ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY110400.1| Zea mays CL15423_2 mRNA sequence 198 2e-47
2emb|CT834032.1| Oryza sativa (indica cultivar-group) cDNA clone:... 178 2e-41
3ref|NM_001063045.1| Oryza sativa (japonica cultivar-group) Os05g... 178 2e-41
4dbj|AK121070.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 2e-41
5gb|DQ196187.1| Triticum monococcum cultivar DV92 putative small ... 123 1e-24
6gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome... 68 5e-08
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 68 5e-08
8ref|NM_001036161.1| Arabidopsis thaliana unknown protein (AT1G65... 54 7e-04
9ref|NM_105244.1| Arabidopsis thaliana unknown protein (AT1G65700... 54 7e-04
10gb|AY094059.1| Arabidopsis thaliana At1g65700/F1E22_3 mRNA, comp... 54 7e-04
11gb|AY070767.1| Arabidopsis thaliana At1g65700/F1E22_3 mRNA, comp... 54 7e-04
12gb|AY087015.1| Arabidopsis thaliana clone 30530 mRNA, complete s... 54 7e-04
13emb|BX814351.1|CNS0AEHV Arabidopsis thaliana Full-length cDNA Co... 54 7e-04
14emb|BX817463.1|CNS0ACF1 Arabidopsis thaliana Full-length cDNA Co... 54 7e-04
15emb|BX841891.1|CNS09Y6Y Arabidopsis thaliana Full-length cDNA Co... 54 7e-04
16ref|NM_001049737.1| Oryza sativa (japonica cultivar-group) Os01g... 52 0.003
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
18dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
19dbj|AK069603.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.003
20gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete seq... 46 0.18
21gb|AF279873.4| Homo sapiens chromosome 8 clone RP1-25D10, RP1-27... 46 0.18
22dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.18
23gb|AC019050.4| Homo sapiens BAC clone RP11-92K14 from 2, complet... 46 0.18
24dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic D... 46 0.18
25ref|XM_707703.1| Candida albicans SC5314 putative L24-like nucle... 44 0.71
26ref|XM_707552.1| Candida albicans SC5314 putative L24-like nucle... 44 0.71
27gb|AC080003.6| Homo sapiens BAC clone RP11-344F9 from 4, complet... 44 0.71
28emb|BX470264.22| Zebrafish DNA sequence from clone CH211-252F13 ... 44 0.71
29dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.71
30dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.71
31dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.71
32emb|BX323878.10| Zebrafish DNA sequence from clone CH211-57E23 i... 44 0.71
33emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118... 44 0.71
34gb|AC189000.2| Pan troglodytes BAC clone CH251-539L20 from chrom... 42 2.8
35gb|AE014298.4| Drosophila melanogaster chromosome X, complete se... 42 2.8
36tpe|BN000596.1| TPA_inf: Oryza sativa (japonica cultivar-group) ... 42 2.8
37gb|AC188311.1| Taeniopygia guttata chromosome UNK clone TGMCBa-1... 42 2.8
38gb|AC022351.3| Drosophila melanogaster clone BACR29G15, complete... 42 2.8
39gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.8
40gb|AC079113.4| Homo sapiens BAC clone RP11-81E15 from 7, complet... 42 2.8
41dbj|AB094098.1| Betula maximowicziana DNA, microsatellite Bmax544 42 2.8
42emb|BX957319.7| Zebrafish DNA sequence from clone CH211-113J14 i... 42 2.8
43emb|Z82184.1|HS126G10 Human DNA sequence from clone CITF22-126G1... 42 2.8
44emb|BX470150.13| Zebrafish DNA sequence from clone DKEY-164K14 i... 42 2.8
45emb|AL356266.9| Human DNA sequence from clone RP11-347N5 on chro... 42 2.8
46emb|BX324128.14| Zebrafish DNA sequence from clone DKEY-181O6 in... 42 2.8
47emb|BX936328.7| Zebrafish DNA sequence from clone CH211-11F20 in... 42 2.8
48dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.8
49dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.8
50emb|BX571774.9| Zebrafish DNA sequence from clone DKEY-250A19 in... 42 2.8
51emb|BX927387.9| Zebrafish DNA sequence from clone DKEY-32H20 in ... 42 2.8
52emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 i... 42 2.8
53emb|CR352302.9| Zebrafish DNA sequence from clone DKEY-260C5 in ... 42 2.8
54gb|AC010920.11|AC010920 Drosophila melanogaster, chromosome X, r... 42 2.8
55gb|AC147289.3| Pan troglodytes BAC clone RP43-75A12 from chromos... 42 2.8
56gb|AC146165.2| Pan troglodytes BAC clone RP43-36N14 from chromos... 42 2.8
57emb|BX530098.6| Zebrafish DNA sequence from clone RP71-1G9, comp... 42 2.8
58emb|BX247877.13| Zebrafish DNA sequence from clone DKEY-16J24, c... 42 2.8
59emb|BX248393.5| Zebrafish DNA sequence from clone CH211-233O13, ... 42 2.8
60gb|AC140192.3| Mus musculus BAC clone RP24-377O11 from 6, comple... 42 2.8
61gb|AC140466.3| Mus musculus BAC clone RP24-392F9 from 6, complet... 42 2.8
62emb|AL929150.12| Zebrafish DNA sequence from clone CH211-196H16 ... 42 2.8
63emb|AL928881.4| Zebrafish DNA sequence from clone CH211-180J19, ... 42 2.8

