| Clone Name | FLbaf38c03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY110400.1| Zea mays CL15423_2 mRNA sequence Length = 836 Score = 198 bits (100), Expect = 2e-47 Identities = 181/208 (87%) Strand = Plus / Plus Query: 156 cgctcgagtccctcgtcgaccaggtgatctccgtcatcaccaacgacggccgcaacatcg 215 |||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 351 cgctcgagccgctcgtcgaccaggtcatctccgtcatcaccaacgatggccgcaacatcg 410 Query: 216 tgggaactctgcgggggttcgaccaggccaccaacatcatcctcgacgagtcccacgaga 275 |||| || || |||| ||||| |||||||||||||| || |||||||||||||| |||| Sbjct: 411 tgggtacgctcaggggattcgatcaggccaccaacattatactcgacgagtcccatgaga 470 Query: 276 gggtctactccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggg 335 ||||||| || | ||||||||||| ||||| ||||| || || |||||||| ||||||| Sbjct: 471 gggtctattctagaaaggagggagtccaacaacttgttcttggtctgtacattatcaggg 530 Query: 336 gcgacaacataggcgtggtgggtgaggt 363 | ||||||||| |||| ||||| ||||| Sbjct: 531 gtgacaacataagcgttgtgggcgaggt 558
>emb|CT834032.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA019A17, full insert sequence Length = 674 Score = 178 bits (90), Expect = 2e-41 Identities = 180/210 (85%) Strand = Plus / Plus Query: 157 gctcgagtccctcgtcgaccaggtgatctccgtcatcaccaacgacggccgcaacatcgt 216 |||||| || |||||||||||| | || ||||||||||| ||||| ||||||||||| || Sbjct: 131 gctcgaatcgctcgtcgaccagatcatatccgtcatcacaaacgatggccgcaacattgt 190 Query: 217 gggaactctgcgggggttcgaccaggccaccaacatcatcctcgacgagtcccacgagag 276 ||| || || | || ||||| || |||||||||||||||||||| |||||||| ||||| Sbjct: 191 ggggacactcagaggattcgatcaagccaccaacatcatcctcgatgagtcccatgagag 250 Query: 277 ggtctactccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcagggg 336 |||||| || |||| ||||||||| ||||||||||| || || |||||||||| ||||| Sbjct: 251 ggtctattctaccagggagggagtgcaacagcttgttcttgggttgtacatcataagggg 310 Query: 337 cgacaacataggcgtggtgggtgaggtgga 366 ||||||||| |||||||||| |||||||| Sbjct: 311 cgacaacatcagcgtggtgggggaggtgga 340
>ref|NM_001063045.1| Oryza sativa (japonica cultivar-group) Os05g0594900 (Os05g0594900) mRNA, complete cds Length = 718 Score = 178 bits (90), Expect = 2e-41 Identities = 180/210 (85%) Strand = Plus / Plus Query: 157 gctcgagtccctcgtcgaccaggtgatctccgtcatcaccaacgacggccgcaacatcgt 216 |||||| || |||||||||||| | || ||||||||||| ||||| ||||||||||| || Sbjct: 131 gctcgaatcgctcgtcgaccagatcatatccgtcatcacaaacgatggccgcaacattgt 190 Query: 217 gggaactctgcgggggttcgaccaggccaccaacatcatcctcgacgagtcccacgagag 276 ||| || || | || ||||| || |||||||||||||||||||| |||||||| ||||| Sbjct: 191 ggggacactcagaggattcgatcaagccaccaacatcatcctcgatgagtcccatgagag 250 Query: 277 ggtctactccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcagggg 336 |||||| || |||| ||||||||| ||||||||||| || || |||||||||| ||||| Sbjct: 251 ggtctattctaccagggagggagtgcaacagcttgttcttgggttgtacatcataagggg 310 Query: 337 cgacaacataggcgtggtgggtgaggtgga 366 ||||||||| |||||||||| |||||||| Sbjct: 311 cgacaacatcagcgtggtgggggaggtgga 340
>dbj|AK121070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061K04, full insert sequence Length = 720 Score = 178 bits (90), Expect = 2e-41 Identities = 180/210 (85%) Strand = Plus / Plus Query: 157 gctcgagtccctcgtcgaccaggtgatctccgtcatcaccaacgacggccgcaacatcgt 216 |||||| || |||||||||||| | || ||||||||||| ||||| ||||||||||| || Sbjct: 133 gctcgaatcgctcgtcgaccagatcatatccgtcatcacaaacgatggccgcaacattgt 192 Query: 217 gggaactctgcgggggttcgaccaggccaccaacatcatcctcgacgagtcccacgagag 276 ||| || || | || ||||| || |||||||||||||||||||| |||||||| ||||| Sbjct: 193 ggggacactcagaggattcgatcaagccaccaacatcatcctcgatgagtcccatgagag 252 Query: 277 ggtctactccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcagggg 336 |||||| || |||| ||||||||| ||||||||||| || || |||||||||| ||||| Sbjct: 253 ggtctattctaccagggagggagtgcaacagcttgttcttgggttgtacatcataagggg 312 Query: 337 cgacaacataggcgtggtgggtgaggtgga 366 ||||||||| |||||||||| |||||||| Sbjct: 313 cgacaacatcagcgtggtgggggaggtgga 342
