ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf41f13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001050126.1| Oryza sativa (japonica cultivar-group) Os01g0618500 (Os01g0618500) mRNA, complete cds Length = 2053 Score = 995 bits (502), Expect = 0.0 Identities = 997/1162 (85%) Strand = Plus / Plus Query: 699 taaatttgcttgtgatgtgccctactagagagcttgcaaaccaagtcgctgttgaggcca 758 |||||||||||||||| ||||| || || ||||| ||||||||||| |||| |||||||| Sbjct: 522 taaatttgcttgtgatatgccccacaagggagctagcaaaccaagtggctgctgaggcca 581 Query: 759 aaaagcttctcaagtatcatcgcttgctaggtgttcaggttgtaattggtggcacaagaa 818 |||||||||||||||||||||| || ||||| |||||||||||||| ||||||| | Sbjct: 582 ggaagcttctcaagtatcatcgctcactgggtgtgcaggttgtaattggcggcacaaaat 641 Query: 819 taactctagagcaacgaaacatgcaggctaacccgtgtcagattcttgttgctacacctg 878 || ||| ||| ||||||| |||||| |||| || ||||||||||||||||||||||| | Sbjct: 642 tacctcaagaacaacgaagcatgcaatctaatccttgtcagattcttgttgctacaccgg 701 Query: 879 gaaggcttaaggatcatcttgagaacacacctggtttttctactcggctaaaaggggtga 938 ||||||||||||||||||||||||| |||||||||||||| | || | |||||||||| Sbjct: 702 gaaggcttaaggatcatcttgagaatacacctggtttttccaaccgaattaaaggggtga 761 Query: 939 aggttcttgttcttgatgaagctgaccgcttactggatatgggattcagaagagatattg 998 | ||||||||||||||||||||||||||| || ||||||||||||| |||||||| |||| Sbjct: 762 aagttcttgttcttgatgaagctgaccgcctattggatatgggatttagaagagacattg 821 Query: 999 aaaaaattatggctgccactcctaaagaccgtcagacgctgctgttttctgctactgttc 1058 | |||||||| ||| || ||||||||| || ||||| || || |||||||||||||||| Sbjct: 822 agaaaattattgctttcattcctaaagaacgacagacacttcttttttctgctactgttc 881 Query: 1059 cagaagaggtccgtcaaatctctcatgtagcaatgaggaaggactataggttcattaaca 1118 |||||||||| |||||||| || || | ||||||| || || || | ||||||||| | Sbjct: 882 cagaagaggttcgtcaaatttcgcacattgcaatgaagaggggttacaagttcattaata 941 Query: 1119 ctgttaaagagggtgacgaggagacacattcacaggttagccagatgtatatgattgcac 1178 |||||||||||||||| |||||||||||||||||||| || |||||||| ||| |||||| Sbjct: 942 ctgttaaagagggtgatgaggagacacattcacaggtaagtcagatgtacatggttgcac 1001 Query: 1179 cacttgatctgcacttctctatattatatgatgtactgaagaagcatgtcactgaggatg 1238 ||||||| ||||||||||||||||| || ||||||||||||||||| || | || |||| Sbjct: 1002 cacttgacctgcacttctctatattgtacaatgtactgaagaagcatatcgcagaagatg 1061 Query: 1239 cggactacaaagtgattatattctgtactacagcaatggtcacaaaacttgttgctgaag 1298 | ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 1062 cagactacaaagtgattgtattctgtactactgcaatggtcaccaaacttgttgctgaag 1121 Query: 1299 ttctctctcagctgaatctgaatataagagagattcattccagaaagtcacaatctgcaa 1358 |||| || |||||||| ||||||||||||||||| ||||| |||||||| ||||| |||| Sbjct: 1122 ttctttcccagctgaaactgaatataagagagatccattcgagaaagtcgcaatcagcaa 1181 Query: 1359 gaactaaggtgtcggatgaattcagaaggtcaaagggtgtgatattagttagttccgatg 1418 |||||||||| || |||||||| || | ||||||||| |||||||||| ||||| |||| Sbjct: 1182 gaactaaggtctcagatgaatttaggaaatcaaagggtctgatattagtgagttctgatg 1241 Query: 1419 tatctgctcgtggtgttgattatcctgacgtcaccctcgtcatacaggttgggattcctt 1478 |||||||||||||||||||||||||||| |||||||| ||||||||||||||| | || Sbjct: 1242 tatctgctcgtggtgttgattatcctgatgtcacccttgtcatacaggttgggctgccag 1301 Query: 1479 ctggtagagagcagtatatacatagaattggtaggacaggacggaaaggcaaggaagggc 1538 ||| |||||| ||||||||||||||| ||||||| || |||||||||||||| || |||| Sbjct: 1302 ctgatagagaacagtatatacatagacttggtagaactggacggaaaggcaaagatgggc 1361 Query: 1539 agggcctcttactgttggctccctgggaaagtcattttcttaccagcgtgaaagatctgt 1598 || ||||||||||||||||||||||||| | ||||| | ||||| | ||| ||| Sbjct: 1362 taggtctcttactgttggctccctgggaaacatactttctgaatagcgttcaggatttgt 1421 Query: 1599 cagtatcagaggctgtgacaccttcagttgattcaagcactcaaacagaagtgaaagggg 1658 | |||||| | |||||| |||| || ||||||| |||| ||| |||| ||| |||| | Sbjct: 1422 ctgtatcacaagctgtggtacctacaattgattcgagcattcagacaggagtcaaagatg 1481 Query: 1659 cactcagaagagtagagatgaagagcaaggaatcagcatatcaagcatggttagggtact 1718 ||||| ||||||| |||| ||||||||||||||||| || || |||||| ||||||||| Sbjct: 1482 cactcggaagagtggagacaaagagcaaggaatcagcctaccaggcatggctagggtact 1541 Query: 1719 acaactcaaacaagaccattggtgggaacaagtccagacttgttagtctcggcgaagagt 1778 |||||||||||||| | ||| || | |||| |||||||||||||| |||| ||||||| Sbjct: 1542 acaactcaaacaaggctattagtcgagacaaatccagacttgttaggctcgcagaagagt 1601 Query: 1779 tcagccggagcatggggcttgcagccccaccagccatacccaagctcattcttcggaaga 1838 |||||| ||||||||| |||||| || || ||||||||||| ||||||||||| || | Sbjct: 1602 tcagccagagcatgggtcttgcaattccgcctgccatacccaaactcattcttcgaaaaa 1661 Query: 1839 tgggtcttagcaaagttcctgg 1860 |||| |||| ||| |||||||| Sbjct: 1662 tgggccttaacaatgttcctgg 1683 Score = 228 bits (115), Expect = 7e-56 Identities = 238/279 (85%) Strand = Plus / Plus Query: 388 ggaagggaaggctttgcaattggatgcggagaaggtcggtggcgaggcgggaggcgtgga 447 ||||||||||||| || | |||||||||| || | || || ||||| ||||||||||| Sbjct: 229 ggaagggaaggctatggagttggatgcggggatgagcgctgccgaggtgggaggcgtggt 288 Query: 448 cggctcctacctcagcgagacacggtttgatcagtgtgctatttctgaattgtcactgaa 507 ||||| | |||||||||||||| |||||||| ||| || ||||| |||||| |||| Sbjct: 289 tggctcgcatctcagcgagacacgatttgatcaatgtcctgtttctccgttgtcattgaa 348 Query: 508 aggcgtcaaagatgctggatatggaaggatgacccaggttcaggaggcaactctaccagt 567 || |||||||||||||||||| || |||||||||||| |||||||||||||| ||| | Sbjct: 349 agcaatcaaagatgctggatatgaaaagatgacccaggtgcaggaggcaactctgccaat 408 Query: 568 aatccttcaaggcaaagatgttcttgcgaaagcgaagacaggaacaggaaaaaccgttgc 627 |||||||||||| ||||||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 409 aatccttcaaggtgaagatgttcttgcaaaagcaaagacagggacaggaaaaactgttgc 468 Query: 628 ctttttgctgccagccattgaggttctctctaaattacc 666 ||||||||| ||||||||||| ||||||||| |||||| Sbjct: 469 ctttttgcttccagccattgaacttctctctacattacc 507
>dbj|AK067476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107O15, full insert sequence Length = 2054 Score = 987 bits (498), Expect = 0.0 Identities = 996/1162 (85%) Strand = Plus / Plus Query: 699 taaatttgcttgtgatgtgccctactagagagcttgcaaaccaagtcgctgttgaggcca 758 |||||||||||||||| ||||| || || ||||| ||||||||||| |||| |||||||| Sbjct: 523 taaatttgcttgtgatatgccccacaagggagctagcaaaccaagtggctgctgaggcca 582 Query: 759 aaaagcttctcaagtatcatcgcttgctaggtgttcaggttgtaattggtggcacaagaa 818 |||||||||||||||||||||| || ||||| |||||||||||||| ||||||| | Sbjct: 583 ggaagcttctcaagtatcatcgctcactgggtgtgcaggttgtaattggcggcacaaaat 642 Query: 819 taactctagagcaacgaaacatgcaggctaacccgtgtcagattcttgttgctacacctg 878 || ||| ||| ||||||| |||||| |||| || ||||||||||||||||||||||| | Sbjct: 643 tacctcaagaacaacgaagcatgcaatctaatccttgtcagattcttgttgctacaccgg 702 Query: 879 gaaggcttaaggatcatcttgagaacacacctggtttttctactcggctaaaaggggtga 938 ||||||||||||||||||||||||| |||||||||||||| | || | |||||||||| Sbjct: 703 gaaggcttaaggatcatcttgagaatacacctggtttttccaaccgaattaaaggggtga 762 Query: 939 aggttcttgttcttgatgaagctgaccgcttactggatatgggattcagaagagatattg 998 | ||||||||||||||||||||||||||| || ||||||||||||| |||||||| |||| Sbjct: 763 aagttcttgttcttgatgaagctgaccgcctattggatatgggatttagaagagacattg 822 Query: 999 aaaaaattatggctgccactcctaaagaccgtcagacgctgctgttttctgctactgttc 1058 | |||||||| ||| || ||||||||| || ||||| || || |||||||||||||||| Sbjct: 823 agaaaattattgctttcattcctaaagaacgacagacacttcttttttctgctactgttc 882 Query: 1059 cagaagaggtccgtcaaatctctcatgtagcaatgaggaaggactataggttcattaaca 1118 |||||||||| |||||||| | || | ||||||| || || || | ||||||||| | Sbjct: 883 cagaagaggttcgtcaaatttggcacattgcaatgaagaggggttacaagttcattaata 942 Query: 1119 ctgttaaagagggtgacgaggagacacattcacaggttagccagatgtatatgattgcac 1178 |||||||||||||||| |||||||||||||||||||| || |||||||| ||| |||||| Sbjct: 943 ctgttaaagagggtgatgaggagacacattcacaggtaagtcagatgtacatggttgcac 1002 Query: 1179 cacttgatctgcacttctctatattatatgatgtactgaagaagcatgtcactgaggatg 1238 ||||||| ||||||||||||||||| || ||||||||||||||||| || | || |||| Sbjct: 1003 cacttgacctgcacttctctatattgtacaatgtactgaagaagcatatcgcagaagatg 1062 Query: 1239 cggactacaaagtgattatattctgtactacagcaatggtcacaaaacttgttgctgaag 1298 | ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 1063 cagactacaaagtgattgtattctgtactactgcaatggtcaccaaacttgttgctgaag 1122 Query: 1299 ttctctctcagctgaatctgaatataagagagattcattccagaaagtcacaatctgcaa 1358 |||| || |||||||| ||||||||||||||||| ||||| |||||||| ||||| |||| Sbjct: 1123 ttctttcccagctgaaactgaatataagagagatccattcgagaaagtcgcaatcagcaa 1182 Query: 1359 gaactaaggtgtcggatgaattcagaaggtcaaagggtgtgatattagttagttccgatg 1418 |||||||||| || |||||||| || | ||||||||| |||||||||| ||||| |||| Sbjct: 1183 gaactaaggtctcagatgaatttaggaaatcaaagggtctgatattagtgagttctgatg 1242 Query: 1419 tatctgctcgtggtgttgattatcctgacgtcaccctcgtcatacaggttgggattcctt 1478 |||||||||||||||||||||||||||| |||||||| ||||||||||||||| | || Sbjct: 1243 tatctgctcgtggtgttgattatcctgatgtcacccttgtcatacaggttgggctgccag 1302 Query: 1479 ctggtagagagcagtatatacatagaattggtaggacaggacggaaaggcaaggaagggc 1538 ||| |||||| ||||||||||||||| ||||||| || |||||||||||||| || |||| Sbjct: 1303 ctgatagagaacagtatatacatagacttggtagaactggacggaaaggcaaagatgggc 1362 Query: 1539 agggcctcttactgttggctccctgggaaagtcattttcttaccagcgtgaaagatctgt 1598 || ||||||||||||||||||||||||| | ||||| | ||||| | ||| ||| Sbjct: 1363 taggtctcttactgttggctccctgggaaacatactttctgaatagcgttcaggatttgt 1422 Query: 1599 cagtatcagaggctgtgacaccttcagttgattcaagcactcaaacagaagtgaaagggg 1658 | |||||| | |||||| |||| || ||||||| |||| ||| |||| ||| |||| | Sbjct: 1423 ctgtatcacaagctgtggtacctacaattgattcgagcattcagacaggagtcaaagatg 1482 Query: 1659 cactcagaagagtagagatgaagagcaaggaatcagcatatcaagcatggttagggtact 1718 ||||| ||||||| |||| ||||||||||||||||| || || |||||| ||||||||| Sbjct: 1483 cactcggaagagtggagacaaagagcaaggaatcagcctaccaggcatggctagggtact 1542 Query: 1719 acaactcaaacaagaccattggtgggaacaagtccagacttgttagtctcggcgaagagt 1778 |||||||||||||| | ||| || | |||| |||||||||||||| |||| ||||||| Sbjct: 1543 acaactcaaacaaggctattagtcgagacaaatccagacttgttaggctcgcagaagagt 1602 Query: 1779 tcagccggagcatggggcttgcagccccaccagccatacccaagctcattcttcggaaga 1838 |||||| ||||||||| |||||| || || ||||||||||| ||||||||||| || | Sbjct: 1603 tcagccagagcatgggtcttgcaattccgcctgccatacccaaactcattcttcgaaaaa 1662 Query: 1839 tgggtcttagcaaagttcctgg 1860 |||| |||| ||| |||||||| Sbjct: 1663 tgggccttaacaatgttcctgg 1684 Score = 228 bits (115), Expect = 7e-56 Identities = 238/279 (85%) Strand = Plus / Plus Query: 388 ggaagggaaggctttgcaattggatgcggagaaggtcggtggcgaggcgggaggcgtgga 447 ||||||||||||| || | |||||||||| || | || || ||||| ||||||||||| Sbjct: 230 ggaagggaaggctatggagttggatgcggggatgagcgctgccgaggtgggaggcgtggt 289 Query: 448 cggctcctacctcagcgagacacggtttgatcagtgtgctatttctgaattgtcactgaa 507 ||||| | |||||||||||||| |||||||| ||| || ||||| |||||| |||| Sbjct: 290 tggctcgcatctcagcgagacacgatttgatcaatgtcctgtttctccgttgtcattgaa 349 Query: 508 aggcgtcaaagatgctggatatggaaggatgacccaggttcaggaggcaactctaccagt 567 || |||||||||||||||||| || |||||||||||| |||||||||||||| ||| | Sbjct: 350 agcaatcaaagatgctggatatgaaaagatgacccaggtgcaggaggcaactctgccaat 409 Query: 568 aatccttcaaggcaaagatgttcttgcgaaagcgaagacaggaacaggaaaaaccgttgc 627 |||||||||||| ||||||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 410 aatccttcaaggtgaagatgttcttgcaaaagcaaagacagggacaggaaaaactgttgc 469 Query: 628 ctttttgctgccagccattgaggttctctctaaattacc 666 ||||||||| ||||||||||| ||||||||| |||||| Sbjct: 470 ctttttgcttccagccattgaacttctctctacattacc 508
