ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf38b22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT831965.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA034A20, full insert sequence Length = 1404 Score = 163 bits (82), Expect = 1e-36 Identities = 154/178 (86%) Strand = Plus / Plus Query: 2 ggcgtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcga 61 |||||||||||| || || ||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 769 ggcgtggcaggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcga 828 Query: 62 cgggcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaa 121 ||| |||| ||||| |||||||| || | ||| |||||| ||||| ||||||||||| Sbjct: 829 cggccaggcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaa 888 Query: 122 cgccgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 ||||||||| || |||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 889 cgccgtcccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 946 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 455 ttgattaaccgatgccgccttgtatcacccgcc 487 ||||||||| || |||||||||||||||||||| Sbjct: 1209 ttgattaacagaggccgccttgtatcacccgcc 1241 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 262 tggagcgtgctgggaagcgccatggttttatggttggt 299 |||| |||||||||||| ||||| |||||||| ||||| Sbjct: 1001 tggaccgtgctgggaagtgccattgttttatgattggt 1038
>ref|NM_001054636.1| Oryza sativa (japonica cultivar-group) Os02g0744200 (Os02g0744200) mRNA, complete cds Length = 1415 Score = 163 bits (82), Expect = 1e-36 Identities = 154/178 (86%) Strand = Plus / Plus Query: 2 ggcgtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcga 61 |||||||||||| || || ||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 777 ggcgtggcaggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcga 836 Query: 62 cgggcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaa 121 ||| |||| ||||| |||||||| || | ||| |||||| ||||| ||||||||||| Sbjct: 837 cggtcaggcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaa 896 Query: 122 cgccgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 ||||||||| || |||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 897 cgccgtcccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 954 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 262 tggagcgtgctgggaagcgccatggttttatggttggt 299 |||| |||||||||||| ||||| |||||||| ||||| Sbjct: 1009 tggaccgtgctgggaagtgccattgttttatgattggt 1046 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 ttgattaaccgatgccgccttgtatcacccgcc 487 |||||| || || |||||||||||||||||||| Sbjct: 1217 ttgattgacagaggccgccttgtatcacccgcc 1249
>gb|AF247162.1| Oryza sativa alpha-expansin OsEXPA5 mRNA, complete cds Length = 1412 Score = 163 bits (82), Expect = 1e-36 Identities = 154/178 (86%) Strand = Plus / Plus Query: 2 ggcgtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcga 61 |||||||||||| || || ||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 750 ggcgtggcaggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcga 809 Query: 62 cgggcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaa 121 ||| |||| ||||| |||||||| || | ||| |||||| ||||| ||||||||||| Sbjct: 810 cggtcaggcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaa 869 Query: 122 cgccgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 ||||||||| || |||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 870 cgccgtcccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 927 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 262 tggagcgtgctgggaagcgccatggttttatggttggt 299 |||| |||||||||||| ||||| |||||||| ||||| Sbjct: 982 tggaccgtgctgggaagtgccattgttttatgattggt 1019 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 ttgattaaccgatgccgccttgtatcacccgcc 487 |||||| || || |||||||||||||||||||| Sbjct: 1190 ttgattgacagaggccgccttgtatcacccgcc 1222
>gb|AF394546.1| Oryza sativa alpha-expansin OsEXPA5 (EXPA5) gene, complete cds Length = 6774 Score = 163 bits (82), Expect = 1e-36 Identities = 154/178 (86%) Strand = Plus / Plus Query: 2 ggcgtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcga 61 |||||||||||| || || ||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 5141 ggcgtggcaggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcga 5200 Query: 62 cgggcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaa 121 ||| |||| ||||| |||||||| || | ||| |||||| ||||| ||||||||||| Sbjct: 5201 cggtcaggcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaa 5260 Query: 122 cgccgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 ||||||||| || |||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 5261 cgccgtcccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 5318 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 262 tggagcgtgctgggaagcgccatggttttatggttggt 299 |||| |||||||||||| ||||| |||||||| ||||| Sbjct: 5373 tggaccgtgctgggaagtgccattgttttatgattggt 5410 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 ttgattaaccgatgccgccttgtatcacccgcc 487 |||||| || || |||||||||||||||||||| Sbjct: 5581 ttgattgacagaggccgccttgtatcacccgcc 5613
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 163 bits (82), Expect = 1e-36 Identities = 154/178 (86%) Strand = Plus / Plus Query: 2 ggcgtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcga 61 |||||||||||| || || ||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 31240027 ggcgtggcaggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcga 31240086 Query: 62 cgggcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaa 121 ||| |||| ||||| |||||||| || | ||| |||||| ||||| ||||||||||| Sbjct: 31240087 cggtcaggcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaa 31240146 Query: 122 cgccgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 ||||||||| || |||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 31240147 cgccgtcccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 31240204 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 262 tggagcgtgctgggaagcgccatggttttatggttggt 299 |||| |||||||||||| ||||| |||||||| ||||| Sbjct: 31240259 tggaccgtgctgggaagtgccattgttttatgattggt 31240296 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 ttgattaaccgatgccgccttgtatcacccgcc 487 |||||| || || |||||||||||||||||||| Sbjct: 31240467 ttgattgacagaggccgccttgtatcacccgcc 31240499
