ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf38a17 |
|---|---|
| Clone Library Name | barley_pub |
>P70318:TIAR_MOUSE Nucleolysin TIAR - Mus musculus (Mouse)| Length = 392 Score = 90.1 bits (222), Expect = 9e-18 Identities = 52/142 (36%), Positives = 77/142 (54%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A+ AI + G+WLG RQIR NWAT+ A + Q T++K + ++ N+ Sbjct: 168 AENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQL---------RFEDVVNQSS 218 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQ 360 P++ TVY G ++ + + + F G I E+RV +KG+ FVR+STHE AA Sbjct: 219 PKN----CTVYCGGIASGLTDQLMRQTFSPFG--QIMEIRVFPEKGYSFVRFSTHESAAH 272 Query: 361 AIQTGNGQLIGGRQIKCSWGSK 426 AI + NG I G +KC WG + Sbjct: 273 AIVSVNGTTIEGHVVKCYWGKE 294 Score = 54.7 bits (130), Expect = 4e-07 Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 6/148 (4%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A A+ +NG+ + ++++ NWAT ++ Sbjct: 78 AAAALAAMNGRKILGKEVKVNWATTPSSQ------------------------------- 106 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYST 342 +D + V+VG+LS +I + D+ F G I + RV +D KG+GFV + Sbjct: 107 KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFG--KISDARVVKDMATGKSKGYGFVSFYN 164 Query: 343 HEEAAQAIQTGNGQLIGGRQIKCSWGSK 426 +A AI GQ +GGRQI+ +W ++ Sbjct: 165 KLDAENAIVHMGGQWLGGRQIRTNWATR 192 Score = 43.9 bits (102), Expect = 8e-04 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 19/99 (19%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLG--------AGSIEEVRVTRDKGFG----- 324 ED+ Q T+YVGNLS D+ + + F +G + RV GF Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62 Query: 325 ------FVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGS 423 FV + H +AA A+ NG+ I G+++K +W + Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT 101
>P52912:TIA1_MOUSE Nucleolysin TIA-1 - Mus musculus (Mouse)| Length = 386 Score = 89.7 bits (221), Expect = 1e-17 Identities = 53/144 (36%), Positives = 77/144 (53%), Gaps = 2/144 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMV--ELISGSSEAGKENANE 174 A+ AI ++ G+WLG RQIR NWAT+ A + +++K + E++S SS Sbjct: 160 AENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS--------- 210 Query: 175 DGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEA 354 P TVY G ++ + + + F G I E+RV DKG+ FVR+S+HE A Sbjct: 211 ------PNNCTVYCGGVTSGLTEQLMRQTFSPFG--QIMEIRVFPDKGYSFVRFSSHESA 262 Query: 355 AQAIQTGNGQLIGGRQIKCSWGSK 426 A AI + NG I G +KC WG + Sbjct: 263 AHAIVSVNGTTIEGHVVKCYWGKE 286 Score = 62.8 bits (151), Expect = 2e-09 Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 6/148 (4%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A A+ +NG+ + ++++ NWAT ++ K+ T S +V S++ +++ + Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWATTPSSQ---KKDTSSSTVV-----STQRSQDHFH--- 107 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYST 342 V+VG+LS +I + D+ F G I + RV +D KG+GFV + Sbjct: 108 ---------VFVGDLSPEITTEDIKAAFAPFGR--ISDARVVKDMATGKSKGYGFVSFFN 156 Query: 343 HEEAAQAIQTGNGQLIGGRQIKCSWGSK 426 +A AIQ GQ +GGRQI+ +W ++ Sbjct: 157 KWDAENAIQQMGGQWLGGRQIRTNWATR 184 Score = 42.0 bits (97), Expect = 0.003 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG----FGFVRYSTHEEAAQAIQT 372 T+YVGNLS D+ + + F +G + ++ D + FV + H AA A+ Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGP--CKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAA 65 Query: 373 GNGQLIGGRQIKCSWGS 423 NG+ I G+++K +W + Sbjct: 66 MNGRKIMGKEVKVNWAT 82
>Q01085:TIAR_HUMAN Nucleolysin TIAR - Homo sapiens (Human)| Length = 375 Score = 88.2 bits (217), Expect = 4e-17 Identities = 51/142 (35%), Positives = 76/142 (53%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A+ AI + G+WLG RQIR NWAT+ A + Q ++K + ++ N+ Sbjct: 151 AENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL---------RFEDVVNQSS 201 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQ 360 P++ TVY G ++ + + + F G I E+RV +KG+ FVR+STHE AA Sbjct: 202 PKN----CTVYCGGIASGLTDQLMRQTFSPFG--QIMEIRVFPEKGYSFVRFSTHESAAH 255 Query: 361 AIQTGNGQLIGGRQIKCSWGSK 426 AI + NG I G +KC WG + Sbjct: 256 AIVSVNGTTIEGHVVKCYWGKE 277 Score = 54.7 bits (130), Expect = 4e-07 Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 6/148 (4%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A A+ +NG+ + ++++ NWAT ++ Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATTPSSQ------------------------------- 89 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYST 342 +D + V+VG+LS +I + D+ F G I + RV +D KG+GFV + Sbjct: 90 KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFG--KISDARVVKDMATGKSKGYGFVSFYN 147 Query: 343 HEEAAQAIQTGNGQLIGGRQIKCSWGSK 426 +A AI GQ +GGRQI+ +W ++ Sbjct: 148 KLDAENAIVHMGGQWLGGRQIRTNWATR 175 Score = 46.6 bits (109), Expect = 1e-04 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRV--TRDKGFGFVRYSTHEEAA 357 ED+ Q T+YVGNLS D+ + + F +G ++ T + + FV + H +AA Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62 Query: 358 QAIQTGNGQLIGGRQIKCSWGS 423 A+ NG+ I G+++K +W + Sbjct: 63 AALAAMNGRKILGKEVKVNWAT 84
>P31483:TIA1_HUMAN Nucleolysin TIA-1 isoform p40 - Homo sapiens (Human)| Length = 386 Score = 87.8 bits (216), Expect = 5e-17 Identities = 49/142 (34%), Positives = 76/142 (53%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A+ AI ++ G+WLG RQIR NWAT+ A + +++K + + +E Sbjct: 160 AENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL-------------SYDEVV 206 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQ 360 + +P TVY G ++ + + + F G I E+RV DKG+ FVR+++HE AA Sbjct: 207 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG--QIMEIRVFPDKGYSFVRFNSHESAAH 264 Query: 361 AIQTGNGQLIGGRQIKCSWGSK 426 AI + NG I G +KC WG + Sbjct: 265 AIVSVNGTTIEGHVVKCYWGKE 286 Score = 61.6 bits (148), Expect = 4e-09 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 6/148 (4%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A A+ +NG+ + ++++ NWAT ++ K+ T S +V Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWATTPSSQ---KKDTSSSTVVST---------------- 99 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYST 342 + + + V+VG+LS I + D+ F G I + RV +D KG+GFV + Sbjct: 100 -QRSQNHFHVFVGDLSPQITTEDIKAAFAPFGR--ISDARVVKDMATGKSKGYGFVSFFN 156 Query: 343 HEEAAQAIQTGNGQLIGGRQIKCSWGSK 426 +A AIQ GQ +GGRQI+ +W ++ Sbjct: 157 KWDAENAIQQMGGQWLGGRQIRTNWATR 184 Score = 42.0 bits (97), Expect = 0.003 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG----FGFVRYSTHEEAAQAIQT 372 T+YVGNLS D+ + + F +G + ++ D + FV + H AA A+ Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGP--CKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAA 65 Query: 373 GNGQLIGGRQIKCSWGS 423 NG+ I G+++K +W + Sbjct: 66 MNGRKIMGKEVKVNWAT 82
>P19683:ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 315 Score = 66.2 bits (160), Expect = 1e-10 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 6/106 (5%) Frame = +1 Query: 100 QSTDSKGMVELISGSSEAGKENANEDGPE--DNPQYTTVYVGNLSHDIDSNDVHRFFHLL 273 + T+ +G VE + + E+ + A+E+ E + P+ ++VGNL +D+DS + R F Sbjct: 100 EETEEEGFVEAVGDAGESDEVEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQA 159 Query: 274 GAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTGNGQLIGGR 399 G I EV RD +GFGFV ST EEA +A++ N + GR Sbjct: 160 GVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGR 205 Score = 42.0 bits (97), Expect = 0.003 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 4/97 (4%) Frame = +1 Query: 130 LISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFH----LLGAGSIEEV 297 L++ + A + E P Q +YVGN+ ID + + F ++ A + + Sbjct: 206 LLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDR 265 Query: 298 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 R +GFGFV ++ E + AI +GQ + GR I+ Sbjct: 266 ETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIR 302
>P28644:ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast - Spinacia oleracea (Spinach)| Length = 233 Score = 61.6 bits (148), Expect = 4e-09 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 7/121 (5%) Frame = +1 Query: 64 WATKGANAGEVKQSTDSKGMVELISG---SSEAGKENANEDGPEDNPQYTTVYVGNLSHD 234 W +G+ ++ +D +G V S S E G E G + P+ ++VGNL +D Sbjct: 8 WEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQ--GFSEPPEEAKLFVGNLPYD 65 Query: 235 IDSNDVHRFFHLLGAGSIEEV----RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQ 402 +DS + F G I EV R +GFGFV ST EEA +A++ NG + GRQ Sbjct: 66 VDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQ 125 Query: 403 I 405 + Sbjct: 126 L 126 Score = 52.0 bits (123), Expect = 3e-06 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 16/123 (13%) Frame = +1 Query: 88 GEVKQST--DSKGMVELISGSSEAGKE-NANEDGPEDNPQYTT---------VYVGNLSH 231 G V ST +++ VEL++G G++ N+ P +P+ VYVGNL Sbjct: 99 GFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSCRVYVGNLPW 158 Query: 232 DIDSNDVHRFFH----LLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGR 399 D+D++ + + F ++ A + + R +GFGFV S+ E AI +GQ + GR Sbjct: 159 DVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGR 218 Query: 400 QIK 408 ++ Sbjct: 219 AVR 221
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 56.2 bits (134), Expect = 2e-07 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGF 321 +E A E D +T V+V N+ DID + F G E V+V RD KGF Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELF--CEYGPTESVKVIRDASGKSKGF 241 Query: 322 GFVRYSTHEEAAQAIQTGNGQLIGGR 399 GFVRY THE A +A+ +G+ I G+ Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGK 267 Score = 43.9 bits (102), Expect = 8e-04 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEV--RVTRDKGFGFVRYSTHEEAA 357 + P +Y+ NL I+ + F G+ S +V V + KGFG V +S+ EEA Sbjct: 296 KSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEAT 355 Query: 358 QAIQTGNGQLIGGRQIKCSWG 420 +A+ NG+++G + + + G Sbjct: 356 KAVDEMNGRIVGSKPLHVTLG 376
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 56.2 bits (134), Expect = 2e-07 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGF 321 +E A E D +T V+V N+ DID + F G E V+V RD KGF Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELF--CEYGPTESVKVIRDASGKSKGF 241 Query: 322 GFVRYSTHEEAAQAIQTGNGQLIGGR 399 GFVRY THE A +A+ +G+ I G+ Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGK 267 Score = 43.9 bits (102), Expect = 8e-04 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEV--RVTRDKGFGFVRYSTHEEAA 357 + P +Y+ NL I+ + F G+ S +V V + KGFG V +S+ EEA Sbjct: 296 KSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEAT 355 Query: 358 QAIQTGNGQLIGGRQIKCSWG 420 +A+ NG+++G + + + G Sbjct: 356 KAVDEMNGRIVGSKPLHVTLG 376
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 56.2 bits (134), Expect = 2e-07 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGF 321 +E A E D +T V+V N+ DID + F G E V+V RD KGF Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELF--CEYGPTESVKVIRDASGKSKGF 241 Query: 322 GFVRYSTHEEAAQAIQTGNGQLIGGR 399 GFVRY THE A +A+ +G+ I G+ Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGK 267 Score = 43.5 bits (101), Expect = 0.001 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEV--RVTRDKGFGFVRYSTHEEAA 357 + P +Y+ NL I+ + F G+ S +V V + KGFG V +S+ EEA Sbjct: 296 KSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEAT 355 Query: 358 QAIQTGNGQLIGGRQIKCSWG 420 +A+ NG+++G + + + G Sbjct: 356 KAVDEMNGRVVGSKPLHVTLG 376
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 56.2 bits (134), Expect = 2e-07 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGF 321 +E A E D +T V+V N+ DID + F G E V+V RD KGF Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELF--CEYGPTESVKVIRDASGKSKGF 241 Query: 322 GFVRYSTHEEAAQAIQTGNGQLIGGR 399 GFVRY THE A +A+ +G+ I G+ Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGK 267 Score = 43.9 bits (102), Expect = 8e-04 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEV--RVTRDKGFGFVRYSTHEEAA 357 + P +Y+ NL I+ + F G+ S +V V + KGFG V +S+ EEA Sbjct: 296 KSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEAT 355 Query: 358 QAIQTGNGQLIGGRQIKCSWG 420 +A+ NG+++G + + + G Sbjct: 356 KAVDEMNGRIVGSKPLHVTLG 376