>ref|NM_001050125.1| Oryza sativa (japonica cultivar-group) Os01g0618400 (Os01g0618400) mRNA, complete cds Length = 2322 Score = 954 bits (481), Expect = 0.0 Identities = 1008/1181 (85%), Gaps = 2/1181 (0%) Strand = Plus / Plus Query: 699 taaatttgcttgtgatgtgccctactagagagcttgcaaaccaagtcgctgttgaggcca 758 |||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 674 taaatttgctggtgatgtgccctactagggagcttgcaatccaagtggctgttgaggcca 733 Query: 759 aaaagcttctcaagtatcatcgcttgctaggtgttcaggttgtaattggtggcacaagaa 818 | || |||||||||||||| |||| ||| || || || |||||||| ||||||||| || Sbjct: 734 agaaacttctcaagtatcaccgctcgctgggggtgcaagttgtaatcggtggcacacgat 793 Query: 819 taactctagagcaacgaaacatgcaggctaacccgtgtcagattcttgttgctacacctg 878 |||| | ||||||||||| |||||| |||||||| || |||||||||||||||||||||| Sbjct: 794 taacccaagagcaacgaagcatgcaagctaacccatgccagattcttgttgctacacctg 853 Query: 879 gaaggcttaaggatcatcttgagaacacacctggtttttctactcggctaaaaggggtga 938 |||||||||| || ||| ||||||||||||||||||||||||| || |||||||| |||| Sbjct: 854 gaaggcttaaagaccatgttgagaacacacctggtttttctacccgactaaaaggtgtga 913 Query: 939 aggttcttgttcttgatgaagctgaccgcttactggatatgggattcagaagagatattg 998 ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||| Sbjct: 914 aggttcttgttcttgatgaagctgatcgcctgctggatatgggattcagaagagacattg 973 Query: 999 aaaaaattatggctgccactcctaaagaccgtcagacgctgctgttttctgctactgttc 1058 | | ||| || ||| || ||||||||| || ||||| |||| |||||||||||||| | Sbjct: 974 agagaataattgcttccgttcctaaagagcgacagacattgctattttctgctactgtgc 1033 Query: 1059 cagaagaggtccgtcaaatctctcatgtagcaatgaggaaggactataggttcattaaca 1118 |||| |||||||| ||||| |||||| | ||||||| |||| | |||| ||||||||||| Sbjct: 1034 cagaggaggtccgccaaatttctcatattgcaatgaagaagaattataagttcattaaca 1093 Query: 1119 ctgttaaagagggtgacgaggagacacattcacaggttagccagatgtatatgattgcac 1178 ||||||| || ||||| |||||||||||| ||||||| || ||||||| ||||| || | Sbjct: 1094 ctgttaaggatggtgatgaggagacacatgcacaggtgagtcagatgttcatgatcgcgc 1153 Query: 1179 cacttgatctgcacttctctatattatatgatgtactgaagaagcatgtcactgaggatg 1238 |||| ||||||||||||||||| |||||||||||| ||||||||||||| | ||||||| Sbjct: 1154 cactagatctgcacttctctatcttatatgatgtattgaagaagcatgttgcagaggatg 1213 Query: 1239 cggactacaaagtgattatattctgtactacagcaatggtcacaaaacttgttgctgaag 1298 | ||||||||||||||||||||||| ||||| || ||||| || |||||||| |||||| Sbjct: 1214 cagactacaaagtgattatattctgcactactgcgatggttaccaaacttgtcgctgaaa 1273 Query: 1299 ttctctctcagctgaatctgaatataagagagattcattccagaaagtcacaatctgcaa 1358 |||| || || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1274 ttctttcccaactgagactgaatataagagagattcattccagaaagtcacaatctgcca 1333 Query: 1359 gaactaaggtgtcggatgaattcagaaggtcaaagggtgtgatattagttagttccgatg 1418 |||||||||| || ||||||||||| | ||||| |||| ||||||| |||||||| |||| Sbjct: 1334 gaactaaggtctcagatgaattcaggaagtcaaggggtctgatattggttagttctgatg 1393 Query: 1419 tatctgctcgtggtgttgattatcctgacgtcaccctcgtcatacaggttgggattcctt 1478 ||||||| || || || ||||||||||| |||||||| ||||||||||||||| | || Sbjct: 1394 tatctgcccgcggcgtggattatcctgatgtcacccttgtcatacaggttggggtgccag 1453 Query: 1479 ctggtagagagcagtatatacatagaattggtaggacaggacggaaaggcaaggaagggc 1538 ||| |||| |||| |||||||||||| ||||||| || |||||||| || |||||||||| Sbjct: 1454 ctgatagacagcaatatatacatagacttggtagaactggacggaagggaaaggaagggc 1513 Query: 1539 agggcctcttactgttggctccctggga-aagtcattttcttaccagcgtgaaagatctg 1597 | ||||| |||||||||||||| ||||| |||| | ||||||| ||| | || ||| || Sbjct: 1514 aaggcctattactgttggctccatgggagaagt-actttcttagtagcattaaggatttg 1572 Query: 1598 tcagtatcagaggctgtgacaccttcagttgattcaagcactcaaacagaagtgaaaggg 1657 ||| ||||||||||| | |||||| ||||||||||||||||| ||| ||| |||| Sbjct: 1573 tcaatatcagaggctacggtaccttctgttgattcaagcactcagacaatagtcaaagac 1632 Query: 1658 gcactcagaagagtagagatgaagagcaaggaatcagcatatcaagcatggttagggtac 1717 ||| || | | ||| ||||||| ||||||||| | || ||||||||||||||||| ||| Sbjct: 1633 gcagtccggaaagttgagatgaggagcaaggagtgtgcctatcaagcatggttaggatac 1692 Query: 1718 tacaactcaaacaagaccattggtgggaacaagtccagacttgttagtctcggcgaagag 1777 |||||||| |||||||||||||| | | || ||||||||||||| |||| |||||| Sbjct: 1693 tacaactctaacaagaccattggccgagaaaaatccagacttgttaagctcgcagaagag 1752 Query: 1778 ttcagccggagcatggggcttgcagccccaccagccatacccaagctcattcttcggaag 1837 ||||||| ||||||| |||| ||| || ||||| |||||||||| |||||||| ||| Sbjct: 1753 ttcagccaaagcatggagctttcagttccgccagctatacccaagcaaattcttcgaaag 1812 Query: 1838 atgggtcttagcaaagttcctggctttcgatctacataacc 1878 ||||| |||| ||| |||||||| | ||||||||||||| Sbjct: 1813 atgggacttaacaatgttcctgggctgagatctacataacc 1853 Score = 274 bits (138), Expect = 1e-69 Identities = 237/270 (87%) Strand = Plus / Plus Query: 388 ggaagggaaggctttgcaattggatgcggagaaggtcggtggcgaggcgggaggcgtgga 447 ||||||| ||||| | |||| ||||||| |||| ||||| |||| ||||||||||||| Sbjct: 363 ggaaggggaggctccggaattcgatgcggcgaagagcggtgacgagtcgggaggcgtgga 422 Query: 448 cggctcctacctcagcgagacacggtttgatcagtgtgctatttctgaattgtcactgaa 507 ||||| ||||||||||| ||| |||||||||| || |||||||| ||||||||||| Sbjct: 423 tggctcgtacctcagcgacacaaggtttgatcaatgcactatttctccgttgtcactgaa 482 Query: 508 aggcgtcaaagatgctggatatggaaggatgacccaggttcaggaggcaactctaccagt 567 || ||||||||||||||| |||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 483 agccgtcaaagatgctgggtatgaaaggatgacccaggtgcaggaggcaactctgccagt 542 Query: 568 aatccttcaaggcaaagatgttcttgcgaaagcgaagacaggaacaggaaaaaccgttgc 627 |||||||||||| |||||||||||||| ||||| ||||||||||| || ||||| ||||| Sbjct: 543 aatccttcaaggtaaagatgttcttgcaaaagcaaagacaggaactgggaaaactgttgc 602 Query: 628 ctttttgctgccagccattgaggttctctc 657 ||||||||| ||||||||||| |||||||| Sbjct: 603 ctttttgcttccagccattgaagttctctc 632 Score = 44.1 bits (22), Expect = 2.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 222 ccctggccgccgccaaggtcgacatcggcgacgtcgtc 259 ||||| ||||||||||||||||| ||| ||||| |||| Sbjct: 182 ccctgaccgccgccaaggtcgacgtcgccgacgccgtc 219 Score = 42.1 bits (21), Expect = 8.7 Identities = 78/97 (80%) Strand = Plus / Plus Query: 88 ccactcaccggagatggccggcggtgatattctcctccgtacccacggcggtatccccgt 147 |||||| ||||||||||||| ||| || | |||||||| ||||| |||| ||||||| Sbjct: 54 ccactcgccggagatggccgccggcgacctcctcctccgcacccagagcggcctccccgt 113 Query: 148 cctcgtcagggcctccccttgcagcctccgcctccgc 184 |||| ||||||| ||| || ||||| |||||||| Sbjct: 114 gctcgcaagggccttccccagctgcctctgcctccgc 150
>dbj|AK067570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110L15, full insert sequence Length = 2325 Score = 954 bits (481), Expect = 0.0 Identities = 1008/1181 (85%), Gaps = 2/1181 (0%) Strand = Plus / Plus Query: 699 taaatttgcttgtgatgtgccctactagagagcttgcaaaccaagtcgctgttgaggcca 758 |||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 675 taaatttgctggtgatgtgccctactagggagcttgcaatccaagtggctgttgaggcca 734 Query: 759 aaaagcttctcaagtatcatcgcttgctaggtgttcaggttgtaattggtggcacaagaa 818 | || |||||||||||||| |||| ||| || || || |||||||| ||||||||| || Sbjct: 735 agaaacttctcaagtatcaccgctcgctgggggtgcaagttgtaatcggtggcacacgat 794 Query: 819 taactctagagcaacgaaacatgcaggctaacccgtgtcagattcttgttgctacacctg 878 |||| | ||||||||||| |||||| |||||||| || |||||||||||||||||||||| Sbjct: 795 taacccaagagcaacgaagcatgcaagctaacccatgccagattcttgttgctacacctg 854 Query: 879 gaaggcttaaggatcatcttgagaacacacctggtttttctactcggctaaaaggggtga 938 |||||||||| || ||| ||||||||||||||||||||||||| || |||||||| |||| Sbjct: 855 gaaggcttaaagaccatgttgagaacacacctggtttttctacccgactaaaaggtgtga 914 Query: 939 aggttcttgttcttgatgaagctgaccgcttactggatatgggattcagaagagatattg 998 ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||| Sbjct: 915 aggttcttgttcttgatgaagctgatcgcctgctggatatgggattcagaagagacattg 974 Query: 999 aaaaaattatggctgccactcctaaagaccgtcagacgctgctgttttctgctactgttc 1058 | | ||| || ||| || ||||||||| || ||||| |||| |||||||||||||| | Sbjct: 975 agagaataattgcttccgttcctaaagagcgacagacattgctattttctgctactgtgc 1034 Query: 1059 cagaagaggtccgtcaaatctctcatgtagcaatgaggaaggactataggttcattaaca 1118 |||| |||||||| ||||| |||||| | ||||||| |||| | |||| ||||||||||| Sbjct: 1035 cagaggaggtccgccaaatttctcatattgcaatgaagaagaattataagttcattaaca 1094 Query: 1119 ctgttaaagagggtgacgaggagacacattcacaggttagccagatgtatatgattgcac 1178 ||||||| || ||||| |||||||||||| ||||||| || ||||||| ||||| || | Sbjct: 1095 ctgttaaggatggtgatgaggagacacatgcacaggtgagtcagatgttcatgatcgcgc 1154 Query: 1179 cacttgatctgcacttctctatattatatgatgtactgaagaagcatgtcactgaggatg 1238 |||| ||||||||||||||||| |||||||||||| ||||||||||||| | ||||||| Sbjct: 1155 cactagatctgcacttctctatcttatatgatgtattgaagaagcatgttgcagaggatg 1214 Query: 1239 cggactacaaagtgattatattctgtactacagcaatggtcacaaaacttgttgctgaag 1298 | ||||||||||||||||||||||| ||||| || ||||| || |||||||| |||||| Sbjct: 1215 cagactacaaagtgattatattctgcactactgcgatggttaccaaacttgtcgctgaaa 1274 Query: 1299 ttctctctcagctgaatctgaatataagagagattcattccagaaagtcacaatctgcaa 1358 |||| || || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1275 ttctttcccaactgagactgaatataagagagattcattccagaaagtcacaatctgcca 1334 Query: 1359 gaactaaggtgtcggatgaattcagaaggtcaaagggtgtgatattagttagttccgatg 1418 |||||||||| || ||||||||||| | ||||| |||| ||||||| |||||||| |||| Sbjct: 1335 gaactaaggtctcagatgaattcaggaagtcaaggggtctgatattggttagttctgatg 1394 Query: 1419 tatctgctcgtggtgttgattatcctgacgtcaccctcgtcatacaggttgggattcctt 1478 ||||||| || || || ||||||||||| |||||||| ||||||||||||||| | || Sbjct: 1395 tatctgcccgcggcgtggattatcctgatgtcacccttgtcatacaggttggggtgccag 1454 Query: 1479 ctggtagagagcagtatatacatagaattggtaggacaggacggaaaggcaaggaagggc 1538 ||| |||| |||| |||||||||||| ||||||| || |||||||| || |||||||||| Sbjct: 1455 ctgatagacagcaatatatacatagacttggtagaactggacggaagggaaaggaagggc 1514 Query: 1539 agggcctcttactgttggctccctggga-aagtcattttcttaccagcgtgaaagatctg 1597 | ||||| |||||||||||||| ||||| |||| | ||||||| ||| | || ||| || Sbjct: 1515 aaggcctattactgttggctccatgggagaagt-actttcttagtagcattaaggatttg 1573 Query: 1598 tcagtatcagaggctgtgacaccttcagttgattcaagcactcaaacagaagtgaaaggg 1657 ||| ||||||||||| | |||||| ||||||||||||||||| ||| ||| |||| Sbjct: 1574 tcaatatcagaggctacggtaccttctgttgattcaagcactcagacaatagtcaaagac 1633 Query: 1658 gcactcagaagagtagagatgaagagcaaggaatcagcatatcaagcatggttagggtac 1717 ||| || | | ||| ||||||| ||||||||| | || ||||||||||||||||| ||| Sbjct: 1634 gcagtccggaaagttgagatgaggagcaaggagtgtgcctatcaagcatggttaggatac 1693 Query: 1718 tacaactcaaacaagaccattggtgggaacaagtccagacttgttagtctcggcgaagag 1777 |||||||| |||||||||||||| | | || ||||||||||||| |||| |||||| Sbjct: 1694 tacaactctaacaagaccattggccgagaaaaatccagacttgttaagctcgcagaagag 1753 Query: 1778 ttcagccggagcatggggcttgcagccccaccagccatacccaagctcattcttcggaag 1837 ||||||| ||||||| |||| ||| || ||||| |||||||||| |||||||| ||| Sbjct: 1754 ttcagccaaagcatggagctttcagttccgccagctatacccaagcaaattcttcgaaag 1813 Query: 1838 atgggtcttagcaaagttcctggctttcgatctacataacc 1878 ||||| |||| ||| |||||||| | ||||||||||||| Sbjct: 1814 atgggacttaacaatgttcctgggctgagatctacataacc 1854 Score = 274 bits (138), Expect = 1e-69 Identities = 237/270 (87%) Strand = Plus / Plus Query: 388 ggaagggaaggctttgcaattggatgcggagaaggtcggtggcgaggcgggaggcgtgga 447 ||||||| ||||| | |||| ||||||| |||| ||||| |||| ||||||||||||| Sbjct: 364 ggaaggggaggctccggaattcgatgcggcgaagagcggtgacgagtcgggaggcgtgga 423 Query: 448 cggctcctacctcagcgagacacggtttgatcagtgtgctatttctgaattgtcactgaa 507 ||||| ||||||||||| ||| |||||||||| || |||||||| ||||||||||| Sbjct: 424 tggctcgtacctcagcgacacaaggtttgatcaatgcactatttctccgttgtcactgaa 483 Query: 508 aggcgtcaaagatgctggatatggaaggatgacccaggttcaggaggcaactctaccagt 567 || ||||||||||||||| |||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 484 agccgtcaaagatgctgggtatgaaaggatgacccaggtgcaggaggcaactctgccagt 543 Query: 568 aatccttcaaggcaaagatgttcttgcgaaagcgaagacaggaacaggaaaaaccgttgc 627 |||||||||||| |||||||||||||| ||||| ||||||||||| || ||||| ||||| Sbjct: 544 aatccttcaaggtaaagatgttcttgcaaaagcaaagacaggaactgggaaaactgttgc 603 Query: 628 ctttttgctgccagccattgaggttctctc 657 ||||||||| ||||||||||| |||||||| Sbjct: 604 ctttttgcttccagccattgaagttctctc 633 Score = 44.1 bits (22), Expect = 2.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 222 ccctggccgccgccaaggtcgacatcggcgacgtcgtc 259 ||||| ||||||||||||||||| ||| ||||| |||| Sbjct: 183 ccctgaccgccgccaaggtcgacgtcgccgacgccgtc 220 Score = 42.1 bits (21), Expect = 8.7 Identities = 78/97 (80%) Strand = Plus / Plus Query: 88 ccactcaccggagatggccggcggtgatattctcctccgtacccacggcggtatccccgt 147 |||||| ||||||||||||| ||| || | |||||||| ||||| |||| ||||||| Sbjct: 55 ccactcgccggagatggccgccggcgacctcctcctccgcacccagagcggcctccccgt 114 Query: 148 cctcgtcagggcctccccttgcagcctccgcctccgc 184 |||| ||||||| ||| || ||||| |||||||| Sbjct: 115 gctcgcaagggccttccccagctgcctctgcctccgc 151
