>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBb0004A05, complete sequence
          Length = 157913
 Score =  117 bits (59), Expect = 8e-23
 Identities = 128/151 (84%)
 Strand = Plus / Minus

                                                                          
Query: 662    ggagccttcaacaacaaaatgtggccatatcttctgcaccgagtgcatcaagcaagccat 721
              |||||| || |||||||  || |||||||||||||||||    |||||||||||||||||
Sbjct: 142721 ggagccctccacaacaatttgcggccatatcttctgcacgacatgcatcaagcaagccat 142662

                                                                          
Query: 722    ccagtttcagaagaaatgccctacctgccgcaaggccctgaggaagaacaacttccatcg 781
              |||| ||||||||||||||||||| ||| | |||   ||||||  |||||| ||||| ||
Sbjct: 142661 ccagattcagaagaaatgccctacttgcagaaagagtctgagggcgaacaatttccaccg 142602

                                             
Query: 782    tatttaccttccgaactcggatggttaaggt 812
              |||||||||||| ||||| ||| ||||||||
Sbjct: 142601 tatttaccttccaaactctgatagttaaggt 142571



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 59/68 (86%), Gaps = 3/68 (4%)
 Strand = Plus / Minus

                                                                          
Query: 496    ggaacaaacgccaaagggttgcccctttgata---tgtctctccccagaaaggggagaag 552
              |||||||||| ||||||||||| ||| | |||   || ||||| ||||||||||||||||
Sbjct: 144000 ggaacaaacgtcaaagggttgcacctgttatacactgcctctctccagaaaggggagaag 143941

                      
Query: 553    ggtccagc 560
              ||||||||
Sbjct: 143940 ggtccagc 143933



 Score = 50.1 bits (25), Expect = 0.016
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 276    attgatgtggaagctcttgatgatgaggtgcag 308
              ||||||||||||||||| |||||||| ||||||
Sbjct: 144585 attgatgtggaagctctggatgatgaagtgcag 144553

>emb|CT831906.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107E03, full
           insert sequence
          Length = 1183

 Score =  115 bits (58), Expect = 3e-22
 Identities = 127/150 (84%)
 Strand = Plus / Plus

                                                                       
Query: 662 ggagccttcaacaacaaaatgtggccatatcttctgcaccgagtgcatcaagcaagccat 721
           |||||| || |||||||  || |||||||||||||||||    |||||||||||||||||
Sbjct: 614 ggagccctccacaacaatttgcggccatatcttctgcacgacatgcatcaagcaagccat 673

                                                                       
Query: 722 ccagtttcagaagaaatgccctacctgccgcaaggccctgaggaagaacaacttccatcg 781
           |||| ||||||||||||||||||| ||| | |||   ||||||  |||||| ||||| ||
Sbjct: 674 ccagattcagaagaaatgccctacttgcagaaagagtctgagggcgaacaatttccaccg 733

                                         
Query: 782 tatttaccttccgaactcggatggttaagg 811
           |||||||||||| ||||| ||| |||||||
Sbjct: 734 tatttaccttccaaactctgatagttaagg 763



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 59/68 (86%), Gaps = 3/68 (4%)
 Strand = Plus / Plus

                                                                       
Query: 496 ggaacaaacgccaaagggttgcccctttgata---tgtctctccccagaaaggggagaag 552
           |||||||||| ||||||||||| ||| | |||   || ||||| ||||||||||||||||
Sbjct: 472 ggaacaaacgtcaaagggttgcacctgttatacactgcctctctccagaaaggggagaag 531

                   
Query: 553 ggtccagc 560
           ||||||||
Sbjct: 532 ggtccagc 539



 Score = 50.1 bits (25), Expect = 0.016
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 276 attgatgtggaagctcttgatgatgaggtgcag 308
           ||||||||||||||||| |||||||| ||||||
Sbjct: 339 attgatgtggaagctctggatgatgaagtgcag 371

