ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121070:Os05g0594900 169 2e-42
2AK099454:Os04g0445800 61 7e-10
3Os03g0410900:Os03g0410900 43 2e-04
4AK121665:Os08g0177700 43 2e-04
5AK110529: 37 0.014
6AK120837:Os07g0608700 37 0.014
7AK059190:Os05g0389300 37 0.014
8AK106547:Os08g0101500 33 0.21
9AK103792:Os08g0101500 33 0.21
10AK068461:Os02g0741900 32 0.46
11AK063621:Os02g0126700 31 0.78
12AK059440:Os08g0151400 30 1.3
13Os09g0121600:Os09g0121600 30 1.7
14AK106383:Os10g0492500 30 1.7
15Os05g0196800:Os05g0196800 29 3.0
16AK119265:Os05g0571400 29 3.0
17U57640:Os01g0124400 29 3.9
18AK105130:Os01g0276900 29 3.9
19AK068923:Os03g0347900 28 5.0
20AK065109:Os03g0347900 28 5.0
21Os05g0188700:Os05g0188700 28 6.6
22Os04g0563900:Os04g0563900 28 6.6
23AK063761:Os05g0105900 28 6.6
24AK102216:Os01g0142800 28 8.7
25AK074001:Os08g0542900 28 8.7
26AK072871:Os05g0269500 28 8.7
27AK064378:Os08g0542900 28 8.7

>AK121070:Os05g0594900 |
          Length = 99
 Score =  169 bits (427), Expect = 2e-42
 Identities = 85/92 (92%), Positives = 88/92 (95%)
 Frame = +2

Query: 158 LESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRG 337
           LESLVDQ+ISVITNDGRNIVGTLRGFDQATNIILDESHERVYST+EGVQQLVLGLYIIRG
Sbjct: 8   LESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTREGVQQLVLGLYIIRG 67

Query: 338 DNIGVVGEVDEELDAALDMSKLRAQPLKPVIH 433
           DNI VVGEVDEELDA LD+S LRA PLKPVIH
Sbjct: 68  DNISVVGEVDEELDARLDLSNLRAHPLKPVIH 99



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>AK099454:Os04g0445800 |
          Length = 129

 Score = 61.2 bits (147), Expect = 7e-10
 Identities = 31/75 (41%), Positives = 48/75 (64%)
 Frame = +2

Query: 155 TLESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIR 334
           +L   +D+ + V+  DGR ++GTL  FDQ  N++L  + ERV    E    + LGLY+IR
Sbjct: 15  SLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVI-VGELYCDVPLGLYVIR 73

Query: 335 GDNIGVVGEVDEELD 379
           G+N+ ++GE+D E D
Sbjct: 74  GENVVLIGELDREKD 88



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>Os03g0410900:Os03g0410900 |
          Length = 80

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 21/66 (31%), Positives = 40/66 (60%)
 Frame = +2

Query: 158 LESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRG 337
           L+  +D+ + +  N  R IVGTLRGFDQ  N+++D + E       G  +  +G+ ++RG
Sbjct: 10  LKKYMDKKLQIKLNANRVIVGTLRGFDQFMNLVVDNTVE-----VNGNDKTDIGMVVVRG 64

Query: 338 DNIGVV 355
           +++ ++
Sbjct: 65  NSVVMI 70



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>AK121665:Os08g0177700 |
          Length = 98

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = +2

Query: 158 LESLVDQVISVITNDGRNIVGTLRGFDQATNIILDES----HERVYSTKEGVQQLVLGLY 325
           L   VD+ + V    GR + GTL+G+DQ  N++LDE+     E+    K   +   LGL 
Sbjct: 11  LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFEREQDDPLKLSGKTRQLGLI 70

Query: 326 IIRGDNIGVVGEVD 367
           + RG  + +V   D
Sbjct: 71  VCRGTAVMLVSPTD 84



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>AK110529: |
          Length = 264

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
 Frame = +2

Query: 170 VDQVISVITNDGRNIVGTLRGFDQATNIILDESHE-------RVYSTKEGVQQLVLGLYI 328
           V+  + V   DGR I G    +D+  N++L +S E       +  S +E  ++ VLG+ +
Sbjct: 13  VNYRMRVTLTDGRQICGRFMAYDRHMNLVLGDSEEFRKLPPKKGKSDEEREERRVLGMLL 72

Query: 329 IRGDNI 346
           +RGD I
Sbjct: 73  LRGDEI 78



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>AK120837:Os07g0608700 |
          Length = 67

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = +2

Query: 158 LESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHE 274
           L+  +D+ + +  N  R ++GTLRGFDQ  N+++D + E
Sbjct: 10  LKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE 48



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>AK059190:Os05g0389300 |
          Length = 89

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 21/66 (31%), Positives = 36/66 (54%)
 Frame = +2

Query: 158 LESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRG 337
           ++  +   I VI    + +VGTL GFD   N++L++  E  Y T EG +   L   ++ G
Sbjct: 15  IDRCIGSKIWVIMKGDKELVGTLCGFDVYVNMVLEDVTEYEY-TAEGRRITKLDQILLNG 73

