| Clone Name | FLbaf47f06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009425.1| Triticum aestivum clone wlmk1.pk0020.h8:fis, full insert mRNA sequence Length = 1902 Score = 87.7 bits (44), Expect = 2e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 833 ccatgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgct 892 |||||||||||||||||||| | |||||||| || |||||||||||||||||| ||| Sbjct: 150 ccatgaattacatattatctttgagttatttggaccttccccatcacctaagatattgcc 209 Query: 893 tattgtacttggctctgtttcctgaaga 920 ||||||| ||| || ||||||||||||| Sbjct: 210 tattgtatttgactatgtttcctgaaga 237 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2179 tttggcatccagcgcctctccagccttgct 2208 ||||||||||||| ||||||||||||||| Sbjct: 1514 tttggcatccagcatctctccagccttgct 1543
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 79.8 bits (40), Expect = 5e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||||||||||||| ||||| ||||| ||||||| ||| |||||||| || || Sbjct: 165210 atgaaatacatattatctctgagttactttgaccttccccctcatctaagaagttgtcta 165269 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| |||||| ||||||| ||||| ||| ||||||| | |||| | |||| |||| Sbjct: 165270 ttgtatttggctatgtttcccgaagattgtttgattgaaaaggagcggttagtacacaga 165329 Query: 955 tggatttc 962 |||||||| Sbjct: 165330 tggatttc 165337 Score = 44.1 bits (22), Expect = 2.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||| ||| |||| Sbjct: 165078 aaatgtggtggtttaccactggccatcaatgccatatctagattgctggc 165127 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2179 tttggcatccagcgcctctccagccttgct 2208 ||||||||||||| ||||||||||||||| Sbjct: 166575 tttggcatccagcatctctccagccttgct 166604
>gb|AF458262.1| Triticum monococcum isolate Tm13010 rga1 gene, partial sequence Length = 2305 Score = 79.8 bits (40), Expect = 5e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||||||||||||| ||||| ||||| ||||||| ||| |||||||| || || Sbjct: 2047 atgaaatacatattatctctgagttactttgaccttccccctcatctaagaagttgtcta 2106 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| |||||| ||||||| ||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2107 ttgtatttggctatgtttcccgaagattgtttgattgaaaaggagcggttagtacacaga 2166 Query: 955 tggatttc 962 |||||||| Sbjct: 2167 tggatttc 2174 Score = 44.1 bits (22), Expect = 2.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||| ||| |||| Sbjct: 1915 aaatgtggtggtttaccactggccatcaatgccatatctagattgctggc 1964
>gb|AF458261.1| Triticum turgidum subsp. dicoccoides isolate Td9803 rga1 gene, partial sequence Length = 2288 Score = 79.8 bits (40), Expect = 5e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||||||||||||| ||||| ||||| ||||||| ||| |||||||| || || Sbjct: 2030 atgaaatacatattatctctgagttactttgaccttccccctcatctaagaagttgtcta 2089 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| |||||| ||||||| ||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2090 ttgtatttggctatgtttcccgaagattgtttgattgaaaaggagcggttagtacacaga 2149 Query: 955 tggatttc 962 |||||||| Sbjct: 2150 tggatttc 2157 Score = 44.1 bits (22), Expect = 2.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||| ||| |||| Sbjct: 1898 aaatgtggtggtttaccactggccatcaatgccatatctagattgctggc 1947
>gb|AF458260.1| Triticum turgidum subsp. dicoccoides isolate Td4467 rga1 gene, partial sequence Length = 1527 Score = 79.8 bits (40), Expect = 5e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||||||||||||| ||||| ||||| ||||||| ||| |||||||| || || Sbjct: 1269 atgaaatacatattatctctgagttactttgaccttccccctcatctaagaagttgtcta 1328 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| |||||| ||||||| ||||| ||| ||||||| | |||| | |||| |||| Sbjct: 1329 ttgtatttggctatgtttcccgaagattgtttgattgaaaaggagcggttagtacacaga 1388 Query: 955 tggatttc 962 |||||||| Sbjct: 1389 tggatttc 1396 Score = 44.1 bits (22), Expect = 2.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||| ||| |||| Sbjct: 1137 aaatgtggtggtttaccactggccatcaatgccatatctagattgctggc 1186
>gb|AF458257.1| Triticum aestivum isolate Weique rga1 gene, partial sequence Length = 1527 Score = 79.8 bits (40), Expect = 5e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||||||||||||| ||||| ||||| ||||||| ||| |||||||| || || Sbjct: 1269 atgaaatacatattatctctgagttactttgaccttccccctcatctaagaagttgtcta 1328 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| |||||| ||||||| ||||| ||| ||||||| | |||| | |||| |||| Sbjct: 1329 ttgtatttggctatgtttcccgaagattgtttgattgaaaaggagcggttagtacacaga 1388 Query: 955 tggatttc 962 |||||||| Sbjct: 1389 tggatttc 1396 Score = 44.1 bits (22), Expect = 2.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||| ||| |||| Sbjct: 1137 aaatgtggtggtttaccactggccatcaatgccatatctagattgctggc 1186
