjct: 2086801 gctcaccgccgagcaggtcgaggac 2086777



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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 182    ggcggccgagccggagcaggcggccgcggcgcaggaggcggccg 225
              ||||| |||| ||||||||||||||| |||| || |||||||||
Sbjct: 841157 ggcggtcgagacggagcaggcggccgaggcggagcaggcggccg 841114



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>ref|NM_210322.1| Eremothecium gossypii AER108Cp (AER108C), mRNA
          Length = 801

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 182 ggcggccgagccggagcaggcggccgcggcgcaggaggcggccg 225
           ||||| |||| ||||||||||||||| |||| || |||||||||
Sbjct: 423 ggcggtcgagacggagcaggcggccgaggcggagcaggcggccg 466



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>gb|AY110445.1| Zea mays CL5273_1 mRNA sequence
          Length = 827

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 96/120 (80%)
 Strand = Plus / Minus

                                                                       
Query: 260 cgaccccgaggagttccacatccgcaccctctcccccgtcctcggcagcgaggagaaggc 319
           |||| |||||| || ||||||  ||| |||| || |||| ||||||||||||||||| ||
Sbjct: 646 cgactccgaggcgtaccacatgagcatcctcgccaccgtgctcggcagcgaggagaaagc 587

                                                                       
Query: 320 cagggacgcggtgctctaccactacaagcacgccgccagcggcttctctgcgaagctcac 379
           || |   ||| || |||||  |||||||  |||||||||||| ||| | || ||||||||
Sbjct: 586 caagcgggcgctgatctacagctacaaggccgccgccagcgggttcgccgccaagctcac 527



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>gb|DQ244672.1| Zea mays clone 9992 mRNA sequence
          Length = 619

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 408 caaccaggtgtccttcaggttgtgccgagccagac 442
           |||||||||||  |||| |||||||||||||||||
Sbjct: 382 caaccaggtgtgattcaagttgtgccgagccagac 416



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>ref|NM_001056821.1| Oryza sativa (japonica cultivar-group) Os03g0393700 (Os03g0393700)
           mRNA, complete cds
          Length = 2256

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 130 ctctgctcgccctcctcttcctc 152
           |||||||||||||||||||||||
Sbjct: 66  ctctgctcgccctcctcttcctc 88



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 130      ctctgctcgccctcctcttcctc 152
                |||||||||||||||||||||||
Sbjct: 15661754 ctctgctcgccctcctcttcctc 15661732



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>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete
             sequence
          Length = 178748

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 130   ctctgctcgccctcctcttcctc 152
             |||||||||||||||||||||||
Sbjct: 77174 ctctgctcgccctcctcttcctc 77152



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>dbj|AK119753.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-E02, full
           insert sequence
          Length = 2362

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 130 ctctgctcgccctcctcttcctc 152
           |||||||||||||||||||||||
Sbjct: 66  ctctgctcgccctcctcttcctc 88



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>dbj|AK101332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034H21, full
           insert sequence
          Length = 1555

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 130 ctctgctcgccctcctcttcctc 152
           |||||||||||||||||||||||
Sbjct: 73  ctctgctcgccctcctcttcctc 95



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>emb|AJ006766.1|CAR6766 Cicer arietinum mRNA for putative Pi starvation-induced protein
          Length = 592

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 405 aagcaaccaggtgtccttcaggttgtgccgagccagactctccagctccat 455
           |||||||||||||| ||||| ||||| || |||||||  || |||||||||
Sbjct: 328 aagcaaccaggtgttcttcaagttgttccaagccagaaacttcagctccat 378



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>ref|XM_547914.2| PREDICTED: Canis familiaris similar to Proto-oncogene protein c-fos
           (Cellular oncogene fos) (G0/G1 switch regulatory protein
           7), transcript variant 1 (LOC490792), mRNA
          Length = 2102

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 186 gccgagccggagcaggcggccgcggcgcag 215
           |||||| |||||| ||||||||||||||||
Sbjct: 28  gccgagacggagccggcggccgcggcgcag 57



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>ref|XM_863079.1| PREDICTED: Canis familiaris similar to Proto-oncogene protein c-fos
           (Cellular oncogene fos) (G0/G1 switch regulatory protein
           7), transcript variant 4 (LOC490792), mRNA
          Length = 1904

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 186 gccgagccggagcaggcggccgcggcgcag 215
           |||||| |||||| ||||||||||||||||
Sbjct: 22  gccgagacggagccggcggccgcggcgcag 51