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 266 bits (134), Expect = 3e-67 Identities = 197/218 (90%) Strand = Plus / Plus Query: 1250 gtgattatattctgtactacagcaatggtcacaaaacttgttgctgaagttctctctcag 1309 |||||| ||||||||||||| ||||||||||| |||||||||||||||||||| || ||| Sbjct: 24600406 gtgattgtattctgtactactgcaatggtcaccaaacttgttgctgaagttctttcccag 24600465 Query: 1310 ctgaatctgaatataagagagattcattccagaaagtcacaatctgcaagaactaaggtg 1369 ||||| ||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 24600466 ctgaaactgaatataagagagatccattcgagaaagtcgcaatcagcaagaactaaggtc 24600525 Query: 1370 tcggatgaattcagaaggtcaaagggtgtgatattagttagttccgatgtatctgctcgt 1429 || |||||||| || | ||||||||| |||||||||| ||||| ||||||||||||||| Sbjct: 24600526 tcagatgaatttaggaaatcaaagggtctgatattagtgagttctgatgtatctgctcgt 24600585 Query: 1430 ggtgttgattatcctgacgtcaccctcgtcatacaggt 1467 ||||||||||||||||| |||||||| ||||||||||| Sbjct: 24600586 ggtgttgattatcctgatgtcacccttgtcatacaggt 24600623 Score = 238 bits (120), Expect = 7e-59 Identities = 189/212 (89%) Strand = Plus / Plus Query: 857 cagattcttgttgctacacctggaaggcttaaggatcatcttgagaacacacctggtttt 916 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 24599754 cagattcttgttgctacaccgggaaggcttaaggatcatcttgagaatacacctggtttt 24599813 Query: 917 tctactcggctaaaaggggtgaaggttcttgttcttgatgaagctgaccgcttactggat 976 || | || | ||||||||||| ||||||||||||||||||||||||||| || ||||| Sbjct: 24599814 tccaaccgaattaaaggggtgaaagttcttgttcttgatgaagctgaccgcctattggat 24599873 Query: 977 atgggattcagaagagatattgaaaaaattatggctgccactcctaaagaccgtcagacg 1036 |||||||| |||||||| ||||| |||||||| ||| || ||||||||| || ||||| Sbjct: 24599874 atgggatttagaagagacattgagaaaattattgctttcattcctaaagaacgacagaca 24599933 Query: 1037 ctgctgttttctgctactgttccagaagaggt 1068 || || |||||||||||||||||||||||||| Sbjct: 24599934 cttcttttttctgctactgttccagaagaggt 24599965 Score = 230 bits (116), Expect = 2e-56 Identities = 188/212 (88%) Strand = Plus / Plus Query: 857 cagattcttgttgctacacctggaaggcttaaggatcatcttgagaacacacctggtttt 916 |||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 24595868 cagattcttgttgctacacctggaaggcttaaagaccatgttgagaacacacctggtttt 24595927 Query: 917 tctactcggctaaaaggggtgaaggttcttgttcttgatgaagctgaccgcttactggat 976 ||||| || |||||||| ||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 24595928 tctacccgactaaaaggtgtgaaggttcttgttcttgatgaagctgatcgcctgctggat 24595987 Query: 977 atgggattcagaagagatattgaaaaaattatggctgccactcctaaagaccgtcagacg 1036 ||||||||||||||||| ||||| | ||| || ||| || ||||||||| || ||||| Sbjct: 24595988 atgggattcagaagagacattgagagaataattgcttccgttcctaaagagcgacagaca 24596047 Query: 1037 ctgctgttttctgctactgttccagaagaggt 1068 |||| |||||||||||||| ||||| ||||| Sbjct: 24596048 ttgctattttctgctactgtgccagaggaggt 24596079 Score = 218 bits (110), Expect = 7e-53 Identities = 191/218 (87%) Strand = Plus / Plus Query: 1250 gtgattatattctgtactacagcaatggtcacaaaacttgttgctgaagttctctctcag 1309 |||||||||||||| ||||| || ||||| || |||||||| |||||| |||| || || Sbjct: 24596500 gtgattatattctgcactactgcgatggttaccaaacttgtcgctgaaattctttcccaa 24596559 Query: 1310 ctgaatctgaatataagagagattcattccagaaagtcacaatctgcaagaactaaggtg 1369 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 24596560 ctgagactgaatataagagagattcattccagaaagtcacaatctgccagaactaaggtc 24596619 Query: 1370 tcggatgaattcagaaggtcaaagggtgtgatattagttagttccgatgtatctgctcgt 1429 || ||||||||||| | ||||| |||| ||||||| |||||||| ||||||||||| || Sbjct: 24596620 tcagatgaattcaggaagtcaaggggtctgatattggttagttctgatgtatctgcccgc 24596679 Query: 1430 ggtgttgattatcctgacgtcaccctcgtcatacaggt 1467 || || ||||||||||| |||||||| ||||||||||| Sbjct: 24596680 ggcgtggattatcctgatgtcacccttgtcatacaggt 24596717 Score = 157 bits (79), Expect = 2e-34 Identities = 172/203 (84%) Strand = Plus / Plus Query: 1658 gcactcagaagagtagagatgaagagcaaggaatcagcatatcaagcatggttagggtac 1717 |||||| ||||||| |||| ||||||||||||||||| || || |||||| |||||||| Sbjct: 24601023 gcactcggaagagtggagacaaagagcaaggaatcagcctaccaggcatggctagggtac 24601082 Query: 1718 tacaactcaaacaagaccattggtgggaacaagtccagacttgttagtctcggcgaagag 1777 ||||||||||||||| | ||| || | |||| |||||||||||||| |||| |||||| Sbjct: 24601083 tacaactcaaacaaggctattagtcgagacaaatccagacttgttaggctcgcagaagag 24601142 Query: 1778 ttcagccggagcatggggcttgcagccccaccagccatacccaagctcattcttcggaag 1837 ||||||| ||||||||| |||||| || || ||||||||||| ||||||||||| || Sbjct: 24601143 ttcagccagagcatgggtcttgcaattccgcctgccatacccaaactcattcttcgaaaa 24601202 Query: 1838 atgggtcttagcaaagttcctgg 1860 ||||| |||| ||| |||||||| Sbjct: 24601203 atgggccttaacaatgttcctgg 24601225 Score = 155 bits (78), Expect = 8e-34 Identities = 135/154 (87%) Strand = Plus / Plus Query: 699 taaatttgcttgtgatgtgccctactagagagcttgcaaaccaagtcgctgttgaggcca 758 |||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 24595626 taaatttgctggtgatgtgccctactagggagcttgcaatccaagtggctgttgaggcca 24595685 Query: 759 aaaagcttctcaagtatcatcgcttgctaggtgttcaggttgtaattggtggcacaagaa 818 | || |||||||||||||| |||| ||| || || || |||||||| ||||||||| || Sbjct: 24595686 agaaacttctcaagtatcaccgctcgctgggggtgcaagttgtaatcggtggcacacgat 24595745 Query: 819 taactctagagcaacgaaacatgcaggctaaccc 852 |||| | ||||||||||| |||||| |||||||| Sbjct: 24595746 taacccaagagcaacgaagcatgcaagctaaccc 24595779 Score = 131 bits (66), Expect = 1e-26 Identities = 171/206 (83%) Strand = Plus / Plus Query: 1673 gagatgaagagcaaggaatcagcatatcaagcatggttagggtactacaactcaaacaag 1732 ||||||| ||||||||| | || ||||||||||||||||| ||||||||||| |||||| Sbjct: 24597246 gagatgaggagcaaggagtgtgcctatcaagcatggttaggatactacaactctaacaag 24597305 Query: 1733 accattggtgggaacaagtccagacttgttagtctcggcgaagagttcagccggagcatg 1792 |||||||| | | || ||||||||||||| |||| ||||||||||||| |||||| Sbjct: 24597306 accattggccgagaaaaatccagacttgttaagctcgcagaagagttcagccaaagcatg 24597365 Query: 1793 gggcttgcagccccaccagccatacccaagctcattcttcggaagatgggtcttagcaaa 1852 | |||| ||| || ||||| |||||||||| |||||||| |||||||| |||| ||| Sbjct: 24597366 gagctttcagttccgccagctatacccaagcaaattcttcgaaagatgggacttaacaat 24597425 Query: 1853 gttcctggctttcgatctacataacc 1878 |||||||| | ||||||||||||| Sbjct: 24597426 gttcctgggctgagatctacataacc 24597451 Score = 129 bits (65), Expect = 5e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 471 ggtttgatcagtgtgctatttctgaattgtcactgaaaggcgtcaaagatgctggatatg 530 |||||||||| || |||||||| ||||||||||||| ||||||||||||||| |||| Sbjct: 24595206 ggtttgatcaatgcactatttctccgttgtcactgaaagccgtcaaagatgctgggtatg 24595265 Query: 531 gaaggatgacccaggttcaggaggcaactctaccagtaatccttcaagg 579 ||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 24595266 aaaggatgacccaggtgcaggaggcaactctgccagtaatccttcaagg 24595314 Score = 129 bits (65), Expect = 5e-26 Identities = 125/145 (86%) Strand = Plus / Plus Query: 699 taaatttgcttgtgatgtgccctactagagagcttgcaaaccaagtcgctgttgaggcca 758 |||||||||||||||| ||||| || || ||||| ||||||||||| |||| |||||||| Sbjct: 24599515 taaatttgcttgtgatatgccccacaagggagctagcaaaccaagtggctgctgaggcca 24599574 Query: 759 aaaagcttctcaagtatcatcgcttgctaggtgttcaggttgtaattggtggcacaagaa 818 |||||||||||||||||||||| || ||||| |||||||||||||| ||||||| | Sbjct: 24599575 ggaagcttctcaagtatcatcgctcactgggtgtgcaggttgtaattggcggcacaaaat 24599634 Query: 819 taactctagagcaacgaaacatgca 843 || ||| ||| ||||||| |||||| Sbjct: 24599635 tacctcaagaacaacgaagcatgca 24599659 Score = 103 bits (52), Expect = 3e-18 Identities = 135/160 (84%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 1483 tagagagcagtatatacatagaattggtaggacaggacggaaaggcaaggaagggcaggg 1542 |||| |||| |||||||||||| ||||||| || |||||||| || ||||||||||| || Sbjct: 24596925 tagacagcaatatatacatagacttggtagaactggacggaagggaaaggaagggcaagg 24596984 Query: 1543 cctcttactgttggctccctggga-aagtcattttcttaccagcgtgaaagatctgtcag 1601 ||| |||||||||||||| ||||| |||| | ||||||| ||| | || ||| ||||| Sbjct: 24596985 cctattactgttggctccatgggagaagt-actttcttagtagcattaaggatttgtcaa 24597043 Query: 1602 tatcagaggctgtgacaccttcagttgattcaagcactca 1641 ||||||||||| | |||||| ||||||||||||||||| Sbjct: 24597044 tatcagaggctacggtaccttctgttgattcaagcactca 24597083 Score = 99.6 bits (50), Expect = 4e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 1483 tagagagcagtatatacatagaattggtaggacaggacggaaaggcaaggaagggcaggg 1542 |||||| ||||||||||||||| ||||||| || |||||||||||||| || |||| || Sbjct: 24600710 tagagaacagtatatacatagacttggtagaactggacggaaaggcaaagatgggctagg 24600769 Query: 1543 cctcttactgttggctccctgggaaa 1568 ||||||||||||||||||||||||| Sbjct: 24600770 tctcttactgttggctccctgggaaa 24600795 Score = 97.6 bits (49), Expect = 2e-16 Identities = 88/101 (87%) Strand = Plus / Plus Query: 1151 caggttagccagatgtatatgattgcaccacttgatctgcacttctctatattatatgat 1210 ||||| || ||||||| ||||| || ||||| ||||||||||||||||| ||||||||| Sbjct: 24596328 caggtgagtcagatgttcatgatcgcgccactagatctgcacttctctatcttatatgat 24596387 Query: 1211 gtactgaagaagcatgtcactgaggatgcggactacaaagt 1251 ||| ||||||||||||| | |||||||| ||||||||||| Sbjct: 24596388 gtattgaagaagcatgttgcagaggatgcagactacaaagt 24596428 Score = 97.6 bits (49), Expect = 2e-16 Identities = 88/101 (87%) Strand = Plus / Plus Query: 1151 caggttagccagatgtatatgattgcaccacttgatctgcacttctctatattatatgat 1210 ||||| || |||||||| ||| ||||||||||||| ||||||||||||||||| || || Sbjct: 24600206 caggtaagtcagatgtacatggttgcaccacttgacctgcacttctctatattgtacaat 24600265 Query: 1211 gtactgaagaagcatgtcactgaggatgcggactacaaagt 1251 ||||||||||||||| || | || ||||| ||||||||||| Sbjct: 24600266 gtactgaagaagcatatcgcagaagatgcagactacaaagt 24600306 Score = 93.7 bits (47), Expect = 3e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 513 tcaaagatgctggatatggaaggatgacccaggttcaggaggcaactctaccagtaatcc 572 |||||||||||||||||| || |||||||||||| |||||||||||||| ||| |||||| Sbjct: 24599154 tcaaagatgctggatatgaaaagatgacccaggtgcaggaggcaactctgccaataatcc 24599213 Query: 573 ttcaagg 579 ||||||| Sbjct: 24599214 ttcaagg 24599220 Score = 87.7 bits (44), Expect = 2e-13 Identities = 80/92 (86%) Strand = Plus / Plus Query: 1065 aggtccgtcaaatctctcatgtagcaatgaggaaggactataggttcattaacactgtta 1124 ||||||| ||||| |||||| | ||||||| |||| | |||| ||||||||||||||||| Sbjct: 24596155 aggtccgccaaatttctcatattgcaatgaagaagaattataagttcattaacactgtta 24596214 Query: 1125 aagagggtgacgaggagacacattcacaggtt 1156 | || ||||| |||||||||||| |||||||| Sbjct: 24596215 aggatggtgatgaggagacacatgcacaggtt 24596246 