| Clone Name | FLbaf44k13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108659.1| Zea mays PCO103032 mRNA sequence Length = 915 Score = 347 bits (175), Expect = 3e-92 Identities = 260/287 (90%), Gaps = 6/287 (2%) Strand = Plus / Plus Query: 177 gccatggcggccgagccggag---caggcggcc---gcggcgcaggaggcggccgtgcac 230 ||||||||||||||||||||| ||||||||| ||||| |||||| ||||||||||| Sbjct: 165 gccatggcggccgagccggagaagcaggcggcccccgcggcacaggagacggccgtgcac 224 Query: 231 atcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccgcaccctc 290 ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 225 atcgtgtacgttgaccgccccgaggacgccgaccctgaggagttccacatccgcaccctc 284 Query: 291 tcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccactacaagcac 350 ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || Sbjct: 285 acccccgtcctcggcagcgaacagaaggccagggacgcagtgctctaccactacaagaac 344 Query: 351 gccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaagaagcaa 410 ||||||||||||||||| |||||||||||| || |||||||| |||| |||||| ||||| Sbjct: 345 gccgccagcggcttctccgcgaagctcaccccccagcaggtcaaggatctcaaggagcaa 404 Query: 411 ccaggtgtccttcaggttgtgccgagccagactctccagctccatgg 457 |||||||| || ||||||||||||||||||||| |||||| ||||| Sbjct: 405 ccaggtgttctccaggttgtgccgagccagacttaccagctacatgg 451
>gb|DQ245231.1| Zea mays clone 13940 mRNA sequence Length = 638 Score = 339 bits (171), Expect = 8e-90 Identities = 259/287 (90%), Gaps = 6/287 (2%) Strand = Plus / Plus Query: 177 gccatggcggccgagccggag---caggcggcc---gcggcgcaggaggcggccgtgcac 230 ||||||||||||||||||||| ||||||||| ||||| |||||| ||||||||||| Sbjct: 51 gccatggcggccgagccggagaagcaggcggcccccgcggcacaggagacggccgtgcac 110 Query: 231 atcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccgcaccctc 290 ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111 atcgtgtacgttgaccgccccgaggacgccgaccctgaggagttccacatccgcaccctc 170 Query: 291 tcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccactacaagcac 350 |||||||||||||||| || |||||||||||||||| |||||||||||||||||| || Sbjct: 171 acccccgtcctcggcagggaacagaaggccagggacgcagtgctctaccactacaagaac 230 Query: 351 gccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaagaagcaa 410 ||||||||||||||||| |||||||||||| || |||||||| |||| |||||| ||||| Sbjct: 231 gccgccagcggcttctccgcgaagctcaccccccagcaggtcaaggatctcaaggagcaa 290 Query: 411 ccaggtgtccttcaggttgtgccgagccagactctccagctccatgg 457 |||||||| || ||||||||||||||||||||| |||||| ||||| Sbjct: 291 ccaggtgttctccaggttgtgccgagccagacttaccagctacatgg 337
>gb|BT016306.1| Zea mays clone Contig139 mRNA sequence Length = 1985 Score = 339 bits (171), Expect = 8e-90 Identities = 259/287 (90%), Gaps = 6/287 (2%) Strand = Plus / Minus Query: 177 gccatggcggccgagccgga---gcaggcggcc---gcggcgcaggaggcggccgtgcac 230 |||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||| Sbjct: 608 gccatggcggccgagccggaaaagcaggcggcccccgcggcacaggaaacggccgtgcac 549 Query: 231 atcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccgcaccctc 290 ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 548 atcgtgtacgttgaccgccccgaggacgccgaccctgaggagttccacatccgcaccctc 489 Query: 291 tcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccactacaagcac 350 ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || Sbjct: 488 acccccgtcctcggcagcgaacagaaggccagggacgcagtgctctaccactacaagaac 429 Query: 351 gccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaagaagcaa 410 ||||||||||||||||| |||||||||||| || |||||||| |||| |||||| ||||| Sbjct: 428 gccgccagcggcttctccgcgaagctcaccccccagcaggtcaaggatctcaaggagcaa 369 Query: 411 ccaggtgtccttcaggttgtgccgagccagactctccagctccatgg 457 |||||||| || ||||||||||||||||||||| |||||| ||||| Sbjct: 368 ccaggtgttctccaggttgtgccgagccagacttaccagctacatgg 322