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>ref|XM_863075.1| PREDICTED: Canis familiaris similar to Proto-oncogene protein c-fos
           (Cellular oncogene fos) (G0/G1 switch regulatory protein
           7), transcript variant 3 (LOC490792), mRNA
          Length = 1993

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 186 gccgagccggagcaggcggccgcggcgcag 215
           |||||| |||||| ||||||||||||||||
Sbjct: 27  gccgagacggagccggcggccgcggcgcag 56



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>gb|AY109500.1| Zea mays CL1506_1 mRNA sequence
          Length = 3134

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 380  cgccgagcaggtcgaggacctc 401
            ||||||||||||||||||||||
Sbjct: 1435 cgccgagcaggtcgaggacctc 1414



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>gb|AF153448.1|AF153448 Zea mays nitrate reductase (NR1) gene, complete cds
          Length = 8043

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 380  cgccgagcaggtcgaggacctc 401
            ||||||||||||||||||||||
Sbjct: 6157 cgccgagcaggtcgaggacctc 6136



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>gb|M77792.1|MZENADHNR Zea mays nitrate reductase (NAR1S) mRNA, partial cds
          Length = 1801

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 380 cgccgagcaggtcgaggacctc 401
           ||||||||||||||||||||||
Sbjct: 102 cgccgagcaggtcgaggacctc 81



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>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome
          Length = 5505494

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 204     gccgcggcgcaggaggcggccgtgc 228
               ||||||||||||||||| |||||||
Sbjct: 1577290 gccgcggcgcaggaggccgccgtgc 1577266



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>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence
          Length = 23011544

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 389      ggtcgaggacctcaagaagca 409
                |||||||||||||||||||||
Sbjct: 19955257 ggtcgaggacctcaagaagca 19955277



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>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 183    gcggccgagccggagcaggcg 203
              |||||||||||||||||||||
Sbjct: 324010 gcggccgagccggagcaggcg 324030



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>gb|CP000384.1| Mycobacterium sp. MCS, complete genome
          Length = 5705448

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 374     gctcaccgccgagcaggtcga 394
               |||||||||||||||||||||
Sbjct: 3248448 gctcaccgccgagcaggtcga 3248428



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>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome
          Length = 9139763

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 194     ggagcaggcggccgcggcgcaggag 218
               ||||| |||||||||||||||||||
Sbjct: 5121822 ggagccggcggccgcggcgcaggag 5121798



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>gb|AY398360.1| Danio rerio clone RK140A4H11 heterogeneous nuclear
           ribonucleoprotein (HNRPC) mRNA, complete cds
          Length = 1636

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 132 ctgctcgccctcctcttcctc 152
           |||||||||||||||||||||
Sbjct: 955 ctgctcgccctcctcttcctc 935



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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 201    gcggccgcggcgcaggaggcg 221
              |||||||||||||||||||||
Sbjct: 771878 gcggccgcggcgcaggaggcg 771858



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 374     gctcaccgccgagcaggtcgaggac 398
               |||||||||||||||||| ||||||
Sbjct: 1816817 gctcaccgccgagcaggtggaggac 1816841



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 374     gctcaccgccgagcaggtcgaggac 398
               |||||||||||||||||| ||||||
Sbjct: 3060887 gctcaccgccgagcaggtggaggac 3060911



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>ref|NM_200993.1| Danio rerio zgc:55733 (zgc:55733), mRNA
 gb|BC046891.1| Danio rerio zgc:55733, mRNA (cDNA clone MGC:55733 IMAGE:3816250),
           complete cds
          Length = 2553

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 132 ctgctcgccctcctcttcctc 152
           |||||||||||||||||||||
Sbjct: 954 ctgctcgccctcctcttcctc 934



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>ref|NM_136168.1| Drosophila melanogaster sickie CG10662-RA (sick), mRNA
          Length = 2751

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 389 ggtcgaggacctcaagaagca 409
           |||||||||||||||||||||
Sbjct: 753 ggtcgaggacctcaagaagca 773



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 203      ggccgcggcgcaggaggcggc 223
                |||||||||||||||||||||
Sbjct: 33587109 ggccgcggcgcaggaggcggc 33587089



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>ref|XM_697332.1| PREDICTED: Danio rerio hypothetical protein LOC555031 (LOC555031),
           mRNA
          Length = 1342

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 132 ctgctcgccctcctcttcctc 152
           |||||||||||||||||||||
Sbjct: 51  ctgctcgccctcctcttcctc 31



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>emb|BX957357.12| Zebrafish DNA sequence from clone DKEY-98L21 in linkage group 19,
              complete sequence
          Length = 226454