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 56.2 bits (134), Expect = 2e-07 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGF 321 +E A E D +T V+V N+ DID + F G E V+V RD KGF Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELF--CEYGPTESVKVIRDASGKSKGF 241 Query: 322 GFVRYSTHEEAAQAIQTGNGQLIGGR 399 GFVRY THE A +A+ +G+ I G+ Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGK 267 Score = 43.9 bits (102), Expect = 8e-04 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEV--RVTRDKGFGFVRYSTHEEAA 357 + P +Y+ NL I+ + F G+ S +V V + KGFG V +S+ EEA Sbjct: 296 KSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEAT 355 Query: 358 QAIQTGNGQLIGGRQIKCSWG 420 +A+ NG+++G + + + G Sbjct: 356 KAVDEMNGRIVGSKPLHVTLG 376
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 56.2 bits (134), Expect = 2e-07 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGF 321 +E A E D +T V+V N+ DID + F G E V+V RD KGF Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELF--CEYGPTESVKVIRDASGKSKGF 241 Query: 322 GFVRYSTHEEAAQAIQTGNGQLIGGR 399 GFVRY THE A +A+ +G+ I G+ Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGK 267 Score = 43.9 bits (102), Expect = 8e-04 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEV--RVTRDKGFGFVRYSTHEEAA 357 + P +Y+ NL I+ + F G+ S +V V + KGFG V +S+ EEA Sbjct: 296 KSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEAT 355 Query: 358 QAIQTGNGQLIGGRQIKCSWG 420 +A+ NG+++G + + + G Sbjct: 356 KAVDEMNGRIVGSKPLHVTLG 376
>O13759:CSX1_SCHPO RNA-binding post-transcriptional regulator csx1 -| Schizosaccharomyces pombe (Fission yeast) Length = 632 Score = 55.5 bits (132), Expect = 3e-07 Identities = 40/139 (28%), Positives = 64/139 (46%) Frame = +1 Query: 4 QTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDGP 183 Q A+ + G R +R + A+ + A S + G+V + N+D Sbjct: 238 QHALMHMQGYLCQGRPLRISVASPKSRASIAADS--ALGIVP-----TSTSNRQPNQDLC 290 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQA 363 +P TTV+VG L+ ++ D+ F G I +++ KG GFV+YS A +A Sbjct: 291 SMDPLNTTVFVGGLASNLSEKDLQVCFQPFGR--ILNIKIPFGKGCGFVQYSEKSAAEKA 348 Query: 364 IQTGNGQLIGGRQIKCSWG 420 I T G L+G I+ +WG Sbjct: 349 INTMQGALVGTSHIRLAWG 367 Score = 31.2 bits (69), Expect = 5.2 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Frame = +1 Query: 190 NPQYTTVYVGNLSHDIDSNDVHRFFHLL-----GAGSIEEVRVTRDKGFGFVRYSTHEEA 354 +P+++ ++VG+L + +D+ F + A I + + +GFVR+S+ +E Sbjct: 179 DPEFS-IFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQ 237 Query: 355 AQAIQTGNGQLIGGRQIKCSWGS 423 A+ G L GR ++ S S Sbjct: 238 QHALMHMQGYLCQGRPLRISVAS 260
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 53.1 bits (126), Expect = 1e-06 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 2/137 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ A++E+NGK L +QI A K +V++ T+ K E + + N Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQK-----KVERQTELKRKFEQMKQDRITRYQGVN--- 295 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT--RDKGFGFVRYSTHEEA 354 +YV NL ID + + F G + +V + R KGFGFV +S+ EEA Sbjct: 296 ---------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEA 346 Query: 355 AQAIQTGNGQLIGGRQI 405 +A+ NG+++ + + Sbjct: 347 TKAVTEMNGRIVATKPL 363 Score = 50.1 bits (118), Expect = 1e-05 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---R 309 G ++ KE E G ++T VY+ N D+D + F G +V + Sbjct: 171 GRFKSRKEREAELGARAK-EFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK 229 Query: 310 DKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 405 KGFGFV + HE+A +A+ NG+ + G+QI Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Score = 40.8 bits (94), Expect = 0.007 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 +++ NL ID+ ++ F G +I +V D KG+GFV + T E A +AI+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFG--NILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM 158 Query: 376 NGQLIGGRQI 405 NG L+ R++ Sbjct: 159 NGMLLNDRKV 168
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 53.1 bits (126), Expect = 1e-06 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 2/137 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ A++E+NGK L +QI A K +V++ T+ K E + + N Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQK-----KVERQTELKRKFEQMKQDRITRYQGVN--- 295 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT--RDKGFGFVRYSTHEEA 354 +YV NL ID + + F G + +V + R KGFGFV +S+ EEA Sbjct: 296 ---------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEA 346 Query: 355 AQAIQTGNGQLIGGRQI 405 +A+ NG+++ + + Sbjct: 347 TKAVTEMNGRIVATKPL 363 Score = 49.3 bits (116), Expect = 2e-05 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---R 309 G ++ KE E G ++T VY+ N D+D + F G +V + Sbjct: 171 GRFKSRKEREAELGARAK-EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229 Query: 310 DKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 405 KGFGFV + HE+A +A+ NG+ + G+QI Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Score = 40.8 bits (94), Expect = 0.007 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 +++ NL ID+ ++ F G +I +V D KG+GFV + T E A +AI+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFG--NILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM 158 Query: 376 NGQLIGGRQI 405 NG L+ R++ Sbjct: 159 NGMLLNDRKV 168
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 53.1 bits (126), Expect = 1e-06 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 2/137 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ A++E+NGK L +QI A K +V++ T+ K E + + N Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQK-----KVERQTELKRKFEQMKQDRITRYQGVN--- 295 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT--RDKGFGFVRYSTHEEA 354 +YV NL ID + + F G + +V + R KGFGFV +S+ EEA Sbjct: 296 ---------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEA 346 Query: 355 AQAIQTGNGQLIGGRQI 405 +A+ NG+++ + + Sbjct: 347 TKAVTEMNGRIVATKPL 363 Score = 50.1 bits (118), Expect = 1e-05 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---R 309 G ++ KE E G ++T VY+ N D+D + F G +V + Sbjct: 171 GRFKSQKEREAELGARAK-EFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK 229 Query: 310 DKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 405 KGFGFV + HE+A +A+ NG+ + G+QI Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Score = 40.8 bits (94), Expect = 0.007 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 +++ NL ID+ ++ F G +I +V D KG+GFV + T E A +AI+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFG--NILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM 158 Query: 376 NGQLIGGRQI 405 NG L+ R++ Sbjct: 159 NGMLLNDRKV 168
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 53.1 bits (126), Expect = 1e-06 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 2/137 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ A++E+NGK L +QI A K +V++ T+ K E + + N Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQK-----KVERQTELKRKFEQMKQDRITRYQGVN--- 295 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT--RDKGFGFVRYSTHEEA 354 +YV NL ID + + F G + +V + R KGFGFV +S+ EEA Sbjct: 296 ---------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEA 346 Query: 355 AQAIQTGNGQLIGGRQI 405 +A+ NG+++ + + Sbjct: 347 TKAVTEMNGRIVATKPL 363 Score = 49.3 bits (116), Expect = 2e-05 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---R 309 G ++ KE E G ++T VY+ N D+D + F G +V + Sbjct: 171 GRFKSRKEREAELGARAK-EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229 Query: 310 DKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 405 KGFGFV + HE+A +A+ NG+ + G+QI Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Score = 40.8 bits (94), Expect = 0.007 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 +++ NL ID+ ++ F G +I +V D KG+GFV + T E A +AI+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFG--NILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM 158 Query: 376 NGQLIGGRQI 405 NG L+ R++ Sbjct: 159 NGMLLNDRKV 168
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 53.1 bits (126), Expect = 1e-06 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 2/137 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ A++E+NGK L +QI A K +V++ T+ K E + + N Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQK-----KVERQTELKRKFEQMKQDRITRYQGVN--- 295 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT--RDKGFGFVRYSTHEEA 354 +YV NL ID + + F G + +V + R KGFGFV +S+ EEA Sbjct: 296 ---------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEA 346 Query: 355 AQAIQTGNGQLIGGRQI 405 +A+ NG+++ + + Sbjct: 347 TKAVTEMNGRIVATKPL 363 Score = 49.3 bits (116), Expect = 2e-05 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---R 309 G ++ KE E G ++T VY+ N D+D + F G +V + Sbjct: 171 GRFKSRKEREAELGARAK-EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229 Query: 310 DKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 405 KGFGFV + HE+A +A+ NG+ + G+QI Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Score = 40.8 bits (94), Expect = 0.007 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 +++ NL ID+ ++ F G +I +V D KG+GFV + T E A +AI+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFG--NILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM 158 Query: 376 NGQLIGGRQI 405 NG L+ R++ Sbjct: 159 NGMLLNDRKV 168
>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 629 Score = 52.8 bits (125), Expect = 2e-06 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Frame = +1 Query: 196 QYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---RDKGFGFVRYSTHEEAAQAI 366 ++T VY+ N D+D + F G +V + R +GFGFV Y HEEA +A+ Sbjct: 189 EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAV 248 Query: 367 QTGNGQLIGGRQI 405 NG+ + GR I Sbjct: 249 SEMNGKEVNGRMI 261 Score = 47.0 bits (110), Expect = 9e-05 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 3/138 (2%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANA-GEVKQSTDSKGMVELISGSSEAGKENANED 177 AQ A++E+NGK + R I A K GE+K+ + + +E N Sbjct: 244 AQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFE------------QIKQERINRY 291 Query: 178 GPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT--RDKGFGFVRYSTHEE 351 Q +YV NL ID + + + F G + +V KGFGFV +S+ EE Sbjct: 292 ------QGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEE 345 Query: 352 AAQAIQTGNGQLIGGRQI 405 A +A+ NG+++ + + Sbjct: 346 ATKAVTEMNGRIVSTKPL 363 Score = 43.5 bits (101), Expect = 0.001 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 V++ NL ID+ ++ F G +I +V D +G+GFV + T E A +AIQT Sbjct: 101 VFIKNLDESIDNKALYDTFSAFG--NILSCKVVCDEHGSRGYGFVHFETQEAANRAIQTM 158 Query: 376 NGQLIGGRQI 405 NG L+ R++ Sbjct: 159 NGMLLNDRKV 168
>Q98SP8:EPABA_XENLA Embryonic polyadenylate-binding protein-A - Xenopus laevis (African| clawed frog) Length = 629 Score = 52.8 bits (125), Expect = 2e-06 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Frame = +1 Query: 196 QYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---RDKGFGFVRYSTHEEAAQAI 366 ++T VY+ N D+D + F G +V + R +GFGFV Y HEEA +A+ Sbjct: 189 EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAV 248 Query: 367 QTGNGQLIGGRQI 405 NG+ + GR I Sbjct: 249 SEMNGKEVNGRMI 261 Score = 49.3 bits (116), Expect = 2e-05 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 4/139 (2%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ A++E+NGK + R I A K +++ ++ K E I +E N Sbjct: 244 AQKAVSEMNGKEVNGRMIYVGRAQK-----RIERQSELKRKFEQIK------QERINRY- 291 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHE 348 Q +YV NL ID + + + F L G+I +V + KGFGFV +S+ E Sbjct: 292 -----QGVNLYVKNLDDGIDDDRLRKEF--LPYGTITSAKVMTEGGHSKGFGFVCFSSPE 344 Query: 349 EAAQAIQTGNGQLIGGRQI 405 EA +A+ NG+++ + + Sbjct: 345 EATKAVTEMNGRIVSTKPL 363 Score = 46.6 bits (109), Expect = 1e-04 Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 V++ NL ID+ ++ F G +I +V D +G+GFV + THE A +AIQT Sbjct: 101 VFIKNLDESIDNKALYDTFSAFG--NILSCKVVCDEHGSRGYGFVHFETHEAANRAIQTM 158 Query: 376 NGQLIGGRQI 405 NG L+ R++ Sbjct: 159 NGMLLNDRKV 168