>emb|CT830587.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI032J17, full insert sequence Length = 652 Score = 333 bits (168), Expect = 5e-88 Identities = 265/296 (89%), Gaps = 6/296 (2%) Strand = Plus / Plus Query: 170 ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223 ||||||||||||| || |||||| |||||||||||||| ||||||||||||||| | Sbjct: 75 ccagatcgccatgtcgaccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 134 Query: 224 cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283 |||||| ||||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 135 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 194 Query: 284 caccctctcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccacta 343 ||||||| |||||||||||||||||||||||||||| | ||| ||||||||||||||||| Sbjct: 195 caccctcgcccccgtcctcggcagcgaggagaaggcaaaggaggcggtgctctaccacta 254 Query: 344 caagcacgccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaa 403 |||||||||||| ||||| |||||||| ||||| || || ||||||||||||| ||||| Sbjct: 255 caagcacgccgcaagcggtttctctgcaaagcttactccccagcaggtcgaggagctcaa 314 Query: 404 gaagcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459 ||||||||||||||| ||||||||||| || |||||||| |||||||||||||| Sbjct: 315 gaagcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 370
>emb|CT830586.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA015M21, full insert sequence Length = 648 Score = 333 bits (168), Expect = 5e-88 Identities = 265/296 (89%), Gaps = 6/296 (2%) Strand = Plus / Plus Query: 170 ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223 ||||||||||||| || |||||| |||||||||||||| ||||||||||||||| | Sbjct: 70 ccagatcgccatgtcgaccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 129 Query: 224 cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283 |||||| ||||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 130 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 189 Query: 284 caccctctcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccacta 343 ||||||| |||||||||||||||||||||||||||| | ||| ||||||||||||||||| Sbjct: 190 caccctcgcccccgtcctcggcagcgaggagaaggcaaaggaggcggtgctctaccacta 249 Query: 344 caagcacgccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaa 403 |||||||||||| ||||| |||||||| ||||| || || ||||||||||||| ||||| Sbjct: 250 caagcacgccgcaagcggtttctctgcaaagcttactccccagcaggtcgaggagctcaa 309 Query: 404 gaagcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459 ||||||||||||||| ||||||||||| || |||||||| |||||||||||||| Sbjct: 310 gaagcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 365
>ref|NM_001062169.1| Oryza sativa (japonica cultivar-group) Os05g0432700 (Os05g0432700) mRNA, complete cds Length = 657 Score = 333 bits (168), Expect = 5e-88 Identities = 265/296 (89%), Gaps = 6/296 (2%) Strand = Plus / Plus Query: 170 ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223 ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||| | Sbjct: 80 ccagatcgccatgtcggccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 139 Query: 224 cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283 |||||| ||||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 140 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 199 Query: 284 caccctctcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccacta 343 ||||||| |||||||||||||||||||||||||||| | ||| ||||||||||||||||| Sbjct: 200 caccctcgcccccgtcctcggcagcgaggagaaggcaaaggaggcggtgctctaccacta 259 Query: 344 caagcacgccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaa 403 |||||||||||| ||||| |||||||| || || || || ||||||||||||| ||||| Sbjct: 260 caagcacgccgcaagcggtttctctgcaaaacttactccccagcaggtcgaggagctcaa 319 Query: 404 gaagcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459 ||||||||||||||| ||||||||||| || |||||||| |||||||||||||| Sbjct: 320 gaagcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 375