>gb|DQ196187.1| Triticum monococcum cultivar DV92 putative small nuclear ribonucleoprotein gene, partial cds Length = 1205 Score = 123 bits (62), Expect = 1e-24 Identities = 72/74 (97%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 221 actctgcgggggttcgaccaggccaccaacatcatcctcgacgagt-cccacgagagggt 279 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1101 actctgcgggggttcgaccaggccaccaacatcatcctcgacgagtgcccacgagagggt 1042 Query: 280 ctactccaccaagg 293 ||||||||| |||| Sbjct: 1041 ctactccactaagg 1028
>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0030I14, complete sequence Length = 159035 Score = 67.9 bits (34), Expect = 5e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 233 ttcgaccaggccaccaacatcatcctcgacgagtcccacgagagggtcta 282 ||||| || |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 51186 ttcgatcaagccaccaacatcatcctcgatgagtcccatgagagggtcta 51235 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 291 aggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaacat 345 |||||||||| ||||||||||| || || |||||||||| |||||||||||||| Sbjct: 52218 aggagggagtgcaacagcttgttcttgggttgtacatcataaggggcgacaacat 52272 Score = 44.1 bits (22), Expect = 0.71 Identities = 31/34 (91%) Strand = Plus / Plus Query: 185 tccgtcatcaccaacgacggccgcaacatcgtgg 218 ||||||||||| ||||| ||||||||||| |||| Sbjct: 51045 tccgtcatcacaaacgatggccgcaacattgtgg 51078
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 67.9 bits (34), Expect = 5e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 233 ttcgaccaggccaccaacatcatcctcgacgagtcccacgagagggtcta 282 ||||| || |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 29403161 ttcgatcaagccaccaacatcatcctcgatgagtcccatgagagggtcta 29403210 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 291 aggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaacat 345 |||||||||| ||||||||||| || || |||||||||| |||||||||||||| Sbjct: 29404193 aggagggagtgcaacagcttgttcttgggttgtacatcataaggggcgacaacat 29404247 Score = 44.1 bits (22), Expect = 0.71 Identities = 31/34 (91%) Strand = Plus / Plus Query: 185 tccgtcatcaccaacgacggccgcaacatcgtgg 218 ||||||||||| ||||| ||||||||||| |||| Sbjct: 29403020 tccgtcatcacaaacgatggccgcaacattgtgg 29403053 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 cctagcgagcgagcgagcgag 45 ||||||||||||||||||||| Sbjct: 1984966 cctagcgagcgagcgagcgag 1984946
>ref|NM_001036161.1| Arabidopsis thaliana unknown protein (AT1G65700) mRNA, complete cds Length = 578 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343 ||||| ||||| ||||||||||| | ||| | || ||||||||||||| || |||||| Sbjct: 243 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 302 Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378 ||||| || | || ||| |||||||||||||||| Sbjct: 303 ataggtgttatcggggagctggacgaggagcttga 337
>ref|NM_105244.1| Arabidopsis thaliana unknown protein (AT1G65700) mRNA, complete cds Length = 650 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343 ||||| ||||| ||||||||||| | ||| | || ||||||||||||| || |||||| Sbjct: 284 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 343 Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378 ||||| || | || ||| |||||||||||||||| Sbjct: 344 ataggtgttatcggggagctggacgaggagcttga 378
>gb|AY094059.1| Arabidopsis thaliana At1g65700/F1E22_3 mRNA, complete cds Length = 297 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343 ||||| ||||| ||||||||||| | ||| | || ||||||||||||| || |||||| Sbjct: 145 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 204 Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378 ||||| || | || ||| |||||||||||||||| Sbjct: 205 ataggtgttatcggggagctggacgaggagcttga 239