Score = 81.8 bits (41), Expect = 1e-11 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1108 gttcattaacactgttaaagagggtgacgaggagacacattcacaggtt 1156 ||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 24600078 gttcattaatactgttaaagagggtgatgaggagacacattcacaggtt 24600126 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 582 aagatgttcttgcgaaagcgaagacaggaacaggaaaaaccgttgcctttttg 634 ||||||||||||| ||||| |||||||| ||||||||||| |||||||||||| Sbjct: 24599322 aagatgttcttgcaaaagcaaagacagggacaggaaaaactgttgcctttttg 24599374 Score = 67.9 bits (34), Expect = 2e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 581 aaagatgttcttgcgaaagcgaagacaggaacaggaaaaaccgttgcctttttg 634 |||||||||||||| ||||| ||||||||||| || ||||| |||||||||||| Sbjct: 24595419 aaagatgttcttgcaaaagcaaagacaggaactgggaaaactgttgcctttttg 24595472 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 388 ggaagggaaggctttgcaattggatgcggagaaggtcggtggcgaggcgggaggcgtgga 447 ||||||| ||||| | |||| ||||||| |||| ||||| |||| ||||||||||||| Sbjct: 24594654 ggaaggggaggctccggaattcgatgcggcgaagagcggtgacgagtcgggaggcgtgga 24594713 Query: 448 cggctcctacctcagcga 465 ||||| ||||||||||| Sbjct: 24594714 tggctcgtacctcagcga 24594731 Score = 52.0 bits (26), Expect = 0.009 Identities = 71/86 (82%) Strand = Plus / Plus Query: 388 ggaagggaaggctttgcaattggatgcggagaaggtcggtggcgaggcgggaggcgtgga 447 ||||||||||||| || | |||||||||| || | || || ||||| ||||||||||| Sbjct: 24598566 ggaagggaaggctatggagttggatgcggggatgagcgctgccgaggtgggaggcgtggt 24598625 Query: 448 cggctcctacctcagcgagacacggt 473 ||||| | |||||||||||||||| Sbjct: 24598626 tggctcgcatctcagcgagacacggt 24598651 Score = 46.1 bits (23), Expect = 0.56 Identities = 35/39 (89%) Strand = Plus / Minus Query: 943 tcttgttcttgatgaagctgaccgcttactggatatggg 981 ||||||||||||||| ||||||||| | || |||||||| Sbjct: 3715155 tcttgttcttgatgaggctgaccgcatgcttgatatggg 3715117 Score = 44.1 bits (22), Expect = 2.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 222 ccctggccgccgccaaggtcgacatcggcgacgtcgtc 259 ||||| ||||||||||||||||| ||| ||||| |||| Sbjct: 24594473 ccctgaccgccgccaaggtcgacgtcgccgacgccgtc 24594510 Score = 42.1 bits (21), Expect = 8.7 Identities = 78/97 (80%) Strand = Plus / Plus Query: 88 ccactcaccggagatggccggcggtgatattctcctccgtacccacggcggtatccccgt 147 |||||| ||||||||||||| ||| || | |||||||| ||||| |||| ||||||| Sbjct: 24594345 ccactcgccggagatggccgccggcgacctcctcctccgcacccagagcggcctccccgt 24594404 Query: 148 cctcgtcagggcctccccttgcagcctccgcctccgc 184 |||| ||||||| ||| || ||||| |||||||| Sbjct: 24594405 gctcgcaagggccttccccagctgcctctgcctccgc 24594441
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 266 bits (134), Expect = 3e-67 Identities = 197/218 (90%) Strand = Plus / Plus Query: 1250 gtgattatattctgtactacagcaatggtcacaaaacttgttgctgaagttctctctcag 1309 |||||| ||||||||||||| ||||||||||| |||||||||||||||||||| || ||| Sbjct: 26369 gtgattgtattctgtactactgcaatggtcaccaaacttgttgctgaagttctttcccag 26428 Query: 1310 ctgaatctgaatataagagagattcattccagaaagtcacaatctgcaagaactaaggtg 1369 ||||| ||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 26429 ctgaaactgaatataagagagatccattcgagaaagtcgcaatcagcaagaactaaggtc 26488 Query: 1370 tcggatgaattcagaaggtcaaagggtgtgatattagttagttccgatgtatctgctcgt 1429 || |||||||| || | ||||||||| |||||||||| ||||| ||||||||||||||| Sbjct: 26489 tcagatgaatttaggaaatcaaagggtctgatattagtgagttctgatgtatctgctcgt 26548 Query: 1430 ggtgttgattatcctgacgtcaccctcgtcatacaggt 1467 ||||||||||||||||| |||||||| ||||||||||| Sbjct: 26549 ggtgttgattatcctgatgtcacccttgtcatacaggt 26586 Score = 238 bits (120), Expect = 7e-59 Identities = 189/212 (89%) Strand = Plus / Plus Query: 857 cagattcttgttgctacacctggaaggcttaaggatcatcttgagaacacacctggtttt 916 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 25717 cagattcttgttgctacaccgggaaggcttaaggatcatcttgagaatacacctggtttt 25776 Query: 917 tctactcggctaaaaggggtgaaggttcttgttcttgatgaagctgaccgcttactggat 976 || | || | ||||||||||| ||||||||||||||||||||||||||| || ||||| Sbjct: 25777 tccaaccgaattaaaggggtgaaagttcttgttcttgatgaagctgaccgcctattggat 25836 Query: 977 atgggattcagaagagatattgaaaaaattatggctgccactcctaaagaccgtcagacg 1036 |||||||| |||||||| ||||| |||||||| ||| || ||||||||| || ||||| Sbjct: 25837 atgggatttagaagagacattgagaaaattattgctttcattcctaaagaacgacagaca 25896 Query: 1037 ctgctgttttctgctactgttccagaagaggt 1068 || || |||||||||||||||||||||||||| Sbjct: 25897 cttcttttttctgctactgttccagaagaggt 25928 Score = 230 bits (116), Expect = 2e-56 Identities = 188/212 (88%) Strand = Plus / Plus Query: 857 cagattcttgttgctacacctggaaggcttaaggatcatcttgagaacacacctggtttt 916 |||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 21831 cagattcttgttgctacacctggaaggcttaaagaccatgttgagaacacacctggtttt 21890 Query: 917 tctactcggctaaaaggggtgaaggttcttgttcttgatgaagctgaccgcttactggat 976 ||||| || |||||||| ||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 21891 tctacccgactaaaaggtgtgaaggttcttgttcttgatgaagctgatcgcctgctggat 21950 Query: 977 atgggattcagaagagatattgaaaaaattatggctgccactcctaaagaccgtcagacg 1036 ||||||||||||||||| ||||| | ||| || ||| || ||||||||| || ||||| Sbjct: 21951 atgggattcagaagagacattgagagaataattgcttccgttcctaaagagcgacagaca 22010 Query: 1037 ctgctgttttctgctactgttccagaagaggt 1068 |||| |||||||||||||| ||||| ||||| Sbjct: 22011 ttgctattttctgctactgtgccagaggaggt 22042 Score = 218 bits (110), Expect = 7e-53 Identities = 191/218 (87%) Strand = Plus / Plus Query: 1250 gtgattatattctgtactacagcaatggtcacaaaacttgttgctgaagttctctctcag 1309 |||||||||||||| ||||| || ||||| || |||||||| |||||| |||| || || Sbjct: 22463 gtgattatattctgcactactgcgatggttaccaaacttgtcgctgaaattctttcccaa 22522 Query: 1310 ctgaatctgaatataagagagattcattccagaaagtcacaatctgcaagaactaaggtg 1369 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 22523 ctgagactgaatataagagagattcattccagaaagtcacaatctgccagaactaaggtc 22582 Query: 1370 tcggatgaattcagaaggtcaaagggtgtgatattagttagttccgatgtatctgctcgt 1429 || ||||||||||| | ||||| |||| ||||||| |||||||| ||||||||||| || Sbjct: 22583 tcagatgaattcaggaagtcaaggggtctgatattggttagttctgatgtatctgcccgc 22642 Query: 1430 ggtgttgattatcctgacgtcaccctcgtcatacaggt 1467 || || ||||||||||| |||||||| ||||||||||| Sbjct: 22643 ggcgtggattatcctgatgtcacccttgtcatacaggt 22680 Score = 157 bits (79), Expect = 2e-34 Identities = 172/203 (84%) Strand = Plus / Plus Query: 1658 gcactcagaagagtagagatgaagagcaaggaatcagcatatcaagcatggttagggtac 1717 |||||| ||||||| |||| ||||||||||||||||| || || |||||| |||||||| Sbjct: 26986 gcactcggaagagtggagacaaagagcaaggaatcagcctaccaggcatggctagggtac 27045 Query: 1718 tacaactcaaacaagaccattggtgggaacaagtccagacttgttagtctcggcgaagag 1777 ||||||||||||||| | ||| || | |||| |||||||||||||| |||| |||||| Sbjct: 27046 tacaactcaaacaaggctattagtcgagacaaatccagacttgttaggctcgcagaagag 27105 Query: 1778 ttcagccggagcatggggcttgcagccccaccagccatacccaagctcattcttcggaag 1837 ||||||| ||||||||| |||||| || || ||||||||||| ||||||||||| || Sbjct: 27106 ttcagccagagcatgggtcttgcaattccgcctgccatacccaaactcattcttcgaaaa 27165 Query: 1838 atgggtcttagcaaagttcctgg 1860 ||||| |||| ||| |||||||| Sbjct: 27166 atgggccttaacaatgttcctgg 27188 Score = 155 bits (78), Expect = 8e-34 Identities = 135/154 (87%) Strand = Plus / Plus Query: 699 taaatttgcttgtgatgtgccctactagagagcttgcaaaccaagtcgctgttgaggcca 758 |||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 21589 taaatttgctggtgatgtgccctactagggagcttgcaatccaagtggctgttgaggcca 21648 Query: 759 aaaagcttctcaagtatcatcgcttgctaggtgttcaggttgtaattggtggcacaagaa 818 | || |||||||||||||| |||| ||| || || || |||||||| ||||||||| || Sbjct: 21649 agaaacttctcaagtatcaccgctcgctgggggtgcaagttgtaatcggtggcacacgat 21708 Query: 819 taactctagagcaacgaaacatgcaggctaaccc 852 |||| | ||||||||||| |||||| |||||||| Sbjct: 21709 taacccaagagcaacgaagcatgcaagctaaccc 21742 Score = 131 bits (66), Expect = 1e-26 Identities = 171/206 (83%) Strand = Plus / Plus Query: 1673 gagatgaagagcaaggaatcagcatatcaagcatggttagggtactacaactcaaacaag 1732 ||||||| ||||||||| | || ||||||||||||||||| ||||||||||| |||||| Sbjct: 23209 gagatgaggagcaaggagtgtgcctatcaagcatggttaggatactacaactctaacaag 23268 Query: 1733 accattggtgggaacaagtccagacttgttagtctcggcgaagagttcagccggagcatg 1792 |||||||| | | || ||||||||||||| |||| ||||||||||||| |||||| Sbjct: 23269 accattggccgagaaaaatccagacttgttaagctcgcagaagagttcagccaaagcatg 23328 Query: 1793 gggcttgcagccccaccagccatacccaagctcattcttcggaagatgggtcttagcaaa 1852 | |||| ||| || ||||| |||||||||| |||||||| |||||||| |||| ||| Sbjct: 23329 gagctttcagttccgccagctatacccaagcaaattcttcgaaagatgggacttaacaat 23388 Query: 1853 gttcctggctttcgatctacataacc 1878 |||||||| | ||||||||||||| Sbjct: 23389 gttcctgggctgagatctacataacc 23414 Score = 129 bits (65), Expect = 5e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 471 ggtttgatcagtgtgctatttctgaattgtcactgaaaggcgtcaaagatgctggatatg 530 |||||||||| || |||||||| ||||||||||||| ||||||||||||||| |||| Sbjct: 21169 ggtttgatcaatgcactatttctccgttgtcactgaaagccgtcaaagatgctgggtatg 21228 Query: 531 gaaggatgacccaggttcaggaggcaactctaccagtaatccttcaagg 579 ||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 21229 aaaggatgacccaggtgcaggaggcaactctgccagtaatccttcaagg 21277 Score = 129 bits (65), Expect = 5e-26 Identities = 125/145 (86%) Strand = Plus / Plus Query: 699 taaatttgcttgtgatgtgccctactagagagcttgcaaaccaagtcgctgttgaggcca 758 |||||||||||||||| ||||| || || ||||| ||||||||||| |||| |||||||| Sbjct: 25478 taaatttgcttgtgatatgccccacaagggagctagcaaaccaagtggctgctgaggcca 25537 Query: 759 aaaagcttctcaagtatcatcgcttgctaggtgttcaggttgtaattggtggcacaagaa 818 |||||||||||||||||||||| || ||||| |||||||||||||| ||||||| | Sbjct: 25538 ggaagcttctcaagtatcatcgctcactgggtgtgcaggttgtaattggcggcacaaaat 25597 Query: 819 taactctagagcaacgaaacatgca 843 || ||| ||| ||||||| |||||| Sbjct: 25598 tacctcaagaacaacgaagcatgca 25622 Score = 103 bits (52), Expect = 3e-18 Identities = 135/160 (84%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 1483 tagagagcagtatatacatagaattggtaggacaggacggaaaggcaaggaagggcaggg 1542 |||| |||| |||||||||||| ||||||| || |||||||| || ||||||||||| || Sbjct: 22888 tagacagcaatatatacatagacttggtagaactggacggaagggaaaggaagggcaagg 22947 Query: 1543 cctcttactgttggctccctggga-aagtcattttcttaccagcgtgaaagatctgtcag 1601 ||| |||||||||||||| ||||| |||| | ||||||| ||| | || ||| ||||| Sbjct: 22948 cctattactgttggctccatgggagaagt-actttcttagtagcattaaggatttgtcaa 23006 Query: 1602 tatcagaggctgtgacaccttcagttgattcaagcactca 1641 ||||||||||| | |||||| ||||||||||||||||| Sbjct: 23007 tatcagaggctacggtaccttctgttgattcaagcactca 23046 Score = 99.6 bits (50), Expect = 4e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 1483 tagagagcagtatatacatagaattggtaggacaggacggaaaggcaaggaagggcaggg 1542 |||||| ||||||||||||||| ||||||| || |||||||||||||| || |||| || Sbjct: 26673 tagagaacagtatatacatagacttggtagaactggacggaaaggcaaagatgggctagg 26732 Query: 1543 cctcttactgttggctccctgggaaa 1568 ||||||||||||||||||||||||| Sbjct: 26733 tctcttactgttggctccctgggaaa 26758 Score = 97.6 bits (49), Expect = 2e-16 Identities = 88/101 (87%) Strand = Plus / Plus Query: 1151 caggttagccagatgtatatgattgcaccacttgatctgcacttctctatattatatgat 1210 ||||| || ||||||| ||||| || ||||| ||||||||||||||||| ||||||||| Sbjct: 22291 caggtgagtcagatgttcatgatcgcgccactagatctgcacttctctatcttatatgat 22350 Query: 1211 gtactgaagaagcatgtcactgaggatgcggactacaaagt 1251 ||| ||||||||||||| | |||||||| ||||||||||| Sbjct: 22351 gtattgaagaagcatgttgcagaggatgcagactacaaagt 22391 Score = 97.6 bits (49), Expect = 2e-16 