>dbj|AK058810.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-C11, full insert sequence Length = 657 Score = 333 bits (168), Expect = 5e-88 Identities = 265/296 (89%), Gaps = 6/296 (2%) Strand = Plus / Plus Query: 170 ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223 ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||| | Sbjct: 80 ccagatcgccatgtcggccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 139 Query: 224 cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283 |||||| ||||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 140 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 199 Query: 284 caccctctcccccgtcctcggcagcgaggagaaggccagggacgcggtgctctaccacta 343 ||||||| |||||||||||||||||||||||||||| | ||| ||||||||||||||||| Sbjct: 200 caccctcgcccccgtcctcggcagcgaggagaaggcaaaggaggcggtgctctaccacta 259 Query: 344 caagcacgccgccagcggcttctctgcgaagctcaccgccgagcaggtcgaggacctcaa 403 |||||||||||| ||||| |||||||| || || || || ||||||||||||| ||||| Sbjct: 260 caagcacgccgcaagcggtttctctgcaaaacttactccccagcaggtcgaggagctcaa 319 Query: 404 gaagcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459 ||||||||||||||| ||||||||||| || |||||||| |||||||||||||| Sbjct: 320 gaagcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 375
>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04, complete sequence Length = 103458 Score = 174 bits (88), Expect = 3e-40 Identities = 131/144 (90%), Gaps = 6/144 (4%) Strand = Plus / Minus Query: 170 ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223 ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||| | Sbjct: 87850 ccagatcgccatgtcggccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 87791 Query: 224 cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283 |||||| ||||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 87790 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 87731 Query: 284 caccctctcccccgtcctcggcag 307 ||||||| |||||||||||||||| Sbjct: 87730 caccctcgcccccgtcctcggcag 87707 Score = 107 bits (54), Expect = 5e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 304 gcagcgaggagaaggccagggacgcggtgctctaccactacaagcacgccgccagcggct 363 |||||||||||||||| | ||| ||||||||||||||||||||||||||||| ||||| | Sbjct: 87477 gcagcgaggagaaggcaaaggaggcggtgctctaccactacaagcacgccgcaagcggtt 87418 Query: 364 tctctgcgaagctcaccgccgagcaggtcgaggacctcaaga 405 ||||||| || || || || ||||||||||||| ||||||| Sbjct: 87417 tctctgcaaaacttactccccagcaggtcgaggagctcaaga 87376 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 406 agcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459 ||||||||||||| ||||||||||| || |||||||| |||||||||||||| Sbjct: 86301 agcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 86248
>gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1301_G07, complete sequence Length = 106166 Score = 174 bits (88), Expect = 3e-40 Identities = 131/144 (90%), Gaps = 6/144 (4%) Strand = Plus / Minus Query: 170 ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223 ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||| | Sbjct: 51337 ccagatcgccatgtcggccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 51278 Query: 224 cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283 |||||| ||||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 51277 