>dbj|AK104052.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-C12, full
           insert sequence
          Length = 969

 Score =  115 bits (58), Expect = 3e-22
 Identities = 127/150 (84%)
 Strand = Plus / Plus

                                                                       
Query: 662 ggagccttcaacaacaaaatgtggccatatcttctgcaccgagtgcatcaagcaagccat 721
           |||||| || |||||||  || |||||||||||||||||    |||||||||||||||||
Sbjct: 435 ggagccctccacaacaatttgcggccatatcttctgcacgacatgcatcaagcaagccat 494

                                                                       
Query: 722 ccagtttcagaagaaatgccctacctgccgcaaggccctgaggaagaacaacttccatcg 781
           |||| ||||||||||||||||||| ||| | |||   ||||||  |||||| ||||| ||
Sbjct: 495 ccagattcagaagaaatgccctacttgcagaaagagtctgagggcgaacaatttccaccg 554

                                         
Query: 782 tatttaccttccgaactcggatggttaagg 811
           |||||||||||| ||||| ||| |||||||
Sbjct: 555 tatttaccttccaaactctgatagttaagg 584



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 59/68 (86%), Gaps = 3/68 (4%)
 Strand = Plus / Plus

                                                                       
Query: 496 ggaacaaacgccaaagggttgcccctttgata---tgtctctccccagaaaggggagaag 552
           |||||||||| ||||||||||| ||| | |||   || ||||| ||||||||||||||||
Sbjct: 293 ggaacaaacgtcaaagggttgcacctgttatacactgcctctctccagaaaggggagaag 352

                   
Query: 553 ggtccagc 560
           ||||||||
Sbjct: 353 ggtccagc 360



 Score = 50.1 bits (25), Expect = 0.016
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 276 attgatgtggaagctcttgatgatgaggtgcag 308
           ||||||||||||||||| |||||||| ||||||
Sbjct: 160 attgatgtggaagctctggatgatgaagtgcag 192

>dbj|AK073887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075P09, full
           insert sequence
          Length = 1146

 Score =  115 bits (58), Expect = 3e-22
 Identities = 127/150 (84%)
 Strand = Plus / Plus

                                                                       
Query: 662 ggagccttcaacaacaaaatgtggccatatcttctgcaccgagtgcatcaagcaagccat 721
           |||||| || |||||||  || |||||||||||||||||    |||||||||||||||||
Sbjct: 612 ggagccctccacaacaatttgcggccatatcttctgcacgacatgcatcaagcaagccat 671

                                                                       
Query: 722 ccagtttcagaagaaatgccctacctgccgcaaggccctgaggaagaacaacttccatcg 781
           |||| ||||||||||||||||||| ||| | |||   ||||||  |||||| ||||| ||
Sbjct: 672 ccagattcagaagaaatgccctacttgcagaaagagtctgagggcgaacaatttccaccg 731

                                         
Query: 782 tatttaccttccgaactcggatggttaagg 811
           |||||||||||| ||||| ||| |||||||
Sbjct: 732 tatttaccttccaaactctgatagttaagg 761



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 59/68 (86%), Gaps = 3/68 (4%)
 Strand = Plus / Plus

                                                                       
Query: 496 ggaacaaacgccaaagggttgcccctttgata---tgtctctccccagaaaggggagaag 552
           |||||||||| ||||||||||| ||| | |||   || ||||| ||||||||||||||||
Sbjct: 470 ggaacaaacgtcaaagggttgcacctgttatacactgcctctctccagaaaggggagaag 529

                   
Query: 553 ggtccagc 560
           ||||||||
Sbjct: 530 ggtccagc 537



 Score = 50.1 bits (25), Expect = 0.016
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 276 attgatgtggaagctcttgatgatgaggtgcag 308
           ||||||||||||||||| |||||||| ||||||
Sbjct: 337 attgatgtggaagctctggatgatgaagtgcag 369