Identities = 88/101 (87%) Strand = Plus / Plus Query: 1151 caggttagccagatgtatatgattgcaccacttgatctgcacttctctatattatatgat 1210 ||||| || |||||||| ||| ||||||||||||| ||||||||||||||||| || || Sbjct: 26169 caggtaagtcagatgtacatggttgcaccacttgacctgcacttctctatattgtacaat 26228 Query: 1211 gtactgaagaagcatgtcactgaggatgcggactacaaagt 1251 ||||||||||||||| || | || ||||| ||||||||||| Sbjct: 26229 gtactgaagaagcatatcgcagaagatgcagactacaaagt 26269 Score = 93.7 bits (47), Expect = 3e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 513 tcaaagatgctggatatggaaggatgacccaggttcaggaggcaactctaccagtaatcc 572 |||||||||||||||||| || |||||||||||| |||||||||||||| ||| |||||| Sbjct: 25117 tcaaagatgctggatatgaaaagatgacccaggtgcaggaggcaactctgccaataatcc 25176 Query: 573 ttcaagg 579 ||||||| Sbjct: 25177 ttcaagg 25183 Score = 87.7 bits (44), Expect = 2e-13 Identities = 80/92 (86%) Strand = Plus / Plus Query: 1065 aggtccgtcaaatctctcatgtagcaatgaggaaggactataggttcattaacactgtta 1124 ||||||| ||||| |||||| | ||||||| |||| | |||| ||||||||||||||||| Sbjct: 22118 aggtccgccaaatttctcatattgcaatgaagaagaattataagttcattaacactgtta 22177 Query: 1125 aagagggtgacgaggagacacattcacaggtt 1156 | || ||||| |||||||||||| |||||||| Sbjct: 22178 aggatggtgatgaggagacacatgcacaggtt 22209 Score = 81.8 bits (41), Expect = 1e-11 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1108 gttcattaacactgttaaagagggtgacgaggagacacattcacaggtt 1156 ||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 26041 gttcattaatactgttaaagagggtgatgaggagacacattcacaggtt 26089 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 582 aagatgttcttgcgaaagcgaagacaggaacaggaaaaaccgttgcctttttg 634 ||||||||||||| ||||| |||||||| ||||||||||| |||||||||||| Sbjct: 25285 aagatgttcttgcaaaagcaaagacagggacaggaaaaactgttgcctttttg 25337 Score = 67.9 bits (34), Expect = 2e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 581 aaagatgttcttgcgaaagcgaagacaggaacaggaaaaaccgttgcctttttg 634 |||||||||||||| ||||| ||||||||||| || ||||| |||||||||||| Sbjct: 21382 aaagatgttcttgcaaaagcaaagacaggaactgggaaaactgttgcctttttg 21435 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 388 ggaagggaaggctttgcaattggatgcggagaaggtcggtggcgaggcgggaggcgtgga 447 ||||||| ||||| | |||| ||||||| |||| ||||| |||| ||||||||||||| Sbjct: 20617 ggaaggggaggctccggaattcgatgcggcgaagagcggtgacgagtcgggaggcgtgga 20676 Query: 448 cggctcctacctcagcga 465 ||||| ||||||||||| Sbjct: 20677 tggctcgtacctcagcga 20694 Score = 52.0 bits (26), Expect = 0.009 Identities = 71/86 (82%) Strand = Plus / Plus Query: 388 ggaagggaaggctttgcaattggatgcggagaaggtcggtggcgaggcgggaggcgtgga 447 ||||||||||||| || | |||||||||| || | || || ||||| ||||||||||| Sbjct: 24529 ggaagggaaggctatggagttggatgcggggatgagcgctgccgaggtgggaggcgtggt 24588 Query: 448 cggctcctacctcagcgagacacggt 473 ||||| | |||||||||||||||| Sbjct: 24589 tggctcgcatctcagcgagacacggt 24614 Score = 44.1 bits (22), Expect = 2.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 222 ccctggccgccgccaaggtcgacatcggcgacgtcgtc 259 ||||| ||||||||||||||||| ||| ||||| |||| Sbjct: 20436 ccctgaccgccgccaaggtcgacgtcgccgacgccgtc 20473 Score = 42.1 bits (21), Expect = 8.7 Identities = 78/97 (80%) Strand = Plus / Plus Query: 88 ccactcaccggagatggccggcggtgatattctcctccgtacccacggcggtatccccgt 147 |||||| ||||||||||||| ||| || | |||||||| ||||| |||| ||||||| Sbjct: 20308 ccactcgccggagatggccgccggcgacctcctcctccgcacccagagcggcctccccgt 20367 Query: 148 cctcgtcagggcctccccttgcagcctccgcctccgc 184 |||| ||||||| ||| || ||||| |||||||| Sbjct: 20368 gctcgcaagggccttccccagctgcctctgcctccgc 20404
>gb|AY110847.1| Zea mays CL37643_1 mRNA sequence Length = 620 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Minus Query: 1772 gaagagttcagccggagcatggggcttgcagccccaccagccatacccaagctcattctt 1831 ||||||||||| | |||||||||||| |||| ||| |||||||| ||||| | ||||| Sbjct: 485 gaagagttcagtcagagcatggggctcgcagtcccgccagccattcccaaacaaattcta 426 Query: 1832 cggaagatgggtcttagcaaagttcctgg 1860 ||||||||||| || ||||| |||||||| Sbjct: 425 cggaagatgggcctcagcaacgttcctgg 397 Score = 65.9 bits (33), Expect = 6e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 1673 gagatgaagagcaaggaatcagcatatcaagcatggttagggtactacaactc 1725 ||||||||||||||||||||||| || || |||||| | |||||||||||||| Sbjct: 584 gagatgaagagcaaggaatcagcctaccaggcatggctggggtactacaactc 532
>ref|NM_001064299.1| Oryza sativa (japonica cultivar-group) Os06g0526600 (Os06g0526600) mRNA, complete cds Length = 2778 Score = 71.9 bits (36), Expect = 1e-08 Identities = 114/140 (81%) Strand = Plus / Plus Query: 846 ctaacccgtgtcagattcttgttgctacacctggaaggcttaaggatcatcttgagaaca 905 ||||||| || |||||||| || |||||||| |||||||||||||||||| | ||||||| Sbjct: 1742 ctaacccttgccagattctagtagctacaccaggaaggcttaaggatcatatggagaaca 1801 Query: 906 cacctggtttttctactcggctaaaaggggtgaaggttcttgttcttgatgaagctgacc 965 | || || ||| ||||| | | | || || || || ||| ||||||||||||| || | Sbjct: 1802 ctccagggtttgctactagattgatgggtgtcaaagtccttattcttgatgaagcggatc 1861 Query: 966 gcttactggatatgggattc 985 ||||| | |||||||||||| Sbjct: 1862 gcttattagatatgggattc 1881 Score = 44.1 bits (22), Expect = 2.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1406 gttagttccgatgtatctgctcgtggtgttgattatcc 1443 ||||| ||||||||||||||| | || ||||||||||| Sbjct: 2236 gttagctccgatgtatctgctaggggcgttgattatcc 2273
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 65.9 bits (33), Expect = 6e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 857 cagattcttgttgctacacctggaaggcttaaggatcatcttgagaacacacctggtttt 916 |||||||| || |||||||| |||||||||||||||||| | |||||||| || || ||| Sbjct: 19172744 cagattctagtagctacaccaggaaggcttaaggatcatatggagaacactccagggttt 19172685 Query: 917 tctactcggctaaaaggggtgaaggttcttgttcttgatgaagctgaccgcttactggat 976 ||||| | | | || || || || ||| ||||||||||||| || |||||| | ||| Sbjct: 19172684 gctactagattgatgggtgtcaaagtccttattcttgatgaagcggatcgcttattagat 19172625 Query: 977 atgggattc 985 ||||||||| Sbjct: 19172624 atgggattc 19172616 Score = 44.1 bits (22), Expect = 2.2 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1406 gttagttccgatgtatctgctcgtggtgttgattatcc 1443 ||||| ||||||||||||||| | || ||||||||||| Sbjct: 19171938 gttagctccgatgtatctgctaggggcgttgattatcc 19171901
>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001B01 Length = 147585 Score = 65.9 bits (33), Expect = 6e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 857 cagattcttgttgctacacctggaaggcttaaggatcatcttgagaacacacctggtttt 916 |||||||| || |||||||| |||||||||||||||||| | |||||||| || || ||| Sbjct: 10508 cagattctagtagctacaccaggaaggcttaaggatcatatggagaacactccagggttt 10449 Query: 917 tctactcggctaaaaggggtgaaggttcttgttcttgatgaagctgaccgcttactggat 976 ||||| | | | || || || || ||| ||||||||||||| || |||||| | ||| Sbjct: 10448 gctactagattgatgggtgtcaaagtccttattcttgatgaagcggatcgcttattagat 10389 Query: 977 atgggattc 985 ||||||||| Sbjct: 10388 atgggattc 10380 Score = 44.1 bits (22), Expect = 2.2 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1406 gttagttccgatgtatctgctcgtggtgttgattatcc 1443 ||||| ||||||||||||||| | || ||||||||||| Sbjct: 9702 gttagctccgatgtatctgctaggggcgttgattatcc 9665
>dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0043B22 Length = 158857 Score = 65.9 bits (33), Expect = 6e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 857 cagattcttgttgctacacctggaaggcttaaggatcatcttgagaacacacctggtttt 916 |||||||| || |||||||| |||||||||||||||||| | |||||||| || || ||| Sbjct: 76229 cagattctagtagctacaccaggaaggcttaaggatcatatggagaacactccagggttt 76170 Query: 917 tctactcggctaaaaggggtgaaggttcttgttcttgatgaagctgaccgcttactggat 976 ||||| | | | || || || || ||| ||||||||||||| || |||||| | ||| Sbjct: 76169 gctactagattgatgggtgtcaaagtccttattcttgatgaagcggatcgcttattagat 76110 Query: 977 atgggattc 985 ||||||||| Sbjct: 76109 atgggattc 76101 Score = 44.1 bits (22), Expect = 2.2 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1406 gttagttccgatgtatctgctcgtggtgttgattatcc 1443 ||||| ||||||||||||||| | || ||||||||||| Sbjct: 75423 gttagctccgatgtatctgctaggggcgttgattatcc 75386
>ref|NM_120948.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding (AT5G08610) mRNA, complete cds Length = 2755 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 1487 gagcagtatatacatagaattggtaggacaggacggaaaggcaaggaagggcagggcctc 1546 |||||||||||||||||| |||| || || || |||||||| ||||||||| | || || Sbjct: 2210 gagcagtatatacatagacttggcagaaccgggcggaaagggaaggaaggggaaggagtc 2269 Query: 1547 ttactgttggctccctgggaa 1567 ||| ||||||| || |||||| Sbjct: 2270 ttattgttggcaccatgggaa 2290 Score = 48.1 bits (24), Expect = 0.14 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1415 gatgtatctgctcgtggtgttgattatcctga 1446 |||||||||||||||||||| ||||| ||||| Sbjct: 2138 gatgtatctgctcgtggtgtggattaccctga 2169 Score = 44.1 bits (22), Expect = 2.2 Identities = 61/74 (82%) Strand = Plus / Plus Query: 575 caaggcaaagatgttcttgcgaaagcgaagacaggaacaggaaaaaccgttgcctttttg 634 ||||| |||||||| || || || || || ||||| || || ||||||||||| |||||| Sbjct: 1298 caaggtaaagatgtcctagccaaggccaaaacaggcactggtaaaaccgttgcatttttg 1357 Query: 635 ctgccagccattga 648 || ||||| ||||| Sbjct: 1358 cttccagcaattga 1371 Score = 44.1 bits (22), Expect = 2.2 Identities = 43/50 (86%) Strand = Plus / Plus Query: 857 cagattcttgttgctacacctggaaggcttaaggatcatcttgagaacac 906 ||||| ||||| ||||||||||||||||| || || ||| |||| ||||| Sbjct: 1580 cagatccttgtggctacacctggaaggctcaaagaccatattgaaaacac 1629
>dbj|AB006697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAH20 Length = 80970 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 1487 gagcagtatatacatagaattggtaggacaggacggaaaggcaaggaagggcagggcctc 1546 |||||||||||||||||| |||| || || || |||||||| ||||||||| | || || Sbjct: 60975 gagcagtatatacatagacttggcagaaccgggcggaaagggaaggaaggggaaggagtc 61034 Query: 1547 ttactgttggctccctgggaa 1567 ||| ||||||| || |||||| Sbjct: 61035 ttattgttggcaccatgggaa 61055 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1415 gatgtatctgctcgtggtgttgattatcctga 1446 |||||||||||||||||||||||||| ||||| Sbjct: 64195 gatgtatctgctcgtggtgttgattaccctga 64226 Score = 48.1 bits (24), Expect = 0.14 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1415 gatgtatctgctcgtggtgttgattatcctga 1446 |||||||||||||||||||| ||||| ||||| Sbjct: 60819 gatgtatctgctcgtggtgtggattaccctga 60850 Score = 46.1 bits (23), Expect = 0.56 Identities = 44/51 (86%) Strand = Plus / Plus Query: 856 tcagattcttgttgctacacctggaaggcttaaggatcatcttgagaacac 906 |||||| ||||| ||||||||||||||||| || || ||| |||| ||||| Sbjct: 60019 tcagatccttgtggctacacctggaaggctcaaagaccatattgaaaacac 60069
>ref|NM_120949.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding (AT5G08620) mRNA, complete cds Length = 1887 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1415 gatgtatctgctcgtggtgttgattatcctga 1446 |||||||||||||||||||||||||| ||||| Sbjct: 1269 gatgtatctgctcgtggtgttgattaccctga 1300
>gb|AY142638.1| Arabidopsis thaliana RNA helicase (At5g08620) mRNA, complete cds Length = 1723 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1415 gatgtatctgctcgtggtgttgattatcctga 1446 |||||||||||||||||||||||||| ||||| Sbjct: 1186 gatgtatctgctcgtggtgttgattaccctga 1217
>gb|AY035114.1| Arabidopsis thaliana putative RNA helicase (At5g08620) mRNA, complete cds Length = 1894 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1415 gatgtatctgctcgtggtgttgattatcctga 1446 |||||||||||||||||||||||||| ||||| Sbjct: 1268 gatgtatctgctcgtggtgttgattaccctga 1299