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 51218 Query: 284 caccctctcccccgtcctcggcag 307 ||||||| |||||||||||||||| Sbjct: 51217 caccctcgcccccgtcctcggcag 51194 Score = 107 bits (54), Expect = 5e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 304 gcagcgaggagaaggccagggacgcggtgctctaccactacaagcacgccgccagcggct 363 |||||||||||||||| | ||| ||||||||||||||||||||||||||||| ||||| | Sbjct: 50964 gcagcgaggagaaggcaaaggaggcggtgctctaccactacaagcacgccgcaagcggtt 50905 Query: 364 tctctgcgaagctcaccgccgagcaggtcgaggacctcaaga 405 ||||||| || || || || ||||||||||||| ||||||| Sbjct: 50904 tctctgcaaaacttactccccagcaggtcgaggagctcaaga 50863 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 406 agcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459 ||||||||||||| ||||||||||| || |||||||| |||||||||||||| Sbjct: 49788 agcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 49735
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 174 bits (88), Expect = 3e-40 Identities = 131/144 (90%), Gaps = 6/144 (4%) Strand = Plus / Minus Query: 170 ccagatcgccatggcggccgagc---cggagcaggcggcc---gcggcgcaggaggcggc 223 ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||| | Sbjct: 21072472 ccagatcgccatgtcggccgagcagccggagcaggcggcccccgcggcgcaggaggcgac 21072413 Query: 224 cgtgcacatcgtctacgtcgaccgccccgaggacgccgaccccgaggagttccacatccg 283 |||||| ||||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 21072412 cgtgcagatcgtctacctggaccgccccgcggacgccgaccccgaggagttccacatccg 21072353 Query: 284 caccctctcccccgtcctcggcag 307 ||||||| |||||||||||||||| Sbjct: 21072352 caccctcgcccccgtcctcggcag 21072329 Score = 107 bits (54), Expect = 5e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 304 gcagcgaggagaaggccagggacgcggtgctctaccactacaagcacgccgccagcggct 363 |||||||||||||||| | ||| ||||||||||||||||||||||||||||| ||||| | Sbjct: 21072099 gcagcgaggagaaggcaaaggaggcggtgctctaccactacaagcacgccgcaagcggtt 21072040 Query: 364 tctctgcgaagctcaccgccgagcaggtcgaggacctcaaga 405 ||||||| || || || || ||||||||||||| ||||||| Sbjct: 21072039 tctctgcaaaacttactccccagcaggtcgaggagctcaaga 21071998 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 406 agcaaccaggtgtccttcaggttgtgccgagccagactctccagctccatggac 459 ||||||||||||| ||||||||||| || |||||||| |||||||||||||| Sbjct: 21070923 agcaaccaggtgttcttcaggttgtaccaagccagacataccagctccatggac 21070870
>emb|CT980163.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 599 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 249 cccgaggacgccgaccccgaggagttccacatccgcaccctctcccccgtcctcggcag 307 ||||||| || ||| ||||||| |||||| ||||||||||| || ||||||||||||| Sbjct: 232 cccgagggcgacgagcccgaggccttccacctccgcaccctcgccaccgtcctcggcag 290
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 50.1 bits (25), Expect = 0.011 Identities = 25/25 (100%) Strand = Plus / Minus Query: 374 gctcaccgccgagcaggtcgaggac 398 ||||||||||||||||||||||||| Sbjct: 2086801 gctcaccgccgagcaggtcgaggac 2086777
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 48.1 bits (24), Expect = 0.042 Identities = 39/44 (88%) Strand = Plus / Minus Query: 182 ggcggccgagccggagcaggcggccgcggcgcaggaggcggccg 225 ||||| |||| ||||||||||||||| |||| || ||||||||| Sbjct: 841157 ggcggtcgagacggagcaggcggccgaggcggagcaggcggccg 841114
>ref|NM_210322.1| Eremothecium gossypii AER108Cp (AER108C), mRNA Length = 801 Score = 48.1 bits (24), Expect = 0.042 Identities = 39/44 (88%) Strand = Plus / Plus Query: 182 ggcggccgagccggagcaggcggccgcggcgcaggaggcggccg 225 ||||| |||| ||||||||||||||| |||| || ||||||||| Sbjct: 423 ggcggtcgagacggagcaggcggccgaggcggagcaggcggccg 466