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 52.4 bits (124), Expect = 2e-06 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 2/137 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ A++E+NGK L +QI A K +V++ T+ K E + + N Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQK-----KVERQTELKRTFEQMKQDRITRYQVVN--- 295 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT--RDKGFGFVRYSTHEEA 354 +YV NL ID + + F G + +V + R KGFGFV +S+ EEA Sbjct: 296 ---------LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEA 346 Query: 355 AQAIQTGNGQLIGGRQI 405 +A+ NG+++ + + Sbjct: 347 TKAVTEMNGRIVATKPL 363 Score = 47.4 bits (111), Expect = 7e-05 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---R 309 G ++ KE E G ++ VY+ N D+D + F G +V + Sbjct: 171 GQFKSRKEREAELGARAK-EFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229 Query: 310 DKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 405 KGFGFV + HE+A +A+ NG+ + G+QI Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Score = 41.2 bits (95), Expect = 0.005 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 ++V NL I++ ++ G +I V D KG+GFV + THE A +AI+ Sbjct: 101 IFVKNLDKSINNKALYDTVSAFG--NILSCNVVCDENGSKGYGFVHFETHEAAERAIKKM 158 Query: 376 NGQLIGGRQI 405 NG L+ GR++ Sbjct: 159 NGMLLNGRKV 168
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 51.6 bits (122), Expect = 4e-06 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 5/94 (5%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-- 312 G ++ KE E G + ++T VY+ N ++D + F G V+V RD Sbjct: 171 GRFKSRKEREAELGAKAK-EFTNVYIKNFGEEVDDESLKELFSQFG--KTLSVKVMRDPN 227 Query: 313 ---KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 405 KGFGFV Y HE+A +A++ NG+ I G+ I Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261 Score = 48.9 bits (115), Expect = 2e-05 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 2/137 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A A+ E+NGK + + I A K +V++ + K E + + + N Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQK-----KVERQAELKRKFEQLKQERISRYQGVN--- 295 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT--RDKGFGFVRYSTHEEA 354 +Y+ NL ID + + F G+ + +V + R KGFGFV +S+ EEA Sbjct: 296 ---------LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEA 346 Query: 355 AQAIQTGNGQLIGGRQI 405 +A+ NG+++G + + Sbjct: 347 TKAVTEMNGRIVGSKPL 363 Score = 38.5 bits (88), Expect = 0.032 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 V++ NL ID+ ++ F G +I +V D KG+ FV + T E A +AI+ Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFG--NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKM 158 Query: 376 NGQLIGGRQI 405 NG L+ R++ Sbjct: 159 NGMLLNDRKV 168
>Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - Xenopus laevis (African| clawed frog) Length = 629 Score = 51.6 bits (122), Expect = 4e-06 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Frame = +1 Query: 196 QYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---RDKGFGFVRYSTHEEAAQAI 366 ++T VY+ N D+D + F G +V + R +GFGFV Y HEEA +A+ Sbjct: 189 EFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAV 248 Query: 367 QTGNGQLIGGRQI 405 NG+ + GR + Sbjct: 249 TEMNGKEVNGRMV 261 Score = 46.2 bits (108), Expect = 2e-04 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 3/138 (2%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANA-GEVKQSTDSKGMVELISGSSEAGKENANED 177 AQ A+ E+NGK + R + A K GE+K+ + + +E N Sbjct: 244 AQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFE------------QIKQERINRY 291 Query: 178 GPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT--RDKGFGFVRYSTHEE 351 Q +YV NL ID + + + F G + +V KGFGFV +S+ EE Sbjct: 292 ------QGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEGGHSKGFGFVCFSSPEE 345 Query: 352 AAQAIQTGNGQLIGGRQI 405 A +A+ NG+++ + + Sbjct: 346 ATKAVTEMNGRIVSTKPL 363 Score = 42.7 bits (99), Expect = 0.002 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 V++ NL ID+ ++ F G I +V D +G+GFV + T E A +AIQT Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFG--DILSCKVVCDEYGSRGYGFVHFETQEAANRAIQTM 158 Query: 376 NGQLIGGRQI 405 NG L+ R++ Sbjct: 159 NGMLLNDRKV 168
>P19682:ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 276 Score = 50.1 bits (118), Expect = 1e-05 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 4/88 (4%) Frame = +1 Query: 148 EAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEV----RVTRDK 315 EAG+ ++ ED ++VGNL +DIDS + + F G I EV R + Sbjct: 83 EAGETEEYQEPSED----AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSR 138 Query: 316 GFGFVRYSTHEEAAQAIQTGNGQLIGGR 399 GFGFV ST EEA +A++ + + GR Sbjct: 139 GFGFVTMSTVEEADKAVELYSQYDLNGR 166 Score = 44.3 bits (103), Expect = 6e-04 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 6/99 (6%) Frame = +1 Query: 130 LISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT- 306 L++ + A + + E P +YVGN+ DID + + F G + RV Sbjct: 167 LLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFS--EHGKVVSARVVF 224 Query: 307 -----RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 R +GFGFV S+ E ++AI +GQ + GR I+ Sbjct: 225 DRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIR 263
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 50.1 bits (118), Expect = 1e-05 Identities = 44/143 (30%), Positives = 60/143 (41%), Gaps = 6/143 (4%) Frame = +1 Query: 4 QTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDGP 183 + A + NG L R +R N A K+ GSS +G G Sbjct: 146 EAAAQQFNGYELDGRPLRVN-----AGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGA 200 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT------RDKGFGFVRYSTH 345 + VYVGNLS +D + F G + E RV R KGFGFV Y + Sbjct: 201 GSGNR---VYVGNLSWGVDDMALESLFS--EQGKVVEARVIYDRDSGRSKGFGFVTYDSS 255 Query: 346 EEAAQAIQTGNGQLIGGRQIKCS 414 +E AI++ +G + GRQI+ S Sbjct: 256 QEVQNAIKSLDGADLDGRQIRVS 278 Score = 44.7 bits (104), Expect = 5e-04 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 ++VGNL ++DS + + F AG++E V V DK GFGFV S+ E A Q Sbjct: 93 LFVGNLPFNVDSAQLAQLFE--SAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQ 150 Query: 370 TGNGQLIGGRQIKCSWG 420 NG + GR ++ + G Sbjct: 151 QFNGYELDGRPLRVNAG 167
>P27476:NSR1_YEAST Nuclear localization sequence-binding protein - Saccharomyces| cerevisiae (Baker's yeast) Length = 414 Score = 50.1 bits (118), Expect = 1e-05 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 5/112 (4%) Frame = +1 Query: 91 EVKQSTDSKGMVELISGSSEAGKENANEDGP-EDNPQYTTVYVGNLSHDIDSNDVHRFFH 267 E ++S D K E E +E++N+ E+ + T++VG LS ID + + F Sbjct: 132 EKEESNDKKRKSE--DAEEEEDEESSNKKQKNEETEEPATIFVGRLSWSIDDEWLKKEFE 189 Query: 268 ----LLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKC 411 ++GA I E R +G+G+V + A +AIQ G+ I GR I C Sbjct: 190 HIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINC 241 Score = 50.1 bits (118), Expect = 1e-05 Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 7/148 (4%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGK-ENANED 177 A+ AI E+ GK + R I C+ +T S AG + A + Sbjct: 222 AEKAIQEMQGKEIDGRPINCDMST-----------------------SKPAGNNDRAKKF 258 Query: 178 GPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT------RDKGFGFVRYS 339 G + T+++GNLS + D + + F G + VR+ + KGFG+V++S Sbjct: 259 GDTPSEPSDTLFLGNLSFNADRDAIFELF--AKHGEVVSVRIPTHPETEQPKGFGYVQFS 316 Query: 340 THEEAAQAIQTGNGQLIGGRQIKCSWGS 423 E+A +A+ G+ I R ++ + S Sbjct: 317 NMEDAKKALDALQGEYIDNRPVRLDFSS 344
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 48.9 bits (115), Expect = 2e-05 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 4/111 (3%) Frame = +1 Query: 79 ANAGEVKQSTDSKGMVELISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHR 258 A+ G+V + +S+G V S A E A P + + ++VGNL++D++S + Sbjct: 117 ASEGDVSEGDESEGDV-----SEGAVSERAEFPEPSEEAK---LFVGNLAYDVNSQALAM 168 Query: 259 FFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTGNGQLIGGR 399 F G I EV R+ +GFGFV S+ +EA A++ N + GR Sbjct: 169 LFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGR 219 Score = 45.4 bits (106), Expect = 3e-04 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Frame = +1 Query: 130 LISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT- 306 L++ + A + + E P VYVGNL D+D+ + + F G + E RV Sbjct: 220 LLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFS--EHGKVVEARVVY 277 Query: 307 -----RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 R +GFGFV S +E +AI +GQ + GR I+ Sbjct: 278 DRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIR 316
>Q43349:ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 342 Score = 48.9 bits (115), Expect = 2e-05 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 6/98 (6%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---- 306 G S+ + + +YVGNLS +D + F+ G + E RV Sbjct: 236 GGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFN--EQGKVVEARVIYDRD 293 Query: 307 --RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCS 414 R KGFGFV S+ +E +AI + NG + GRQI+ S Sbjct: 294 SGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVS 331 Score = 47.8 bits (112), Expect = 5e-05 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 13/109 (11%) Frame = +1 Query: 133 ISGSSEAGKENANEDGPEDNPQYTT-------VYVGNLSHDIDSNDVHRFFHLLGAGSIE 291 +S E +++ DG + P ++VGNLS ++DS + + F AG++E Sbjct: 69 VSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFE--SAGNVE 126 Query: 292 EVRVTRDK------GFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 420 V V DK GFGFV ST E A Q NG GR ++ + G Sbjct: 127 MVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAG 175
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 48.9 bits (115), Expect = 2e-05 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 2/137 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ A++++NGK L + I A K +V++ T+ K E + + N Sbjct: 244 AQKAVDDMNGKDLNGKAIFVGRAQK-----KVERQTELKRKFEQMKQDRITRYQGVN--- 295 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT--RDKGFGFVRYSTHEEA 354 +YV NL ID + + F G+ + +V + R KGFGFV +S+ EEA Sbjct: 296 ---------LYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEGGRSKGFGFVCFSSPEEA 346 Query: 355 AQAIQTGNGQLIGGRQI 405 +A+ NG+++ + + Sbjct: 347 TKAVTEMNGRIVATKPL 363 Score = 48.5 bits (114), Expect = 3e-05 Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 3/138 (2%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A+ AI+++NG L +R++ G ++ KE E G Sbjct: 151 AERAIDKMNGMLLNDRKV--------------------------FVGRFKSRKEREAELG 184 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---RDKGFGFVRYSTHEE 351 ++T VY+ N D+D + +F GA +V + +GFGFV + HE+ Sbjct: 185 ARAK-EFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHED 243 Query: 352 AAQAIQTGNGQLIGGRQI 405 A +A+ NG+ + G+ I Sbjct: 244 AQKAVDDMNGKDLNGKAI 261 Score = 40.0 bits (92), Expect = 0.011 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 +++ NL ID+ ++ F G +I +V D KG+GFV + T E A +AI Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFG--NILSCKVVCDENGSKGYGFVHFETQEAAERAIDKM 158 Query: 376 NGQLIGGRQI 405 NG L+ R++ Sbjct: 159 NGMLLNDRKV 168
>Q08937:ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 291 Score = 48.5 bits (114), Expect = 3e-05 Identities = 40/143 (27%), Positives = 57/143 (39%), Gaps = 6/143 (4%) Frame = +1 Query: 4 QTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDGP 183 + A + NG + R IR N A E +G G + G Sbjct: 142 EAAEQQFNGYEIDGRAIRVNAGPAPAKR-ENSSFGGGRGGNSSYGGGRDGNSSFGGARGG 200 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT------RDKGFGFVRYSTH 345 VYVGNLS +D + F G++ + +V R +GFGFV YS+ Sbjct: 201 RSVDSSNRVYVGNLSWGVDDLALKELFS--EQGNVVDAKVVYDRDSGRSRGFGFVTYSSS 258 Query: 346 EEAAQAIQTGNGQLIGGRQIKCS 414 +E AI + NG + GR I+ S Sbjct: 259 KEVNDAIDSLNGVDLDGRSIRVS 281 Score = 46.6 bits (109), Expect = 1e-04 Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 ++VGNL +DS + F AG++E V V DK GFGFV ST EE A Q Sbjct: 89 LFVGNLPFSVDSAALAGLFER--AGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQ 146 Query: 370 TGNGQLIGGRQIKCSWG 420 NG I GR I+ + G Sbjct: 147 QFNGYEIDGRAIRVNAG 163