>emb|AJ010473.1|ATH010473 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH25 Length = 1830 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1415 gatgtatctgctcgtggtgttgattatcctga 1446 |||||||||||||||||||||||||| ||||| Sbjct: 1200 gatgtatctgctcgtggtgttgattaccctga 1231
>gb|CP000447.1| Shewanella frigidimarina NCIMB 400, complete genome Length = 4845257 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 947 gttcttgatgaagctgaccgcttactggatatgggatt 984 |||||||||||||| ||||| |||||||| |||||||| Sbjct: 1134213 gttcttgatgaagcagaccgattactggacatgggatt 1134250
>emb|BX832919.1|CNS09Z0J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL22ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 557 Score = 52.0 bits (26), Expect = 0.009 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 1487 gagcagtatatacatagaattgg-taggacaggacggaaaggcaaggaagggcagggcct 1545 |||||||||||||||||| |||| ||| || || |||||||| ||||||||| | || | Sbjct: 6 gagcagtatatacatagacttggctagaaccgggcggaaagggaaggaaggggaaggagt 65 Query: 1546 cttactgttggctccctgggaa 1567 |||| ||||||| || |||||| Sbjct: 66 cttattgttggcaccatgggaa 87
>gb|AE014848.1| Plasmodium falciparum 3D7 chromosome 12, section 5 of 9 of the complete sequence Length = 250707 Score = 50.1 bits (25), Expect = 0.036 Identities = 37/41 (90%) Strand = Plus / Minus Query: 945 ttgttcttgatgaagctgaccgcttactggatatgggattc 985 ||||| ||||||||||||| || ||||| |||||||||||| Sbjct: 86624 ttgttattgatgaagctgatcgtttacttgatatgggattc 86584
>gb|AY700082.1| Plasmodium falciparum DEAD box DNA helicase gene, complete cds Length = 1551 Score = 50.1 bits (25), Expect = 0.036 Identities = 37/41 (90%) Strand = Plus / Plus Query: 945 ttgttcttgatgaagctgaccgcttactggatatgggattc 985 ||||| ||||||||||||| || ||||| |||||||||||| Sbjct: 836 ttgttattgatgaagctgatcgtttacttgatatgggattc 876
>ref|NM_125758.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding (AT5G63630) mRNA, complete cds Length = 1569 Score = 48.1 bits (24), Expect = 0.14 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1415 gatgtatctgctcgtggtgttgattatcctgacgtcaccctcgtcatacaggttgg 1470 |||||||||||||| || |||||||| ||||| || ||||| || |||||||||| Sbjct: 1108 gatgtatctgctcgaggagttgattaccctgatgtgacccttgttttacaggttgg 1163 Score = 46.1 bits (23), Expect = 0.56 Identities = 77/95 (81%) Strand = Plus / Plus Query: 869 gctacacctggaaggcttaaggatcatcttgagaacacacctggtttttctactcggcta 928 ||||||||||||||||| || || ||| | |||||||| || || ||| | || || || Sbjct: 562 gctacacctggaaggctcaaagaccatatcgagaacacgccaggctttgcaacgaggtta 621 Query: 929 aaaggggtgaaggttcttgttcttgatgaagctga 963 || || ||||| || ||||| |||||||||||||| Sbjct: 622 aagggtgtgaaagtccttgtgcttgatgaagctga 656 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 706 gcttgtgatgtgccctactagagagcttgc 735 ||||||||| |||||||||||||| ||||| Sbjct: 399 gcttgtgatatgccctactagagaacttgc 428
>emb|AJ010477.1|ATH010477 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH31 Length = 885 Score = 48.1 bits (24), Expect = 0.14 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1415 gatgtatctgctcgtggtgttgattatcctgacgtcaccctcgtcatacaggttgg 1470 |||||||||||||| || |||||||| ||||| || ||||| || |||||||||| Sbjct: 716 gatgtatctgctcgaggagttgattaccctgatgtgacccttgttttacaggttgg 771 Score = 46.1 bits (23), Expect = 0.56 Identities = 77/95 (81%) Strand = Plus / Plus Query: 869 gctacacctggaaggcttaaggatcatcttgagaacacacctggtttttctactcggcta 928 ||||||||||||||||| || || ||| | |||||||| || || ||| | || || || Sbjct: 170 gctacacctggaaggctcaaagaccatatcgagaacacgccaggctttgcaacgaggtta 229 Query: 929 aaaggggtgaaggttcttgttcttgatgaagctga 963 || || ||||| || ||||| |||||||||||||| Sbjct: 230 aagggtgtgaaagtccttgtgcttgatgaagctga 264 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 706 gcttgtgatgtgccctactagagagcttgc 735 ||||||||| |||||||||||||| ||||| Sbjct: 7 gcttgtgatatgccctactagagaacttgc 36
>dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5 Length = 89779 Score = 48.1 bits (24), Expect = 0.14 Identities = 87/108 (80%) Strand = Plus / Minus Query: 856 tcagattcttgttgctacacctggaaggcttaaggatcatcttgagaacacacctggttt 915 ||||||| | || ||||||||||||||||| || || ||| | |||||||| || || || Sbjct: 27181 tcagattttagtggctacacctggaaggctcaaagaccatatcgagaacacgccaggctt 27122 Query: 916 ttctactcggctaaaaggggtgaaggttcttgttcttgatgaagctga 963 | | || || |||| || ||||| || ||||| |||||||||||||| Sbjct: 27121 tgcaacgaggttaaagggtgtgaaagtccttgtgcttgatgaagctga 27074 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 706 gcttgtgatgtgccctactagagagcttgc 735 ||||||||| |||||||||||||| ||||| Sbjct: 27444 gcttgtgatatgccctactagagaacttgc 27415 Score = 42.1 bits (21), Expect = 8.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1415 gatgtatctgctcgtggtgttgattatcctgacgtcaccct 1455 |||||||||||||| || |||||||| ||||| || ||||| Sbjct: 26443 gatgtatctgctcgaggagttgattaccctgatgtgaccct 26403
>emb|BX829938.1|CNS0A00D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB47ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1799 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1419 tatctgctcgtggtgttgattatcctga 1446 |||||||||||||||||||||| ||||| Sbjct: 1250 tatctgctcgtggtgttgattaccctga 1277
>ref|NM_001048686.1| Oryza sativa (japonica cultivar-group) Os01g0172200 (Os01g0172200) mRNA, complete cds Length = 2863 Score = 46.1 bits (23), Expect = 0.56 Identities = 35/39 (89%) Strand = Plus / Plus Query: 943 tcttgttcttgatgaagctgaccgcttactggatatggg 981 ||||||||||||||| ||||||||| | || |||||||| Sbjct: 1354 tcttgttcttgatgaggctgaccgcatgcttgatatggg 1392
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 169 cagcctccgcctccgcctccgtt 191 ||||||||||||||||||||||| Sbjct: 6064472 cagcctccgcctccgcctccgtt 6064494
>gb|AC151599.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018H03, complete sequence Length = 93081 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 988 aagagatattgaaaaaattatgg 1010 ||||||||||||||||||||||| Sbjct: 10517 aagagatattgaaaaaattatgg 10539
>gb|AC119678.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005H23, complete sequence Length = 32949 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 988 aagagatattgaaaaaattatgg 1010 ||||||||||||||||||||||| Sbjct: 27146 aagagatattgaaaaaattatgg 27168
>ref|XM_460822.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F11506g) partial mRNA Length = 1743 Score = 46.1 bits (23), Expect = 0.56 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1491 agtatatacatagaattggtaggacaggacg 1521 ||||||| |||||||||||||| |||||||| Sbjct: 1559 agtatattcatagaattggtagaacaggacg 1589
>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160001 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 169 cagcctccgcctccgcctccgtt 191 ||||||||||||||||||||||| Sbjct: 139991 cagcctccgcctccgcctccgtt 139969
>gb|AC023682.4| Drosophila melanogaster X BAC RP98-7F10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179236 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 169 cagcctccgcctccgcctccgtt 191 ||||||||||||||||||||||| Sbjct: 23270 cagcctccgcctccgcctccgtt 23248
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 988 aagagatattgaaaaaattatgg 1010 ||||||||||||||||||||||| Sbjct: 19583863 aagagatattgaaaaaattatgg 19583885 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 1553474 cagcctccgcctccgcctccg 1553494
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 46.1 bits (23), Expect = 0.56 Identities = 35/39 (89%) Strand = Plus / Minus Query: 943 tcttgttcttgatgaagctgaccgcttactggatatggg 981 ||||||||||||||| ||||||||| | || |||||||| Sbjct: 123635 tcttgttcttgatgaggctgaccgcatgcttgatatggg 123597
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 46.1 bits (23), Expect = 0.56 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1491 agtatatacatagaattggtaggacaggacg 1521 ||||||| |||||||||||||| |||||||| Sbjct: 920625 agtatattcatagaattggtagaacaggacg 920655
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 938 aaggttcttgttcttgatgaagc 960 ||||||||||||||||||||||| Sbjct: 723076 aaggttcttgttcttgatgaagc 723098
>emb|AL669826.10| Mouse DNA sequence from clone RP23-5N19 on chromosome 11 Contains a novel gene and a CpG island, complete sequence Length = 154338 Score = 46.1 bits (23), Expect = 0.56 Identities = 29/31 (93%) Strand = Plus / Minus Query: 50 aaccccctacccctactcccaaaaccctacc 80 |||||||||||||||||||| || ||||||| Sbjct: 103052 aaccccctacccctactccctaacccctacc 103022
>dbj|AK100326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079L21, full insert sequence Length = 2864 Score = 46.1 bits (23), Expect = 0.56 Identities = 35/39 (89%) Strand = Plus / Plus Query: 943 tcttgttcttgatgaagctgaccgcttactggatatggg 981 ||||||||||||||| ||||||||| | || |||||||| Sbjct: 1355 tcttgttcttgatgaggctgaccgcatgcttgatatggg 1393
>ref|XM_449053.1| Candida glabrata CBS138, CAGL0L06402g partial mRNA Length = 4608 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 938 aaggttcttgttcttgatgaagc 960 ||||||||||||||||||||||| Sbjct: 4351 aaggttcttgttcttgatgaagc 4373
>gb|DQ019638.1| Triticum aestivum DEAD-box ATPase-RNA-helicase (DRH1) mRNA, partial cds Length = 1571 Score = 46.1 bits (23), Expect = 0.56 Identities = 32/35 (91%) Strand = Plus / Plus Query: 947 gttcttgatgaagctgaccgcttactggatatggg 981 ||||||||||||||||||||| | || |||||||| Sbjct: 127 gttcttgatgaagctgaccgcatgcttgatatggg 161
>dbj|AK241349.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065148F23, full insert sequence Length = 1290 Score = 44.1 bits (22), Expect = 2.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1406 gttagttccgatgtatctgctcgtggtgttgattatcc 1443 ||||| ||||||||||||||| | || ||||||||||| Sbjct: 402 gttagctccgatgtatctgctaggggcgttgattatcc 439
>ref|XM_783269.2| PREDICTED: Strongylocentrotus purpuratus similar to ATP-dependent RNA helicase (LOC583357), partial mRNA Length = 1378 Score = 44.1 bits (22), Expect = 2.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 953 gatgaagctgaccgcttactggatatgggattca 986 |||||||||||||| || ||||| |||||||||| Sbjct: 110 gatgaagctgaccgattgctggacatgggattca 143
>ref|XM_001191273.1| PREDICTED: Strongylocentrotus purpuratus similar to ATP-dependent RNA helicase (LOC583357), partial mRNA Length = 1378 Score = 44.1 bits (22), Expect = 2.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 953 gatgaagctgaccgcttactggatatgggattca 986 |||||||||||||| || ||||| |||||||||| Sbjct: 110 gatgaagctgaccgattgctggacatgggattca 143
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1022 aaagaccgtcagacgctgctgttttc 1047 ||||| |||||||||||||||||||| Sbjct: 1297121 aaagaacgtcagacgctgctgttttc 1297146
>gb|AY083613.1| Pisum sativum translation elongation factor (tufA) gene, complete cds; nuclear gene for chloroplast product Length = 1985 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 gcctccgcctccgcctccgttt 192 |||||||||||||||||||||| Sbjct: 345 gcctccgcctccgcctccgttt 366
>gb|AC136019.3| Mus musculus BAC clone RP24-404D22 from chromosome 14, complete sequence Length = 162787 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 377 gaggaggaaggggaagggaagg 398 |||||||||||||||||||||| Sbjct: 130014 gaggaggaaggggaagggaagg 129993
>gb|AC123751.6| Mus musculus chromosome 8, clone RP24-187F1, complete sequence Length = 159523 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 377 gaggaggaaggggaagggaagg 398 |||||||||||||||||||||| Sbjct: 39806 gaggaggaaggggaagggaagg 39785