>gb|AY070767.1| Arabidopsis thaliana At1g65700/F1E22_3 mRNA, complete cds Length = 607 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343 ||||| ||||| ||||||||||| | ||| | || ||||||||||||| || |||||| Sbjct: 276 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 335 Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378 ||||| || | || ||| |||||||||||||||| Sbjct: 336 ataggtgttatcggggagctggacgaggagcttga 370
>gb|AY087015.1| Arabidopsis thaliana clone 30530 mRNA, complete sequence Length = 650 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343 ||||| ||||| ||||||||||| | ||| | || ||||||||||||| || |||||| Sbjct: 284 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 343 Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378 ||||| || | || ||| |||||||||||||||| Sbjct: 344 ataggtgttatcggggagctggacgaggagcttga 378
>emb|BX814351.1|CNS0AEHV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZF09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 614 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343 ||||| ||||| ||||||||||| | ||| | || ||||||||||||| || |||||| Sbjct: 259 tccacaaaggaaggagtacaacaacatgttttgggtttgtacatcatcagaggggacaac 318 Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378 ||||| || | || ||| |||||||||||||||| Sbjct: 319 ataggtgttatcggggagctggacgaggagcttga 353
>emb|BX817463.1|CNS0ACF1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL24ZE05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 555 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343 ||||| ||||| ||||||||||| | ||| | || ||||||||||||| || |||||| Sbjct: 266 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 325 Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378 ||||| || | || ||| |||||||||||||||| Sbjct: 326 ataggtgttatcggggagctggacgaggagcttga 360
>emb|BX841891.1|CNS09Y6Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZB12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 611 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 284 tccaccaaggagggagtacaacagcttgtcctcggactgtacatcatcaggggcgacaac 343 ||||| ||||| ||||||||||| | ||| | || ||||||||||||| || |||||| Sbjct: 266 tccacaaaggaaggagtacaacaacatgtgttgggtttgtacatcatcagaggggacaac 325 Query: 344 ataggcgtggtgggtgaggtggacgaggagcttga 378 ||||| || | || ||| |||||||||||||||| Sbjct: 326 ataggtgttatcggggagctggacgaggagcttga 360
>ref|NM_001049737.1| Oryza sativa (japonica cultivar-group) Os01g0518400 (Os01g0518400) mRNA, complete cds Length = 2383 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 22 aaccctagcgagcgagcgagcgagat 47 |||||||||||||||||||||||||| Sbjct: 92 aaccctagcgagcgagcgagcgagat 67
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 22 aaccctagcgagcgagcgagcgagat 47 |||||||||||||||||||||||||| Sbjct: 18386423 aaccctagcgagcgagcgagcgagat 18386398 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 aaccctagcgagcgagcgagc 42 ||||||||||||||||||||| Sbjct: 40482095 aaccctagcgagcgagcgagc 40482075
>dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1003B09 Length = 155263 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 22 aaccctagcgagcgagcgagcgagat 47 |||||||||||||||||||||||||| Sbjct: 10181 aaccctagcgagcgagcgagcgagat 10156
>dbj|AK069603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024D15, full insert sequence Length = 2390 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 22 aaccctagcgagcgagcgagcgagat 47 |||||||||||||||||||||||||| Sbjct: 94 aaccctagcgagcgagcgagcgagat 69
>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence Length = 118633 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gaagtgaaagtgaaagtgaacaa 23 ||||||||||||||||||||||| Sbjct: 81421 gaagtgaaagtgaaagtgaacaa 81399