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 48.5 bits (114), Expect = 3e-05 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 4/139 (2%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ A++E+NGK + + + A K +V++ T+ K E + + N Sbjct: 244 AQKAVDEMNGKDMNGKSMFVGRAQK-----KVERQTELKRKFEQMKQDRITRYQGVN--- 295 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT----RDKGFGFVRYSTHE 348 +YV NL ID + + F L G+I +V R KGFGFV +S+ E Sbjct: 296 ---------LYVKNLDDGIDDERLRKEF--LPFGTITSAKVMMEGGRSKGFGFVCFSSPE 344 Query: 349 EAAQAIQTGNGQLIGGRQI 405 EA +A+ NG+++ + + Sbjct: 345 EATKAVTEMNGRIVATKPL 363 Score = 43.9 bits (102), Expect = 8e-04 Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 3/138 (2%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A+ AI+++NG L +R++ G ++ KE E G Sbjct: 151 AERAIDKMNGMLLNDRKV--------------------------FVGRFKSRKEREAELG 184 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---RDKGFGFVRYSTHEE 351 ++T VY+ N D++ + F G +V + KGFGFV + HE+ Sbjct: 185 ARAK-EFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHED 243 Query: 352 AAQAIQTGNGQLIGGRQI 405 A +A+ NG+ + G+ + Sbjct: 244 AQKAVDEMNGKDMNGKSM 261 Score = 40.0 bits (92), Expect = 0.011 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 +++ NL ID+ ++ F G +I +V D KG+GFV + T E A +AI Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFG--NILSCKVVCDENGSKGYGFVHFETQEAAERAIDKM 158 Query: 376 NGQLIGGRQI 405 NG L+ R++ Sbjct: 159 NGMLLNDRKV 168
>P15771:NUCL_CHICK Nucleolin - Gallus gallus (Chicken)| Length = 694 Score = 48.5 bits (114), Expect = 3e-05 Identities = 34/132 (25%), Positives = 57/132 (43%) Frame = +1 Query: 28 GKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDGPEDNPQYTT 207 G G I + A E KQ T+ G +I + E ++ + + G E + T Sbjct: 405 GSSKGMAYIEFKTEAEAEKALEEKQGTEVDGRAMVIDYTGEKSQQESQKGGGERESK--T 462 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 + V NLS+ + F + + + R KG+ FV + T E+A +A+ + N Sbjct: 463 LIVNNLSYAASEETLQELFKKATSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTE 522 Query: 388 IGGRQIKCSWGS 423 I GR I+ + S Sbjct: 523 IEGRAIRLEFSS 534 Score = 35.0 bits (79), Expect = 0.36 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 11/115 (9%) Frame = +1 Query: 97 KQSTDSKGMVELISGSSEAGKENANEDGPEDNPQYT-------TVYVGNLSHDIDSND-- 249 ++S D K + E + KE AN+ PE + T +++V NL+ D + Sbjct: 242 EESEDEKPVKE---APGKRKKEMANKSAPEAKKKKTETPASAFSLFVKNLTPTKDYEELR 298 Query: 250 --VHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 + FF + EVR+ K FG+V + + E+ +A+Q NG+ + G +IK Sbjct: 299 TAIKEFFGKKNL-QVSEVRIGSSKRFGYVDFLSAEDMDKALQL-NGKKLMGLEIK 351 Score = 33.1 bits (74), Expect = 1.4 Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 5/99 (5%) Frame = +1 Query: 124 VELISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRV 303 +E S S + G NA N Q T++V LS D + F GSI V Sbjct: 530 LEFSSPSWQKGNMNARGGF---NQQSKTLFVRGLSEDTTEETLRESFE----GSISARIV 582 Query: 304 T-RD----KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 405 T RD KGFGFV +S+ E+A A + I G ++ Sbjct: 583 TDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKV 621
>Q09511:RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4 - Caenorhabditis| elegans Length = 196 Score = 48.1 bits (113), Expect = 4e-05 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQA 363 T++ + NLS+ ND+ R F G I +V + RDK GFGFVR+ +A A Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYG--DIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76 Query: 364 IQTGNGQLIGGRQIK 408 + +G+L+ GR+++ Sbjct: 77 LDRTDGKLVDGRELR 91
>Q9NEW6:RSP3_CAEEL Probable splicing factor, arginine/serine-rich 3 - Caenorhabditis| elegans Length = 258 Score = 48.1 bits (113), Expect = 4e-05 Identities = 23/76 (30%), Positives = 36/76 (47%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQ 360 P + VYVGNL D+ +V FH G +++ R F FV + H +A Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAED 61 Query: 361 AIQTGNGQLIGGRQIK 408 A++ +G GR+I+ Sbjct: 62 AVRARDGYEFDGRRIR 77
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 48.1 bits (113), Expect = 4e-05 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%) Frame = +1 Query: 91 EVKQSTDSKGMVELISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHL 270 EV Q D + + +S E E E ++ + +YVGNL + S+ + F Sbjct: 79 EVVQEDDEEEVA--LSAEEEEEIEEKEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAE 136 Query: 271 LGAGSIEEV---RVT-RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 G + E+ RVT R +GF FV + EEA +AI+ +G +GGR +K ++ Sbjct: 137 AGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNF 189 Score = 35.8 bits (81), Expect = 0.21 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 4/140 (2%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A+ AI +G +G R ++ N+ EV + + + M + K + G Sbjct: 168 AKEAIRLFDGSQVGGRTVKVNFP-------EVPRGGEREVM---------SAKIRSTYQG 211 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFH----LLGAGSIEEVRVTRDKGFGFVRYSTHE 348 D+P +YV NLS + S + F + A I + R +GFGF+ +S+ E Sbjct: 212 FVDSPH--KLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAE 269 Query: 349 EAAQAIQTGNGQLIGGRQIK 408 A+ T N + GR ++ Sbjct: 270 AMNSALDTMNEVELEGRPLR 289
>P49314:ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 292 Score = 47.8 bits (112), Expect = 5e-05 Identities = 40/143 (27%), Positives = 57/143 (39%), Gaps = 6/143 (4%) Frame = +1 Query: 4 QTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDGP 183 + A + NG + R IR N A E +G G + G Sbjct: 143 EAAEQQFNGYEIDGRAIRVNAGPAPAKR-ENSSFGGGRGGNSSYGGGRDGNSSFGGARGG 201 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT------RDKGFGFVRYSTH 345 VYVGNLS +D + F G++ + +V R +GFGFV YS+ Sbjct: 202 RSVDSSNRVYVGNLSWGVDDLALKELFS--EQGNVVDAKVVYDRDSGRSRGFGFVTYSSA 259 Query: 346 EEAAQAIQTGNGQLIGGRQIKCS 414 +E AI + NG + GR I+ S Sbjct: 260 KEVNDAIDSLNGIDLDGRSIRVS 282 Score = 46.2 bits (108), Expect = 2e-04 Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 ++VGNL +DS + F AG++E V V DK GFGFV ST EE A Q Sbjct: 90 LFVGNLPFSVDSAALAGLFER--AGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQ 147 Query: 370 TGNGQLIGGRQIKCSWG 420 NG I GR I+ + G Sbjct: 148 QFNGYEIDGRAIRVNAG 164
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 47.8 bits (112), Expect = 5e-05 Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 5/138 (3%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ AIN +NG L +R++ G ++ +E E G Sbjct: 151 AQQAINTMNGMLLNDRKV--------------------------FVGHFKSRREREAELG 184 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG-----FGFVRYSTH 345 ++T +YV NL D+D + F G + V+V RD FGFV + H Sbjct: 185 ARAL-EFTNIYVKNLPVDVDEQGLQDLFSQFG--KMLSVKVMRDNSGHSRCFGFVNFEKH 241 Query: 346 EEAAQAIQTGNGQLIGGR 399 EEA +A+ NG+ + GR Sbjct: 242 EEAQKAVVHMNGKEVSGR 259 Score = 47.0 bits (110), Expect = 9e-05 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTG 375 +++ NL ID+ ++ F G +I +V D +GFGFV + THE A QAI T Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFG--NILSCKVACDEHGSRGFGFVHFETHEAAQQAINTM 158 Query: 376 NGQLIGGRQI 405 NG L+ R++ Sbjct: 159 NGMLLNDRKV 168 Score = 44.7 bits (104), Expect = 5e-04 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 2/137 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ A+ +NGK + R + A K V++ + K E + + N Sbjct: 244 AQKAVVHMNGKEVSGRLLYAGRAQK-----RVERQNELKRRFEQMKQDRLRRYQGVN--- 295 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT--RDKGFGFVRYSTHEEA 354 +YV NL ID + + + F G + +V KGFGFV +S+ EEA Sbjct: 296 ---------LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEA 346 Query: 355 AQAIQTGNGQLIGGRQI 405 +A+ NG+++G + + Sbjct: 347 TKAVTEMNGRIVGTKPL 363
>O09032:ELAV4_RAT ELAV-like protein 4 - Rattus norvegicus (Rat)| Length = 373 Score = 47.0 bits (110), Expect = 9e-05 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 ++V NLS D D + + + F GA + V+V RD KGFGFV + ++EAA AI Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGA--VNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 349 Query: 370 TGNGQLIGGRQIKCSW 417 + NG +G R ++ S+ Sbjct: 350 SLNGYRLGDRVLQVSF 365
>Q61701:ELAV4_MOUSE ELAV-like protein 4 - Mus musculus (Mouse)| Length = 385 Score = 47.0 bits (110), Expect = 9e-05 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 ++V NLS D D + + + F GA + V+V RD KGFGFV + ++EAA AI Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGA--VNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 361 Query: 370 TGNGQLIGGRQIKCSW 417 + NG +G R ++ S+ Sbjct: 362 SLNGYRLGDRVLQVSF 377
>P26378:ELAV4_HUMAN ELAV-like protein 4 - Homo sapiens (Human)| Length = 380 Score = 47.0 bits (110), Expect = 9e-05 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 ++V NLS D D + + + F GA + V+V RD KGFGFV + ++EAA AI Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGA--VNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 356 Query: 370 TGNGQLIGGRQIKCSW 417 + NG +G R ++ S+ Sbjct: 357 SLNGYRLGDRVLQVSF 372
>Q08935:ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 273 Score = 46.6 bits (109), Expect = 1e-04 Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 9/92 (9%) Frame = +1 Query: 172 EDGPEDNPQYTT---VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFG 324 +DG E+ ++ ++VGNL DS + F AG++E V V DK GFG Sbjct: 74 DDGVEEERNFSPDLKIFVGNLPFSADSAALAELFER--AGNVEMVEVIYDKLTGRSRGFG 131 Query: 325 FVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 420 FV S+ EE A Q NG + GR ++ + G Sbjct: 132 FVTMSSKEEVEAACQQFNGYELDGRALRVNSG 163 Score = 45.8 bits (107), Expect = 2e-04 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 4/141 (2%) Frame = +1 Query: 4 QTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDGP 183 + A + NG L R +R N E ++++ +G GS G +++ Sbjct: 142 EAACQQFNGYELDGRALRVN----SGPPPEKRENSSFRG------GSRGGGSFDSSN--- 188 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEE 351 VYVGNL+ +D + + F G +V RD +GFGFV YS+ EE Sbjct: 189 -------RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEE 241 Query: 352 AAQAIQTGNGQLIGGRQIKCS 414 AI++ +G + GR I+ S Sbjct: 242 VNNAIESLDGVDLNGRAIRVS 262
>P49313:ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 279 Score = 46.6 bits (109), Expect = 1e-04 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 4/141 (2%) Frame = +1 Query: 4 QTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDGP 183 + A + NG L R +R N E ++++ + GS G +++ Sbjct: 142 EAACQQFNGYELDGRALRVN----SGPPPEKRENSSFRENSSFRGGSRGGGSFDSSN--- 194 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEE 351 VYVGNL+ +D + + F G +V RD +GFGFV YS+ EE Sbjct: 195 -------RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEE 247 Query: 352 AAQAIQTGNGQLIGGRQIKCS 414 AI++ +G + GR I+ S Sbjct: 248 VNNAIESLDGVDLNGRAIRVS 268 Score = 44.7 bits (104), Expect = 5e-04 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%) Frame = +1 Query: 172 EDGPEDNPQYTT---VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFG 324 ++G E+ ++ ++VGNL DS + F AG++E V V DK GFG Sbjct: 74 DEGVEEERNFSPDLKIFVGNLLFSADSAALAELFER--AGNVEMVEVIYDKLTGRSRGFG 131 Query: 325 FVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 420 FV S+ EE A Q NG + GR ++ + G Sbjct: 132 FVTMSSKEEVEAACQQFNGYELDGRALRVNSG 163
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 46.6 bits (109), Expect = 1e-04 Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD---KGFGF 327 KE E G E +T VYV N + D D + FF G + +V D KGFGF Sbjct: 169 KEREKELG-EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGF 227 Query: 328 VRYSTHEEAAQAIQTGNGQLIG 393 V + T E A A+Q NG+ +G Sbjct: 228 VAFETTEAAEAAVQALNGKDMG 249 Score = 40.4 bits (93), Expect = 0.009 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFGFVRYSTHEEAAQAIQT 372 V++ NL ID+ ++ F G +I +V D KG+GFV + T E A +I Sbjct: 92 VFIKNLDRAIDNKAIYDTFSAFG--NILSCKVATDEKGNSKGYGFVHFETEEAANTSIDK 149 Query: 373 GNGQLIGGRQI 405 NG L+ G+++ Sbjct: 150 VNGMLLNGKKV 160 Score = 35.8 bits (81), Expect = 0.21 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---RDKGFGFVRYSTHEEAAQAIQTGN 378 +YV NL ID + + F G + +V R KGFGFV ++ EA A+ N Sbjct: 289 LYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELN 348 Query: 379 GQLIGGRQI 405 G+++G + + Sbjct: 349 GRVVGSKPL 357