>gb|AY110400.1| Zea mays CL15423_2 mRNA sequence
          Length = 836
 Score =  198 bits (100), Expect = 2e-47
 Identities = 181/208 (87%)
 Strand = Plus / Plus

                                                                       
Query: 156 cgctcgagtccctcgtcgaccaggtgatctccgtcatcaccaacgacggccgcaacatcg 215
           |||||||| | |||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 351 cgctcgagccgctcgtcgaccaggtcatctccgtcatcaccaacgatggccgcaacatcg 410

                                                                       
Query: 216 tgggaactctgcgggggttcgaccaggccaccaacatcatcctcgacgagtcccacgaga 275
           |||| || ||  |||| ||||| |||||||||||||| || |||||||||||||| ||||
Sbjct: 411 tgggtacgctcaggggattcgatcaggccaccaacattatactcgacgagtcccatgaga 470

                                                                       
Query: 276 gggtctactccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggg 335
           ||||||| || |  ||||||||||| ||||| ||||| || || |||||||| |||||||
Sbjct: 471 gggtctattctagaaaggagggagtccaacaacttgttcttggtctgtacattatcaggg 530

                                       
Query: 336 gcgacaacataggcgtggtgggtgaggt 363
           | ||||||||| |||| ||||| |||||
Sbjct: 531 gtgacaacataagcgttgtgggcgaggt 558



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>emb|CT834032.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA019A17, full
           insert sequence
          Length = 674

 Score =  178 bits (90), Expect = 2e-41
 Identities = 180/210 (85%)
 Strand = Plus / Plus

                                                                       
Query: 157 gctcgagtccctcgtcgaccaggtgatctccgtcatcaccaacgacggccgcaacatcgt 216
           |||||| || |||||||||||| | || ||||||||||| ||||| ||||||||||| ||
Sbjct: 131 gctcgaatcgctcgtcgaccagatcatatccgtcatcacaaacgatggccgcaacattgt 190

                                                                       
Query: 217 gggaactctgcgggggttcgaccaggccaccaacatcatcctcgacgagtcccacgagag 276
           ||| || ||  | || ||||| || |||||||||||||||||||| |||||||| |||||
Sbjct: 191 ggggacactcagaggattcgatcaagccaccaacatcatcctcgatgagtcccatgagag 250

                                                                       
Query: 277 ggtctactccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcagggg 336
           |||||| || |||| ||||||||| ||||||||||| || ||  |||||||||| |||||
Sbjct: 251 ggtctattctaccagggagggagtgcaacagcttgttcttgggttgtacatcataagggg 310

                                         
Query: 337 cgacaacataggcgtggtgggtgaggtgga 366
           |||||||||  |||||||||| ||||||||
Sbjct: 311 cgacaacatcagcgtggtgggggaggtgga 340



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>ref|NM_001063045.1| Oryza sativa (japonica cultivar-group) Os05g0594900 (Os05g0594900)
           mRNA, complete cds
          Length = 718

 Score =  178 bits (90), Expect = 2e-41
 Identities = 180/210 (85%)
 Strand = Plus / Plus

                                                                       
Query: 157 gctcgagtccctcgtcgaccaggtgatctccgtcatcaccaacgacggccgcaacatcgt 216
           |||||| || |||||||||||| | || ||||||||||| ||||| ||||||||||| ||
Sbjct: 131 gctcgaatcgctcgtcgaccagatcatatccgtcatcacaaacgatggccgcaacattgt 190