>gb|AY270158.1| Triticum aestivum resistance protein CAN_RGA1 gene, partial cds Length = 3885 Score = 71.9 bits (36), Expect = 1e-08 Identities = 105/128 (82%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||||||||||||| ||||| ||||| ||||||| | | |||||||| || || Sbjct: 2413 atgaaatacatattatctctgagttactttgaccttccccctgatctaagaagttgtcta 2472 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| |||||| ||||||| ||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2473 ttgtatttggctatgtttcccgaagattgtttgattgaaaaggagcggttagtacacaga 2532 Query: 955 tggatttc 962 |||||||| Sbjct: 2533 tggatttc 2540 Score = 44.1 bits (22), Expect = 2.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||| ||| |||| Sbjct: 2281 aaatgtggtggtttaccactggccatcaatgccatatctagattgctggc 2330 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2179 tttggcatccagcgcctctccagccttgct 2208 ||||||||||||| ||||||||||||||| Sbjct: 3778 tttggcatccagcatctctccagccttgct 3807
>gb|AF458250.1| Triticum aestivum isolate Can3842 rga1 gene, partial sequence Length = 2335 Score = 71.9 bits (36), Expect = 1e-08 Identities = 105/128 (82%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||||||||||||| ||||| ||||| ||||||| | | |||||||| || || Sbjct: 2077 atgaaatacatattatctctgagttactttgaccttccccctgatctaagaagttgtcta 2136 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| |||||| ||||||| ||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2137 ttgtatttggctatgtttcccgaagattgtttgattgaaaaggagcggttagtacacaga 2196 Query: 955 tggatttc 962 |||||||| Sbjct: 2197 tggatttc 2204 Score = 44.1 bits (22), Expect = 2.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||| ||| |||| Sbjct: 1945 aaatgtggtggtttaccactggccatcaatgccatatctagattgctggc 1994
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 67.9 bits (34), Expect = 2e-07 Identities = 37/38 (97%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 |||||||||||||||| ||||||||||||||||||||| Sbjct: 82114 gtctctattgttggatttggagggttgggcaagaccac 82151 Score = 67.9 bits (34), Expect = 2e-07 Identities = 37/38 (97%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 |||||||||||||||| ||||||||||||||||||||| Sbjct: 121827 gtctctattgttggatttggagggttgggcaagaccac 121864 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Minus Query: 427 aggtactttatcataattgatgatatatggga 458 |||||| | ||||||||||||||||||||||| Sbjct: 187039 aggtacctcatcataattgatgatatatggga 187008 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 83424 tcataattgatgatatatggga 83445 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 123137 tcataattgatgatatatggga 123158
>emb|AJ302299.1|HVU302299 Hordeum vulgare genomic sequence, clone BAC 711N16, isolate Mla-RGH1f Length = 2853 Score = 67.9 bits (34), Expect = 2e-07 Identities = 37/38 (97%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 |||||||||||||||| ||||||||||||||||||||| Sbjct: 598 gtctctattgttggatttggagggttgggcaagaccac 635 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 839 tcataattgatgatatatggga 860
>emb|AJ302298.1|HVU302298 Hordeum vulgare genomic sequence, clone BAC 80H14, isolate Mla-RGH1e Length = 2853 Score = 67.9 bits (34), Expect = 2e-07 Identities = 37/38 (97%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 |||||||||||||||| ||||||||||||||||||||| Sbjct: 598 gtctctattgttggatttggagggttgggcaagaccac 635 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 839 tcataattgatgatatatggga 860
>gb|AY270157.1| Triticum aestivum resistance protein LR10 gene, complete cds Length = 3938 Score = 63.9 bits (32), Expect = 3e-06 Identities = 104/128 (81%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||| ||||||||| |||||||||| ||||||| || |||||||| || ||| Sbjct: 2385 atgaaatacaaattatctctgtgttattttgaccttcccctccatctaagaagttgttta 2444 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| ||| | ||||||||||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2445 ttgtatttgattatgtttcctgaagattgtttgattgaaaaggagcggttagtacacaga 2504 Query: 955 tggatttc 962 |||||||| Sbjct: 2505 tggatttc 2512 Score = 52.0 bits (26), Expect = 0.012 Identities = 44/50 (88%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||||||| |||| Sbjct: 2256 aaatgtggtggtttaccactggccatcaatgccatatctagcttgctggc 2305 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2179 tttggcatccagcgcctctccagccttgct 2208 ||||||||||||| ||||||||||||||| Sbjct: 3750 tttggcatccagcatctctccagccttgct 3779
>gb|AF458259.1| Triticum turgidum subsp. durum rga1 gene, partial sequence Length = 2311 Score = 63.9 bits (32), Expect = 3e-06 Identities = 104/128 (81%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||| ||||||||| |||||||||| ||||||| || |||||||| || ||| Sbjct: 2053 atgaaatacaaattatctctgtgttattttgaccttcccctccatctaagaagttgttta 2112 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| ||| | ||||||||||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2113 ttgtatttgattatgtttcctgaagattgtttgattgaaaaggagcggttagtacacaga 2172 Query: 955 tggatttc 962 |||||||| Sbjct: 2173 tggatttc 2180 Score = 52.0 bits (26), Expect = 0.012 Identities = 44/50 (88%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||||||| |||| Sbjct: 1924 aaatgtggtggtttaccactggccatcaatgccatatctagcttgctggc 1973