>gb|AY110445.1| Zea mays CL5273_1 mRNA sequence Length = 827 Score = 48.1 bits (24), Expect = 0.042 Identities = 96/120 (80%) Strand = Plus / Minus Query: 260 cgaccccgaggagttccacatccgcaccctctcccccgtcctcggcagcgaggagaaggc 319 |||| |||||| || |||||| ||| |||| || |||| ||||||||||||||||| || Sbjct: 646 cgactccgaggcgtaccacatgagcatcctcgccaccgtgctcggcagcgaggagaaagc 587 Query: 320 cagggacgcggtgctctaccactacaagcacgccgccagcggcttctctgcgaagctcac 379 || | ||| || ||||| ||||||| |||||||||||| ||| | || |||||||| Sbjct: 586 caagcgggcgctgatctacagctacaaggccgccgccagcgggttcgccgccaagctcac 527
>gb|DQ244672.1| Zea mays clone 9992 mRNA sequence Length = 619 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 408 caaccaggtgtccttcaggttgtgccgagccagac 442 ||||||||||| |||| ||||||||||||||||| Sbjct: 382 caaccaggtgtgattcaagttgtgccgagccagac 416
>ref|NM_001056821.1| Oryza sativa (japonica cultivar-group) Os03g0393700 (Os03g0393700) mRNA, complete cds Length = 2256 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 130 ctctgctcgccctcctcttcctc 152 ||||||||||||||||||||||| Sbjct: 66 ctctgctcgccctcctcttcctc 88
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 130 ctctgctcgccctcctcttcctc 152 ||||||||||||||||||||||| Sbjct: 15661754 ctctgctcgccctcctcttcctc 15661732
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete sequence Length = 178748 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 130 ctctgctcgccctcctcttcctc 152 ||||||||||||||||||||||| Sbjct: 77174 ctctgctcgccctcctcttcctc 77152
>dbj|AK119753.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-E02, full insert sequence Length = 2362 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 130 ctctgctcgccctcctcttcctc 152 ||||||||||||||||||||||| Sbjct: 66 ctctgctcgccctcctcttcctc 88
>dbj|AK101332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034H21, full insert sequence Length = 1555 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 130 ctctgctcgccctcctcttcctc 152 ||||||||||||||||||||||| Sbjct: 73 ctctgctcgccctcctcttcctc 95
>emb|AJ006766.1|CAR6766 Cicer arietinum mRNA for putative Pi starvation-induced protein Length = 592 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Plus Query: 405 aagcaaccaggtgtccttcaggttgtgccgagccagactctccagctccat 455 |||||||||||||| ||||| ||||| || ||||||| || ||||||||| Sbjct: 328 aagcaaccaggtgttcttcaagttgttccaagccagaaacttcagctccat 378
>ref|XM_547914.2| PREDICTED: Canis familiaris similar to Proto-oncogene protein c-fos (Cellular oncogene fos) (G0/G1 switch regulatory protein 7), transcript variant 1 (LOC490792), mRNA Length = 2102 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 186 gccgagccggagcaggcggccgcggcgcag 215 |||||| |||||| |||||||||||||||| Sbjct: 28 gccgagacggagccggcggccgcggcgcag 57
>ref|XM_863079.1| PREDICTED: Canis familiaris similar to Proto-oncogene protein c-fos (Cellular oncogene fos) (G0/G1 switch regulatory protein 7), transcript variant 4 (LOC490792), mRNA Length = 1904 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 186 gccgagccggagcaggcggccgcggcgcag 215 |||||| |||||| |||||||||||||||| Sbjct: 22 gccgagacggagccggcggccgcggcgcag 51
>ref|XM_863075.1| PREDICTED: Canis familiaris similar to Proto-oncogene protein c-fos (Cellular oncogene fos) (G0/G1 switch regulatory protein 7), transcript variant 3 (LOC490792), mRNA Length = 1993 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 186 gccgagccggagcaggcggccgcggcgcag 215 |||||| |||||| |||||||||||||||| Sbjct: 27 gccgagacggagccggcggccgcggcgcag 56
>gb|AY109500.1| Zea mays CL1506_1 mRNA sequence Length = 3134 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 380 cgccgagcaggtcgaggacctc 401 |||||||||||||||||||||| Sbjct: 1435 cgccgagcaggtcgaggacctc 1414