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 614    aagtgtgtaaatgtaaacgaa 634
              |||||||||||||||||||||
Sbjct: 184628 aagtgtgtaaatgtaaacgaa 184648



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>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0557A01
          Length = 147201

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 203    ggccgcggcgcaggaggcggc 223
              |||||||||||||||||||||
Sbjct: 132306 ggccgcggcgcaggaggcggc 132286



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 183     gcggccgagccggagcaggcggccg 207
               ||||||||||||||| |||||||||
Sbjct: 4063483 gcggccgagccggagaaggcggccg 4063459



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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 72      gcctccagatccacggcgatg 92
               |||||||||||||||||||||
Sbjct: 2744155 gcctccagatccacggcgatg 2744175



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 170    ccagatcgccatggcggccgagccg 194
              |||||||||| ||||||||||||||
Sbjct: 699479 ccagatcgccgtggcggccgagccg 699455



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 191     gccggagcaggcggccgcggcgcag 215
               |||||||||||||||||| ||||||
Sbjct: 4167853 gccggagcaggcggccgccgcgcag 4167829



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 374     gctcaccgccgagcaggtcgaggac 398
               |||||||||||||||||| ||||||
Sbjct: 2790946 gctcaccgccgagcaggtggaggac 2790970



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>emb|AL627362.2|CNS07TIX DNA centromeric region sequence from BAC DP15B03, DP38F06 of chromosome
             5 of Podospora anserina
          Length = 156244

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   ccaaaccccgcgccatcacct 121
             |||||||||||||||||||||
Sbjct: 35069 ccaaaccccgcgccatcacct 35049



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>gb|AC009252.9|AC009252 Drosophila melanogaster, chromosome 2L, region 38A-38A, BAC clone
             BACR22E16, complete sequence
          Length = 164361

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 389   ggtcgaggacctcaagaagca 409
             |||||||||||||||||||||
Sbjct: 41794 ggtcgaggacctcaagaagca 41814



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>emb|BX470267.5| Zebrafish DNA sequence from clone DKEY-98H23, complete sequence
          Length = 182303

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 616  gtgtgtaaatgtaaacgaact 636
            |||||||||||||||||||||
Sbjct: 7152 gtgtgtaaatgtaaacgaact 7172



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>emb|BX663525.6| Zebrafish DNA sequence from clone DKEY-97A13 in linkage group 2,
             complete sequence
          Length = 261927

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 76    ccagatccacggcgatgaagagcacccaa 104
             |||| |||||||||||||||| |||||||
Sbjct: 37061 ccaggtccacggcgatgaagaacacccaa 37033



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>dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0684C02
          Length = 80086

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 203  ggccgcggcgcaggaggcggc 223
            |||||||||||||||||||||
Sbjct: 1981 ggccgcggcgcaggaggcggc 1961



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>gb|AF548005.1| Azoarcus evansii aerobic benzoate degradation gene cluster, complete
             sequence
          Length = 19112

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 389   ggtcgaggacctcaagaagca 409
             |||||||||||||||||||||
Sbjct: 18069 ggtcgaggacctcaagaagca 18089



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>emb|BX119314.13| Zebrafish DNA sequence from clone DKEY-18H19 in linkage group 14,
            complete sequence
          Length = 203157

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 76   ccagatccacggcgatgaagagcacccaa 104
            |||| |||||||||||||||| |||||||
Sbjct: 4067 ccaggtccacggcgatgaagaacacccaa 4039



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>dbj|AK071275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087D20, full
           insert sequence
          Length = 1487

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 203 ggccgcggcgcaggaggcggc 223
           |||||||||||||||||||||
Sbjct: 109 ggccgcggcgcaggaggcggc 89



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>emb|AJ224970.1|SSI224970 Spermatozopsis similis mRNA for 90 kD basal apparatus-protein
          Length = 2767

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  agcaggcggccgcggcgcagg 216
            |||||||||||||||||||||
Sbjct: 1648 agcaggcggccgcggcgcagg 1668



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>gb|U59305.1|HSU59305 Human ser-thr protein kinase PK428 mRNA, complete cds
          Length = 2785

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 199 aggcggccgcggcgcaggagg 219
           |||||||||||||||||||||
Sbjct: 188 aggcggccgcggcgcaggagg 168


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 95,413,958
Number of extensions: 5241291
Number of successful extensions: 174146
Number of sequences better than 10.0: 57
Number of HSP's gapped: 174126
Number of HSP's successfully gapped: 64
Length of query: 686
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 664
Effective length of database: 18,508,616,841
Effective search space: 12289721582424
Effective search space used: 12289721582424
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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