>gb|AY109611.1| Zea mays CL37807_1 mRNA sequence
          Length = 1261

 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 681 tgtggccatatcttctgcaccgagtgcatcaagcaagccatccagtttcagaagaaatgc 740
           ||||||||| ||||||||  |  |||||||||||| |||||| || ||||||||||||||
Sbjct: 507 tgtggccatgtcttctgcgacacgtgcatcaagcaggccatcaaggttcagaagaaatgc 448

                
Query: 741 cctac 745
           |||||
Sbjct: 447 cctac 443

>ref|NM_001070131.1| Oryza sativa (japonica cultivar-group) Os09g0504700 (Os09g0504700)
           mRNA, complete cds
          Length = 474

 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 59/68 (86%), Gaps = 3/68 (4%)
 Strand = Plus / Plus

                                                                       
Query: 496 ggaacaaacgccaaagggttgcccctttgata---tgtctctccccagaaaggggagaag 552
           |||||||||| ||||||||||| ||| | |||   || ||||| ||||||||||||||||
Sbjct: 287 ggaacaaacgtcaaagggttgcacctgttatacactgcctctctccagaaaggggagaag 346

                   
Query: 553 ggtccagc 560
           ||||||||
Sbjct: 347 ggtccagc 354



 Score = 50.1 bits (25), Expect = 0.016
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 276 attgatgtggaagctcttgatgatgaggtgcag 308
           ||||||||||||||||| |||||||| ||||||
Sbjct: 154 attgatgtggaagctctggatgatgaagtgcag 186

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 59/68 (86%), Gaps = 3/68 (4%)
 Strand = Plus / Minus

                                                                            
Query: 496      ggaacaaacgccaaagggttgcccctttgata---tgtctctccccagaaaggggagaag 552
                |||||||||| ||||||||||| ||| | |||   || ||||| ||||||||||||||||
Sbjct: 19210350 ggaacaaacgtcaaagggttgcacctgttatacactgcctctctccagaaaggggagaag 19210291

                        
Query: 553      ggtccagc 560
                ||||||||
Sbjct: 19210290 ggtccagc 19210283



 Score = 50.1 bits (25), Expect = 0.016
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 276      attgatgtggaagctcttgatgatgaggtgcag 308
                ||||||||||||||||| |||||||| ||||||
Sbjct: 19210935 attgatgtggaagctctggatgatgaagtgcag 19210903

>gb|BC075350.1| Xenopus tropicalis cDNA clone IMAGE:7005231
          Length = 1089

 Score = 46.1 bits (23), Expect = 0.25
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 673 caacaaaatgtggccatatcttctgca 699
           |||| ||||||||||||||||||||||
Sbjct: 627 caaccaaatgtggccatatcttctgca 653

>ref|NM_001016554.2| Xenopus tropicalis ring finger protein 4 (rnf4), mRNA
 emb|CR760712.2| Xenopus tropicalis finished cDNA, clone TEgg003e24
          Length = 1063

 Score = 46.1 bits (23), Expect = 0.25
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 673 caacaaaatgtggccatatcttctgca 699
           |||| ||||||||||||||||||||||
Sbjct: 601 caaccaaatgtggccatatcttctgca 627

>gb|BC087310.1| Xenopus laevis hypothetical LOC495944, mRNA (cDNA clone MGC:99054
           IMAGE:7203249), complete cds
          Length = 930

 Score = 46.1 bits (23), Expect = 0.25
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 673 caacaaaatgtggccatatcttctgca 699
           |||| ||||||||||||||||||||||
Sbjct: 503 caaccaaatgtggccatatcttctgca 529

>emb|CR352285.4| Zebrafish DNA sequence from clone CH211-210K13 in linkage group 11,
              complete sequence
          Length = 133334

 Score = 44.1 bits (22), Expect = 0.98
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 986    ctttatcatctgtgtgttcttc 1007
              ||||||||||||||||||||||
Sbjct: 106670 ctttatcatctgtgtgttcttc 106691