>gb|AF279873.4| Homo sapiens chromosome 8 clone RP1-25D10, RP1-273G13, RP1-103E7 map 8p21-p11, complete sequence Length = 301232 Score = 46.1 bits (23), Expect = 0.18 Identities = 26/27 (96%) Strand = Plus / Minus Query: 635 atgtgagagagagatacatgtatctct 661 |||||||||||| |||||||||||||| Sbjct: 119796 atgtgagagagatatacatgtatctct 119770
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 ctagcgagcgagcgagcgagatt 48 ||||||||||||||||||||||| Sbjct: 23650417 ctagcgagcgagcgagcgagatt 23650439
>gb|AC019050.4| Homo sapiens BAC clone RP11-92K14 from 2, complete sequence Length = 153120 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 640 agagagagatacatgtatctctg 662 ||||||||||||||||||||||| Sbjct: 24316 agagagagatacatgtatctctg 24294
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 ctagcgagcgagcgagcgagatt 48 ||||||||||||||||||||||| Sbjct: 102858 ctagcgagcgagcgagcgagatt 102880
>ref|XM_707703.1| Candida albicans SC5314 putative L24-like nucleolar rRNA maturation factor (CaO19.11668), mRNA Length = 630 Score = 44.1 bits (22), Expect = 0.71 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 aagtgaaagtgaaagtgaacaa 23 |||||||||||||||||||||| Sbjct: 555 aagtgaaagtgaaagtgaacaa 576
>ref|XM_707552.1| Candida albicans SC5314 putative L24-like nucleolar rRNA maturation factor (CaO19.4191), mRNA Length = 630 Score = 44.1 bits (22), Expect = 0.71 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 aagtgaaagtgaaagtgaacaa 23 |||||||||||||||||||||| Sbjct: 555 aagtgaaagtgaaagtgaacaa 576
>gb|AC080003.6| Homo sapiens BAC clone RP11-344F9 from 4, complete sequence Length = 187936 Score = 44.1 bits (22), Expect = 0.71 Identities = 25/26 (96%) Strand = Plus / Plus Query: 674 aatgaatgaacgaatgaagcaggcaa 699 |||||||||| ||||||||||||||| Sbjct: 56491 aatgaatgaatgaatgaagcaggcaa 56516
>emb|BX470264.22| Zebrafish DNA sequence from clone CH211-252F13 in linkage group 7, complete sequence Length = 168673 Score = 44.1 bits (22), Expect = 0.71 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaagtgaaagtgaaagtgaaca 22 |||||||||||||||||||||| Sbjct: 135369 gaagtgaaagtgaaagtgaaca 135390
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 0.71 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 gcgagcgagcgagcgagattcg 50 |||||||||||||||||||||| Sbjct: 19958500 gcgagcgagcgagcgagattcg 19958479
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 0.71 Identities = 25/26 (96%) Strand = Plus / Plus Query: 584 atgatgaaaacaacatggtttgctgt 609 ||||||||| |||||||||||||||| Sbjct: 2172654 atgatgaaagcaacatggtttgctgt 2172679
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0535G04 Length = 154180 Score = 44.1 bits (22), Expect = 0.71 Identities = 25/26 (96%) Strand = Plus / Plus Query: 584 atgatgaaaacaacatggtttgctgt 609 ||||||||| |||||||||||||||| Sbjct: 32111 atgatgaaagcaacatggtttgctgt 32136
>emb|BX323878.10| Zebrafish DNA sequence from clone CH211-57E23 in linkage group 12, complete sequence Length = 190541 Score = 44.1 bits (22), Expect = 0.71 Identities = 22/22 (100%) Strand = Plus / Plus Query: 674 aatgaatgaacgaatgaagcag 695 |||||||||||||||||||||| Sbjct: 82941 aatgaatgaacgaatgaagcag 82962
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 44.1 bits (22), Expect = 0.71 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 gcgagcgagcgagcgagattcg 50 |||||||||||||||||||||| Sbjct: 68760 gcgagcgagcgagcgagattcg 68781
>gb|AC189000.2| Pan troglodytes BAC clone CH251-539L20 from chromosome 7, complete sequence Length = 182262 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 673 taatgaatgaacgaatgaagc 693 ||||||||||||||||||||| Sbjct: 29536 taatgaatgaacgaatgaagc 29516
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctagcgagcgagcgagcgaga 46 ||||||||||||||||||||| Sbjct: 16395851 ctagcgagcgagcgagcgaga 16395871