>gb|AC149092.6| Pan troglodytes BAC clone CH251-553I6 from chromosome 7, complete sequence Length = 194702 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 tgcagcctccgcctccgcctcc 188 |||||||||||||||||||||| Sbjct: 139550 tgcagcctccgcctccgcctcc 139571
>gb|AC068777.19| Homo sapiens 3 BAC RP11-278D22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 94170 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 tgcagcctccgcctccgcctcc 188 |||||||||||||||||||||| Sbjct: 62390 tgcagcctccgcctccgcctcc 62411
>gb|AC093078.3| Homo sapiens chromosome 19 clone LLNLR-305B7, complete sequence Length = 41898 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 tgcagcctccgcctccgcctcc 188 |||||||||||||||||||||| Sbjct: 5204 tgcagcctccgcctccgcctcc 5183
>gb|AC116664.1| Papio hamadryas, clone RP41-57E23, complete sequence Length = 175388 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 377 gaggaggaaggggaagggaagg 398 |||||||||||||||||||||| Sbjct: 23339 gaggaggaaggggaagggaagg 23318
>emb|Z86090.10|HS229A8 Human DNA sequence from clone CTA-229A8 on chromosome 22q13 Contains an RPL4 (60S Ribosomal Protein L4) and a GAPD (Liver Glyceraldehyde 3-Phosphate Dehydrogenase (EC 1.2.1.12)) pseudogene, the GPR24 gene for G protein-coupled receptor 24 (SLC1), ESTs, an STS, GSSs, genomic marker D22S279, a ca repeat polymorphism and a putative CpG island, complete sequence Length = 122557 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 tgcagcctccgcctccgcctcc 188 |||||||||||||||||||||| Sbjct: 11288 tgcagcctccgcctccgcctcc 11267
>emb|AL606468.8| Human DNA sequence from clone RP11-15I11 on chromosome 1 Contains the 3' end of the RAMP gene for RA-regulated nuclear matrix-associated protein, a novel gene and the 3' end of a novel gene, complete sequence Length = 160200 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 651 ttctctctaaattacccagttc 672 |||||||||||||||||||||| Sbjct: 63094 ttctctctaaattacccagttc 63115
>emb|AL583839.12| Human DNA sequence from clone RP11-165J3 on chromosome 9 Contains the 3' end of the PRKWNK2 gene for protein kinase, lysine deficient 2 (WNK2, NY-CO-43, SDCCAG43, P/OKcl.13), three novel genes, the 3' end of a novel gene and a CpG island, complete sequence Length = 140718 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 tgcagcctccgcctccgcctcc 188 |||||||||||||||||||||| Sbjct: 132453 tgcagcctccgcctccgcctcc 132432
>emb|AL136438.10| Human DNA sequence from clone RP11-111G7 on chromosome 13q11-12.3 Contains part of the ATP8A2 gene for ATPase, aminophospholipid transporter-like, Class I, type 8A, member 2 (ML-1 protein)(IB, ATP, ML-1, ATPIB, DKFZP434B1913), complete sequence Length = 178319 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 tgcagcctccgcctccgcctcc 188 |||||||||||||||||||||| Sbjct: 55851 tgcagcctccgcctccgcctcc 55830
>gb|AC073057.6| Homo sapiens BAC clone RP11-114G11 from 7, complete sequence Length = 178105 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 tgcagcctccgcctccgcctcc 188 |||||||||||||||||||||| Sbjct: 105775 tgcagcctccgcctccgcctcc 105754
>gb|AC068476.13| Homo sapiens chromosome 8, clone RP11-374B17, complete sequence Length = 205196 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 tgcagcctccgcctccgcctcc 188 |||||||||||||||||||||| Sbjct: 104277 tgcagcctccgcctccgcctcc 104298
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 44.1 bits (22), Expect = 2.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 944 cttgttcttgatgaagctgaccgcttactggatatggg 981 |||||| |||||||||||||||| | ||||||||||| Sbjct: 588073 cttgtttttgatgaagctgaccgtattctggatatggg 588110
>emb|Y14561.1|PSY14561 Pisum sativum mRNA for choloroplast translation elongation factor Length = 1731 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 gcctccgcctccgcctccgttt 192 |||||||||||||||||||||| Sbjct: 166 gcctccgcctccgcctccgttt 187
>emb|AJ010474.1|ATH010474 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH26 Length = 1787 Score = 44.1 bits (22), Expect = 2.2 Identities = 61/74 (82%) Strand = Plus / Plus Query: 575 caaggcaaagatgttcttgcgaaagcgaagacaggaacaggaaaaaccgttgcctttttg 634 ||||| |||||||| || || || || || ||||| || || ||||||||||| |||||| Sbjct: 986 caaggtaaagatgtcctagccaaggccaaaacaggcactggtaaaaccgttgcatttttg 1045 Query: 635 ctgccagccattga 648 || ||||| ||||| Sbjct: 1046 cttccagcaattga 1059 Score = 44.1 bits (22), Expect = 2.2 Identities = 43/50 (86%) Strand = Plus / Plus Query: 857 cagattcttgttgctacacctggaaggcttaaggatcatcttgagaacac 906 ||||| ||||| ||||||||||||||||| || || ||| |||| ||||| Sbjct: 1268 cagatccttgtggctacacctggaaggctcaaagaccatattgaaaacac 1317
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 44.1 bits (22), Expect = 2.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 603 agacaggaacaggaaaaaccgttgcctttttgctgcca 640 |||| |||||||||||||| | ||||||||||||||| Sbjct: 1469029 agactggaacaggaaaaacgctcgcctttttgctgcca 1469066
>gb|AC067957.7| Homo sapiens BAC clone RP11-82K13 from 2, complete sequence Length = 165373 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 tgcagcctccgcctccgcctcc 188 |||||||||||||||||||||| Sbjct: 71174 tgcagcctccgcctccgcctcc 71195
>gb|AC148935.6| Pan troglodytes BAC clone CH251-485J2 from chromosome 7, complete sequence Length = 215177 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 tgcagcctccgcctccgcctcc 188 |||||||||||||||||||||| Sbjct: 151192 tgcagcctccgcctccgcctcc 151213
>gb|AC157983.16| Medicago truncatula clone mth2-130n5, complete sequence Length = 114996 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1497 tacatagaattggtaggacagg 1518 |||||||||||||||||||||| Sbjct: 113588 tacatagaattggtaggacagg 113609
>gb|AC133197.3| Mus musculus BAC clone RP23-228E15 from 8, complete sequence Length = 197899 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 377 gaggaggaaggggaagggaagg 398 |||||||||||||||||||||| Sbjct: 1202 gaggaggaaggggaagggaagg 1181
>ref|XM_725001.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02224) partial mRNA Length = 2727 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1493 tatatacatagaattggtaggacagg 1518 |||||||||||||||||||| ||||| Sbjct: 2065 tatatacatagaattggtagaacagg 2090
>ref|XM_723919.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01284) partial mRNA Length = 1965 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1497 tacatagaattggtaggacagg 1518 |||||||||||||||||||||| Sbjct: 1622 tacatagaattggtaggacagg 1643
>ref|XM_672842.1| Plasmodium berghei strain ANKA RNA helicase (PB000057.03.0), partial mRNA Length = 2568 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1493 tatatacatagaattggtaggacagg 1518 |||||||||||||||||||| ||||| Sbjct: 1906 tatatacatagaattggtagaacagg 1931
>gb|AC004598.1|AC004598 Homo sapiens chromosome 19, cosmid F21944, complete sequence Length = 41133 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 tgcagcctccgcctccgcctcc 188 |||||||||||||||||||||| Sbjct: 34395 tgcagcctccgcctccgcctcc 34374
>gb|CP000469.1| Shewanella sp. ANA-3, complete genome Length = 4972204 Score = 42.1 bits (21), Expect = 8.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 956 gaagctgaccgcttactggatatgggatt 984 ||||| |||||||||||||| |||||||| Sbjct: 1129886 gaagccgaccgcttactggaaatgggatt 1129914
>emb|CT828051.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA232I20, full insert sequence Length = 2352 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 16 cagcctccgcctccgcctccg 36
>emb|CT831985.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN087O24, full insert sequence Length = 1576 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 80 cagcctccgcctccgcctccg 100
>dbj|AK241670.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065192E05, full insert sequence Length = 1742 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 21 cagcctccgcctccgcctccg 41
>ref|NM_001073579.1| Oryza sativa (japonica cultivar-group) Os12g0565300 (Os12g0565300) mRNA, complete cds Length = 2595 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 gagcaacgaaacatgcaggct 847 ||||||||||||||||||||| Sbjct: 1509 gagcaacgaaacatgcaggct 1529
>ref|NM_001072202.1| Oryza sativa (japonica cultivar-group) Os11g0133600 (Os11g0133600) mRNA, complete cds Length = 1401 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 153 cagcctccgcctccgcctccg 173
>ref|XM_001218165.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_09544) mRNA, complete cds Length = 2259 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 gcagcctccgcctccgcctcc 188 ||||||||||||||||||||| Sbjct: 2256 gcagcctccgcctccgcctcc 2236
>gb|CP000446.1| Shewanella sp. MR-4, complete genome Length = 4706287 Score = 42.1 bits (21), Expect = 8.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 956 gaagctgaccgcttactggatatgggatt 984 ||||| |||||||||||||| |||||||| Sbjct: 1124472 gaagcagaccgcttactggaaatgggatt 1124500
>gb|AC182641.3| Pan troglodytes BAC clone CH251-294H6 from chromosome 7, complete sequence Length = 145564 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 gcagcctccgcctccgcctcc 188 ||||||||||||||||||||| Sbjct: 16603 gcagcctccgcctccgcctcc 16583
>gb|AC136746.15| Mus musculus chromosome 5, clone RP23-151C5, complete sequence Length = 195530 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 ggagggacccggagggcggac 332 ||||||||||||||||||||| Sbjct: 152929 ggagggacccggagggcggac 152949
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 113691 cagcctccgcctccgcctccg 113711
>gb|AE009303.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 73 of 187 of the complete sequence Length = 10533 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1883 ccgcaagggcaagcaggactc 1903 ||||||||||||||||||||| Sbjct: 8925 ccgcaagggcaagcaggactc 8905
>gb|AE008310.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 114 of 187 of the complete sequence Length = 11071 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1883 ccgcaagggcaagcaggactc 1903 ||||||||||||||||||||| Sbjct: 9169 ccgcaagggcaagcaggactc 9189
>gb|AY811663.1| Schistosoma japonicum SJCHGC05414 protein mRNA, partial cds Length = 986 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 951 ttgatgaagctgaccgcttactgga 975 |||||||||||||||| |||||||| Sbjct: 620 ttgatgaagctgaccgattactgga 644
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 68010 cagcctccgcctccgcctccg 68030
>gb|AC122459.2| Mus musculus BAC clone RP24-273F21 from chromosome 15, complete sequence Length = 156807 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 gcagcctccgcctccgcctcc 188 ||||||||||||||||||||| Sbjct: 153269 gcagcctccgcctccgcctcc 153249
>gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome 15, complete sequence Length = 181742 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 gcagcctccgcctccgcctcc 188 ||||||||||||||||||||| Sbjct: 21137 gcagcctccgcctccgcctcc 21117
>gb|AC122831.2| Mus musculus BAC clone RP23-179B10 from 3, complete sequence Length = 204672 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 77894 cagcctccgcctccgcctccg 77914
>gb|AC116657.3| Mus musculus BAC clone RP23-289E18 from 15, complete sequence Length = 184557 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 ttctctctaaattacccagtt 671 ||||||||||||||||||||| Sbjct: 90848 ttctctctaaattacccagtt 90868