>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1734_E02 Length = 168566 Score = 163 bits (82), Expect = 1e-36 Identities = 154/178 (86%) Strand = Plus / Plus Query: 2 ggcgtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcga 61 |||||||||||| || || ||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 119870 ggcgtggcaggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcga 119929 Query: 62 cgggcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaa 121 ||| |||| ||||| |||||||| || | ||| |||||| ||||| ||||||||||| Sbjct: 119930 cggtcaggcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaa 119989 Query: 122 cgccgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 ||||||||| || |||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 119990 cgccgtcccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 120047 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 262 tggagcgtgctgggaagcgccatggttttatggttggt 299 |||| |||||||||||| ||||| |||||||| ||||| Sbjct: 120102 tggaccgtgctgggaagtgccattgttttatgattggt 120139 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 ttgattaaccgatgccgccttgtatcacccgcc 487 |||||| || || |||||||||||||||||||| Sbjct: 120310 ttgattgacagaggccgccttgtatcacccgcc 120342
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1118_G04 Length = 134464 Score = 163 bits (82), Expect = 1e-36 Identities = 154/178 (86%) Strand = Plus / Plus Query: 2 ggcgtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcga 61 |||||||||||| || || ||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 9895 ggcgtggcaggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcga 9954 Query: 62 cgggcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaa 121 ||| |||| ||||| |||||||| || | ||| |||||| ||||| ||||||||||| Sbjct: 9955 cggtcaggcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaa 10014 Query: 122 cgccgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 ||||||||| || |||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 10015 cgccgtcccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 10072 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 262 tggagcgtgctgggaagcgccatggttttatggttggt 299 |||| |||||||||||| ||||| |||||||| ||||| Sbjct: 10127 tggaccgtgctgggaagtgccattgttttatgattggt 10164 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 ttgattaaccgatgccgccttgtatcacccgcc 487 |||||| || || |||||||||||||||||||| Sbjct: 10335 ttgattgacagaggccgccttgtatcacccgcc 10367
>dbj|AK107334.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-F08, full insert sequence Length = 1290 Score = 163 bits (82), Expect = 1e-36 Identities = 154/178 (86%) Strand = Plus / Plus Query: 2 ggcgtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcga 61 |||||||||||| || || ||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 773 ggcgtggcaggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcga 832 Query: 62 cgggcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaa 121 ||| |||| ||||| |||||||| || | ||| |||||| ||||| ||||||||||| Sbjct: 833 cggtcaggcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaa 892 Query: 122 cgccgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 ||||||||| || |||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 893 cgccgtcccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 950 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 ttgattaaccgatgccgccttgtatcacccgcc 487 |||||| || || |||||||||||||||||||| Sbjct: 1213 ttgattgacagaggccgccttgtatcacccgcc 1245
>dbj|AK073572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044E11, full insert sequence Length = 1416 Score = 163 bits (82), Expect = 1e-36 Identities = 154/178 (86%) Strand = Plus / Plus Query: 2 ggcgtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcga 61 |||||||||||| || || ||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 778 ggcgtggcaggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcga 837 Query: 62 cgggcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaa 121 ||| |||| ||||| |||||||| || | ||| |||||| ||||| ||||||||||| Sbjct: 838 cggtcaggcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaa 897 Query: 122 cgccgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 ||||||||| || |||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 898 cgccgtcccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 955 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 ttgattaaccgatgccgccttgtatcacccgcc 487 |||||| || || |||||||||||||||||||| Sbjct: 1218 ttgattgacagaggccgccttgtatcacccgcc 1250 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 268 gtgctgggaagcgccatggttttatggttggt 299 ||||||||||| ||||| |||||||| ||||| Sbjct: 1016 gtgctgggaagtgccattgttttatgattggt 1047
>gb|BT016845.1| Zea mays clone Contig678 mRNA sequence Length = 1066 Score = 149 bits (75), Expect = 1e-32 Identities = 150/175 (85%) Strand = Plus / Minus Query: 5 gtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcgacgg 64 ||||||||| || || ||||||||||| |||||||||||||||||| |||| || ||||| Sbjct: 641 gtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctggacgg 582 Query: 65 gcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaacgc 124 ||||| |||||| |||||||| || | || |||||| ||||||||||||| |||||| Sbjct: 581 gcaggccctctccttccgcgtcaccaccagcgacggccgctccgtggtctccagcaacgc 522 Query: 125 cgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 | ||||||||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 521 tgccccgcgcggctggggcttcggccagaccttcagcggggcccagttcaactga 467
>gb|AF332170.1| Zea mays alpha-expansin 2 (expA2) mRNA, complete cds Length = 1294 Score = 149 bits (75), Expect = 1e-32 Identities = 150/175 (85%) Strand = Plus / Plus Query: 5 gtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcgacgg 64 ||||||||| || || ||||||||||| |||||||||||||||||| |||| || ||||| Sbjct: 700 gtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctggacgg 759 Query: 65 gcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaacgc 124 ||||| ||| || |||||||| || | || |||||| |||||| ||||||||||||| Sbjct: 760 gcaggccctgtccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgc 819 Query: 125 cgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 || ||| ||||||||||| ||||||||||| |||||||| ||||||||| ||||| Sbjct: 820 cgccccccgcggctggtctttcggccagactttcagcggtgcccagttcaactga 874 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 cccgattggagcgtgctgggaagcgccatggttttatg 293 |||||||||||| ||| | || |||||||||||||||| Sbjct: 937 cccgattggagcctgccgagaggcgccatggttttatg 974