>tpe|BN000596.1| TPA_inf: Oryza sativa (japonica cultivar-group) prx67 gene for class III peroxidase 67 precursor, exons 1-2 Length = 1187 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 cctagcgagcgagcgagcgag 45 ||||||||||||||||||||| Sbjct: 301 cctagcgagcgagcgagcgag 281
>gb|AC188311.1| Taeniopygia guttata chromosome UNK clone TGMCBa-14H12, complete sequence Length = 114148 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gacagcacaaagggggatggc 153 ||||||||||||||||||||| Sbjct: 21418 gacagcacaaagggggatggc 21438
>gb|AC022351.3| Drosophila melanogaster clone BACR29G15, complete sequence Length = 179396 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctagcgagcgagcgagcgaga 46 ||||||||||||||||||||| Sbjct: 18078 ctagcgagcgagcgagcgaga 18098
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 cctagcgagcgagcgagcgag 45 ||||||||||||||||||||| Sbjct: 77843 cctagcgagcgagcgagcgag 77823
>gb|AC079113.4| Homo sapiens BAC clone RP11-81E15 from 7, complete sequence Length = 94669 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 atatctcatatctcataccat 558 ||||||||||||||||||||| Sbjct: 1712 atatctcatatctcataccat 1732
>dbj|AB094098.1| Betula maximowicziana DNA, microsatellite Bmax544 Length = 383 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 agcgagcgagcgagcgagatt 48 ||||||||||||||||||||| Sbjct: 158 agcgagcgagcgagcgagatt 138
>emb|BX957319.7| Zebrafish DNA sequence from clone CH211-113J14 in linkage group 6, complete sequence Length = 59626 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 674 aatgaatgaacgaatgaagca 694 ||||||||||||||||||||| Sbjct: 20463 aatgaatgaacgaatgaagca 20483
>emb|Z82184.1|HS126G10 Human DNA sequence from clone CITF22-126G10 on chromosome 22, complete sequence Length = 34217 Score = 42.1 bits (21), Expect = 2.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 674 aatgaatgaacgaatgaagcaggca 698 |||||||||| |||||||||||||| Sbjct: 30344 aatgaatgaatgaatgaagcaggca 30368
>emb|BX470150.13| Zebrafish DNA sequence from clone DKEY-164K14 in linkage group 23, complete sequence Length = 209342 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 589 gaaaacaacatggtttgctgt 609 ||||||||||||||||||||| Sbjct: 119598 gaaaacaacatggtttgctgt 119618
>emb|AL356266.9| Human DNA sequence from clone RP11-347N5 on chromosome 13 Contains a ribosomal protein L39 (RPL39) pseudogene and the 3' end of a novel gene, complete sequence Length = 105247 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 675 atgaatgaacgaatgaagcag 695 ||||||||||||||||||||| Sbjct: 2550 atgaatgaacgaatgaagcag 2570
>emb|BX324128.14| Zebrafish DNA sequence from clone DKEY-181O6 in linkage group 19, complete sequence Length = 139695 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 674 aatgaatgaacgaatgaagca 694 ||||||||||||||||||||| Sbjct: 128171 aatgaatgaacgaatgaagca 128191
>emb|BX936328.7| Zebrafish DNA sequence from clone CH211-11F20 in linkage group 18, complete sequence Length = 113038 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 aagtgaaagtgaaagtgaaca 22 ||||||||||||||||||||| Sbjct: 45746 aagtgaaagtgaaagtgaaca 45766
>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0592G05 Length = 146220 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 aaccctagcgagcgagcgagc 42 ||||||||||||||||||||| Sbjct: 133336 aaccctagcgagcgagcgagc 133316
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 aaccctagcgagcgagcgagc 42 ||||||||||||||||||||| Sbjct: 43719 aaccctagcgagcgagcgagc 43699
>emb|BX571774.9| Zebrafish DNA sequence from clone DKEY-250A19 in linkage group 9, complete sequence Length = 140812 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 aagtgaaagtgaaagtgaaca 22 ||||||||||||||||||||| Sbjct: 138914 aagtgaaagtgaaagtgaaca 138894