>gb|AF153448.1|AF153448 Zea mays nitrate reductase (NR1) gene, complete cds Length = 8043 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 380 cgccgagcaggtcgaggacctc 401 |||||||||||||||||||||| Sbjct: 6157 cgccgagcaggtcgaggacctc 6136
>gb|M77792.1|MZENADHNR Zea mays nitrate reductase (NAR1S) mRNA, partial cds Length = 1801 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 380 cgccgagcaggtcgaggacctc 401 |||||||||||||||||||||| Sbjct: 102 cgccgagcaggtcgaggacctc 81
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 gccgcggcgcaggaggcggccgtgc 228 ||||||||||||||||| ||||||| Sbjct: 1577290 gccgcggcgcaggaggccgccgtgc 1577266
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 ggtcgaggacctcaagaagca 409 ||||||||||||||||||||| Sbjct: 19955257 ggtcgaggacctcaagaagca 19955277
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 gcggccgagccggagcaggcg 203 ||||||||||||||||||||| Sbjct: 324010 gcggccgagccggagcaggcg 324030
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 gctcaccgccgagcaggtcga 394 ||||||||||||||||||||| Sbjct: 3248448 gctcaccgccgagcaggtcga 3248428
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 ggagcaggcggccgcggcgcaggag 218 ||||| ||||||||||||||||||| Sbjct: 5121822 ggagccggcggccgcggcgcaggag 5121798
>gb|AY398360.1| Danio rerio clone RK140A4H11 heterogeneous nuclear ribonucleoprotein (HNRPC) mRNA, complete cds Length = 1636 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ctgctcgccctcctcttcctc 152 ||||||||||||||||||||| Sbjct: 955 ctgctcgccctcctcttcctc 935
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 gcggccgcggcgcaggaggcg 221 ||||||||||||||||||||| Sbjct: 771878 gcggccgcggcgcaggaggcg 771858
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 gctcaccgccgagcaggtcgaggac 398 |||||||||||||||||| |||||| Sbjct: 1816817 gctcaccgccgagcaggtggaggac 1816841
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 gctcaccgccgagcaggtcgaggac 398 |||||||||||||||||| |||||| Sbjct: 3060887 gctcaccgccgagcaggtggaggac 3060911
>ref|NM_200993.1| Danio rerio zgc:55733 (zgc:55733), mRNA gb|BC046891.1| Danio rerio zgc:55733, mRNA (cDNA clone MGC:55733 IMAGE:3816250), complete cds Length = 2553 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ctgctcgccctcctcttcctc 152 ||||||||||||||||||||| Sbjct: 954 ctgctcgccctcctcttcctc 934
>ref|NM_136168.1| Drosophila melanogaster sickie CG10662-RA (sick), mRNA Length = 2751 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 ggtcgaggacctcaagaagca 409 ||||||||||||||||||||| Sbjct: 753 ggtcgaggacctcaagaagca 773
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 ggccgcggcgcaggaggcggc 223 ||||||||||||||||||||| Sbjct: 33587109 ggccgcggcgcaggaggcggc 33587089
>ref|XM_697332.1| PREDICTED: Danio rerio hypothetical protein LOC555031 (LOC555031), mRNA Length = 1342 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ctgctcgccctcctcttcctc 152 ||||||||||||||||||||| Sbjct: 51 ctgctcgccctcctcttcctc 31
>emb|BX957357.12| Zebrafish DNA sequence from clone DKEY-98L21 in linkage group 19, complete sequence Length = 226454 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 614 aagtgtgtaaatgtaaacgaa 634 ||||||||||||||||||||| Sbjct: 184628 aagtgtgtaaatgtaaacgaa 184648
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 ggccgcggcgcaggaggcggc 223 ||||||||||||||||||||| Sbjct: 132306 ggccgcggcgcaggaggcggc 132286
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 gcggccgagccggagcaggcggccg 207 ||||||||||||||| ||||||||| Sbjct: 4063483 gcggccgagccggagaaggcggccg 4063459
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 gcctccagatccacggcgatg 92 ||||||||||||||||||||| Sbjct: 2744155 gcctccagatccacggcgatg 2744175