>gb|AY104768.1| Zea mays PCO099009 mRNA sequence Length = 796 Score = 149 bits (75), Expect = 1e-32 Identities = 150/175 (85%) Strand = Plus / Plus Query: 5 gtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcgacgg 64 ||||||||| || || ||||||||||| |||||||||||||||||| |||| || ||||| Sbjct: 167 gtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctggacgg 226 Query: 65 gcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaacgc 124 ||||| ||| || |||||||| || | || |||||| |||||| ||||||||||||| Sbjct: 227 gcaggccctgtccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgc 286 Query: 125 cgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 || ||| ||||||||||| ||||||||||| |||||||| ||||||||| ||||| Sbjct: 287 cgccccccgcggctggtctttcggccagactttcagcggtgcccagttcaactga 341 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 cccgattggagcgtgctgggaagcgccatggttttatg 293 |||||||||||| ||| | || |||||||||||||||| Sbjct: 404 cccgattggagcctgccgagaggcgccatggttttatg 441
>gb|BT018491.1| Zea mays clone EL01N0425C08.d mRNA sequence Length = 1392 Score = 125 bits (63), Expect = 2e-25 Identities = 147/175 (84%) Strand = Plus / Plus Query: 5 gtggcaggcgctctcacgcaactgggggcagaactggcagagcaacgcgctgctcgacgg 64 ||||||||| || || ||||||||||| |||||||||||||||||| |||| || ||||| Sbjct: 779 gtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctccttgacgg 838 Query: 65 gcagggcctctcgttccgcgtgacggcaggcaacggccagtccgtggtctccaacaacgc 124 ||| | ||| |||||||| || | || |||||| |||||| ||||||||||||| Sbjct: 839 gcaagccctggtcttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgc 898 Query: 125 cgtcccgcgcggctggtcattcggccagaccttcagcggcgcccagttccactga 179 || ||| ||||||||||| ||||||||||| |||||||| ||||||||| ||||| Sbjct: 899 cgccccccgcggctggtctttcggccagactttcagcggtgcccagttcaactga 953
>ref|NM_001062377.1| Oryza sativa (japonica cultivar-group) Os05g0477600 (Os05g0477600) mRNA, complete cds Length = 1309 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttcc 81 |||||||| ||||||||||||||||||||| | |||||||| ||| ||||||| |||| Sbjct: 651 aactggggccagaactggcagagcaacgcgttcctcgacggccagagcctctccttcc 708
>ref|NM_001056759.1| Oryza sativa (japonica cultivar-group) Os03g0377100 (Os03g0377100) mRNA, complete cds Length = 795 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagg 69 |||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 640 aactggggccagaactggcagagcggcgcgctgctcgacgggcagg 685
>ref|NM_001056576.1| Oryza sativa (japonica cultivar-group) Os03g0336400 (Os03g0336400) mRNA, complete cds Length = 1170 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 628 cgcaactgggggcagaactggcagagcaacgcgtacctcgacggcaaggcgctctccttc 687 Query: 81 cgcgtgacggcaggcaacggcc 102 ||||| || || ||| |||||| Sbjct: 688 cgcgtcaccgccggcgacggcc 709
>gb|AF247163.1| Oryza sativa alpha-expansin OsEXPA6 mRNA, complete cds Length = 1197 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 640 cgcaactgggggcagaactggcagagcaacgcgtacctcgacggcaaggcgctctccttc 699 Query: 81 cgcgtgacggcaggcaacggcc 102 ||||| || || ||| |||||| Sbjct: 700 cgcgtcaccgccggcgacggcc 721
>gb|AF394556.1| Oryza sativa alpha-expansin OsEXPA21 (EXPA21) gene, complete cds Length = 3929 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagg 69 |||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 3281 aactggggccagaactggcagagcggcgcgctgctcgacgggcagg 3326
>gb|AF394545.1| Oryza sativa alpha-expansin OsEXPA4 (EXPA4) gene, complete cds Length = 5851 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttcc 81 |||||||| ||||||||||||||||||||| | |||||||| ||| ||||||| |||| Sbjct: 5014 aactggggccagaactggcagagcaacgcgttcctcgacggccagagcctctccttcc 5071
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttcc 81 |||||||| ||||||||||||||||||||| | |||||||| ||| ||||||| |||| Sbjct: 38051 aactggggccagaactggcagagcaacgcgttcctcgacggccagagcctctccttcc 37994
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 101991 cgcaactgggggcagaactggcagagcaacgcgtacctcgacggcaaggcgctctccttc 101932 Query: 81 cgcgtgacggcaggcaacggcc 102 ||||| || || ||| |||||| Sbjct: 101931 cgcgtcaccgccggcgacggcc 101910
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagg 69 |||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 72986 aactggggccagaactggcagagcggcgcgctgctcgacgggcagg 73031
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttcc 81 |||||||| ||||||||||||||||||||| | |||||||| ||| ||||||| |||| Sbjct: 23352515 aactggggccagaactggcagagcaacgcgttcctcgacggccagagcctctccttcc 23352458 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 24 aactgggggcagaactggcagagcaacgc 52 |||||||| || ||||||||||||||||| Sbjct: 11318269 aactggggccaaaactggcagagcaacgc 11318241
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 12441072 cgcaactgggggcagaactggcagagcaacgcgtacctcgacggcaaggcgctctccttc 12441013 Query: 81 cgcgtgacggcaggcaacggcc 102 ||||| || || ||| |||||| Sbjct: 12441012 cgcgtcaccgccggcgacggcc 12440991 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagg 69 |||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 14728608 aactggggccagaactggcagagcggcgcgctgctcgacgggcagg 14728653
>gb|DQ061062.1| Oryza sativa (japonica cultivar-group) alpha-expansin 21 (EXPA21) mRNA, partial cds Length = 727 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagg 69 |||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 617 aactggggccagaactggcagagcggcgcgctgctcgacgggcagg 662
>dbj|AK107698.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-C08, full insert sequence Length = 1044 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 641 cgcaactgggggcagaactggcagagcaacgcgtacctcgacggcaaggcgctctccttc 700 Query: 81 cgcgtgacggcaggcaacggcc 102 ||||| || || ||| |||||| Sbjct: 701 cgcgtcaccgccggcgacggcc 722
>dbj|AK105988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G10, full insert sequence Length = 2440 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttcc 81 |||||||| ||||||||||||||||||||| | |||||||| ||| ||||||| |||| Sbjct: 651 aactggggccagaactggcagagcaacgcgttcctcgacggccagagcctctccttcc 708
>dbj|AK100179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029P10, full insert sequence Length = 1311 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttcc 81 |||||||| ||||||||||||||||||||| | |||||||| ||| ||||||| |||| Sbjct: 652 aactggggccagaactggcagagcaacgcgttcctcgacggccagagcctctccttcc 709
>gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA, complete cds Length = 1142 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||| ||| Sbjct: 651 cgcaactggggccagaactggcagagcaacgcggacctcgacggccagagcctctccttc 710 Query: 81 cg 82 || Sbjct: 711 cg 712 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 116 caacaacgccgtcccgcgcggctggtcattcggccagaccttc 158 ||||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 746 caacaacgccgcccccgccggctggtccttcggccagaccttc 788
>gb|U85246.1|OSU85246 Oryza sativa expansin (Os-EXP4) mRNA, complete cds Length = 1219 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttcc 81 |||||||| ||||||||||||||||||||| | |||||||| ||| ||||||| |||| Sbjct: 642 aactggggtcagaactggcagagcaacgcgttcctcgacggccagagcctctccttcc 699
>gb|AY543531.1| Triticum aestivum expansin EXPA5 mRNA, complete cds Length = 1004 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 36 aactggcagagcaacgcgctgctcgacgggcagggcctctcgttccgcgt 85 ||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 617 aactggcagagcaacgccaagctcgacgggcagagcctctcgttccgcgt 666
>gb|AF539640.1| Musa acuminata expansin1 (EXP1) gene, complete cds Length = 1834 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||| |||||||||||||||||| || || ||||||||| ||||||||||| Sbjct: 1663 cgcaactggggccagaactggcagagcaactcgtacctggacgggcagagcctctcgttc 1722 Query: 81 c 81 | Sbjct: 1723 c 1723
>gb|AF332169.1| Zea mays alpha-expansin (expA1) mRNA, complete cds Length = 1090 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcct 73 ||||||||||| |||||||||||||||||| |||| |||||||| ||| |||| Sbjct: 668 cgcaactggggccagaactggcagagcaactcgctcctcgacggccagagcct 720
>gb|AY083168.1| Musa acuminata expansin 1 (EXP1) mRNA, complete cds Length = 1098 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||| |||||||||||||||||| || || ||||||||| ||||||||||| Sbjct: 672 cgcaactggggccagaactggcagagcaactcgtacctggacgggcagagcctctcgttc 731 Query: 81 c 81 | Sbjct: 732 c 732
>gb|AY104146.1| Zea mays PCO064861 mRNA sequence Length = 1106 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcct 73 ||||||||||| |||||||||||||||||| |||| |||||||| ||| |||| Sbjct: 685 cgcaactggggccagaactggcagagcaactcgctcctcgacggccagagcct 737
>emb|AJ276007.1|FPR276007 Festuca pratensis partial mRNA for expansin (exp2 gene) Length = 1248 Score = 63.9 bits (32), Expect = 7e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctc 76 ||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||| Sbjct: 668 cgcaactggggccagaactggcagagcaacgcggacctcgacggccagagcctctc 723
>emb|CT833212.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102G08, full insert sequence Length = 1038 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||| |||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 671 cgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttc 730 Query: 81 cg 82 || Sbjct: 731 cg 732
>ref|NM_001049122.1| Oryza sativa (japonica cultivar-group) Os01g0248900 (Os01g0248900) mRNA, complete cds Length = 893 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||| |||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 604 cgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttc 663 Query: 81 cg 82 || Sbjct: 664 cg 665
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||| |||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 159493 cgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttc 159434 Query: 81 cg 82 || Sbjct: 159433 cg 159432 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 24 aactgggggcagaactggcagagcaacgcg 53 ||||||||| |||||||||||||||||||| Sbjct: 165204 aactggggggagaactggcagagcaacgcg 165175
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||| |||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 8195372 cgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttc 8195313 Query: 81 cg 82 || Sbjct: 8195312 cg 8195311 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 24 aactgggggcagaactggcagagcaacgcg 53 ||||||||| |||||||||||||||||||| Sbjct: 8201083 aactggggggagaactggcagagcaacgcg 8201054 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaac 50 ||||||||||| |||||||||||||||||| Sbjct: 35139939 cgcaactggggccagaactggcagagcaac 35139968 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cggctggtcattcggccagaccttcagcggcgcccagttc 173 ||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 9525858 cggctggtccttcggccagaccttctccggcggccagttc 9525897
>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C11 Length = 139399 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||| |||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 113090 cgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttc 113031 Query: 81 cg 82 || Sbjct: 113030 cg 113029 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 24 aactgggggcagaactggcagagcaacgcg 53 ||||||||| |||||||||||||||||||| Sbjct: 118801 aactggggggagaactggcagagcaacgcg 118772
>dbj|AK111100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-G12, full insert sequence Length = 893 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||| |||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 604 cgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttc 663 Query: 81 cg 82 || Sbjct: 664 cg 665
>gb|AY500147.1| Craterostigma plantagineum expansin A1 (EXPA1) mRNA, partial cds Length = 783 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcg 53 ||||||||||| ||||||||||||||||||||| Sbjct: 628 cgcaactggggccagaactggcagagcaacgcg 660
>gb|AY500146.1| Craterostigma plantagineum expansin A3 (EXPA3) mRNA, partial cds Length = 672 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 4 cgtggcaggcgctctcacgcaactgggggcagaactggcagagcaac 50 ||||||||||| | | ||||||||||| |||||||||||||||||| Sbjct: 503 cgtggcaggcgatgacccgcaactggggccagaactggcagagcaac 549
>emb|CT832496.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA040O16, full insert sequence Length = 1324 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaac 50 ||||||||||| |||||||||||||||||| Sbjct: 704 cgcaactggggccagaactggcagagcaac 733
>ref|NM_001065134.1| Oryza sativa (japonica cultivar-group) Os06g0718100 (Os06g0718100) mRNA, complete cds Length = 1066 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 57 ctcgacgggcagggcctctcgttccg 82 |||||||||||||||||||||||||| Sbjct: 737 ctcgacgggcagggcctctcgttccg 762