>O60176:YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c - Schizosaccharomyces| pombe (Fission yeast) Length = 473 Score = 46.2 bits (108), Expect = 2e-04 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 2/141 (1%) Frame = +1 Query: 4 QTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSE-AGKENANEDG 180 ++A+ E+ G+ G+R IR AT + A V ++ S G +A + Sbjct: 242 KSALAEMQGQICGDRPIRVGLATPKSKAHVFSP-------VNVVPVSMPPVGFYSAAQPV 294 Query: 181 PE-DNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAA 357 P+ + +TV+VG LS + ++ F G I V++ KG GFV++ + A Sbjct: 295 PQFADTANSTVFVGGLSKFVSEEELKYLFQ--NFGEIVYVKIPPGKGCGFVQFVNRQSAE 352 Query: 358 QAIQTGNGQLIGGRQIKCSWG 420 AI G +G +I+ SWG Sbjct: 353 IAINQLQGYPLGNSRIRLSWG 373 Score = 37.0 bits (84), Expect = 0.094 Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 5/73 (6%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFF-----HLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQ 369 +++VG+LS +++ DV+ F A + + + +G+GFVR++ + A+ Sbjct: 187 SIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALA 246 Query: 370 TGNGQLIGGRQIK 408 GQ+ G R I+ Sbjct: 247 EMQGQICGDRPIR 259
>P32588:PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 453 Score = 45.8 bits (107), Expect = 2e-04 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 16/133 (12%) Frame = +1 Query: 67 ATKGANAGEVKQSTD-SKGMVELISGSSEAGKENANEDGPEDNPQYT----------TVY 213 A + +A E S D S + G+SE ++N E+ P P +Y Sbjct: 19 AVETPSAVEAPASADPSSEQSVAVEGNSEQAEDNQGENDPSVVPANAITGGRETSDRVLY 78 Query: 214 VGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG-----FGFVRYSTHEEAAQAIQTGN 378 VGNL I + + ++F + G I +++ DK + FV Y +A A+QT N Sbjct: 79 VGNLDKAITEDILKQYFQV--GGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLN 136 Query: 379 GQLIGGRQIKCSW 417 G+ I +K +W Sbjct: 137 GKQIENNIVKINW 149 Score = 45.8 bits (107), Expect = 2e-04 Identities = 25/78 (32%), Positives = 38/78 (48%) Frame = +1 Query: 193 PQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQT 372 P+ TT Y+GN+ H D+ F G I + + +KG F++Y THE+AA I Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQ--NFGFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 395 Query: 373 GNGQLIGGRQIKCSWGSK 426 GR ++ WG + Sbjct: 396 LANFPFQGRNLRTGWGKE 413 Score = 44.3 bits (103), Expect = 6e-04 Identities = 29/146 (19%), Positives = 65/146 (44%), Gaps = 4/146 (2%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A A+ LNGK + N ++ NWA + ++++++D Sbjct: 128 ANIALQTLNGKQIENNIVKINWAFQ--------------------------SQQSSSDD- 160 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEVRVTRDKGFGFVRYSTHE 348 ++VG+L+ ++D + F L + +++ +G+GFV +++ + Sbjct: 161 ------TFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQD 214 Query: 349 EAAQAIQTGNGQLIGGRQIKCSWGSK 426 +A A+ + GQ + GR ++ +W +K Sbjct: 215 DAQNAMDSMQGQDLNGRPLRINWAAK 240
>Q8CH84:ELAV2_RAT ELAV-like protein 2 - Rattus norvegicus (Rat)| Length = 359 Score = 45.8 bits (107), Expect = 2e-04 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 ++V NL+ D D + + + F GA + V+V RD KGFGFV + ++EAA AI Sbjct: 278 IFVYNLAPDADESILWQMFGPFGA--VTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 335 Query: 370 TGNGQLIGGRQIKCSW 417 + NG +G R ++ S+ Sbjct: 336 SLNGYRLGDRVLQVSF 351
>Q5R9Z6:ELAV2_PONPY ELAV-like protein 2 - Pongo pygmaeus (Orangutan)| Length = 359 Score = 45.8 bits (107), Expect = 2e-04 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 ++V NL+ D D + + + F GA + V+V RD KGFGFV + ++EAA AI Sbjct: 278 IFVYNLAPDADESILWQMFGPFGA--VTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 335 Query: 370 TGNGQLIGGRQIKCSW 417 + NG +G R ++ S+ Sbjct: 336 SLNGYRLGDRVLQVSF 351
>Q60899:ELAV2_MOUSE ELAV-like protein 2 - Mus musculus (Mouse)| Length = 360 Score = 45.8 bits (107), Expect = 2e-04 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 ++V NL+ D D + + + F GA + V+V RD KGFGFV + ++EAA AI Sbjct: 279 IFVYNLAPDADESILWQMFGPFGA--VTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 336 Query: 370 TGNGQLIGGRQIKCSW 417 + NG +G R ++ S+ Sbjct: 337 SLNGYRLGDRVLQVSF 352
>Q12926:ELAV2_HUMAN ELAV-like protein 2 - Homo sapiens (Human)| Length = 359 Score = 45.8 bits (107), Expect = 2e-04 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 ++V NL+ D D + + + F GA + V+V RD KGFGFV + ++EAA AI Sbjct: 278 IFVYNLAPDADESILWQMFGPFGA--VTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 335 Query: 370 TGNGQLIGGRQIKCSW 417 + NG +G R ++ S+ Sbjct: 336 SLNGYRLGDRVLQVSF 351
>Q924M5:BOLL_MOUSE Protein boule-like - Mus musculus (Mouse)| Length = 281 Score = 45.8 bits (107), Expect = 2e-04 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%) Frame = +1 Query: 175 DGPEDNPQYTTV-----YVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFG 324 + P P+Y TV +VG + + ND+ +FF G S++EV++ D KG+G Sbjct: 19 NNPTSGPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYG--SVKEVKIVNDRAGVSKGYG 76 Query: 325 FVRYSTHEEAAQAIQ 369 F+ + T E+A + +Q Sbjct: 77 FITFETQEDAQKILQ 91
>Q6DJI9:ZCRB1_XENLA Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Xenopus laevis (African clawed frog) Length = 218 Score = 45.1 bits (105), Expect = 3e-04 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Frame = +1 Query: 193 PQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEA 354 P +TVYV NL + +ND+HR F G + +V + +D KG FV + E A Sbjct: 7 PSKSTVYVSNLPFSLTNNDLHRIFSKY--GKVVKVTILKDKDSRKSKGVSFVLFLDKESA 64 Query: 355 AQAIQTGNGQLIGGRQIKCS 414 ++ N + + GR IK S Sbjct: 65 QNCVRGLNNKQLFGRAIKAS 84
>Q10355:YDB2_SCHPO Uncharacterized RNA-binding protein C22E12.02 - Schizosaccharomyces| pombe (Fission yeast) Length = 219 Score = 45.1 bits (105), Expect = 3e-04 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK-----GFGFVRYSTHE 348 E +P + ++VGNL +D++ +++ F S+ + +V RD+ GFGFV + + Sbjct: 24 EWDPNHFRLFVGNLGNDVNDESLYQAFSEYP--SLVKTKVVRDREGKTRGFGFVSFKDSD 81 Query: 349 EAAQAIQTGNGQLIGGRQIKCS 414 + +A + NG+ IG R +K S Sbjct: 82 QFLKAWREKNGKYIGSRPVKLS 103
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 45.1 bits (105), Expect = 3e-04 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLG---AGSIEEVRVTRDKGFGFVRYSTHEEA 354 E YT +YV N++ + F G + S+E+ + KGFGFV Y HE+A Sbjct: 213 ETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDA 272 Query: 355 AQAIQTGNGQLIGGRQI 405 +A++ N + G ++ Sbjct: 273 VKAVEALNDSELNGEKL 289 Score = 42.7 bits (99), Expect = 0.002 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Frame = +1 Query: 196 QYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---RDKGFGFVRYSTHEEAAQAI 366 Q ++V NL +D + F G + +V T + KGFGFV +ST EEA +AI Sbjct: 320 QGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAI 379 Query: 367 QTGNGQLIGGRQI 405 N Q++ G+ + Sbjct: 380 TEKNQQIVAGKPL 392 Score = 41.2 bits (95), Expect = 0.005 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLG---AGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGN 378 +++ NL DID+ ++ F + G + I + KGFGFV + A +AI N Sbjct: 128 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALN 187 Query: 379 GQLIGGRQI 405 G L+ G++I Sbjct: 188 GMLLNGQEI 196
>Q60900:ELAV3_MOUSE ELAV-like protein 3 - Mus musculus (Mouse)| Length = 367 Score = 45.1 bits (105), Expect = 3e-04 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 ++V NLS + D + + + F GA + V+V RD KGFGFV + ++EAA AI Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGA--VTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIA 343 Query: 370 TGNGQLIGGRQIKCSW 417 + NG +G R ++ S+ Sbjct: 344 SLNGYRLGERVLQVSF 359
>Q14576:ELAV3_HUMAN ELAV-like protein 3 - Homo sapiens (Human)| Length = 367 Score = 45.1 bits (105), Expect = 3e-04 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 ++V NLS + D + + + F GA + V+V RD KGFGFV + ++EAA AI Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGA--VTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIA 343 Query: 370 TGNGQLIGGRQIKCSW 417 + NG +G R ++ S+ Sbjct: 344 SLNGYRLGERVLQVSF 359
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 45.1 bits (105), Expect = 3e-04 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 +++ NL D D + + F GA + V+V RD KGFGFV + +EEAA AI Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGA--VTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIA 303 Query: 370 TGNGQLIGGRQIKCSW 417 + NG +G + ++ S+ Sbjct: 304 SLNGYRLGDKILQVSF 319
>P42696:RBM34_HUMAN RNA-binding protein 34 - Homo sapiens (Human)| Length = 430 Score = 44.7 bits (104), Expect = 5e-04 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 6/69 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAI 366 +V+VGNL + ++ + + + H L GSI VR+ RDK GFG+V + + A+ Sbjct: 288 SVFVGNLPYKVEESAIEK--HFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLAL 345 Query: 367 QTGNGQLIG 393 + N +L+G Sbjct: 346 KLNNSELMG 354
>Q5ZM16:RBM22_CHICK Pre-mRNA-splicing factor RBM22 - Gallus gallus (Chicken)| Length = 420 Score = 44.7 bits (104), Expect = 5e-04 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQ 360 P D+ TT+YVG L I +D+ F+ G I + V + + F++++T + A Sbjct: 225 PPDDKTITTLYVGGLGDTITESDLRNHFYQF--GEIRTITVVQRQQCAFIQFATRQAAEV 282 Query: 361 AIQTG-NGQLIGGRQIKCSWG 420 A + N ++ GR++ WG Sbjct: 283 AAEKSFNKLIVNGRRLNVKWG 303
>P41891:GAR2_SCHPO Protein gar2 - Schizosaccharomyces pombe (Fission yeast)| Length = 500 Score = 44.7 bits (104), Expect = 5e-04 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 15/124 (12%) Frame = +1 Query: 79 ANAGEVKQSTDSKGMVELISGSSEAGK----ENANEDGP-------EDNPQYTTVYVGNL 225 + +G+ S+DS+ SSE K E A+E+ P +D+ + TV+VG L Sbjct: 216 SESGDSDSSSDSES-----ESSSEDEKKRKAEPASEERPAKITKPSQDSNETCTVFVGRL 270 Query: 226 SHDIDSNDVHRFFH----LLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIG 393 S ++D + + F ++GA I + + R KG+G+V + T E A A+ + I Sbjct: 271 SWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEID 330 Query: 394 GRQI 405 GR + Sbjct: 331 GRMV 334 Score = 44.7 bits (104), Expect = 5e-04 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KG 318 ++ A G + + TV+VGNLS + +D+ F G G I+ +R+ D KG Sbjct: 351 QQRAGNFGDQLSEPSDTVFVGNLSFNATEDDLSTAFG--GCGDIQSIRLPTDPQSGRLKG 408 Query: 319 FGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGS 423 FG+V +S + A + ++ NG I GR + + + Sbjct: 409 FGYVTFSDIDSAKKCVEM-NGHFIAGRPCRLDFST 442
>P82277:RRP2_SPIOL Plastid-specific 30S ribosomal protein 2, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 260 Score = 44.3 bits (103), Expect = 6e-04 Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 6/142 (4%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVK--QSTDSKGMVELISGSSEAGKENANE 174 A I +LN +G R+I+ N K ++ Q+ DS+ + Sbjct: 138 ANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFV----------------- 180 Query: 175 DGPEDNPQYTTVYVGNLSHDIDSNDVHRFFH----LLGAGSIEEVRVTRDKGFGFVRYST 342 ++P VY+GNL+ + + + FF +LGA ++ GFGFV +S+ Sbjct: 181 ----ESPY--KVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSS 234 Query: 343 HEEAAQAIQTGNGQLIGGRQIK 408 EE AIQ N ++ G++I+ Sbjct: 235 EEEVEAAIQALNNSVLEGQKIR 256 Score = 41.6 bits (96), Expect = 0.004 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 4/92 (4%) Frame = +1 Query: 145 SEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG-- 318 +E ++ D +YVGN+ +++++++ GA I EV + G Sbjct: 65 TEETSSSSTASSSSDGEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRS 124 Query: 319 --FGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 FGFV T E+A I+ N IGGR+IK Sbjct: 125 RRFGFVTMKTVEDANAVIEKLNDTEIGGRKIK 156
>P32831:NGR1_YEAST Negative growth regulatory protein NGR1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 672 Score = 44.3 bits (103), Expect = 6e-04 Identities = 26/77 (33%), Positives = 37/77 (48%) Frame = +1 Query: 190 NPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQ 369 +P TTV+VG L + F G I VR+ K GFV++ +A +IQ Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGP--ILNVRIPNGKNCGFVKFEKRIDAEASIQ 413 Query: 370 TGNGQLIGGRQIKCSWG 420 G ++GG I+ SWG Sbjct: 414 GLQGFIVGGSPIRLSWG 430 Score = 30.8 bits (68), Expect = 6.8 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 6/79 (7%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 +++VG+LS D+ F S++ VRV D + FGFVR+ +E +A+ Sbjct: 193 SLFVGDLSPTATEADLLSLFQTRFK-SVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRAL 251 Query: 367 QTGNGQLIGGRQIKCSWGS 423 +G+ GR ++ ++ + Sbjct: 252 IEMSGKWFQGRALRVAYAT 270