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 ccagatcgccatggcggccgagccg 194 |||||||||| |||||||||||||| Sbjct: 699479 ccagatcgccgtggcggccgagccg 699455 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 gccggagcaggcggccgcggcgcag 215 |||||||||||||||||| |||||| Sbjct: 4167853 gccggagcaggcggccgccgcgcag 4167829
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 gctcaccgccgagcaggtcgaggac 398 |||||||||||||||||| |||||| Sbjct: 2790946 gctcaccgccgagcaggtggaggac 2790970
>emb|AL627362.2|CNS07TIX DNA centromeric region sequence from BAC DP15B03, DP38F06 of chromosome 5 of Podospora anserina Length = 156244 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 ccaaaccccgcgccatcacct 121 ||||||||||||||||||||| Sbjct: 35069 ccaaaccccgcgccatcacct 35049
>gb|AC009252.9|AC009252 Drosophila melanogaster, chromosome 2L, region 38A-38A, BAC clone BACR22E16, complete sequence Length = 164361 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 ggtcgaggacctcaagaagca 409 ||||||||||||||||||||| Sbjct: 41794 ggtcgaggacctcaagaagca 41814
>emb|BX470267.5| Zebrafish DNA sequence from clone DKEY-98H23, complete sequence Length = 182303 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 616 gtgtgtaaatgtaaacgaact 636 ||||||||||||||||||||| Sbjct: 7152 gtgtgtaaatgtaaacgaact 7172
>emb|BX663525.6| Zebrafish DNA sequence from clone DKEY-97A13 in linkage group 2, complete sequence Length = 261927 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 76 ccagatccacggcgatgaagagcacccaa 104 |||| |||||||||||||||| ||||||| Sbjct: 37061 ccaggtccacggcgatgaagaacacccaa 37033
>dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C02 Length = 80086 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 ggccgcggcgcaggaggcggc 223 ||||||||||||||||||||| Sbjct: 1981 ggccgcggcgcaggaggcggc 1961
>gb|AF548005.1| Azoarcus evansii aerobic benzoate degradation gene cluster, complete sequence Length = 19112 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 ggtcgaggacctcaagaagca 409 ||||||||||||||||||||| Sbjct: 18069 ggtcgaggacctcaagaagca 18089
>emb|BX119314.13| Zebrafish DNA sequence from clone DKEY-18H19 in linkage group 14, complete sequence Length = 203157 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 76 ccagatccacggcgatgaagagcacccaa 104 |||| |||||||||||||||| ||||||| Sbjct: 4067 ccaggtccacggcgatgaagaacacccaa 4039
>dbj|AK071275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087D20, full insert sequence Length = 1487 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 ggccgcggcgcaggaggcggc 223 ||||||||||||||||||||| Sbjct: 109 ggccgcggcgcaggaggcggc 89
>emb|AJ224970.1|SSI224970 Spermatozopsis similis mRNA for 90 kD basal apparatus-protein Length = 2767 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 agcaggcggccgcggcgcagg 216 ||||||||||||||||||||| Sbjct: 1648 agcaggcggccgcggcgcagg 1668
>gb|U59305.1|HSU59305 Human ser-thr protein kinase PK428 mRNA, complete cds Length = 2785 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aggcggccgcggcgcaggagg 219 ||||||||||||||||||||| Sbjct: 188 aggcggccgcggcgcaggagg 168 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 95,413,958 Number of extensions: 5241291 Number of successful extensions: 174146 Number of sequences better than 10.0: 57 Number of HSP's gapped: 174126 Number of HSP's successfully gapped: 64 Length of query: 686 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 664 Effective length of database: 18,508,616,841 Effective search space: 12289721582424 Effective search space used: 12289721582424 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)