>ref|NM_001051191.1| Oryza sativa (japonica cultivar-group) Os01g0823100 (Os01g0823100) mRNA, complete cds Length = 1339 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaac 50 ||||||||||| |||||||||||||||||| Sbjct: 696 cgcaactggggccagaactggcagagcaac 725
>ref|NM_001049123.1| Oryza sativa (japonica cultivar-group) Os01g0249100 (Os01g0249100) mRNA, complete cds Length = 765 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcg 53 ||||||||| |||||||||||||||||||| Sbjct: 604 aactggggggagaactggcagagcaacgcg 633
>gb|AF394544.1| Oryza sativa alpha-expansin OsEXPA2 (EXPA2) gene, complete cds Length = 5000 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaac 50 ||||||||||| |||||||||||||||||| Sbjct: 2648 cgcaactggggccagaactggcagagcaac 2677
>gb|AY500145.1| Craterostigma plantagineum expansin A2 (EXPA2) mRNA, partial cds Length = 657 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaac 50 ||||||||||| |||||||||||||||||| Sbjct: 505 cgcaactggggccagaactggcagagcaac 534
>gb|U30477.1|OSU30477 Oryza sativa (japonica cultivar-group) expansin Os-EXPA2 (Os-EXPA2) mRNA, complete cds Length = 1323 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaac 50 ||||||||||| |||||||||||||||||| Sbjct: 683 cgcaactggggccagaactggcagagcaac 712
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 57 ctcgacgggcagggcctctcgttccg 82 |||||||||||||||||||||||||| Sbjct: 30005115 ctcgacgggcagggcctctcgttccg 30005140 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gtcgtcgtcaacctcccgat 261 |||||||||||||||||||| Sbjct: 29553816 gtcgtcgtcaacctcccgat 29553835
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 57 ctcgacgggcagggcctctcgttccg 82 |||||||||||||||||||||||||| Sbjct: 85812 ctcgacgggcagggcctctcgttccg 85837
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaac 50 ||||||||||| |||||||||||||||||| Sbjct: 19023 cgcaactggggccagaactggcagagcaac 19052
>gb|DQ061068.1| Oryza sativa (japonica cultivar-group) alpha-expansin 29 (EXPA29) mRNA, partial cds Length = 708 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 57 ctcgacgggcagggcctctcgttccg 82 |||||||||||||||||||||||||| Sbjct: 596 ctcgacgggcagggcctctcgttccg 621
>gb|DQ061054.1| Oryza sativa (japonica cultivar-group) alpha-expansin 9 (EXPA9) mRNA, partial cds Length = 655 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcg 53 ||||||||| |||||||||||||||||||| Sbjct: 592 aactggggggagaactggcagagcaacgcg 621
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaac 50 ||||||||||| |||||||||||||||||| Sbjct: 147089 cgcaactggggccagaactggcagagcaac 147118
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 57 ctcgacgggcagggcctctcgttccg 82 |||||||||||||||||||||||||| Sbjct: 81263 ctcgacgggcagggcctctcgttccg 81288
>dbj|AK070463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M24, full insert sequence Length = 1341 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaac 50 ||||||||||| |||||||||||||||||| Sbjct: 698 cgcaactggggccagaactggcagagcaac 727
>dbj|AK070133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046O16, full insert sequence Length = 1071 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 57 ctcgacgggcagggcctctcgttccg 82 |||||||||||||||||||||||||| Sbjct: 742 ctcgacgggcagggcctctcgttccg 767
>gb|AF428175.1| Rumex palustris expansin 8 precursor (EXP8) mRNA, complete cds Length = 1117 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 18 tcacgcaactgggggcagaactggcagagcaac 50 ||||| ||||||||||| ||||||||||||||| Sbjct: 678 tcacggaactgggggcaaaactggcagagcaac 710
>gb|DQ100332.1| Eucalyptus globulus putative alpha-expansin (EXPA5) mRNA, partial cds Length = 714 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgc 52 |||||||| |||||||||||||||||||| Sbjct: 241 aactggggacagaactggcagagcaacgc 269
>gb|DQ100330.1| Eucalyptus globulus putative alpha-expansin (EXPA3) mRNA, partial cds Length = 887 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgc 52 |||||||| |||||||||||||||||||| Sbjct: 245 aactggggccagaactggcagagcaacgc 273 Score = 46.1 bits (23), Expect = 0.15 Identities = 62/75 (82%) Strand = Plus / Plus Query: 106 ccgtggtctccaacaacgccgtcccgcgcggctggtcattcggccagaccttcagcggcg 165 |||||||||||||||||| || ||| ||| ||||| ||||| ||||||||| ||| | Sbjct: 327 ccgtggtctccaacaacgtcgcccccgccgggtggtccttcgggcagaccttcgccggag 386 Query: 166 cccagttccactgag 180 | ||||||| ||||| Sbjct: 387 cgcagttccgctgag 401
>gb|AY692477.1| Triticum aestivum alpha-expansin EXPA3 mRNA, partial cds Length = 932 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||| |||||||||||| |||||| | |||| ||| |||| |||||| ||| Sbjct: 294 cgcaactggggccagaactggcagtccaacgccatcctcgtcggccaggccctctccttc 353 Query: 81 cgcgt 85 ||||| Sbjct: 354 cgcgt 358
>gb|AY543535.1| Triticum aestivum expansin EXPA9 mRNA, complete cds Length = 1013 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||| |||||||||||| |||||| | |||| ||| |||| |||||| ||| Sbjct: 701 cgcaactggggccagaactggcagtccaacgccatcctcgtcggccaggccctctccttc 760 Query: 81 cgcgt 85 ||||| Sbjct: 761 cgcgt 765
>gb|AY543529.1| Triticum aestivum expansin EXPA3 mRNA, complete cds Length = 1106 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcg 53 |||| |||||| ||||||||||||||||||||| Sbjct: 654 cgcatctggggccagaactggcagagcaacgcg 686 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 116 caacaacgccgtcccgcgcggctggtcattcggccagaccttc 158 ||||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 749 caacaacgccgcccccgccggctggtccttcggccagaccttc 791
>gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds Length = 891 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 18 tcacgcaactgggggcagaactggcagagcaac 50 |||||||||||||| ||||||||||| |||||| Sbjct: 542 tcacgcaactggggacagaactggcaaagcaac 574
>ref|NM_001049254.1| Oryza sativa (japonica cultivar-group) Os01g0274500 (Os01g0274500) mRNA, complete cds Length = 759 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cggctggtcattcggccagaccttcagcggcgcccagttc 173 ||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 717 cggctggtccttcggccagaccttctccggcggccagttc 756
>gb|AC189353.1| Brassica rapa subsp. pekinensis clone KBrB043L15, complete sequence Length = 124870 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 135 ggctggtcattcggccagaccttcagcggcgc 166 |||||||| |||||||||||||||| |||||| Sbjct: 39386 ggctggtccttcggccagaccttcaccggcgc 39417