Query: 338 DNIGVV 355
           +NI ++
Sbjct: 74  NNIAIL 79



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>AK106547:Os08g0101500 |
          Length = 477

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 21/61 (34%), Positives = 27/61 (44%)
 Frame = +1

Query: 115 P*RERSDSTKGDGDARVPRRPGDLRHHQRRPQHRGNSAGVRPGHQHHPRRVPREGLLHQG 294
           P R  + +    G    PR    L+ H R P  R ++   RP H+ H RR PR  LL   
Sbjct: 61  PHRAVAGAVPAAGPRHHPRLHRHLQRHHRPPLRRPHA---RPAHEVHRRRRPRRPLLRHP 117

Query: 295 G 297
           G
Sbjct: 118 G 118



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>AK103792:Os08g0101500 |
          Length = 475

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 21/61 (34%), Positives = 27/61 (44%)
 Frame = +1

Query: 115 P*RERSDSTKGDGDARVPRRPGDLRHHQRRPQHRGNSAGVRPGHQHHPRRVPREGLLHQG 294
           P R  + +    G    PR    L+ H R P  R ++   RP H+ H RR PR  LL   
Sbjct: 59  PHRAVAGAVPAAGPRHHPRLHRHLQRHHRPPLRRPHA---RPAHEVHRRRRPRRPLLRHP 115

Query: 295 G 297
           G
Sbjct: 116 G 116



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>AK068461:Os02g0741900 |
          Length = 181

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
 Frame = +2

Query: 161 ESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGD 340
           E  +  +ISV T  G    G +  FD+ TN+++ +  E V   + G ++ V  L      
Sbjct: 7   EFAIGVLISVKTTLGEEFEGQIVSFDRPTNLLVIQ--EGVGRAERGERRNVRVLKANYIR 64

Query: 341 NIGVVGEVDEELDAA---LDMSKLRAQ 412
              VVG+ D+ LD A   LD++ + A+
Sbjct: 65  EFSVVGKADDPLDPAGCVLDLAAIHAR 91



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>AK063621:Os02g0126700 |
          Length = 88

 Score = 31.2 bits (69), Expect = 0.78
 Identities = 17/45 (37%), Positives = 29/45 (64%)
 Frame = +2

Query: 212 IVGTLRGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNI 346
           I G + GFD+  N++LDE+ E   + K+  ++  LG  +++GDNI
Sbjct: 39  IEGRIIGFDEYMNLVLDEAEE--INIKKDTRK-SLGRILLKGDNI 80



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>AK059440:Os08g0151400 |
          Length = 64

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 16/45 (35%), Positives = 29/45 (64%)
 Frame = +2

Query: 212 IVGTLRGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNI 346
           I G + GFD+  N++LD++ E   + K+  ++  LG  +++GDNI
Sbjct: 15  IEGRIIGFDEYMNLVLDDAEE--INVKKDTRK-SLGRILLKGDNI 56



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>Os09g0121600:Os09g0121600 |
          Length = 1173

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +2

Query: 266 SHERVYSTKEGVQQLVLGLYI----IRGDNIGVVGEVDEELDAALDMSKL 403
           S   +Y  + G  QLV+G+Y+    I G N   + +  +E+ AA  MS L
Sbjct: 832 SEHAIYVRRNGNAQLVVGVYVDDLMITGSNYDDIRQFKKEMAAAFKMSDL 881



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>AK106383:Os10g0492500 |
          Length = 269

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 124 ERSDSTKGDGDARVPRRPGDLRHHQRRPQHRGNSAGVRPGHQHHPRR 264
           E +   + +GD RV    GD+  H+ R + R     VR  H+H P R
Sbjct: 87  EAAAEERAEGDGRVDVAAGDVDGHRHRHRQRQR---VRQRHRHQPSR 130



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>Os05g0196800:Os05g0196800 |
          Length = 437

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +1

Query: 133 DSTKGDGDARVPRRPGDLRHHQRR-PQHRGNSAGVRPGHQHHPRRVPREG 279
           D   G G+A  P  P    HH RR P+ RG S  +  G     RR  R G
Sbjct: 7   DGDGGGGEAHAPAAPA---HHHRRPPRPRGGSGAIVEGFAAALRRRIRSG 53



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>AK119265:Os05g0571400 |
          Length = 346

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 10/44 (22%)
 Frame = +1

Query: 184 LRHHQRR-------PQHRGNSAGVRPGHQHHPRR---VPREGLL 285
           L+HH +R       P   G  AG  P H+H PRR   VPR  LL
Sbjct: 292 LQHHPQRRLVRRRAPAGGGARAGHDPAHEHVPRRHAFVPRPRLL 335



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>U57640:Os01g0124400 |
          Length = 182

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 166 PRRPGDLRHHQRRPQHRGNSAGVRPGHQHH 255
           P  P   R H+RRP+H G     R  HQHH
Sbjct: 7   PSLPPPRRPHRRRPRHGGR----RHHHQHH 32