>emb|BX927387.9| Zebrafish DNA sequence from clone DKEY-32H20 in linkage group 6, complete sequence Length = 175517 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 674 aatgaatgaacgaatgaagca 694 ||||||||||||||||||||| Sbjct: 100937 aatgaatgaacgaatgaagca 100957
>emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 in linkage group 9, complete sequence Length = 137898 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 aagtgaaagtgaaagtgaaca 22 ||||||||||||||||||||| Sbjct: 102 aagtgaaagtgaaagtgaaca 82
>emb|CR352302.9| Zebrafish DNA sequence from clone DKEY-260C5 in linkage group 19, complete sequence Length = 146664 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 674 aatgaatgaacgaatgaagca 694 ||||||||||||||||||||| Sbjct: 96345 aatgaatgaacgaatgaagca 96325
>gb|AC010920.11|AC010920 Drosophila melanogaster, chromosome X, region 14C-14D, BAC clone BACR47D09, complete sequence Length = 166935 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctagcgagcgagcgagcgaga 46 ||||||||||||||||||||| Sbjct: 149729 ctagcgagcgagcgagcgaga 149749
>gb|AC147289.3| Pan troglodytes BAC clone RP43-75A12 from chromosome 7, complete sequence Length = 178199 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 atatctcatatctcataccat 558 ||||||||||||||||||||| Sbjct: 119480 atatctcatatctcataccat 119500
>gb|AC146165.2| Pan troglodytes BAC clone RP43-36N14 from chromosome 7, complete sequence Length = 159324 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 673 taatgaatgaacgaatgaagc 693 ||||||||||||||||||||| Sbjct: 10129 taatgaatgaacgaatgaagc 10149
>emb|BX530098.6| Zebrafish DNA sequence from clone RP71-1G9, complete sequence Length = 156637 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 634 tatgtgagagagagatacatg 654 ||||||||||||||||||||| Sbjct: 27646 tatgtgagagagagatacatg 27626
>emb|BX247877.13| Zebrafish DNA sequence from clone DKEY-16J24, complete sequence Length = 189537 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 aagtgaaagtgaaagtgaaca 22 ||||||||||||||||||||| Sbjct: 99778 aagtgaaagtgaaagtgaaca 99798
>emb|BX248393.5| Zebrafish DNA sequence from clone CH211-233O13, complete sequence Length = 166286 Score = 42.1 bits (21), Expect = 2.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 674 aatgaatgaacgaatgaagcaggcaatta 702 |||||||||| ||||||||||| |||||| Sbjct: 93843 aatgaatgaatgaatgaagcagtcaatta 93871
>gb|AC140192.3| Mus musculus BAC clone RP24-377O11 from 6, complete sequence Length = 160574 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 636 tgtgagagagagatacatgta 656 ||||||||||||||||||||| Sbjct: 57220 tgtgagagagagatacatgta 57200
>gb|AC140466.3| Mus musculus BAC clone RP24-392F9 from 6, complete sequence Length = 148392 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 636 tgtgagagagagatacatgta 656 ||||||||||||||||||||| Sbjct: 133003 tgtgagagagagatacatgta 132983
>emb|AL929150.12| Zebrafish DNA sequence from clone CH211-196H16 in linkage group 1, complete sequence Length = 229480 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 674 aatgaatgaacgaatgaagca 694 ||||||||||||||||||||| Sbjct: 210926 aatgaatgaacgaatgaagca 210906
>emb|AL928881.4| Zebrafish DNA sequence from clone CH211-180J19, complete sequence Length = 150077 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 aagtgaaagtgaaagtgaaca 22 ||||||||||||||||||||| Sbjct: 25820 aagtgaaagtgaaagtgaaca 25800 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 111,332,231 Number of extensions: 5845154 Number of successful extensions: 137297 Number of sequences better than 10.0: 63 Number of HSP's gapped: 137266 Number of HSP's successfully gapped: 69 Length of query: 744 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 722 Effective length of database: 18,508,616,841 Effective search space: 13363221359202 Effective search space used: 13363221359202 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)