>gb|DQ062981.1| Oryza sativa (japonica cultivar-group) alpha-expansin 11 (EXPA11) mRNA, partial cds Length = 798 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cggctggtcattcggccagaccttcagcggcgcccagttc 173 ||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 696 cggctggtccttcggccagaccttctccggcggccagttc 735
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cggctggtcattcggccagaccttcagcggcgcccagttc 173 ||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 59287 cggctggtccttcggccagaccttctccggcggccagttc 59326
>gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds Length = 923 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 18 tcacgcaactgggggcagaactggcagagcaa 49 |||||||||||||| ||||||||||| ||||| Sbjct: 542 tcacgcaactggggacagaactggcaaagcaa 573
>gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds Length = 998 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 18 tcacgcaactgggggcagaactggcagagcaa 49 |||||||||||||| ||||||||||| ||||| Sbjct: 693 tcacgcaactggggacagaactggcaaagcaa 724
>gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds Length = 919 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 18 tcacgcaactgggggcagaactggcagagcaa 49 |||||||||||||| ||||||||||| ||||| Sbjct: 542 tcacgcaactggggacagaactggcaaagcaa 573
>gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds Length = 923 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 18 tcacgcaactgggggcagaactggcagagcaa 49 |||||||||||||| ||||||||||| ||||| Sbjct: 542 tcacgcaactggggacagaactggcaaagcaa 573
>gb|DQ183068.1| Fragaria x ananassa cultivar Chandler expansin (EXP4) mRNA, complete cds Length = 1365 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 ||||||||||| ||||||||||||||| Sbjct: 614 aactgggggcaaaactggcagagcaac 640
>gb|AF428179.1| Rumex palustris expansin 12 precursor (EXP12) mRNA, complete cds Length = 1197 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggca 43 ||||||||||||||||||||||| Sbjct: 664 cgcaactgggggcagaactggca 686
>gb|AF428178.1| Rumex palustris expansin 11 precursor (EXP11) mRNA, complete cds Length = 1087 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggca 43 ||||||||||||||||||||||| Sbjct: 664 cgcaactgggggcagaactggca 686
>gb|AF428177.1| Rumex palustris expansin 10 precursor (EXP10) mRNA, complete cds Length = 1132 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggca 43 ||||||||||||||||||||||| Sbjct: 616 cgcaactgggggcagaactggca 638
>gb|AF332173.1| Zea mays alpha-expansin 5 mRNA, complete cds Length = 1029 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 537 aactggggccagaactggcagagcaac 563
>gb|AF512544.1| Gossypium hirsutum alpha-expansin precursor (Exp6) gene, complete cds Length = 1719 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 1269 aactggggccagaactggcagagcaac 1295
>dbj|AB029083.1| Prunus persica PpExp1 mRNA for expansin, complete cds Length = 1220 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 661 aactggggccagaactggcagagcaac 687
>dbj|AB218787.1| Prunus mume Pm68 mRNA for Expansin, complete cds Length = 1258 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 689 aactggggccagaactggcagagcaac 715
>gb|DQ100329.1| Eucalyptus globulus putative alpha-expansin (EXPA2) mRNA, partial cds Length = 1168 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 469 aactggggccagaactggcagagcaac 495
>gb|DQ100328.1| Eucalyptus globulus putative alpha-expansin (EXPA1) mRNA, partial cds Length = 788 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 445 aactggggacagaactggcagagcaac 471
>gb|AY083167.1| Malus x domestica expansin 2 (EXP2) mRNA, partial cds Length = 815 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 435 aactggggccagaactggcagagcaac 461
>dbj|AB093028.1| Pyrus communis PcExp1 mRNA for expansin, complete cds Length = 1243 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 652 aactggggccagaactggcagagcaac 678
>emb|AJ489609.1|CAR489609 Cicer arietinum mRNA for alpha-expansin 4 (expa4 gene) Length = 1270 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 640 aactggggtcagaactggcagagcaac 666
>gb|AF350938.1|AF350938 Prunus cerasus expansin (EXP3) mRNA, complete cds Length = 1172 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||||||||| |||||||||||| Sbjct: 660 aactgggggcagaattggcagagcaac 686
>gb|AF350937.1|AF350937 Prunus cerasus expansin (EXP2) mRNA, complete cds Length = 1109 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 ||||||||||| ||||||||||||||| Sbjct: 687 aactgggggcaaaactggcagagcaac 713
>gb|AF350936.1|AF350936 Prunus cerasus expansin (EXP1) mRNA, complete cds Length = 1233 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 666 aactggggccagaactggcagagcaac 692
>gb|AF297521.1|AF297521 Prunus avium expansin 1 (Exp1) mRNA, complete cds Length = 1048 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 ||||||||||| ||||||||||||||| Sbjct: 693 aactgggggcaaaactggcagagcaac 719
>dbj|AB099927.1| Malus x domestica MdEXPA2 mRNA for expansin, partial cds Length = 870 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 511 aactggggccagaactggcagagcaac 537
>dbj|AP004962.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT28H14, TM0141, complete sequence Length = 100810 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 24 aactgggggcagaactggcagagcaac 50 ||||||||||| ||||||||||||||| Sbjct: 17750 aactgggggcaaaactggcagagcaac 17724
>gb|AF159563.1|AF159563 Fragaria x ananassa expansin (Exp2) mRNA, complete cds Length = 1180 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 654 aactggggacagaactggcagagcaac 680
>dbj|AB104445.1| Vitis labrusca x Vitis vinifera Vexp-4 mRNA for expansin, complete cds Length = 1175 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 651 aactggggccagaactggcagagcaac 677
>dbj|AB104444.1| Vitis labrusca x Vitis vinifera Vexp-3 mRNA for expansin, complete cds Length = 1195 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 661 aactggggccagaactggcagagcaac 687
>dbj|AB104443.1| Vitis labrusca x Vitis vinifera Vexp-2 mRNA for expansin, complete cds Length = 1180 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 648 aactggggccagaactggcagagcaac 674
>gb|AY109967.1| Zea mays CL5898_1 mRNA sequence Length = 570 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 |||||||| |||||||||||||||||| Sbjct: 53 aactggggccagaactggcagagcaac 79