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>AK105130:Os01g0276900 |
          Length = 211

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +1

Query: 199 RRPQHRGNSAGVRPG-HQHHPRRVPREGLLHQGG 297
           R P+ RG   G   G H HH RR   EG   QGG
Sbjct: 42  RLPRPRGGGGGGGGGDHNHHQRRRLPEGAASQGG 75



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>AK068923:Os03g0347900 |
          Length = 206

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
 Frame = -3

Query: 589 HHTRRRTL----SVHGMRYEI*ASDQSINLQYRLTEQNQLWLAQSGSDR*KIPSSSVNDR 422
           HH  RR       +HG  +   +S   + L++RL  Q+ LW++    ++ K P    N  
Sbjct: 35  HHFERRIAVALSDIHGAEFNS-SSLHDVALRFRLLRQHGLWVSPDEFNKFKGPDGRFNAE 93

Query: 421 LEGLRSELRHVQRRVKLLVHLTHHAYVVAPDDVQSEDKLLYS 296
           +      +  +     LL+H           +V+ ED +L S
Sbjct: 94  VIDDPMGMLSLYNAAHLLIH----------GEVELEDAILLS 125



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>AK065109:Os03g0347900 |
          Length = 502

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
 Frame = -3

Query: 589 HHTRRRTL----SVHGMRYEI*ASDQSINLQYRLTEQNQLWLAQSGSDR*KIPSSSVNDR 422
           HH  RR       +HG  +   +S   + L++RL  Q+ LW++    ++ K P    N  
Sbjct: 35  HHFERRIAVALSDIHGAEFNS-SSLHDVALRFRLLRQHGLWVSPDEFNKFKGPDGRFNAE 93

Query: 421 LEGLRSELRHVQRRVKLLVHLTHHAYVVAPDDVQSEDKLLYS 296
           +      +  +     LL+H           +V+ ED +L S
Sbjct: 94  VIDDPMGMLSLYNAAHLLIH----------GEVELEDAILLS 125



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>Os05g0188700:Os05g0188700 |
          Length = 440

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
 Frame = +1

Query: 112 QP*RERSDSTKGDGDARVPRRPGDLRHHQRRPQHRGNSAGVRPGHQHHPRRVPREGL--L 285
           QP R R       GDA V    GD  H + +P HR    GVR         VP++    L
Sbjct: 223 QPVRRRDP-----GDALVVSGDGD--HAREQPPHRPRPVGVRLRRPRPGGAVPQQQAHRL 275

Query: 286 HQGGS 300
           H GG+
Sbjct: 276 HSGGA 280



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>Os04g0563900:Os04g0563900 |
          Length = 386

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +1

Query: 121 RERSDSTKGDGDARVPRRPG--DLRHHQRRPQHRGNSAGVRPGH 246
           R ++ S++ D   RVP R G     HH    + R  S G R G+
Sbjct: 337 RPKAASSREDASPRVPTRSGGHGHHHHHHSSRPRSGSDGARSGY 380



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>AK063761:Os05g0105900 |
          Length = 398

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +1

Query: 166 PRRPGDLRHHQRRPQHRGNSAGVRPGHQHHPRR 264
           PRRP  LRH  R P HR   +   P     PRR
Sbjct: 309 PRRPQSLRHRSRSPIHRPIRS---PSRSISPRR 338



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>AK102216:Os01g0142800 |
          Length = 510

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 175 PGDLRHHQRRPQHRGNSAGVRPGHQ 249
           PG +  H R PQ     AGVRP H+
Sbjct: 285 PGGVALHLRHPQRHRLGAGVRPPHR 309



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>AK074001:Os08g0542900 |
          Length = 427

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
 Frame = +1

Query: 166 PRRPGDLRHHQRRP--QHRGNSAGVRPGHQHH 255
           PR      HH   P  QHRG   G    HQ H
Sbjct: 38  PRSAAHHHHHHANPRRQHRGGGGGAYHHHQQH 69



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>AK072871:Os05g0269500 |
          Length = 722

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +1

Query: 148 DGDARVPRRPGDLRHHQRRPQHRGNSAGVRPGHQHH 255
           D D R  RR    RHH+    HR         H HH
Sbjct: 592 DDDYRARRRHQKGRHHRHHHDHRHRHGHSHGDHHHH 627



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>AK064378:Os08g0542900 |
          Length = 427

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
 Frame = +1

Query: 166 PRRPGDLRHHQRRP--QHRGNSAGVRPGHQHH 255
           PR      HH   P  QHRG   G    HQ H
Sbjct: 38  PRSAAHHHHHHANPRRQHRGGGGGAYHHHQQH 69


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 17,266,626
Number of extensions: 346253
Number of successful extensions: 1257
Number of sequences better than 10.0: 27
Number of HSP's gapped: 1254
Number of HSP's successfully gapped: 27
Length of query: 248
Length of database: 15,399,855
Length adjustment: 98
Effective length of query: 150
Effective length of database: 11,475,837
Effective search space: 1721375550
Effective search space used: 1721375550
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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