                                                                       
Query: 217 gggaactctgcgggggttcgaccaggccaccaacatcatcctcgacgagtcccacgagag 276
           ||| || ||  | || ||||| || |||||||||||||||||||| |||||||| |||||
Sbjct: 191 ggggacactcagaggattcgatcaagccaccaacatcatcctcgatgagtcccatgagag 250

                                                                       
Query: 277 ggtctactccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcagggg 336
           |||||| || |||| ||||||||| ||||||||||| || ||  |||||||||| |||||
Sbjct: 251 ggtctattctaccagggagggagtgcaacagcttgttcttgggttgtacatcataagggg 310

                                         
Query: 337 cgacaacataggcgtggtgggtgaggtgga 366
           |||||||||  |||||||||| ||||||||
Sbjct: 311 cgacaacatcagcgtggtgggggaggtgga 340



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>dbj|AK121070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061K04, full
           insert sequence
          Length = 720

 Score =  178 bits (90), Expect = 2e-41
 Identities = 180/210 (85%)
 Strand = Plus / Plus

                                                                       
Query: 157 gctcgagtccctcgtcgaccaggtgatctccgtcatcaccaacgacggccgcaacatcgt 216
           |||||| || |||||||||||| | || ||||||||||| ||||| ||||||||||| ||
Sbjct: 133 gctcgaatcgctcgtcgaccagatcatatccgtcatcacaaacgatggccgcaacattgt 192

                                                                       
Query: 217 gggaactctgcgggggttcgaccaggccaccaacatcatcctcgacgagtcccacgagag 276
           ||| || ||  | || ||||| || |||||||||||||||||||| |||||||| |||||
Sbjct: 193 ggggacactcagaggattcgatcaagccaccaacatcatcctcgatgagtcccatgagag 252

                                                                       
Query: 277 ggtctactccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcagggg 336
           |||||| || |||| ||||||||| ||||||||||| || ||  |||||||||| |||||
Sbjct: 253 ggtctattctaccagggagggagtgcaacagcttgttcttgggttgtacatcataagggg 312

                                         
Query: 337 cgacaacataggcgtggtgggtgaggtgga 366
           |||||||||  |||||||||| ||||||||
Sbjct: 313 cgacaacatcagcgtggtgggggaggtgga 342



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>gb|DQ196187.1| Triticum monococcum cultivar DV92 putative small nuclear
            ribonucleoprotein gene, partial cds
          Length = 1205

 Score =  123 bits (62), Expect = 1e-24
 Identities = 72/74 (97%), Gaps = 1/74 (1%)
 Strand = Plus / Minus

                                                                        
Query: 221  actctgcgggggttcgaccaggccaccaacatcatcctcgacgagt-cccacgagagggt 279
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1101 actctgcgggggttcgaccaggccaccaacatcatcctcgacgagtgcccacgagagggt 1042

                          
Query: 280  ctactccaccaagg 293
            ||||||||| ||||
Sbjct: 1041 ctactccactaagg 1028



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>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0030I14, complete sequence
          Length = 159035

 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 233   ttcgaccaggccaccaacatcatcctcgacgagtcccacgagagggtcta 282
             ||||| || |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 51186 ttcgatcaagccaccaacatcatcctcgatgagtcccatgagagggtcta 51235



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 291   aggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaacat 345
             |||||||||| ||||||||||| || ||  |||||||||| ||||||||||||||
Sbjct: 52218 aggagggagtgcaacagcttgttcttgggttgtacatcataaggggcgacaacat 52272



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 185   tccgtcatcaccaacgacggccgcaacatcgtgg 218
             ||||||||||| ||||| ||||||||||| ||||
Sbjct: 51045 tccgtcatcacaaacgatggccgcaacattgtgg 51078



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                  
Query: 233      ttcgaccaggccaccaacatcatcctcgacgagtcccacgagagggtcta 282
                ||||| || |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 29403161 ttcgatcaagccaccaacatcatcctcgatgagtcccatgagagggtcta 29403210



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 291      aggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaacat 345
                |||||||||| ||||||||||| || ||  |||||||||| ||||||||||||||
Sbjct: 29404193 aggagggagtgcaacagcttgttcttgggttgtacatcataaggggcgacaacat 29404247