>gb|AF458258.1| Triticum aestivum isolate ThLr10 rga1 gene, partial sequence Length = 2311 Score = 63.9 bits (32), Expect = 3e-06 Identities = 104/128 (81%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||| ||||||||| |||||||||| ||||||| || |||||||| || ||| Sbjct: 2053 atgaaatacaaattatctctgtgttattttgaccttcccctccatctaagaagttgttta 2112 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| ||| | ||||||||||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2113 ttgtatttgattatgtttcctgaagattgtttgattgaaaaggagcggttagtacacaga 2172 Query: 955 tggatttc 962 |||||||| Sbjct: 2173 tggatttc 2180 Score = 52.0 bits (26), Expect = 0.012 Identities = 44/50 (88%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||||||| |||| Sbjct: 1924 aaatgtggtggtttaccactggccatcaatgccatatctagcttgctggc 1973
>gb|AF458256.1| Triticum aestivum isolate Tesia rga1 gene, partial sequence Length = 2311 Score = 63.9 bits (32), Expect = 3e-06 Identities = 104/128 (81%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||| ||||||||| |||||||||| ||||||| || |||||||| || ||| Sbjct: 2053 atgaaatacaaattatctctgtgttattttgaccttcccctccatctaagaagttgttta 2112 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| ||| | ||||||||||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2113 ttgtatttgattatgtttcctgaagattgtttgattgaaaaggagcggttagtacacaga 2172 Query: 955 tggatttc 962 |||||||| Sbjct: 2173 tggatttc 2180 Score = 52.0 bits (26), Expect = 0.012 Identities = 44/50 (88%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||||||| |||| Sbjct: 1924 aaatgtggtggtttaccactggccatcaatgccatatctagcttgctggc 1973
>gb|AF458255.1| Triticum aestivum isolate Pavon rga1 gene, partial sequence Length = 2311 Score = 63.9 bits (32), Expect = 3e-06 Identities = 104/128 (81%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||| ||||||||| |||||||||| ||||||| || |||||||| || ||| Sbjct: 2053 atgaaatacaaattatctctgtgttattttgaccttcccctccatctaagaagttgttta 2112 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| ||| | ||||||||||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2113 ttgtatttgattatgtttcctgaagattgtttgattgaaaaggagcggttagtacacaga 2172 Query: 955 tggatttc 962 |||||||| Sbjct: 2173 tggatttc 2180 Score = 52.0 bits (26), Expect = 0.012 Identities = 44/50 (88%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||||||| |||| Sbjct: 1924 aaatgtggtggtttaccactggccatcaatgccatatctagcttgctggc 1973
>gb|AF458254.1| Triticum aestivum isolate Opata rga1 gene, partial sequence Length = 2310 Score = 63.9 bits (32), Expect = 3e-06 Identities = 104/128 (81%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||| ||||||||| |||||||||| ||||||| || |||||||| || ||| Sbjct: 2052 atgaaatacaaattatctctgtgttattttgaccttcccctccatctaagaagttgttta 2111 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| ||| | ||||||||||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2112 ttgtatttgattatgtttcctgaagattgtttgattgaaaaggagcggttagtacacaga 2171 Query: 955 tggatttc 962 |||||||| Sbjct: 2172 tggatttc 2179 Score = 52.0 bits (26), Expect = 0.012 Identities = 44/50 (88%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||||||| |||| Sbjct: 1923 aaatgtggtggtttaccactggccatcaatgccatatctagcttgctggc 1972
>gb|AF458253.1| Triticum aestivum isolate Nocazari rga1 gene, partial sequence Length = 2311 Score = 63.9 bits (32), Expect = 3e-06 Identities = 104/128 (81%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||| ||||||||| |||||||||| ||||||| || |||||||| || ||| Sbjct: 2053 atgaaatacaaattatctctgtgttattttgaccttcccctccatctaagaagttgttta 2112 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| ||| | ||||||||||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2113 ttgtatttgattatgtttcctgaagattgtttgattgaaaaggagcggttagtacacaga 2172 Query: 955 tggatttc 962 |||||||| Sbjct: 2173 tggatttc 2180 Score = 52.0 bits (26), Expect = 0.012 Identities = 44/50 (88%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||||||| |||| Sbjct: 1924 aaatgtggtggtttaccactggccatcaatgccatatctagcttgctggc 1973