>Q00539:NAM8_YEAST Protein NAM8 - Saccharomyces cerevisiae (Baker's yeast)| Length = 523 Score = 44.3 bits (103), Expect = 6e-04 Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 28/167 (16%) Frame = +1 Query: 4 QTAINELNGKWLGNRQIRC----------------NWATKGANAGEVKQSTDSKGMVELI 135 Q A++E+ G +L R I+ N ++ N V SKG L Sbjct: 219 QLALSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLS 278 Query: 136 SGSSEAGKENAN--------EDGPEDN----PQYTTVYVGNLSHDIDSNDVHRFFHLLGA 279 +G++ G + + + P N P TTV++G LS + +++ +F G Sbjct: 279 NGNNNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFG- 337 Query: 280 GSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 420 +I V++ K GFV+Y A AI G I +++ SWG Sbjct: 338 -TIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWG 383 Score = 35.0 bits (79), Expect = 0.36 Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 6/128 (4%) Frame = +1 Query: 43 NRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDGPEDNPQYTTVYVGN 222 N++++ NWAT S + + + SG++ +++VG+ Sbjct: 135 NKKLKLNWATSS-------YSNSNNSLNNVKSGNN------------------CSIFVGD 169 Query: 223 LSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQ 384 L+ ++ + + F + S ++ D KG+GFV+++ +E A+ G Sbjct: 170 LAPNVTESQLFELF-INRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGV 228 Query: 385 LIGGRQIK 408 + GR IK Sbjct: 229 FLNGRAIK 236
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 44.3 bits (103), Expect = 6e-04 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 ++VG LS D + + + F G I EV V +D+ GFGFV + ++A A+ Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYG--QISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65 Query: 370 TGNGQLIGGRQIKCSWGSK 426 NG+ + GRQI+ K Sbjct: 66 AMNGKSVDGRQIRVDQAGK 84
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 44.3 bits (103), Expect = 6e-04 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 ++VG LS D + + + F G I EV V +D+ GFGFV + ++A A+ Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYG--QISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65 Query: 370 TGNGQLIGGRQIKCSWGSK 426 NG+ + GRQI+ K Sbjct: 66 AMNGKSVDGRQIRVDQAGK 84
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 43.9 bits (102), Expect = 8e-04 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 ++VG L+ + D + H G I EV V +D+ GFGF+ ++ E A+ A++ Sbjct: 8 LFVGGLNFNTDEQALED--HFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65 Query: 370 TGNGQLIGGRQIKCSWGSK 426 NG+ + GRQI+ K Sbjct: 66 AMNGESLDGRQIRVDHAGK 84
>P70372:ELAV1_MOUSE ELAV-like protein 1 - Mus musculus (Mouse)| Length = 326 Score = 43.9 bits (102), Expect = 8e-04 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 +++ NL D D + + F GA + V+V RD KGFGFV + +EE+A AI Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGA--VTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIA 303 Query: 370 TGNGQLIGGRQIKCSW 417 + NG +G + ++ S+ Sbjct: 304 SLNGYRLGDKILQVSF 319
>Q23121:RSP1_CAEEL Probable splicing factor, arginine/serine-rich 1 - Caenorhabditis| elegans Length = 312 Score = 43.5 bits (101), Expect = 0.001 Identities = 21/66 (31%), Positives = 35/66 (53%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 +Y+G L+ + D+ FF G G I +V + GFGFV + +A A+ NG+ Sbjct: 5 IYIGRLTSRVSEKDIEHFFR--GYGQIRDVLLKN--GFGFVEFDDKRDAEDAVHDLNGKE 60 Query: 388 IGGRQI 405 +GG ++ Sbjct: 61 LGGERV 66
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 43.5 bits (101), Expect = 0.001 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 ++VG LS D + + + F G I EV V +D+ GFGFV + ++A A+ Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYG--QISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65 Query: 370 TGNGQLIGGRQIKCSWGSK 426 NG+ + GRQI+ K Sbjct: 66 AMNGKSVDGRQIRVDQAGK 84
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 43.5 bits (101), Expect = 0.001 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 ++VG LS D + + + F G I EV V +D+ GFGFV + ++A A+ Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYG--QISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65 Query: 370 TGNGQLIGGRQIKCSWGSK 426 NG+ + GRQI+ K Sbjct: 66 AMNGKSVDGRQIRVDQAGK 84
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 43.5 bits (101), Expect = 0.001 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 ++VG LS D + + + F G I EV V +D+ GFGFV + ++A A+ Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYG--QISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65 Query: 370 TGNGQLIGGRQIKCSWGSK 426 NG+ + GRQI+ K Sbjct: 66 AMNGKSVDGRQIRVDQAGK 84
>Q8WP23:BOLL_MACFA Protein boule-like - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 283 Score = 43.5 bits (101), Expect = 0.001 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%) Frame = +1 Query: 175 DGPEDNPQYTTV-----YVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFG 324 + P P+Y TV +VG + + +D+ +FF G S++EV++ D KG+G Sbjct: 19 NNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYG--SVKEVKIVNDRAGVSKGYG 76 Query: 325 FVRYSTHEEAAQAIQ 369 FV + T E+A + +Q Sbjct: 77 FVTFETQEDAQKILQ 91
>Q8N9W6:BOLL_HUMAN Protein boule-like - Homo sapiens (Human)| Length = 283 Score = 43.5 bits (101), Expect = 0.001 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%) Frame = +1 Query: 175 DGPEDNPQYTTV-----YVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFG 324 + P P+Y TV +VG + + +D+ +FF G S++EV++ D KG+G Sbjct: 19 NNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYG--SVKEVKIVNDRAGVSKGYG 76 Query: 325 FVRYSTHEEAAQAIQ 369 FV + T E+A + +Q Sbjct: 77 FVTFETQEDAQKILQ 91
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 43.1 bits (100), Expect = 0.001 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 ++VG L+ + D + H G I EV V +D+ GFGF+ ++ E A+ A++ Sbjct: 8 LFVGGLNFNTDEQALED--HFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMR 65 Query: 370 TGNGQLIGGRQIKCSWGSK 426 NG+ + GRQI+ K Sbjct: 66 AMNGESLDGRQIRVDHAGK 84
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 43.1 bits (100), Expect = 0.001 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFGFVRYSTHEEAAQAIQT 372 +++ NL ID +H F G +I +V D KG+GFV+Y+ E A +AI+ Sbjct: 126 IFIKNLDESIDHKALHDTFSSFG--NIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEK 183 Query: 373 GNGQLIGGRQI 405 NG L+ +Q+ Sbjct: 184 LNGMLLNDKQV 194 Score = 40.4 bits (93), Expect = 0.009 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 5/74 (6%) Frame = +1 Query: 175 DGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFGFVRYS 339 D + ++T VYV NL+ +D+ F G I V +D KGFGFV + Sbjct: 206 DSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYG--KITSAVVMKDGEGKSKGFGFVNFE 263 Query: 340 THEEAAQAIQTGNG 381 ++AA+A+++ NG Sbjct: 264 NADDAARAVESLNG 277 Score = 37.4 bits (85), Expect = 0.072 Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 6/81 (7%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQA 363 T++YVG+L ++ + + F +G ++ VRV RD G+G+V ++ ++AA+A Sbjct: 36 TSLYVGDLDFNVTDSQLFDAFGQMG--TVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARA 93 Query: 364 IQTGNGQLIGGRQIKCSWGSK 426 IQ N + G+ I+ + + Sbjct: 94 IQELNYIPLYGKPIRVMYSHR 114 Score = 37.4 bits (85), Expect = 0.072 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Frame = +1 Query: 187 DNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFGFVRYSTHEE 351 D Q + +YV NL I + F G ++ +V RD KG GFV ++T EE Sbjct: 313 DKFQSSNLYVKNLDPSISDEKLKEIFSPFG--TVTSSKVMRDPNGTSKGSGFVAFATPEE 370 Query: 352 AAQAIQTGNGQLIGGRQI 405 A +A+ +G++I + + Sbjct: 371 ATEAMSQLSGKMIESKPL 388
>Q5FVM4:NONO_RAT Non-POU domain-containing octamer-binding protein - Rattus| norvegicus (Rat) Length = 476 Score = 43.1 bits (100), Expect = 0.001 Identities = 25/83 (30%), Positives = 42/83 (50%) Frame = +1 Query: 160 ENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYS 339 +N + G + Q + ++VGNL DI ++ + F G EV + +DKGFGF+R Sbjct: 65 KNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG--EVFIHKDKGFGFIRLE 122 Query: 340 THEEAAQAIQTGNGQLIGGRQIK 408 T A A + + G+Q++ Sbjct: 123 TRTLAEIAKVELDNMPLRGKQLR 145
>Q5RFL9:NONO_PONPY Non-POU domain-containing octamer-binding protein - Pongo pygmaeus| (Orangutan) Length = 471 Score = 43.1 bits (100), Expect = 0.001 Identities = 25/83 (30%), Positives = 42/83 (50%) Frame = +1 Query: 160 ENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYS 339 +N + G + Q + ++VGNL DI ++ + F G EV + +DKGFGF+R Sbjct: 60 KNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG--EVFIHKDKGFGFIRLE 117 Query: 340 THEEAAQAIQTGNGQLIGGRQIK 408 T A A + + G+Q++ Sbjct: 118 TRTLAEIAKVELDNMPLRGKQLR 140
>Q99K48:NONO_MOUSE Non-POU domain-containing octamer-binding protein - Mus musculus| (Mouse) Length = 473 Score = 43.1 bits (100), Expect = 0.001 Identities = 25/83 (30%), Positives = 42/83 (50%) Frame = +1 Query: 160 ENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYS 339 +N + G + Q + ++VGNL DI ++ + F G EV + +DKGFGF+R Sbjct: 62 KNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG--EVFIHKDKGFGFIRLE 119 Query: 340 THEEAAQAIQTGNGQLIGGRQIK 408 T A A + + G+Q++ Sbjct: 120 TRTLAEIAKVELDNMPLRGKQLR 142
>Q15233:NONO_HUMAN Non-POU domain-containing octamer-binding protein - Homo sapiens| (Human) Length = 471 Score = 43.1 bits (100), Expect = 0.001 Identities = 25/83 (30%), Positives = 42/83 (50%) Frame = +1 Query: 160 ENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYS 339 +N + G + Q + ++VGNL DI ++ + F G EV + +DKGFGF+R Sbjct: 60 KNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG--EVFIHKDKGFGFIRLE 117 Query: 340 THEEAAQAIQTGNGQLIGGRQIK 408 T A A + + G+Q++ Sbjct: 118 TRTLAEIAKVELDNMPLRGKQLR 140
>P25299:RNA15_YEAST mRNA 3'-end-processing protein RNA15 - Saccharomyces cerevisiae| (Baker's yeast) Length = 296 Score = 42.4 bits (98), Expect = 0.002 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 4/86 (4%) Frame = +1 Query: 178 GPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGA----GSIEEVRVTRDKGFGFVRYSTH 345 G ++NP VY+G++ +D + +G + + + R KG+ F+ + Sbjct: 10 GVQNNPPSRVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDL 69 Query: 346 EEAAQAIQTGNGQLIGGRQIKCSWGS 423 E +A A++ NG +G R +KC + S Sbjct: 70 ESSASAVRNLNGYQLGSRFLKCGYSS 95 Score = 32.0 bits (71), Expect = 3.0 Identities = 15/60 (25%), Positives = 30/60 (50%) Frame = +1 Query: 7 TAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDGPE 186 +A+ LNG LG+R ++C +++ +G +Q + ++ G N N +GP+ Sbjct: 74 SAVRNLNGYQLGSRFLKCGYSSNSDISGVSQQQQQQYNNIN--GNNNNNGNNNNNSNGPD 131
>Q8T6B9:PUF68_DROME Poly U-binding-splicing factor half pint - Drosophila melanogaster| (Fruit fly) Length = 637 Score = 42.4 bits (98), Expect = 0.002 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 6/73 (8%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 VYVG++S ++ + + F G I+ + ++ D KGF FV Y E A A++ Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGP--IKSINMSWDPITQKHKGFAFVEYEIPEGAQLALE 189 Query: 370 TGNGQLIGGRQIK 408 NG L+GGR IK Sbjct: 190 QMNGALMGGRNIK 202 Score = 37.7 bits (86), Expect = 0.055 Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 4/140 (2%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ A+ ++NG +G R I+ + +N + +Q D + Sbjct: 184 AQLALEQMNGALMGGRNIKVG---RPSNMPQAQQVID---------------------EV 219 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLG----AGSIEEVRVTRDKGFGFVRYSTHE 348 E+ + +YV ++ D+ D+ F G + + KG+GF+ Y+ + Sbjct: 220 QEEAKSFNRIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQ 279 Query: 349 EAAQAIQTGNGQLIGGRQIK 408 +AI + N +GG+ ++ Sbjct: 280 AMDEAIASMNLFDLGGQLLR 299
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 42.4 bits (98), Expect = 0.002 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = +1 Query: 187 DNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---RDKGFGFVRYSTHEEAA 357 + Q +Y+ NL +D + F G + +V + +GFGFV YS EEA Sbjct: 327 EKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEAL 386 Query: 358 QAIQTGNGQLIGGRQI 405 +A+ NG++IG + + Sbjct: 387 RALSEMNGKMIGRKPL 402 Score = 36.6 bits (83), Expect = 0.12 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---RDKGFGFVRYSTHEEAAQAIQTGN 378 +++ NL ID+ + F G +V + R KG+GFV++ E A AI N Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197 Query: 379 GQLIGGRQI 405 G L+ +Q+ Sbjct: 198 GMLMNDKQV 206