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 185      tccgtcatcaccaacgacggccgcaacatcgtgg 218
                ||||||||||| ||||| ||||||||||| ||||
Sbjct: 29403020 tccgtcatcacaaacgatggccgcaacattgtgg 29403053



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 25      cctagcgagcgagcgagcgag 45
               |||||||||||||||||||||
Sbjct: 1984966 cctagcgagcgagcgagcgag 1984946



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>ref|NM_001036161.1| Arabidopsis thaliana unknown protein (AT1G65700) mRNA, complete cds
          Length = 578

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343
           ||||| ||||| ||||||||||| | |||  | ||  ||||||||||||| || ||||||
Sbjct: 243 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 302

                                              
Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378
           ||||| ||  | || ||| ||||||||||||||||
Sbjct: 303 ataggtgttatcggggagctggacgaggagcttga 337



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>ref|NM_105244.1| Arabidopsis thaliana unknown protein (AT1G65700) mRNA, complete cds
          Length = 650

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343
           ||||| ||||| ||||||||||| | |||  | ||  ||||||||||||| || ||||||
Sbjct: 284 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 343

                                              
Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378
           ||||| ||  | || ||| ||||||||||||||||
Sbjct: 344 ataggtgttatcggggagctggacgaggagcttga 378



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>gb|AY094059.1| Arabidopsis thaliana At1g65700/F1E22_3 mRNA, complete cds
          Length = 297

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343
           ||||| ||||| ||||||||||| | |||  | ||  ||||||||||||| || ||||||
Sbjct: 145 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 204

                                              
Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378
           ||||| ||  | || ||| ||||||||||||||||
Sbjct: 205 ataggtgttatcggggagctggacgaggagcttga 239



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>gb|AY070767.1| Arabidopsis thaliana At1g65700/F1E22_3 mRNA, complete cds
          Length = 607

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343
           ||||| ||||| ||||||||||| | |||  | ||  ||||||||||||| || ||||||
Sbjct: 276 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 335

                                              
Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378
           ||||| ||  | || ||| ||||||||||||||||
Sbjct: 336 ataggtgttatcggggagctggacgaggagcttga 370



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>gb|AY087015.1| Arabidopsis thaliana clone 30530 mRNA, complete sequence
          Length = 650

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343
           ||||| ||||| ||||||||||| | |||  | ||  ||||||||||||| || ||||||
Sbjct: 284 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 343

                                              
Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378
           ||||| ||  | || ||| ||||||||||||||||
Sbjct: 344 ataggtgttatcggggagctggacgaggagcttga 378



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>emb|BX814351.1|CNS0AEHV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB69ZF09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 614

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343
           ||||| ||||| ||||||||||| | |||  | ||  ||||||||||||| || ||||||
Sbjct: 259 tccacaaaggaaggagtacaacaacatgttttgggtttgtacatcatcagaggggacaac 318

                                              
Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378
           ||||| ||  | || ||| ||||||||||||||||
Sbjct: 319 ataggtgttatcggggagctggacgaggagcttga 353



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>emb|BX817463.1|CNS0ACF1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL24ZE05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 555

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343
           ||||| ||||| ||||||||||| | |||  | ||  ||||||||||||| || ||||||
Sbjct: 266 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 325

                                              
Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378
           ||||| ||  | || ||| ||||||||||||||||
Sbjct: 326 ataggtgttatcggggagctggacgaggagcttga 360



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>emb|BX841891.1|CNS09Y6Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL12ZB12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 611

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343
           ||||| ||||| ||||||||||| | |||  | ||  ||||||||||||| || ||||||
Sbjct: 266 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 325

                                              
Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378
           ||||| ||  | || ||| ||||||||||||||||
Sbjct: 326 ataggtgttatcggggagctggacgaggagcttga 360



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>ref|NM_001049737.1| Oryza sativa (japonica cultivar-group) Os01g0518400
          (Os01g0518400) mRNA, complete cds
          Length = 2383

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 22 aaccctagcgagcgagcgagcgagat 47
          ||||||||||||||||||||||||||
Sbjct: 92 aaccctagcgagcgagcgagcgagat 67



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 22       aaccctagcgagcgagcgagcgagat 47
                ||||||||||||||||||||||||||
Sbjct: 18386423 aaccctagcgagcgagcgagcgagat 18386398



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 22       aaccctagcgagcgagcgagc 42
                |||||||||||||||||||||
Sbjct: 40482095 aaccctagcgagcgagcgagc 40482075