>gb|AF458252.1| Triticum aestivum isolate Galvez rga1 gene, partial sequence Length = 2311 Score = 63.9 bits (32), Expect = 3e-06 Identities = 104/128 (81%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||| ||||||||| |||||||||| ||||||| || |||||||| || ||| Sbjct: 2053 atgaaatacaaattatctctgtgttattttgaccttcccctccatctaagaagttgttta 2112 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| ||| | ||||||||||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2113 ttgtatttgattatgtttcctgaagattgtttgattgaaaaggagcggttagtacacaga 2172 Query: 955 tggatttc 962 |||||||| Sbjct: 2173 tggatttc 2180 Score = 52.0 bits (26), Expect = 0.012 Identities = 44/50 (88%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||||||| |||| Sbjct: 1924 aaatgtggtggtttaccactggccatcaatgccatatctagcttgctggc 1973
>gb|AF458251.1| Triticum aestivum isolate Esmera rga1 gene, partial sequence Length = 2311 Score = 63.9 bits (32), Expect = 3e-06 Identities = 104/128 (81%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||| ||||||||| |||||||||| ||||||| || |||||||| || ||| Sbjct: 2053 atgaaatacaaattatctctgtgttattttgaccttcccctccatctaagaagttgttta 2112 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| ||| | ||||||||||||| ||| ||||||| | |||| | |||| |||| Sbjct: 2113 ttgtatttgattatgtttcctgaagattgtttgattgaaaaggagcggttagtacacaga 2172 Query: 955 tggatttc 962 |||||||| Sbjct: 2173 tggatttc 2180 Score = 52.0 bits (26), Expect = 0.012 Identities = 44/50 (88%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||||||| |||| Sbjct: 1924 aaatgtggtggtttaccactggccatcaatgccatatctagcttgctggc 1973
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 63.9 bits (32), Expect = 3e-06 Identities = 104/128 (81%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| |||| ||||||||| |||||||||| ||||||| || |||||||| || ||| Sbjct: 178860 atgaaatacaaattatctctgtgttattttgaccttcccctccatctaagaagttgttta 178919 Query: 895 ttgtacttggctctgtttcctgaagaccattttattgaaaggcagcgactggtacgcaga 954 ||||| ||| | ||||||||||||| ||| ||||||| | |||| | |||| |||| Sbjct: 178920 ttgtatttgattatgtttcctgaagattgtttgattgaaaaggagcggttagtacacaga 178979 Query: 955 tggatttc 962 |||||||| Sbjct: 178980 tggatttc 178987 Score = 52.0 bits (26), Expect = 0.012 Identities = 44/50 (88%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||||||| |||| Sbjct: 178731 aaatgtggtggtttaccactggccatcaatgccatatctagcttgctggc 178780 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2179 tttggcatccagcgcctctccagccttgct 2208 ||||||||||||| ||||||||||||||| Sbjct: 180224 tttggcatccagcatctctccagccttgct 180253
>gb|AY266445.1| Hordeum vulgare MLA10 (Mla10) mRNA, complete cds Length = 3611 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 1002 gtctccattgttggatttggagggttgggcaagaccac 1039 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 1243 tcataattgatgatatatggga 1264
>gb|AY266444.1| Hordeum vulgare MLA7 (Mla7) mRNA, complete cds Length = 3761 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 1008 gtctccattgttggatttggagggttgggcaagaccac 1045 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 1249 tcataattgatgatatatggga 1270
>gb|AY487917.1| Triticum aestivum Mla-like protein mRNA, partial cds Length = 2466 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 127 gtctccattgttggatttggagggttgggcaagaccac 164
>gb|AF538039.2| Triticum aestivum Mal-like protein mRNA, complete cds Length = 2855 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 140 gtctccattgttggatttggagggttgggcaagaccac 177
>gb|AF458263.1| Triticum monococcum isolate Tm896 rga1 gene, partial sequence Length = 2326 Score = 60.0 bits (30), Expect = 5e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 835 atgaattacatattatctcttagttattttgatcttccccatcacctaagaagctgctta 894 ||||| ||||||||||||| ||||| ||||| ||||||| | | |||||||| || || Sbjct: 2068 atgaaatacatattatctcggagttactttgaccttcccccttatctaagaagttgtcta 2127 Query: 895 ttgtacttggctctgtttcctgaaga 920 ||||| |||||| ||||||| ||||| Sbjct: 2128 ttgtatttggctatgtttcccgaaga 2153
>gb|AY009939.1| Hordeum vulgare Mla1 (Mla1) mRNA, complete cds Length = 3380 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 818 gtctccattgttggatttggagggttgggcaagaccac 855 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 1059 tcataattgatgatatatggga 1080
>gb|AY222610.1| Triticum aestivum mla-like protein mRNA, complete cds Length = 2813 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 562 gtctccattgttggatttggagggttgggcaagaccac 599
>gb|AY196347.1| Hordeum vulgare subsp. vulgare MLA12 (Mla12) gene, complete cds Length = 6604 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 1370 gtctccattgttggatttggagggttgggcaagaccac 1407 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 2657 tcataattgatgatatatggga 2678
>gb|AF523683.1| Hordeum vulgare CC-NBS-LRR resistance protein MLA13 mRNA, complete cds; alternatively spliced Length = 3617 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 900 gtctccattgttggatttggagggttgggcaagaccac 937 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 1141 tcataattgatgatatatggga 1162