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 42.0 bits (97), Expect = 0.003 Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 6/108 (5%) Frame = +1 Query: 121 MVELISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVR 300 M++L + K +A+E + ++VGNL ++D ++ F G ++ + Sbjct: 76 MIKLYGKPIKVNKASAHEKNMDVG---ANIFVGNLDPEVDEKLLYDTFSAFGV-ILQVPK 131 Query: 301 VTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 426 + RD KGF F+ +++ E + A++ NGQ + R I S+ K Sbjct: 132 IMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFK 179 Score = 35.0 bits (79), Expect = 0.36 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Frame = +1 Query: 196 QYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAA 357 Q T+YVG L + + + ++ AG + V + +D+ GFGFV + E+A Sbjct: 11 QDATIYVGGLDEKVSESILWEL--MVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68 Query: 358 QAIQTGNGQLIGGRQIKCSWGS 423 AI+ N + G+ IK + S Sbjct: 69 YAIKILNMIKLYGKPIKVNKAS 90
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 42.0 bits (97), Expect = 0.003 Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 5/73 (6%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFGFVRYSTHEEAAQAI 366 + +YV N++ + ++ + H G+I ++ D KGFGFV +ST EEA A+ Sbjct: 304 SNIYVKNVNVAVTEEELRK--HFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAV 361 Query: 367 QTGNGQLIGGRQI 405 +T +GQ+ G+ + Sbjct: 362 KTFHGQMFHGKPL 374 Score = 32.3 bits (72), Expect = 2.3 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Frame = +1 Query: 208 VYVGNLSHDIDS---NDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGN 378 V+V NL + + D+ + F + + + + + +G+GFV++ + A AIQT N Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLN 173 Query: 379 GQLIGGRQI 405 ++ ++I Sbjct: 174 STIVADKEI 182
>Q3SZM1:MK67I_BOVIN MKI67 FHA domain-interacting nucleolar phosphoprotein - Bos taurus| (Bovine) Length = 296 Score = 42.0 bits (97), Expect = 0.003 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------G 318 + A + + P +YVG+L + + +F G ++ R++R K G Sbjct: 30 RRRATKQQEKQKPTPGVIYVGHLPPTLYETQIRAYFSQFG--TVTRFRLSRSKKTGNSKG 87 Query: 319 FGFVRYSTHEEAAQAIQTGNGQLIGGRQIKC 411 +GFV + + + A A +T N L G R +KC Sbjct: 88 YGFVEFESEDVAKIAAETMNNYLFGERLLKC 118
>Q10422:YDC1_SCHPO Uncharacterized RNA-binding protein C25G10.01 - Schizosaccharomyces| pombe (Fission yeast) Length = 297 Score = 41.6 bits (96), Expect = 0.004 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 6/112 (5%) Frame = +1 Query: 82 NAGEVKQSTDSKGMVELISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRF 261 N EV + +S + + S+ G EN D ++V ++ + +++ + Sbjct: 71 NEDEVDPNNESTALDKKEPQSAPEGSENLGND----------LFVSGIASRMQEDELQQI 120 Query: 262 FHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGR 399 F G ++ VR+ R+ +GFGF+ +ST EEA AI N Q GR Sbjct: 121 FSKFG--TVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNLNSQEFYGR 170
>Q13247:SFRS6_HUMAN Splicing factor, arginine/serine-rich 6 - Homo sapiens (Human)| Length = 344 Score = 41.6 bits (96), Expect = 0.004 Identities = 22/66 (33%), Positives = 37/66 (56%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 VY+G LS+++ D+ RFF G G + EV + G+GFV + +A A+ NG+ Sbjct: 4 VYIGRLSYNVREKDIQRFFS--GYGRLLEVDL--KNGYGFVEFEDSRDADDAVYELNGKE 59 Query: 388 IGGRQI 405 + G ++ Sbjct: 60 LCGERV 65
>Q9CWZ3:RBM8A_MOUSE RNA-binding protein 8A - Mus musculus (Mouse)| Length = 174 Score = 41.6 bits (96), Expect = 0.004 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 6/93 (6%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KG 318 +++ +E GP+ + + ++V + + D+H F G I+ + + D KG Sbjct: 58 EQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF--AEYGEIKNIHLNLDRRTGYLKG 115 Query: 319 FGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 + V Y T++EA A++ NGQ + G+ I W Sbjct: 116 YTLVEYETYKEAQAAMEGLNGQDLMGQPISVDW 148
>Q9Y5S9:RBM8A_HUMAN RNA-binding protein 8A - Homo sapiens (Human)| Length = 174 Score = 41.6 bits (96), Expect = 0.004 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 6/93 (6%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KG 318 +++ +E GP+ + + ++V + + D+H F G I+ + + D KG Sbjct: 58 EQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF--AEYGEIKNIHLNLDRRTGYLKG 115 Query: 319 FGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 + V Y T++EA A++ NGQ + G+ I W Sbjct: 116 YTLVEYETYKEAQAAMEGLNGQDLMGQPISVDW 148
>Q3ZCE8:RBM8A_BOVIN RNA-binding protein 8A - Bos taurus (Bovine)| Length = 173 Score = 41.6 bits (96), Expect = 0.004 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 6/93 (6%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KG 318 +++ +E GP+ + + ++V + + D+H F G I+ + + D KG Sbjct: 57 EQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF--AEYGEIKNIHLNLDRRTGYLKG 114 Query: 319 FGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 + V Y T++EA A++ NGQ + G+ I W Sbjct: 115 YTLVEYETYKEAQAAMEGLNGQDLMGQPISVDW 147
>Q04047:NONA_DROME Protein no-on-transient A - Drosophila melanogaster (Fruit fly)| Length = 700 Score = 41.6 bits (96), Expect = 0.004 Identities = 22/67 (32%), Positives = 37/67 (55%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 +YVGNL++DI +++ F G I E+ DK F F++ H A +A + +G + Sbjct: 304 LYVGNLTNDITDDELREMFK--PYGEISEIFSNLDKNFTFLKVDYHPNAEKAKRALDGSM 361 Query: 388 IGGRQIK 408 GRQ++ Sbjct: 362 RKGRQLR 368
>P52299:NCBP2_XENLA Nuclear cap-binding protein subunit 2 - Xenopus laevis (African| clawed frog) Length = 148 Score = 41.2 bits (95), Expect = 0.005 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Frame = +1 Query: 196 QYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAA 357 Q T+YVGNLS +H F +G ++ + + DK GF FV Y T +A Sbjct: 30 QSCTLYVGNLSFYTTEEQIHELFS--KSGDVKRIVMGLDKVKKTACGFCFVEYYTRADAG 87 Query: 358 QAIQTGNGQLIGGRQIKCSW 417 A++ NG + R ++ W Sbjct: 88 TAMRFINGTRLDDRIVRTDW 107
>P23241:ELAV_DROVI Protein elav - Drosophila virilis (Fruit fly)| Length = 519 Score = 41.2 bits (95), Expect = 0.005 Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 +++ NL+ + + + + F GA ++ V++ +D KG+GFV + ++EAA AI+ Sbjct: 440 IFIYNLAPETEEAALWQLFGPFGA--VQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIR 497 Query: 370 TGNGQLIGGRQIKCSW 417 NG +G R ++ S+ Sbjct: 498 ALNGYTMGNRVLQVSF 513 Score = 36.2 bits (82), Expect = 0.16 Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 19/128 (14%) Frame = +1 Query: 91 EVKQSTDSKGMVELISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHL 270 +V Q + + + + + G +N + E T + V L + +++ F Sbjct: 151 QVVQQQVQQQVQQANTNGNSGGAQNGSNGSTETR---TNLIVNYLPQTMTEDEIRSLFS- 206 Query: 271 LGAGSIEEVRVTRDK-------------------GFGFVRYSTHEEAAQAIQTGNGQLIG 393 G IE V++ RDK G+GFV Y ++A QA+ NG + Sbjct: 207 -SVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQ 265 Query: 394 GRQIKCSW 417 + IK S+ Sbjct: 266 NKTIKVSF 273 Score = 33.1 bits (74), Expect = 1.4 Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 5/132 (3%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A+ A+N LNG L N+ I+ ++A ++A I G++ Sbjct: 252 AEQAVNVLNGLRLQNKTIKVSFARPSSDA---------------IKGAN----------- 285 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEV-----RVTRDKGFGFVRYSTH 345 +YV L + ++ F GA + T+ KG GF+R+ Sbjct: 286 ---------LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKR 336 Query: 346 EEAAQAIQTGNG 381 EEA +AI NG Sbjct: 337 EEATRAIIALNG 348
>P16914:ELAV_DROME Protein elav - Drosophila melanogaster (Fruit fly)| Length = 483 Score = 41.2 bits (95), Expect = 0.005 Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 +++ NL+ + + + + F GA ++ V++ +D KG+GFV + ++EAA AI+ Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGA--VQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIR 461 Query: 370 TGNGQLIGGRQIKCSW 417 NG +G R ++ S+ Sbjct: 462 ALNGYTMGNRVLQVSF 477 Score = 38.5 bits (88), Expect = 0.032 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 19/113 (16%) Frame = +1 Query: 136 SGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK 315 +G++ +G +N + E T + V L + +++ F G IE V++ RDK Sbjct: 130 NGNAGSGSQNGSNGSTETR---TNLIVNYLPQTMTEDEIRSLFS--SVGEIESVKLIRDK 184 Query: 316 -------------------GFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 G+GFV Y ++A QA+ NG + + IK S+ Sbjct: 185 SQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSF 237 Score = 33.1 bits (74), Expect = 1.4 Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 5/132 (3%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A+ A+N LNG L N+ I+ ++A ++A I G++ Sbjct: 216 AEQAVNVLNGLRLQNKTIKVSFARPSSDA---------------IKGAN----------- 249 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEV-----RVTRDKGFGFVRYSTH 345 +YV L + ++ F GA + T+ KG GF+R+ Sbjct: 250 ---------LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKR 300 Query: 346 EEAAQAIQTGNG 381 EEA +AI NG Sbjct: 301 EEATRAIIALNG 312
>Q5M9F1:RBM34_RAT RNA-binding protein 34 - Rattus norvegicus (Rat)| Length = 428 Score = 40.8 bits (94), Expect = 0.007 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 6/69 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 +V+VGNL + +D + + H L GSI VR+ R+ +GFG+V + + A+ Sbjct: 286 SVFVGNLPYRVDESALEE--HFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL 343 Query: 367 QTGNGQLIG 393 + N +L+G Sbjct: 344 KLNNSELMG 352
>O14102:SAP49_SCHPO Spliceosome-associated protein 49 - Schizosaccharomyces pombe| (Fission yeast) Length = 335 Score = 40.4 bits (93), Expect = 0.009 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFGFVRYSTHEEAAQAIQT 372 ++VGNL +D ++ F LG ++ +V RD KG+GFV Y + E A AI+ Sbjct: 101 LFVGNLDPLVDERVLYDTFSALGQ-LVKAPQVARDENGRSKGYGFVSYDSFETADAAIEA 159 Query: 373 GNGQLIGGRQIKCSWGSK 426 N Q + + I S+ K Sbjct: 160 MNNQFLMNKPITVSYAFK 177 Score = 37.0 bits (84), Expect = 0.094 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 6/87 (6%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTH 345 ED Q T+Y+GNL + D F L AG + + + RD+ GFGF + Sbjct: 5 EDRNQDATIYLGNLDEKV--TDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHE 62 Query: 346 EEAAQAIQTGNGQLIGGRQIKCSWGSK 426 ++ A Q N + G+ I+ + S+ Sbjct: 63 QDVEYACQILNQVKLFGKPIRVNRASQ 89
>Q57014:RBPA_SYNY3 Putative RNA-binding protein rbpA - Synechocystis sp. (strain PCC| 6803) Length = 101 Score = 40.4 bits (93), Expect = 0.009 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 ++YVGNLS+D+ D+ F GS++ V++ D +GFGFV E AI Sbjct: 2 SIYVGNLSYDVSEADLTAVF--AEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAI 59 Query: 367 QTGNGQLIGGRQIK 408 + +G GR +K Sbjct: 60 EALDGAEWMGRDLK 73
>Q499V6:ZCRB1_RAT Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Rattus norvegicus (Rat) Length = 217 Score = 40.0 bits (92), Expect = 0.011 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Frame = +1 Query: 193 PQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEA 354 P +TVYV NL + +ND++R F G + +V + +D KG F+ + + A Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKY--GKVVKVTIMKDKDTRKSKGVAFILFLDKDSA 64 Query: 355 AQAIQTGNGQLIGGRQIKCS 414 + N + + GR IK S Sbjct: 65 LNCTRAINNKQLFGRVIKAS 84
>Q9CZ96:ZCRB1_MOUSE Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Mus musculus (Mouse) Length = 217 Score = 40.0 bits (92), Expect = 0.011 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Frame = +1 Query: 193 PQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEA 354 P +TVYV NL + +ND++R F G + +V + +D KG F+ + + A Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKY--GKVVKVTIMKDKDTRKSKGVAFILFLDKDSA 64 Query: 355 AQAIQTGNGQLIGGRQIKCS 414 + N + + GR IK S Sbjct: 65 LNCTRAINNKQLFGRVIKAS 84
>Q8TBF4:ZCRB1_HUMAN Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Homo sapiens (Human) Length = 217 Score = 40.0 bits (92), Expect = 0.011 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Frame = +1 Query: 193 PQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEA 354 P +TVYV NL + +ND++R F G + +V + +D KG F+ + + A Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKY--GKVVKVTIMKDKDTRKSKGVAFILFLDKDSA 64 Query: 355 AQAIQTGNGQLIGGRQIKCS 414 + N + + GR IK S Sbjct: 65 QNCTRAINNKQLFGRVIKAS 84
>Q56JZ7:ZCRB1_BOVIN Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Bos taurus (Bovine) Length = 217 Score = 40.0 bits (92), Expect = 0.011 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Frame = +1 Query: 193 PQYTTVYVGNLSHDIDSNDVHRFFHLLG----AGSIEEVRVTRDKGFGFVRYSTHEEAAQ 360 P +TVYV NL + +ND++R F G +++ R KG F+ + + A Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQN 66 Query: 361 AIQTGNGQLIGGRQIKCS 414 + N + + GR IK S Sbjct: 67 CTRAINNKQLFGRVIKAS 84