>gb|U93167.1|PAU93167 Prunus armeniaca expansin (PA-Exp1) mRNA, complete cds Length = 1109 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaac 50 ||||||||||| ||||||||||||||| Sbjct: 686 aactgggggcaaaactggcagagcaac 712
>dbj|AB196981.1| Sagittaria pygmaea SpEXP3 mRNA for expansin, complete cds Length = 1781 Score = 44.1 bits (22), Expect = 0.61 Identities = 52/62 (83%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttccgc 83 ||||||||||||||||||||| |||||| |||| | || |||| |||||||||||| Sbjct: 962 aactgggggcagaactggcagtccaacgccgtgcttgtaggccaggcactctcgttccgc 1021 Query: 84 gt 85 || Sbjct: 1022 gt 1023
>gb|AY589583.1| Triticum aestivum alpha-expansin EXPA1 mRNA, complete cds Length = 965 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Plus Query: 36 aactggcagagcaacgcgctgctcgacgggcagggcctctcgttcc 81 ||||||||| ||||||||||||| ||| ||| |||||||||||| Sbjct: 659 aactggcagtccaacgcgctgctcaccggccagagcctctcgttcc 704
>ref|NM_001061613.1| Oryza sativa (japonica cultivar-group) Os05g0277000 (Os05g0277000) mRNA, complete cds Length = 747 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 24 aactgggggcagaactggcagagcaacgc 52 |||||||| || ||||||||||||||||| Sbjct: 592 aactggggccaaaactggcagagcaacgc 620
>ref|NM_179537.1| Arabidopsis thaliana ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) (ATEXPA1) mRNA, complete cds Length = 1309 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 ggctggtcattcggccagaccttca 159 |||||||| |||||||||||||||| Sbjct: 816 ggctggtctttcggccagaccttca 840
>ref|NM_179538.1| Arabidopsis thaliana ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) (ATEXPA1) mRNA, complete cds Length = 1322 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 ggctggtcattcggccagaccttca 159 |||||||| |||||||||||||||| Sbjct: 907 ggctggtctttcggccagaccttca 931
>ref|NM_105622.2| Arabidopsis thaliana ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) (ATEXPA1) mRNA, complete cds Length = 1396 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 ggctggtcattcggccagaccttca 159 |||||||| |||||||||||||||| Sbjct: 907 ggctggtctttcggccagaccttca 931
>gb|AF428176.1| Rumex palustris expansin 9 precursor (EXP9) mRNA, partial cds Length = 981 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 6 tggcaggcgctctcacgcaactgggggcagaactggcagagcaac 50 ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 432 tggcaggcgatgtcccggaattggggccagaactggcagagcaac 476
>gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0055E23, complete sequence Length = 156572 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 24 aactgggggcagaactggcagagcaacgc 52 |||||||| || ||||||||||||||||| Sbjct: 43546 aactggggccaaaactggcagagcaacgc 43518
>gb|U30476.1|ATU30476 Arabidopsis thaliana expansin At-EXPA1 (At-EXPA1) mRNA, partial cds Length = 749 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 ggctggtcattcggccagaccttca 159 |||||||| |||||||||||||||| Sbjct: 670 ggctggtctttcggccagaccttca 694
>dbj|AK125241.1| Homo sapiens cDNA FLJ43251 fis, clone HEART2006131, weakly similar to Mus musculus 2-hydroxyphytanoyl-CoA lyase (Hpcl-pending) Length = 1776 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 gcggtggtaaaggctggtttg 457 ||||||||||||||||||||| Sbjct: 1548 gcggtggtaaaggctggtttg 1568
>gb|AC098563.6| Rattus norvegicus 1 BAC CH230-123A15 (Children's Hospital Oakland Research Institute) complete sequence Length = 250414 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 gcagacgcagtactatctggt 215 ||||||||||||||||||||| Sbjct: 146105 gcagacgcagtactatctggt 146085
>gb|DQ100331.1| Eucalyptus globulus subsp. globulus alpha-expansin 4 (EXPA4) mRNA, partial cds Length = 907 Score = 42.1 bits (21), Expect = 2.4 Identities = 54/65 (83%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcagagcaacgcgctgctcgacgggcagggcctctcgttc 80 ||||||||||| |||||||||||| |||||| |||| | ||| |||| ||||| ||| Sbjct: 277 cgcaactggggccagaactggcagtccaacgccgtgctggccggccaggcgctctccttc 336 Query: 81 cgcgt 85 ||||| Sbjct: 337 cgcgt 341
>gb|AY051047.1| Arabidopsis thaliana putative expansin protein EXP1 (At1g69530) mRNA, complete cds Length = 784 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 ggctggtcattcggccagaccttca 159 |||||||| |||||||||||||||| Sbjct: 709 ggctggtctttcggccagaccttca 733
>gb|AF360291.1| Arabidopsis thaliana putative expansin protein At-EXP1 (At1g69530) mRNA, complete cds Length = 1339 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 ggctggtcattcggccagaccttca 159 |||||||| |||||||||||||||| Sbjct: 816 ggctggtctttcggccagaccttca 840
>emb|CR392032.9| Zebrafish DNA sequence from clone DKEYP-64A3 in linkage group 2, complete sequence Length = 191649 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tggttgtagtagttgttttag 232 ||||||||||||||||||||| Sbjct: 5478 tggttgtagtagttgttttag 5458
>gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10D13 genomic sequence, complete sequence Length = 107214 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 ggctggtcattcggccagaccttca 159 |||||||| |||||||||||||||| Sbjct: 86328 ggctggtctttcggccagaccttca 86352
>gb|AF043428.1| Rattus norvegicus H19 gene, 5' flanking region Length = 6045 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 gcagacgcagtactatctggt 215 ||||||||||||||||||||| Sbjct: 2789 gcagacgcagtactatctggt 2769
>gb|AF167360.1|AF167360 Rumex palustris expansin (EXP1) mRNA, complete cds Length = 1173 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 6 tggcaggcgctctcacgcaactgggggcagaactggcagagcaac 50 ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 665 tggcaggcgatgtcccggaattggggccagaactggcagagcaac 709
>emb|BX815362.1|CNS0ABIP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZG10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1153 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 ggctggtcattcggccagaccttca 159 |||||||| |||||||||||||||| Sbjct: 777 ggctggtctttcggccagaccttca 801
>emb|BX815073.1|CNS0ABGA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS30ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1287 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 ggctggtcattcggccagaccttca 159 |||||||| |||||||||||||||| Sbjct: 800 ggctggtctttcggccagaccttca 824