>gb|AF523682.1| Hordeum vulgare CC-NBS-LRR resistance protein MLA13 mRNA, complete cds; alternatively spliced Length = 3719 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 1002 gtctccattgttggatttggagggttgggcaagaccac 1039 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 1243 tcataattgatgatatatggga 1264
>gb|AF523681.1| Hordeum vulgare CC-NBS-LRR resistance protein MLA13 mRNA, complete cds; alternatively spliced Length = 3716 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 999 gtctccattgttggatttggagggttgggcaagaccac 1036 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 1240 tcataattgatgatatatggga 1261
>gb|AF523680.1| Hordeum vulgare CC-NBS-LRR resistance protein MLA13 mRNA, complete cds; alternatively spliced Length = 3614 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 897 gtctccattgttggatttggagggttgggcaagaccac 934 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 1138 tcataattgatgatatatggga 1159
>gb|AF523679.1| Hordeum vulgare CC-NBS-LRR resistance protein MLA13 mRNA, complete cds; alternatively spliced Length = 3727 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 1010 gtctccattgttggatttggagggttgggcaagaccac 1047 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 1251 tcataattgatgatatatggga 1272
>gb|AF523678.1| Hordeum vulgare CC-NBS-LRR resistance protein MLA13 gene, complete cds; alternatively spliced Length = 13525 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 2779 gtctccattgttggatttggagggttgggcaagaccac 2816 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 4049 tcataattgatgatatatggga 4070
>gb|AY009938.2| Hordeum vulgare subsp. vulgare MLA1-2 (Mla1-2) gene, partial cds; and MLA1 (Mla1) gene, complete cds Length = 18958 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 10807 gtctccattgttggatttggagggttgggcaagaccac 10844 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Plus Query: 427 aggtactttatcataattgatgatatatggga 458 |||||| | ||||||||||||||||||||||| Sbjct: 1174 aggtacctcatcataattgatgatatatggga 1205 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 12048 tcataattgatgatatatggga 12069
>emb|AJ302293.1|HVU302293 Hordeum vulgare Mla6 gene, exons 1-5 Length = 8074 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 2293 gtctccattgttggatttggagggttgggcaagaccac 2330 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 3526 tcataattgatgatatatggga 3547
>emb|AJ302292.1|HVU302292 Hordeum vulgare mRNA for MLA6 protein Length = 2871 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 589 gtctccattgttggatttggagggttgggcaagaccac 626 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 830 tcataattgatgatatatggga 851
>gb|AF538040.1| Triticum aestivum Mla-like protein mRNA, partial cds Length = 1681 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagaccac 231 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 127 gtctccattgttggatttggagggttgggcaagaccac 164
>ref|NM_001067644.1| Oryza sativa (japonica cultivar-group) Os08g0174800 (Os08g0174800) mRNA, partial cds Length = 4008 Score = 54.0 bits (27), Expect = 0.003 Identities = 39/43 (90%) Strand = Plus / Plus Query: 844 atattatctcttagttattttgatcttccccatcacctaagaa 886 ||||||||||| ||||| |||||||||||||| || ||||||| Sbjct: 1306 atattatctctcagttactttgatcttccccaccatctaagaa 1348
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 54.0 bits (27), Expect = 0.003 Identities = 39/43 (90%) Strand = Plus / Plus Query: 844 atattatctcttagttattttgatcttccccatcacctaagaa 886 ||||||||||| ||||| |||||||||||||| || ||||||| Sbjct: 4351542 atattatctctcagttactttgatcttccccaccatctaagaa 4351584 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Plus Query: 844 atattatctcttagttattttgatcttcccca 875 ||||||||||||||||| ||||| |||||||| Sbjct: 4435817 atattatctcttagttactttgaacttcccca 4435848 Score = 48.1 bits (24), Expect = 0.18 Identities = 39/44 (88%) Strand = Plus / Minus Query: 197 tctattgttggatctggagggttgggcaagaccacactcgccaa 240 |||||||||||||||||||| | |||||||| || |||||||| Sbjct: 19697431 tctattgttggatctggaggtattggcaagacaactctcgccaa 19697388 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 427 aggtactttatcataattgatgatatatgg 456 |||||||| |||||||||||||| |||||| Sbjct: 17465138 aggtacttcatcataattgatgacatatgg 17465109
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 54.0 bits (27), Expect = 0.003 Identities = 39/43 (90%) Strand = Plus / Plus Query: 844 atattatctcttagttattttgatcttccccatcacctaagaa 886 ||||||||||| ||||| |||||||||||||| || ||||||| Sbjct: 114336 atattatctctcagttactttgatcttccccaccatctaagaa 114378
>dbj|AK071471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095L06, full insert sequence Length = 4009 Score = 54.0 bits (27), Expect = 0.003 Identities = 39/43 (90%) Strand = Plus / Plus Query: 844 atattatctcttagttattttgatcttccccatcacctaagaa 886 ||||||||||| ||||| |||||||||||||| || ||||||| Sbjct: 1307 atattatctctcagttactttgatcttccccaccatctaagaa 1349