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>dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1003B09
          Length = 155263

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 22    aaccctagcgagcgagcgagcgagat 47
             ||||||||||||||||||||||||||
Sbjct: 10181 aaccctagcgagcgagcgagcgagat 10156



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>dbj|AK069603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024D15,
          full insert sequence
          Length = 2390

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 22 aaccctagcgagcgagcgagcgagat 47
          ||||||||||||||||||||||||||
Sbjct: 94 aaccctagcgagcgagcgagcgagat 69



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>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence
          Length = 118633

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 1     gaagtgaaagtgaaagtgaacaa 23
             |||||||||||||||||||||||
Sbjct: 81421 gaagtgaaagtgaaagtgaacaa 81399



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>gb|AF279873.4| Homo sapiens chromosome 8 clone RP1-25D10, RP1-273G13, RP1-103E7 map
              8p21-p11, complete sequence
          Length = 301232

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 635    atgtgagagagagatacatgtatctct 661
              |||||||||||| ||||||||||||||
Sbjct: 119796 atgtgagagagatatacatgtatctct 119770



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 26       ctagcgagcgagcgagcgagatt 48
                |||||||||||||||||||||||
Sbjct: 23650417 ctagcgagcgagcgagcgagatt 23650439



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>gb|AC019050.4| Homo sapiens BAC clone RP11-92K14 from 2, complete sequence
          Length = 153120

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 640   agagagagatacatgtatctctg 662
             |||||||||||||||||||||||
Sbjct: 24316 agagagagatacatgtatctctg 24294



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>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1127_E01
          Length = 123787

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 26     ctagcgagcgagcgagcgagatt 48
              |||||||||||||||||||||||
Sbjct: 102858 ctagcgagcgagcgagcgagatt 102880



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>ref|XM_707703.1| Candida albicans SC5314 putative L24-like nucleolar rRNA maturation
           factor (CaO19.11668), mRNA
          Length = 630

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 2   aagtgaaagtgaaagtgaacaa 23
           ||||||||||||||||||||||
Sbjct: 555 aagtgaaagtgaaagtgaacaa 576



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>ref|XM_707552.1| Candida albicans SC5314 putative L24-like nucleolar rRNA maturation
           factor (CaO19.4191), mRNA
          Length = 630

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 2   aagtgaaagtgaaagtgaacaa 23
           ||||||||||||||||||||||
Sbjct: 555 aagtgaaagtgaaagtgaacaa 576



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>gb|AC080003.6| Homo sapiens BAC clone RP11-344F9 from 4, complete sequence
          Length = 187936

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 674   aatgaatgaacgaatgaagcaggcaa 699
             |||||||||| |||||||||||||||
Sbjct: 56491 aatgaatgaatgaatgaagcaggcaa 56516



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>emb|BX470264.22| Zebrafish DNA sequence from clone CH211-252F13 in linkage group 7,
              complete sequence
          Length = 168673

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1      gaagtgaaagtgaaagtgaaca 22
              ||||||||||||||||||||||
Sbjct: 135369 gaagtgaaagtgaaagtgaaca 135390



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 29       gcgagcgagcgagcgagattcg 50
                ||||||||||||||||||||||
Sbjct: 19958500 gcgagcgagcgagcgagattcg 19958479



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 584     atgatgaaaacaacatggtttgctgt 609
               ||||||||| ||||||||||||||||
Sbjct: 2172654 atgatgaaagcaacatggtttgctgt 2172679



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>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0535G04
          Length = 154180

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 584   atgatgaaaacaacatggtttgctgt 609
             ||||||||| ||||||||||||||||
Sbjct: 32111 atgatgaaagcaacatggtttgctgt 32136



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>emb|BX323878.10| Zebrafish DNA sequence from clone CH211-57E23 in linkage group 12,
             complete sequence
          Length = 190541

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 674   aatgaatgaacgaatgaagcag 695
             ||||||||||||||||||||||
Sbjct: 82941 aatgaatgaacgaatgaagcag 82962



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>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 165433

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 29    gcgagcgagcgagcgagattcg 50
             ||||||||||||||||||||||
Sbjct: 68760 gcgagcgagcgagcgagattcg 68781



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>gb|AC189000.2| Pan troglodytes BAC clone CH251-539L20 from chromosome 7, complete
             sequence
          Length = 182262

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 673   taatgaatgaacgaatgaagc 693
             |||||||||||||||||||||
Sbjct: 29536 taatgaatgaacgaatgaagc 29516