>dbj|AK027885.1| Homo sapiens cDNA FLJ14979 fis, clone Y79AA1000037, moderately similar to DNA-BINDING PROTEIN BMI-1 Length = 1875 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 ccttgcagcctccgcctccgcctcc 188 |||||| |||||||||||||||||| Sbjct: 81 ccttgccgcctccgcctccgcctcc 105
>gb|AC155932.6| Mus musculus BAC clone RP23-85K13 from chromosome 10, complete sequence Length = 239525 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 gtcaaagatgctggatatgga 532 ||||||||||||||||||||| Sbjct: 61181 gtcaaagatgctggatatgga 61161
>ref|XM_757174.1| Ustilago maydis 521 hypothetical protein (UM06120.1) partial mRNA Length = 3363 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 ttgcagcctccgcctccgcctccgt 190 |||| |||||||||||||||||||| Sbjct: 2534 ttgccgcctccgcctccgcctccgt 2510
>emb|CR759880.7| Zebrafish DNA sequence from clone DKEY-32O22 in linkage group 9, complete sequence Length = 183450 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 tgcagcctccgcctccgcctc 187 ||||||||||||||||||||| Sbjct: 14272 tgcagcctccgcctccgcctc 14252
>ref|XM_805251.1| Trypanosoma cruzi strain CL Brener ATP-dependent DEAD/H RNA helicase (Tc00.1047053509719.20) partial mRNA Length = 2484 Score = 42.1 bits (21), Expect = 8.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 945 ttgttcttgatgaagctgaccgcttactggatatggg 981 |||| |||||||| ||||| || |||||||||||||| Sbjct: 899 ttgtccttgatgaggctgatcgattactggatatggg 935
>ref|XM_803572.1| Trypanosoma cruzi strain CL Brener ATP-dependent DEAD/H RNA helicase (Tc00.1047053506713.30) partial mRNA Length = 2484 Score = 42.1 bits (21), Expect = 8.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 945 ttgttcttgatgaagctgaccgcttactggatatggg 981 |||| |||||||| ||||| || |||||||||||||| Sbjct: 899 ttgtccttgatgaggctgatcgattactggatatggg 935
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 827 gagcaacgaaacatgcaggct 847 ||||||||||||||||||||| Sbjct: 23231666 gagcaacgaaacatgcaggct 23231646
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 4494765 cagcctccgcctccgcctccg 4494745
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 gcgccccttcttccctggccg 230 ||||||||||||||||||||| Sbjct: 3764406 gcgccccttcttccctggccg 3764386
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 24439638 cagcctccgcctccgcctccg 24439618 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 34463234 cagcctccgcctccgcctccg 34463254
>emb|AL590882.1|SPBC691 S.pombe chromosome II cosmid c691 Length = 11764 Score = 42.1 bits (21), Expect = 8.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 953 gatgaagctgaccgcttactggatatggg 981 |||||||||||||| ||| |||||||||| Sbjct: 9212 gatgaagctgaccgtttaatggatatggg 9240
>gb|AC009455.9| Homo sapiens chromosome 18, clone RP11-169F17, complete sequence Length = 191356 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 ttctctctaaattacccagtt 671 ||||||||||||||||||||| Sbjct: 35901 ttctctctaaattacccagtt 35921
>gb|AC152416.2| Mus musculus BAC clone RP23-352L15 from chromosome 5, complete sequence Length = 204014 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1473 ttccttctggtagagagcagt 1493 ||||||||||||||||||||| Sbjct: 146330 ttccttctggtagagagcagt 146310
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 42.1 bits (21), Expect = 8.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 956 gaagctgaccgcttactggatatgggatt 984 |||||||||||| | |||||||||||||| Sbjct: 1665127 gaagctgaccgcatgctggatatgggatt 1665155
>gb|AC154261.2| Mus musculus BAC clone RP24-303N7 from chromosome 9, complete sequence Length = 172079 Score = 42.1 bits (21), Expect = 8.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1507 tggtaggacaggacggaaaggcaaggaagggca 1539 ||||||||||||| | || |||||||||||||| Sbjct: 130592 tggtaggacaggaggcaatggcaaggaagggca 130624
>ref|NM_001021492.1| Schizosaccharomyces pombe 972h- DEAD/DEAH box helicase (SPBC691.04), partial mRNA Length = 1608 Score = 42.1 bits (21), Expect = 8.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 953 gatgaagctgaccgcttactggatatggg 981 |||||||||||||| ||| |||||||||| Sbjct: 583 gatgaagctgaccgtttaatggatatggg 611
>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete sequence Length = 115393 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 76932 cagcctccgcctccgcctccg 76912
>emb|AL606605.4|OSJN00049 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089E12, complete sequence Length = 154111 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 gcgccccttcttccctggccg 230 ||||||||||||||||||||| Sbjct: 107827 gcgccccttcttccctggccg 107807
>emb|AL034559.4|PFMAL3P7 Plasmodium falciparum MAL3P7, complete sequence Length = 253305 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1103 tataggttcattaacactgtt 1123 ||||||||||||||||||||| Sbjct: 19659 tataggttcattaacactgtt 19639
>ref|NM_131381.1| Danio rerio glycogen synthase kinase 3 beta (gsk3b), mRNA emb|AJ223502.1|DAR223502 Danio rerio cDNA for glycogen synthase kinase 3 beta Length = 2624 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 tgcagcctccgcctccgcctc 187 ||||||||||||||||||||| Sbjct: 1931 tgcagcctccgcctccgcctc 1951
>gb|AC022846.9| Homo sapiens chromosome 8, clone RP11-253N21, complete sequence Length = 123570 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1290 ttgctgaagttctctctcagc 1310 ||||||||||||||||||||| Sbjct: 119183 ttgctgaagttctctctcagc 119163
>gb|AC105145.6| Homo sapiens BAC clone RP11-722E24 from 2, complete sequence Length = 32867 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 650 gttctctctaaattacccagt 670 ||||||||||||||||||||| Sbjct: 28337 gttctctctaaattacccagt 28357
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 73484 cagcctccgcctccgcctccg 73464
>gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, complete sequence Length = 149462 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 gaggaggaaggggaagggaag 397 ||||||||||||||||||||| Sbjct: 78482 gaggaggaaggggaagggaag 78462
>gb|AC022910.9| Homo sapiens chromosome 8, clone RP11-710C11, complete sequence Length = 181944 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1290 ttgctgaagttctctctcagc 1310 ||||||||||||||||||||| Sbjct: 29122 ttgctgaagttctctctcagc 29102
>gb|AC079193.10| Homo sapiens chromosome 8, clone RP11-468H14, complete sequence Length = 169041 Score = 42.1 bits (21), Expect = 8.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 157 ggcctccccttgcagcctccgcctccgcctccg 189 ||||||| || |||||| ||||||||||||||| Sbjct: 140533 ggcctccgctcgcagccgccgcctccgcctccg 140565
>dbj|AK121566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034N15, full insert sequence Length = 1676 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 277 cagcctccgcctccgcctccg 257
>gb|AC091050.3| Homo sapiens chromosome 8, clone RP11-242F4, complete sequence Length = 139980 Score = 42.1 bits (21), Expect = 8.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 157 ggcctccccttgcagcctccgcctccgcctccg 189 ||||||| || |||||| ||||||||||||||| Sbjct: 95504 ggcctccgctcgcagccgccgcctccgcctccg 95472
>dbj|AK073968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071N15, full insert sequence Length = 2596 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 gagcaacgaaacatgcaggct 847 ||||||||||||||||||||| Sbjct: 1510 gagcaacgaaacatgcaggct 1530
>dbj|AK058340.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-D07, full insert sequence Length = 1401 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 153 cagcctccgcctccgcctccg 173
>emb|AL929140.16| Mouse DNA sequence from clone RP23-188A4 on chromosome 2, complete sequence Length = 120665 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 aggaggaaggggaagggaagg 398 ||||||||||||||||||||| Sbjct: 37293 aggaggaaggggaagggaagg 37313
>dbj|AP006207.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-702B3, complete sequence Length = 170015 Score = 42.1 bits (21), Expect = 8.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 157 ggcctccccttgcagcctccgcctccgcctccg 189 ||||||| || |||||| ||||||||||||||| Sbjct: 109855 ggcctccgctcgcagccgccgcctccgcctccg 109887
>dbj|AB047006.1| Homo sapiens hMBLR mRNA, complete cds Length = 1853 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 ccttgcagcctccgcctccgcctcc 188 |||||| |||||||||||||||||| Sbjct: 81 ccttgccgcctccgcctccgcctcc 105
>dbj|AB004535.1| Schizosaccharomyces pombe 42.8 kb genomic DNA, clone c973 Length = 42759 Score = 42.1 bits (21), Expect = 8.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 953 gatgaagctgaccgcttactggatatggg 981 |||||||||||||| ||| |||||||||| Sbjct: 39458 gatgaagctgaccgtttaatggatatggg 39430
>gb|BC010235.1| Homo sapiens polycomb group ring finger 6, mRNA (cDNA clone MGC:17541 IMAGE:3461513), complete cds Length = 2254 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 ccttgcagcctccgcctccgcctcc 188 |||||| |||||||||||||||||| Sbjct: 133 ccttgccgcctccgcctccgcctcc 157
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 942 ttcttgttcttgatgaagctgaccg 966 |||| |||||||||||||||||||| Sbjct: 2026131 ttctggttcttgatgaagctgaccg 2026155
>gb|AF049880.1|AF049880 Mus musculus TGFb inducible early protein and hypothetical TGFb inducible early protein splice variant genes, complete cds Length = 7228 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 gcagcctccgcctccgcctcc 188 ||||||||||||||||||||| Sbjct: 318 gcagcctccgcctccgcctcc 338
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 827 gagcaacgaaacatgcaggct 847 ||||||||||||||||||||| Sbjct: 44784 gagcaacgaaacatgcaggct 44764
>gb|BC050272.1| Homo sapiens zinc finger, DHHC-type containing 2, mRNA (cDNA clone MGC:21181 IMAGE:4398300), complete cds Length = 2096 Score = 42.1 bits (21), Expect = 8.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 157 ggcctccccttgcagcctccgcctccgcctccg 189 ||||||| || |||||| ||||||||||||||| Sbjct: 462 ggcctccgctcgcagccgccgcctccgcctccg 494
>gb|BC007602.1| Homo sapiens polycomb group ring finger 6, mRNA (cDNA clone MGC:15678 IMAGE:3350074), complete cds Length = 1974 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 ccttgcagcctccgcctccgcctcc 188 |||||| |||||||||||||||||| Sbjct: 78 ccttgccgcctccgcctccgcctcc 102
>gb|AC171110.2| Mus musculus BAC clone RP24-503L4 from chromosome 3, complete sequence Length = 207203 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cagcctccgcctccgcctccg 189 ||||||||||||||||||||| Sbjct: 186643 cagcctccgcctccgcctccg 186663
>dbj|AB023584.1| Homo sapiens rec mRNA, complete cds Length = 3322 Score = 42.1 bits (21), Expect = 8.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 157 ggcctccccttgcagcctccgcctccgcctccg 189 ||||||| || |||||| ||||||||||||||| Sbjct: 164 ggcctccgctcgcagccgccgcctccgcctccg 196
>dbj|AB020859.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 2/11 Length = 100000 Score = 42.1 bits (21), Expect = 8.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 157 ggcctccccttgcagcctccgcctccgcctccg 189 ||||||| || |||||| ||||||||||||||| Sbjct: 70759 ggcctccgctcgcagccgccgcctccgcctccg 70791 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 392,902,809 Number of extensions: 20831685 Number of successful extensions: 140042 Number of sequences better than 10.0: 131 Number of HSP's gapped: 140023 Number of HSP's successfully gapped: 209 Length of query: 2267 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2244 Effective length of database: 18,503,978,556 Effective search space: 41522927879664 Effective search space used: 41522927879664 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