>gb|AF458264.1| Triticum urartu rga1 gene, partial sequence Length = 2308 Score = 52.0 bits (26), Expect = 0.012 Identities = 44/50 (88%) Strand = Plus / Plus Query: 700 aaatgtcgtggtctgcctctggccatcaatgccatttctagcttgttggc 749 |||||| ||||| | || ||||||||||||||||| ||||||||| |||| Sbjct: 1927 aaatgtggtggtttaccactggccatcaatgccatatctagcttgctggc 1976
>ref|NM_001074930.1| Oryza sativa (japonica cultivar-group) Os11g0657900 (Os11g0657900) mRNA, complete cds Length = 2931 Score = 50.1 bits (25), Expect = 0.046 Identities = 31/33 (93%) Strand = Plus / Plus Query: 426 aaggtactttatcataattgatgatatatggga 458 ||||||| | ||||||||||||||||||||||| Sbjct: 834 aaggtacatcatcataattgatgatatatggga 866
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 50.1 bits (25), Expect = 0.046 Identities = 28/29 (96%) Strand = Plus / Plus Query: 200 attgttggatctggagggttgggcaagac 228 ||||||||||||||||| ||||||||||| Sbjct: 21186660 attgttggatctggaggattgggcaagac 21186688 Score = 46.1 bits (23), Expect = 0.72 Identities = 26/27 (96%) Strand = Plus / Minus Query: 942 actggtacgcagatggatttctgaagg 968 |||| |||||||||||||||||||||| Sbjct: 11703539 actgatacgcagatggatttctgaagg 11703513
>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0038F20 Length = 129595 Score = 50.1 bits (25), Expect = 0.046 Identities = 28/29 (96%) Strand = Plus / Plus Query: 200 attgttggatctggagggttgggcaagac 228 ||||||||||||||||| ||||||||||| Sbjct: 93376 attgttggatctggaggattgggcaagac 93404
>dbj|AK243392.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100064C10, full insert sequence Length = 1897 Score = 48.1 bits (24), Expect = 0.18 Identities = 39/44 (88%) Strand = Plus / Plus Query: 197 tctattgttggatctggagggttgggcaagaccacactcgccaa 240 |||||||||||||||||||| | |||||||| || |||||||| Sbjct: 1125 tctattgttggatctggaggtattggcaagacaactctcgccaa 1168
>ref|NM_001068326.1| Oryza sativa (japonica cultivar-group) Os08g0411900 (Os08g0411900) mRNA, complete cds Length = 2880 Score = 48.1 bits (24), Expect = 0.18 Identities = 39/44 (88%) Strand = Plus / Plus Query: 197 tctattgttggatctggagggttgggcaagaccacactcgccaa 240 |||||||||||||||||||| | |||||||| || |||||||| Sbjct: 568 tctattgttggatctggaggtattggcaagacaactctcgccaa 611
>ref|NM_001067652.1| Oryza sativa (japonica cultivar-group) Os08g0176200 (Os08g0176200) mRNA, complete cds Length = 5061 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Plus Query: 844 atattatctcttagttattttgatcttcccca 875 ||||||||||||||||| ||||| |||||||| Sbjct: 1084 atattatctcttagttactttgaacttcccca 1115
>ref|NM_001062383.1| Oryza sativa (japonica cultivar-group) Os05g0479700 (Os05g0479700) mRNA, complete cds Length = 3399 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Plus Query: 427 aggtactttatcataattgatgatatatggga 458 |||||||| ||||||||||||||| ||||||| Sbjct: 832 aggtacttgatcataattgatgatttatggga 863 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 587 agatgaaaccactcagtgaggctgactcaa 616 ||||||||||||| ||||||| |||||||| Sbjct: 992 agatgaaaccacttagtgaggatgactcaa 1021
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Minus Query: 427 aggtactttatcataattgatgatatatggga 458 |||||||| ||||||||||||||| ||||||| Sbjct: 126111 aggtacttgatcataattgatgatttatggga 126080 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 587 agatgaaaccactcagtgaggctgactcaa 616 ||||||||||||| ||||||| |||||||| Sbjct: 125951 agatgaaaccacttagtgaggatgactcaa 125922
>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0485F09, complete sequence Length = 161276 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Minus Query: 427 aggtactttatcataattgatgatatatggga 458 |||||| | ||||||||||||||||||||||| Sbjct: 118168 aggtacatcatcataattgatgatatatggga 118137
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Minus Query: 427 aggtactttatcataattgatgatatatggga 458 |||||| | ||||||||||||||||||||||| Sbjct: 1324 aggtacatcatcataattgatgatatatggga 1293
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Plus Query: 197 tctattgttggatctggagggttgggcaagac 228 ||||||||||||| |||||| ||||||||||| Sbjct: 37037 tctattgttggatttggaggattgggcaagac 37068 Score = 46.1 bits (23), Expect = 0.72 Identities = 32/35 (91%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagac 228 |||||| ||||||||| |||||| ||||||||||| Sbjct: 52428 gtctctgttgttggatttggaggattgggcaagac 52462 Score = 46.1 bits (23), Expect = 0.72 Identities = 32/35 (91%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagac 228 |||||| ||||||||| |||||| ||||||||||| Sbjct: 89331 gtctctgttgttggatttggaggattgggcaagac 89365