>gb|AF129818.1|AF129818 Rattus norvegicus H19 gene, promoter sequence Length = 4349 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 gcagacgcagtactatctggt 215 ||||||||||||||||||||| Sbjct: 505 gcagacgcagtactatctggt 485
>emb|CT832610.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122O08, full insert sequence Length = 1545 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gtcgtcgtcaacctcccgat 261 |||||||||||||||||||| Sbjct: 42 gtcgtcgtcaacctcccgat 61
>ref|NM_001077323.1| Danio rerio zgc:154001 (zgc:154001), mRNA gb|BC124790.1| Danio rerio zgc:154001, mRNA (cDNA clone MGC:154001 IMAGE:8000269), complete cds Length = 2589 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 tggtctccaacaacgccgtcccgc 132 |||||||||||||| ||||||||| Sbjct: 1694 tggtctccaacaacaccgtcccgc 1717
>gb|AF384675.1| Mus musculus FGF15 (Fgf15) gene, complete cds; BC1 scRNA gene, complete sequence; hypothetical protein and cyclin D1 (Ccnd1) genes, complete cds Length = 154480 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gtgctgggaagcgccatggt 287 |||||||||||||||||||| Sbjct: 46769 gtgctgggaagcgccatggt 46788
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 gcaacgcgctgctcgacgggcagg 69 |||||||||||||| ||||||||| Sbjct: 2681368 gcaacgcgctgctctacgggcagg 2681345
>gb|BC069973.1| Mus musculus cDNA clone IMAGE:5369788, partial cds Length = 790 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gtgctgggaagcgccatggt 287 |||||||||||||||||||| Sbjct: 87 gtgctgggaagcgccatggt 106
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 aggcctggtattatcatggg 368 |||||||||||||||||||| Sbjct: 1670892 aggcctggtattatcatggg 1670873
>gb|DQ100333.1| Eucalyptus globulus putative alpha-expansin (EXPA6) mRNA, partial cds Length = 1075 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcag 44 ||||||||||| |||||||||||| Sbjct: 460 cgcaactggggccagaactggcag 483
>gb|AC161763.3| Mus musculus BAC clone RP23-294B14 from chromosome 7, complete sequence Length = 221679 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gtgctgggaagcgccatggt 287 |||||||||||||||||||| Sbjct: 84106 gtgctgggaagcgccatggt 84087
>dbj|AK046447.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230385N19 product:hypothetical protein, full insert sequence Length = 2236 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gtgctgggaagcgccatggt 287 |||||||||||||||||||| Sbjct: 1492 gtgctgggaagcgccatggt 1511
>ref|XM_680021.1| PREDICTED: Danio rerio similar to Vitamin K-dependent protein S precursor (LOC557045), mRNA Length = 636 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 tggtctccaacaacgccgtcccgc 132 |||||||||||||| ||||||||| Sbjct: 356 tggtctccaacaacaccgtcccgc 379
>emb|AL391065.6| Human DNA sequence from clone RP11-108M21 on chromosome 1 Contains part of a novel gene, complete sequence Length = 170639 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 604 tgagcctctggcttttggat 623 |||||||||||||||||||| Sbjct: 56874 tgagcctctggcttttggat 56893
>dbj|AB093034.1| Pyrus communis PcExp7 mRNA for expansin, complete cds Length = 1076 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcag 44 ||||||||||| |||||||||||| Sbjct: 662 cgcaactggggtcagaactggcag 685
>dbj|AB093029.1| Pyrus communis PcExp2 mRNA for expansin, complete cds Length = 1153 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tgggggcagaactggcagagcaac 50 ||||| |||||||||||||||||| Sbjct: 671 tggggccagaactggcagagcaac 694
>ref|NM_007631.1| Mus musculus cyclin D1 (Ccnd1), mRNA gb|S78355.1| Cyl-1=cyclin D1 [mice, BALB/c, brain, mRNA, 3737 nt] Length = 3737 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gtgctgggaagcgccatggt 287 |||||||||||||||||||| Sbjct: 3646 gtgctgggaagcgccatggt 3627
>dbj|AK213587.1| Mus musculus cDNA, clone:Y2G0128M15, strand:unspecified Length = 372 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gtgctgggaagcgccatggt 287 |||||||||||||||||||| Sbjct: 259 gtgctgggaagcgccatggt 278
>gb|AY299690.1| Sambucus nigra clone SniExp2 expansin mRNA, complete cds Length = 1190 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcag 44 ||||||||||| |||||||||||| Sbjct: 619 cgcaactggggtcagaactggcag 642
>dbj|AK190498.1| Mus musculus cDNA, clone:Y1G0102O21, strand:unspecified Length = 384 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gtgctgggaagcgccatggt 287 |||||||||||||||||||| Sbjct: 83 gtgctgggaagcgccatggt 102
>gb|AC006375.4| Homo sapiens BAC clone RP11-362A15 from 2, complete sequence Length = 111073 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tagttgttttagcgagtggtggtc 244 |||||||||||| ||||||||||| Sbjct: 48117 tagttgttttagggagtggtggtc 48094
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gtcgtcgtcaacctcccgat 261 |||||||||||||||||||| Sbjct: 118322 gtcgtcgtcaacctcccgat 118341
>dbj|AB099930.1| Malus x domestica MdEXPA6 mRNA for expansin, partial cds Length = 940 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 cgcaactgggggcagaactggcag 44 ||||||||||| |||||||||||| Sbjct: 514 cgcaactggggtcagaactggcag 537
>dbj|AK069893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039F13, full insert sequence Length = 1528 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gtcgtcgtcaacctcccgat 261 |||||||||||||||||||| Sbjct: 32 gtcgtcgtcaacctcccgat 51
>emb|X85187.1|PSPALPR P.sativum mRNA for pollen allergen-like protein Length = 822 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aactgggggcagaactggca 43 |||||||||||||||||||| Sbjct: 637 aactgggggcagaactggca 656
>ref|NM_171992.2| Rattus norvegicus cyclin D1 (Ccnd1), mRNA dbj|D14014.1|RATCYCLD1 Rattus rattus mRNA for cyclin D1, complete cds Length = 3751 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gtgctgggaagcgccatggt 287 |||||||||||||||||||| Sbjct: 3726 gtgctgggaagcgccatggt 3707
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 agggcctctcgttccgcgtg 86 |||||||||||||||||||| Sbjct: 2558503 agggcctctcgttccgcgtg 2558484 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 89,368,425 Number of extensions: 4037608 Number of successful extensions: 95488 Number of sequences better than 10.0: 145 Number of HSP's gapped: 95484 Number of HSP's successfully gapped: 176 Length of query: 647 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 625 Effective length of database: 18,508,616,841 Effective search space: 11567885525625 Effective search space used: 11567885525625 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