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>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence
          Length = 22422827

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 26       ctagcgagcgagcgagcgaga 46
                |||||||||||||||||||||
Sbjct: 16395851 ctagcgagcgagcgagcgaga 16395871



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>tpe|BN000596.1| TPA_inf: Oryza sativa (japonica cultivar-group) prx67 gene for
           class III peroxidase 67 precursor, exons 1-2
          Length = 1187

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 25  cctagcgagcgagcgagcgag 45
           |||||||||||||||||||||
Sbjct: 301 cctagcgagcgagcgagcgag 281



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>gb|AC188311.1| Taeniopygia guttata chromosome UNK clone TGMCBa-14H12, complete
             sequence
          Length = 114148

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   gacagcacaaagggggatggc 153
             |||||||||||||||||||||
Sbjct: 21418 gacagcacaaagggggatggc 21438



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>gb|AC022351.3| Drosophila melanogaster clone BACR29G15, complete sequence
          Length = 179396

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    ctagcgagcgagcgagcgaga 46
             |||||||||||||||||||||
Sbjct: 18078 ctagcgagcgagcgagcgaga 18098



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>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07,
             complete sequence
          Length = 151399

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 25    cctagcgagcgagcgagcgag 45
             |||||||||||||||||||||
Sbjct: 77843 cctagcgagcgagcgagcgag 77823



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>gb|AC079113.4| Homo sapiens BAC clone RP11-81E15 from 7, complete sequence
          Length = 94669

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 538  atatctcatatctcataccat 558
            |||||||||||||||||||||
Sbjct: 1712 atatctcatatctcataccat 1732



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>dbj|AB094098.1| Betula maximowicziana DNA, microsatellite Bmax544
          Length = 383

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 28  agcgagcgagcgagcgagatt 48
           |||||||||||||||||||||
Sbjct: 158 agcgagcgagcgagcgagatt 138



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>emb|BX957319.7| Zebrafish DNA sequence from clone CH211-113J14 in linkage group 6,
             complete sequence
          Length = 59626

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 674   aatgaatgaacgaatgaagca 694
             |||||||||||||||||||||
Sbjct: 20463 aatgaatgaacgaatgaagca 20483



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>emb|Z82184.1|HS126G10 Human DNA sequence from clone CITF22-126G10 on chromosome 22, complete
             sequence
          Length = 34217

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 674   aatgaatgaacgaatgaagcaggca 698
             |||||||||| ||||||||||||||
Sbjct: 30344 aatgaatgaatgaatgaagcaggca 30368



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>emb|BX470150.13| Zebrafish DNA sequence from clone DKEY-164K14 in linkage group 23,
              complete sequence
          Length = 209342

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 589    gaaaacaacatggtttgctgt 609
              |||||||||||||||||||||
Sbjct: 119598 gaaaacaacatggtttgctgt 119618



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>emb|AL356266.9| Human DNA sequence from clone RP11-347N5 on chromosome 13 Contains a
            ribosomal protein L39 (RPL39) pseudogene and the 3' end
            of a novel gene, complete sequence
          Length = 105247

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 675  atgaatgaacgaatgaagcag 695
            |||||||||||||||||||||
Sbjct: 2550 atgaatgaacgaatgaagcag 2570



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>emb|BX324128.14| Zebrafish DNA sequence from clone DKEY-181O6 in linkage group 19,
              complete sequence
          Length = 139695

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 674    aatgaatgaacgaatgaagca 694
              |||||||||||||||||||||
Sbjct: 128171 aatgaatgaacgaatgaagca 128191



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>emb|BX936328.7| Zebrafish DNA sequence from clone CH211-11F20 in linkage group 18,
             complete sequence
          Length = 113038

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     aagtgaaagtgaaagtgaaca 22
             |||||||||||||||||||||
Sbjct: 45746 aagtgaaagtgaaagtgaaca 45766



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>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0592G05
          Length = 146220

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 22     aaccctagcgagcgagcgagc 42
              |||||||||||||||||||||
Sbjct: 133336 aaccctagcgagcgagcgagc 133316



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>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1033B05
          Length = 138882

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    aaccctagcgagcgagcgagc 42
             |||||||||||||||||||||
Sbjct: 43719 aaccctagcgagcgagcgagc 43699



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>emb|BX571774.9| Zebrafish DNA sequence from clone DKEY-250A19 in linkage group 9,
              complete sequence
          Length = 140812