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Plus Query: 197 tctattgttggatctggagggttgggcaagac 228 ||||||||||||| |||||| ||||||||||| Sbjct: 21513518 tctattgttggatttggaggattgggcaagac 21513549 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Minus Query: 427 aggtactttatcataattgatgatatatggga 458 |||||| | ||||||||||||||||||||||| Sbjct: 25511277 aggtacatcatcataattgatgatatatggga 25511246 Score = 46.1 bits (23), Expect = 0.72 Identities = 32/35 (91%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagac 228 |||||| ||||||||| |||||| ||||||||||| Sbjct: 21528909 gtctctgttgttggatttggaggattgggcaagac 21528943 Score = 46.1 bits (23), Expect = 0.72 Identities = 32/35 (91%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagac 228 |||||| ||||||||| |||||| ||||||||||| Sbjct: 21565812 gtctctgttgttggatttggaggattgggcaagac 21565846 Score = 46.1 bits (23), Expect = 0.72 Identities = 32/35 (91%) Strand = Plus / Plus Query: 844 atattatctcttagttattttgatcttccccatca 878 ||||||||||| ||||||| ||||||||| ||||| Sbjct: 23810426 atattatctctgagttattatgatcttcctcatca 23810460
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Minus Query: 427 aggtactttatcataattgatgatatatggga 458 |||||||| ||||||||||||||| ||||||| Sbjct: 23440575 aggtacttgatcataattgatgatttatggga 23440544 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 587 agatgaaaccactcagtgaggctgactcaa 616 ||||||||||||| ||||||| |||||||| Sbjct: 23440415 agatgaaaccacttagtgaggatgactcaa 23440386
>dbj|AP003882.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_B10 Length = 115074 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Plus Query: 844 atattatctcttagttattttgatcttcccca 875 ||||||||||||||||| ||||| |||||||| Sbjct: 82993 atattatctcttagttactttgaacttcccca 83024
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 48.1 bits (24), Expect = 0.18 Identities = 39/44 (88%) Strand = Plus / Minus Query: 197 tctattgttggatctggagggttgggcaagaccacactcgccaa 240 |||||||||||||||||||| | |||||||| || |||||||| Sbjct: 26382 tctattgttggatctggaggtattggcaagacaactctcgccaa 26339
>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0583B06 Length = 134442 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Plus Query: 844 atattatctcttagttattttgatcttcccca 875 ||||||||||||||||| ||||| |||||||| Sbjct: 1707 atattatctcttagttactttgaacttcccca 1738
>ref|NM_001074712.1| Oryza sativa (japonica cultivar-group) Os11g0590400 (Os11g0590400) mRNA, complete cds Length = 2658 Score = 46.1 bits (23), Expect = 0.72 Identities = 32/35 (91%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagac 228 |||||| ||||||||| |||||| ||||||||||| Sbjct: 580 gtctctgttgttggatttggaggattgggcaagac 614
>ref|NM_001074711.1| Oryza sativa (japonica cultivar-group) Os11g0589800 (Os11g0589800) mRNA, complete cds Length = 1854 Score = 46.1 bits (23), Expect = 0.72 Identities = 32/35 (91%) Strand = Plus / Plus Query: 194 gtctctattgttggatctggagggttgggcaagac 228 |||||| ||||||||| |||||| ||||||||||| Sbjct: 526 gtctctgttgttggatttggaggattgggcaagac 560
>ref|NM_001053159.1| Oryza sativa (japonica cultivar-group) Os02g0301800 (Os02g0301800) mRNA, complete cds Length = 3823 Score = 46.1 bits (23), Expect = 0.72 Identities = 26/27 (96%) Strand = Plus / Plus Query: 942 actggtacgcagatggatttctgaagg 968 |||| |||||||||||||||||||||| Sbjct: 1696 actgatacgcagatggatttctgaagg 1722
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 46.1 bits (23), Expect = 0.72 Identities = 32/35 (91%) Strand = Plus / Plus Query: 844 atattatctcttagttattttgatcttccccatca 878 ||||||||||| ||||||| ||||||||| ||||| Sbjct: 146464 atattatctctgagttattatgatcttcctcatca 146498
>emb|BX511094.6| Zebrafish DNA sequence from clone CH211-137G12 in linkage group 19, complete sequence Length = 154360 Score = 46.1 bits (23), Expect = 0.72 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1985 tgtcactgtgtttcagagaggac 2007 ||||||||||||||||||||||| Sbjct: 53515 tgtcactgtgtttcagagaggac 53493
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0010K08 Length = 184760 Score = 46.1 bits (23), Expect = 0.72 Identities = 26/27 (96%) Strand = Plus / Minus Query: 942 actggtacgcagatggatttctgaagg 968 |||| |||||||||||||||||||||| Sbjct: 149828 actgatacgcagatggatttctgaagg 149802
>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0477B05 Length = 142166 Score = 46.1 bits (23), Expect = 0.72 Identities = 26/27 (96%) Strand = Plus / Minus Query: 942 actggtacgcagatggatttctgaagg 968 |||| |||||||||||||||||||||| Sbjct: 11429 actgatacgcagatggatttctgaagg 11403
>dbj|AK101276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033B21, full insert sequence Length = 4410 Score = 46.1 bits (23), Expect = 0.72 Identities = 26/27 (96%) Strand = Plus / Plus Query: 942 actggtacgcagatggatttctgaagg 968 |||| |||||||||||||||||||||| Sbjct: 3681 actgatacgcagatggatttctgaagg 3707