>ref|XR_021194.1| PREDICTED: Pan troglodytes hypothetical protein LOC740182
           (LOC740182), mRNA
          Length = 798

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 760 tgaggaagaacaacttccatc 780
           |||||||||||||||||||||
Sbjct: 624 tgaggaagaacaacttccatc 604

>emb|CR855325.16| Zebrafish DNA sequence from clone DKEY-48K8 in linkage group 5,
             complete sequence
          Length = 198448

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 372   acaccattttctctggatgaagatg 396
             |||||||||||||||||||| ||||
Sbjct: 87823 acaccattttctctggatgaggatg 87799

>gb|AC163657.3| Mus musculus BAC clone RP24-302A24 from chromosome 1, complete sequence
          Length = 197913

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 609    gtggttccaaaggaaccaaatttca 633
              ||||||| |||||||||||||||||
Sbjct: 159007 gtggttcaaaaggaaccaaatttca 158983

>gb|AC164398.8| Mus musculus chromosome 7, clone RP23-307M24, complete sequence
          Length = 196756

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 710    caagcaagccatccagtttca 730
              |||||||||||||||||||||
Sbjct: 142144 caagcaagccatccagtttca 142164

>gb|AY744399.1| Uncultured alpha proteobacterium EBAC2C11, complete sequence
          Length = 102726

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 302   ggtgcaggcgctatctccttc 322
             |||||||||||||||||||||
Sbjct: 39252 ggtgcaggcgctatctccttc 39272

>gb|AC111058.10| Mus musculus chromosome 7, clone RP24-562C11, complete sequence
          Length = 211691

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 710   caagcaagccatccagtttca 730
             |||||||||||||||||||||
Sbjct: 27588 caagcaagccatccagtttca 27608

>ref|XM_584750.2| PREDICTED: Bos taurus similar to transient receptor potential cation
            channel, subfamily M, member 2 isoform LF-TRPM2
            (LOC508029), mRNA
          Length = 6046

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 289  ctcttgatgatgaggtgcagg 309
            |||||||||||||||||||||
Sbjct: 3182 ctcttgatgatgaggtgcagg 3162

>gb|AC005531.2| Homo sapiens PAC clone RP4-701O16 from 7, complete sequence
          Length = 161910

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 760    tgaggaagaacaacttccatc 780
              |||||||||||||||||||||
Sbjct: 106313 tgaggaagaacaacttccatc 106293

>gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, complete sequence
          Length = 185146

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 609   gtggttccaaaggaaccaaatttca 633
             ||||||| |||||||||||||||||
Sbjct: 16606 gtggttcaaaaggaaccaaatttca 16582

>ref|XM_695224.1| PREDICTED: Danio rerio similar to CDW92 antigen (LOC571619), mRNA
          Length = 2286

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 372  acaccattttctctggatgaagatg 396
            |||||||||||||||||||| ||||
Sbjct: 2152 acaccattttctctggatgaggatg 2176

>emb|CR407559.8| Zebrafish DNA sequence from clone CH211-283G2 in linkage group 5,
            complete sequence
          Length = 149707

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 372  acaccattttctctggatgaagatg 396
            |||||||||||||||||||| ||||
Sbjct: 3425 acaccattttctctggatgaggatg 3401

>dbj|AP006619.1| Nocardia farcinica IFM 10152 plasmid pNF1 DNA, complete sequence
          Length = 184026

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 214    gctcgccggtggcggggaacc 234
              |||||||||||||||||||||
Sbjct: 112342 gctcgccggtggcggggaacc 112362


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 174,898,024
Number of extensions: 8870870
Number of successful extensions: 163884
Number of sequences better than 10.0: 23
Number of HSP's gapped: 163874
Number of HSP's successfully gapped: 34
Length of query: 1028
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1005
Effective length of database: 18,503,978,556
Effective search space: 18596498448780
Effective search space used: 18596498448780
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)