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 2      aagtgaaagtgaaagtgaaca 22
              |||||||||||||||||||||
Sbjct: 138914 aagtgaaagtgaaagtgaaca 138894



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>emb|BX927387.9| Zebrafish DNA sequence from clone DKEY-32H20 in linkage group 6, complete
              sequence
          Length = 175517

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 674    aatgaatgaacgaatgaagca 694
              |||||||||||||||||||||
Sbjct: 100937 aatgaatgaacgaatgaagca 100957



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>emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 in linkage group 9,
           complete sequence
          Length = 137898

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 2   aagtgaaagtgaaagtgaaca 22
           |||||||||||||||||||||
Sbjct: 102 aagtgaaagtgaaagtgaaca 82



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>emb|CR352302.9| Zebrafish DNA sequence from clone DKEY-260C5 in linkage group 19,
             complete sequence
          Length = 146664

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 674   aatgaatgaacgaatgaagca 694
             |||||||||||||||||||||
Sbjct: 96345 aatgaatgaacgaatgaagca 96325



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>gb|AC010920.11|AC010920 Drosophila melanogaster, chromosome X, region 14C-14D, BAC clone
              BACR47D09, complete sequence
          Length = 166935

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     ctagcgagcgagcgagcgaga 46
              |||||||||||||||||||||
Sbjct: 149729 ctagcgagcgagcgagcgaga 149749



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>gb|AC147289.3| Pan troglodytes BAC clone RP43-75A12 from chromosome 7, complete sequence
          Length = 178199

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 538    atatctcatatctcataccat 558
              |||||||||||||||||||||
Sbjct: 119480 atatctcatatctcataccat 119500



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>gb|AC146165.2| Pan troglodytes BAC clone RP43-36N14 from chromosome 7, complete
             sequence
          Length = 159324

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 673   taatgaatgaacgaatgaagc 693
             |||||||||||||||||||||
Sbjct: 10129 taatgaatgaacgaatgaagc 10149



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>emb|BX530098.6| Zebrafish DNA sequence from clone RP71-1G9, complete sequence
          Length = 156637

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 634   tatgtgagagagagatacatg 654
             |||||||||||||||||||||
Sbjct: 27646 tatgtgagagagagatacatg 27626



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>emb|BX247877.13| Zebrafish DNA sequence from clone DKEY-16J24, complete sequence
          Length = 189537

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     aagtgaaagtgaaagtgaaca 22
             |||||||||||||||||||||
Sbjct: 99778 aagtgaaagtgaaagtgaaca 99798



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>emb|BX248393.5| Zebrafish DNA sequence from clone CH211-233O13, complete sequence
          Length = 166286

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 674   aatgaatgaacgaatgaagcaggcaatta 702
             |||||||||| ||||||||||| ||||||
Sbjct: 93843 aatgaatgaatgaatgaagcagtcaatta 93871



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>gb|AC140192.3| Mus musculus BAC clone RP24-377O11 from 6, complete sequence
          Length = 160574

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 636   tgtgagagagagatacatgta 656
             |||||||||||||||||||||
Sbjct: 57220 tgtgagagagagatacatgta 57200



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>gb|AC140466.3| Mus musculus BAC clone RP24-392F9 from 6, complete sequence
          Length = 148392

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 636    tgtgagagagagatacatgta 656
              |||||||||||||||||||||
Sbjct: 133003 tgtgagagagagatacatgta 132983



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>emb|AL929150.12| Zebrafish DNA sequence from clone CH211-196H16 in linkage group 1,
              complete sequence
          Length = 229480

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 674    aatgaatgaacgaatgaagca 694
              |||||||||||||||||||||
Sbjct: 210926 aatgaatgaacgaatgaagca 210906



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>emb|AL928881.4| Zebrafish DNA sequence from clone CH211-180J19, complete sequence
          Length = 150077

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     aagtgaaagtgaaagtgaaca 22
             |||||||||||||||||||||
Sbjct: 25820 aagtgaaagtgaaagtgaaca 25800


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 111,332,231
Number of extensions: 5845154
Number of successful extensions: 137297
Number of sequences better than 10.0: 63
Number of HSP's gapped: 137266
Number of HSP's successfully gapped: 69
Length of query: 744
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 722
Effective length of database: 18,508,616,841
Effective search space: 13363221359202
Effective search space used: 13363221359202
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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