>dbj|AK067818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H12, full insert sequence Length = 3823 Score = 46.1 bits (23), Expect = 0.72 Identities = 26/27 (96%) Strand = Plus / Plus Query: 942 actggtacgcagatggatttctgaagg 968 |||| |||||||||||||||||||||| Sbjct: 1696 actgatacgcagatggatttctgaagg 1722
>emb|AJ302296.1|HVU302296 Hordeum vulgare genomic sequence, clone BAC 80H14, isolate Mla-RGH1bcd Length = 2833 Score = 46.1 bits (23), Expect = 0.72 Identities = 23/23 (100%) Strand = Plus / Plus Query: 436 atcataattgatgatatatggga 458 ||||||||||||||||||||||| Sbjct: 835 atcataattgatgatatatggga 857
>ref|NM_001068197.1| Oryza sativa (japonica cultivar-group) Os08g0373400 (Os08g0373400) mRNA, complete cds Length = 2901 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 427 aggtactttatcataattgatgatatatgg 456 |||||||| |||||||||||||| |||||| Sbjct: 829 aggtacttcatcataattgatgacatatgg 858
>gb|BC076534.1| Danio rerio cDNA clone IMAGE:7036114, containing frame-shift errors Length = 3075 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2797 gtatttttccattaatatttgt 2818 |||||||||||||||||||||| Sbjct: 2986 gtatttttccattaatatttgt 3007
>gb|AY266443.1| Hordeum vulgare MLA13-2 (Mla13-2) gene and LINE element Lauren, partial sequence; Copia/Ty1-like retrotransposon HORPIA-4 and Copia/Ty1-like retrotransposon HORPIA-5, complete sequence Length = 18901 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 9558 tcataattgatgatatatggga 9579
>gb|AY266442.1| Hordeum vulgare LINE element Lauren, partial sequence; MLA6-2 (Mla6-2) gene, complete cds, alternatively spliced; Copia/Ty1-like retrotransposon HORPIA-4 and Copia/Ty1-like retrotransposon HORPIA-5, complete sequence Length = 17053 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tcataattgatgatatatggga 458 |||||||||||||||||||||| Sbjct: 8294 tcataattgatgatatatggga 8315
>gb|AC123940.4| Mus musculus BAC clone RP23-440M11 from chromosome 12, complete sequence Length = 197665 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1718 agtccaaggaaaagctggtgtc 1739 |||||||||||||||||||||| Sbjct: 188405 agtccaaggaaaagctggtgtc 188426
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 2.9 Identities = 34/38 (89%) Strand = Plus / Minus Query: 200 attgttggatctggagggttgggcaagaccacactcgc 237 |||||||||| || ||| |||||||||||||| ||||| Sbjct: 3237474 attgttggatgtgcaggcttgggcaagaccactctcgc 3237437
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2179 tttggcatccagcgcctctcca 2200 |||||||||||||||||||||| Sbjct: 2142872 tttggcatccagcgcctctcca 2142893
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2179 tttggcatccagcgcctctcca 2200 |||||||||||||||||||||| Sbjct: 2176770 tttggcatccagcgcctctcca 2176791
>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14 Length = 150650 Score = 44.1 bits (22), Expect = 2.9 Identities = 34/38 (89%) Strand = Plus / Minus Query: 200 attgttggatctggagggttgggcaagaccacactcgc 237 |||||||||| || ||| |||||||||||||| ||||| Sbjct: 24837 attgttggatgtgcaggcttgggcaagaccactctcgc 24800
>dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690C12 Length = 139693 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 427 aggtactttatcataattgatgatatatgg 456 |||||||| |||||||||||||| |||||| Sbjct: 75983 aggtacttcatcataattgatgacatatgg 75954
>dbj|AB014906.1| Aquaspirillum itersonii gyrB gene for DNA gyrase subunit B, partial cds, clone:gy10018.icb Length = 1176 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1721 ccaaggaaaagctggtgtcctc 1742 |||||||||||||||||||||| Sbjct: 698 ccaaggaaaagctggtgtcctc 719
>dbj|AB014905.1| Aquaspirillum itersonii gyrB gene for DNA gyrase subunit B, partial cds, clone:gy10017.icb Length = 1176 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1721 ccaaggaaaagctggtgtcctc 1742 |||||||||||||||||||||| Sbjct: 698 ccaaggaaaagctggtgtcctc 719
>gb|AC149586.6| Mus musculus BAC clone RP24-510C9 from 12, complete sequence Length = 198641 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1718 agtccaaggaaaagctggtgtc 1739 |||||||||||||||||||||| Sbjct: 88045 agtccaaggaaaagctggtgtc 88066
>ref|XM_774723.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_170_72946_75846) partial mRNA Length = 2901 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2353 aggaggaaatagatatggccgg 2374 |||||||||||||||||||||| Sbjct: 446 aggaggaaatagatatggccgg 467 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 563,625,393 Number of extensions: 31567492 Number of successful extensions: 158055 Number of sequences better than 10.0: 84 Number of HSP's gapped: 158055 Number of HSP's successfully gapped: 139 Length of query: 2943 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2920 Effective length of database: 18,503,978,556 Effective search space: 54031617383520 Effective search space used: 54031617383520 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)