>Q5R7X2:SR140_PONPY U2-associated protein SR140 - Pongo pygmaeus (Orangutan)| Length = 1028 Score = 40.0 bits (92), Expect = 0.011 Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 14/131 (10%) Frame = +1 Query: 70 TKGANAGEVKQSTDSKGMVELISGSSEAGKENANED---GPED--NPQYTTVYVGNLSHD 234 TKG + +DS G + S + + +D G D +P T +Y+GN++ Sbjct: 224 TKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSVLDDYAPGSHDVGDPSTTNLYLGNINPQ 283 Query: 235 IDSNDVHRFFHLLGAGSIEEVRV---------TRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 ++ + + F G + V++ R++ GFV + +A +A++ NG++ Sbjct: 284 MNEEMLCQEFGRFGP--LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKM 341 Query: 388 IGGRQIKCSWG 420 I ++K WG Sbjct: 342 IMSFEMKLGWG 352
>Q8VE97:SFRS4_MOUSE Splicing factor, arginine/serine-rich 4 - Mus musculus (Mouse)| Length = 489 Score = 40.0 bits (92), Expect = 0.011 Identities = 24/66 (36%), Positives = 35/66 (53%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 VY+G LS+ DV RFF G G I EV + G+GFV + +A A+ NG+ Sbjct: 4 VYIGRLSYQARERDVERFFK--GYGKILEVDL--KNGYGFVEFDDLRDADDAVYELNGKD 59 Query: 388 IGGRQI 405 + G ++ Sbjct: 60 LCGERV 65
>Q08170:SFRS4_HUMAN Splicing factor, arginine/serine-rich 4 - Homo sapiens (Human)| Length = 494 Score = 40.0 bits (92), Expect = 0.011 Identities = 24/66 (36%), Positives = 35/66 (53%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 VY+G LS+ DV RFF G G I EV + G+GFV + +A A+ NG+ Sbjct: 4 VYIGRLSYQARERDVERFFK--GYGKILEVDL--KNGYGFVEFDDLRDADDAVYELNGKD 59 Query: 388 IGGRQI 405 + G ++ Sbjct: 60 LCGERV 65
>Q44554:RBPB_ANASP Putative RNA-binding protein rbpB - Anabaena sp. (strain PCC 7120)| Length = 103 Score = 40.0 bits (92), Expect = 0.011 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD----KGFGFVRYSTHEEAAQAIQT 372 ++YVGNLS+D+ ++ F G+ ++ V R+ +GFGFV + E AI+ Sbjct: 2 SIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEA 61 Query: 373 GNGQLIGGRQIK 408 +G GR +K Sbjct: 62 LDGAEWMGRDLK 73
>Q8C5L7:RBM34_MOUSE RNA-binding protein 34 - Mus musculus (Mouse)| Length = 375 Score = 40.0 bits (92), Expect = 0.011 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 6/69 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 +V+VGNL + I+ + + H L GSI VR+ R+ +GFG+V + + A+ Sbjct: 292 SVFVGNLPYKIEDSALEE--HFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL 349 Query: 367 QTGNGQLIG 393 + N +L+G Sbjct: 350 KLNNSELMG 358
>Q6DGV1:CELF4_DANRE CUG-BP- and ETR-3-like factor 4 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 520 Score = 40.0 bits (92), Expect = 0.011 Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-----DKGFGFVRYSTHEEAAQAIQT 372 ++VG L+ +DV R F G SIEE + R KG FV+YSTH EA AI Sbjct: 137 LFVGMLNKQQCEDDVRRLFESFG--SIEECTILRGPDGNSKGCAFVKYSTHAEAQAAISA 194 Query: 373 GNG 381 +G Sbjct: 195 LHG 197 Score = 31.2 bits (69), Expect = 5.2 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Frame = +1 Query: 187 DNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR----DKGFGFVRYSTHEEA 354 + P+ +++ +L + ++ + F G +V V R K FGFV + A Sbjct: 430 EGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSA 489 Query: 355 AQAIQTGNGQLIGGRQIK 408 AIQ+ NG IG +++K Sbjct: 490 QAAIQSMNGFQIGMKRLK 507
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 39.7 bits (91), Expect = 0.015 Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 3/138 (2%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ A++ELN K +++ A K E EL + E N+ Sbjct: 314 AQKAVDELNDKEYKGKKLYVGRAQKKHEREE-----------ELRKRYEQMKLEKMNKY- 361 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT---RDKGFGFVRYSTHEE 351 Q +++ NL ++D + F G + ++ + KGFGFV Y+T EE Sbjct: 362 -----QGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEE 416 Query: 352 AAQAIQTGNGQLIGGRQI 405 A +A+ N +++ G+ + Sbjct: 417 ANKAVTEMNQRMLAGKPL 434 Score = 38.9 bits (89), Expect = 0.025 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Frame = +1 Query: 199 YTTVYVGNLSHDIDSNDVHRFFHLLGA-GSIEEVRVTRDK--GFGFVRYSTHEEAAQAIQ 369 +T VY+ NL +I + F G S+ V+ DK GFGFV Y+ HE A +A+ Sbjct: 260 FTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVD 319 Query: 370 TGNGQLIGGRQI 405 N + G+++ Sbjct: 320 ELNDKEYKGKKL 331 Score = 36.6 bits (83), Expect = 0.12 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFGFVRYSTHEEAAQAIQT 372 V++ NL ID+ +H F G I +V D KG+GFV + + E A AI+ Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFG--KILSCKVAVDELGNAKGYGFVHFDSVESANAAIEH 227 Query: 373 GNGQLIGGRQI 405 NG L+ +++ Sbjct: 228 VNGMLLNDKKV 238
>Q3B7L6:SFRS6_BOVIN Splicing factor, arginine/serine-rich 6 - Bos taurus (Bovine)| Length = 345 Score = 39.3 bits (90), Expect = 0.019 Identities = 20/66 (30%), Positives = 36/66 (54%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 VY+G LS+++ D+ RFF G G + + + G+GFV + +A A+ NG+ Sbjct: 4 VYIGRLSYNVREKDIQRFFS--GYGRL--LGIDLKNGYGFVEFEDSRDADDAVYELNGKE 59 Query: 388 IGGRQI 405 + G ++ Sbjct: 60 LCGERV 65
>Q5XG24:RNPS1_XENLA RNA-binding protein with serine-rich domain 1 - Xenopus laevis| (African clawed frog) Length = 283 Score = 39.3 bits (90), Expect = 0.019 Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 5/98 (5%) Frame = +1 Query: 136 SGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-- 309 S S + ++ +P+ T V++G L+ ++ + + F G + ++ V R Sbjct: 116 SKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYH 175 Query: 310 ---DKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCS 414 KG+ +V + EEA +A++ +G I G++I S Sbjct: 176 PHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITAS 213
>Q6PHZ5:RB15B_MOUSE Putative RNA-binding protein 15B - Mus musculus (Mouse)| Length = 564 Score = 39.3 bits (90), Expect = 0.019 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Frame = +1 Query: 181 PEDNPQYT-TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEV---RVTRDKG--FGFVRYST 342 PED+ + T +++GNL H + ++ R F G IEEV R R +G + F+++ Sbjct: 2 PEDDQRATRNLFIGNLDHSVSEVELRRAFEKYGI--IEEVVIKRPARGQGGAYAFLKFQN 59 Query: 343 HEEAAQAIQTGNGQLIGGRQIKCSWG 420 + A +A +G++IG IK +G Sbjct: 60 LDMAHRAKVAMSGRVIGRNPIKIGYG 85
>Q8NDT2:RB15B_HUMAN Putative RNA-binding protein 15B - Homo sapiens (Human)| Length = 563 Score = 39.3 bits (90), Expect = 0.019 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Frame = +1 Query: 181 PEDNPQYT-TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEV---RVTRDKG--FGFVRYST 342 PED+ + T +++GNL H + ++ R F G IEEV R R +G + F+++ Sbjct: 2 PEDDQRATRNLFIGNLDHSVSEVELRRAFEKYGI--IEEVVIKRPARGQGGAYAFLKFQN 59 Query: 343 HEEAAQAIQTGNGQLIGGRQIKCSWG 420 + A +A +G++IG IK +G Sbjct: 60 LDMAHRAKVAMSGRVIGRNPIKIGYG 85
>P53883:NOP13_YEAST Nucleolar protein 13 - Saccharomyces cerevisiae (Baker's yeast)| Length = 403 Score = 39.3 bits (90), Expect = 0.019 Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 19/127 (14%) Frame = +1 Query: 97 KQSTDSKGMVEL----ISGSSEAGKENANEDGPED---------NPQYTTVYVGNLSHDI 237 K K ++EL ++G + K++ N G D NP ++VGNLS D+ Sbjct: 191 KNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPPSRILFVGNLSFDV 250 Query: 238 DSNDVHRFFHLLGAGSIEEVRVT------RDKGFGFVRYSTHEEAAQAIQTGNGQLIGGR 399 + + + H G I ++R+ + KGF F+ + E + ++ + + I GR Sbjct: 251 TDDLLRK--HFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNELKDKSCRKIAGR 308 Query: 400 QIKCSWG 420 ++ +G Sbjct: 309 PLRMEYG 315
>Q5KJL5:MRD1_CRYNE Multiple RNA-binding domain-containing protein 1 - Cryptococcus| neoformans (Filobasidiella neoformans) Length = 769 Score = 39.3 bits (90), Expect = 0.019 Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 11/153 (7%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A A+ L G + + + +A +GA KG G +E GK + Sbjct: 594 ATKALKALEGFEIDGKSLEVKFAQRGAE----DDRETKKG------GDAEGGKTKS---- 639 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----------KGFGF 327 T V V NL + DV F G ++ +R+ R +GF F Sbjct: 640 -------TKVLVKNLPFEATKKDVRELFSAYG--QLKSLRLPRKAVPTSTGAQSTRGFAF 690 Query: 328 VRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 426 + ++TH EAA+A++ + GR + W ++ Sbjct: 691 LEFTTHTEAARAMEALKHTHLLGRHLVLQWANE 723
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 39.3 bits (90), Expect = 0.019 Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 4/77 (5%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGS----IEEVRVTRDKGFGFVRYSTHEEAAQAIQTG 375 +++G L+ + + + + + F G S +++ R +GFGFV + ++A A+ Sbjct: 7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66 Query: 376 NGQLIGGRQIKCSWGSK 426 NG+ + GRQI+ K Sbjct: 67 NGKSVDGRQIRVDQAGK 83
>Q42404:RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa - Arabidopsis thaliana| (Mouse-ear cress) Length = 427 Score = 38.9 bits (89), Expect = 0.025 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 15/101 (14%) Frame = +1 Query: 148 EAGKENANED----GPEDNPQ-----YTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVR 300 E G E A ED P ++P Y T++V L+++ + + R F G I+ V Sbjct: 111 EKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFE--SYGPIKRVH 168 Query: 301 VTRD------KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 405 + D KG+ F+ Y + A + +GQ I GR++ Sbjct: 169 LVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRV 209
>Q05196:PABP5_ARATH Polyadenylate-binding protein 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 668 Score = 38.9 bits (89), Expect = 0.025 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVR---VTRDKGFGFVRYSTHEEAAQAIQTGN 378 V++ NL ID+ ++ F G +V V R KG+GFV++ E A AI N Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 193 Query: 379 GQLIGGRQI 405 G L+ +Q+ Sbjct: 194 GMLLNDKQV 202 Score = 37.7 bits (86), Expect = 0.055 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Frame = +1 Query: 196 QYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD---KGFGFVRYSTHEEAAQAI 366 Q + +Y+ NL ++ + F G + +V + +GFGFV YS EEA A+ Sbjct: 326 QGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAM 385 Query: 367 QTGNGQLIGGRQI 405 + NG++IG + + Sbjct: 386 KEMNGKMIGRKPL 398
>Q5NVC8:CELF4_PONPY CUG-BP- and ETR-3-like factor 4 - Pongo pygmaeus (Orangutan)| Length = 486 Score = 38.9 bits (89), Expect = 0.025 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-----DKGFGFVRYSTHEEAAQAIQT 372 ++VG L+ +DV R F G +IEE + R KG FV+YS+H EA AI Sbjct: 154 LFVGMLNKQQSEDDVRRLFEAFG--NIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINA 211 Query: 373 GNG 381 +G Sbjct: 212 LHG 214
>Q7TSY6:CELF4_MOUSE CUG-BP- and ETR-3-like factor 4 - Mus musculus (Mouse)| Length = 486 Score = 38.9 bits (89), Expect = 0.025 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-----DKGFGFVRYSTHEEAAQAIQT 372 ++VG L+ +DV R F G +IEE + R KG FV+YS+H EA AI Sbjct: 154 LFVGMLNKQQSEDDVRRLFEAFG--NIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINA 211 Query: 373 GNG 381 +G Sbjct: 212 LHG 214
>Q4R535:CELF4_MACFA CUG-BP- and ETR-3-like factor 4 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 474 Score = 38.9 bits (89), Expect = 0.025 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-----DKGFGFVRYSTHEEAAQAIQT 372 ++VG L+ +DV R F G +IEE + R KG FV+YS+H EA AI Sbjct: 143 LFVGMLNKQQSEDDVRRLFEAFG--NIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINA 200 Query: 373 GNG 381 +G Sbjct: 201 LHG 203
>Q9BZC1:CELF4_HUMAN CUG-BP- and ETR-3-like factor 4 - Homo sapiens (Human)| Length = 486 Score = 38.9 bits (89), Expect = 0.025 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-----DKGFGFVRYSTHEEAAQAIQT 372 ++VG L+ +DV R F G +IEE + R KG FV+YS+H EA AI Sbjct: 154 LFVGMLNKQQSEDDVRRLFEAFG--NIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINA 211 Query: 373 GNG 381 +G Sbjct: 212 LHG 214
>P26686:SRR55_DROME Serine-arginine protein 55 - Drosophila melanogaster (Fruit fly)| Length = 376 Score = 38.5 bits (88), Expect = 0.032 Identities = 20/66 (30%), Positives = 35/66 (53%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 VYVG L + + D+ RFF G G ++ + G+GFV + + +A A+ NG+ Sbjct: 6 VYVGGLPYGVRERDLERFFK--GYGRTRDILIKN--GYGFVEFEDYRDADDAVYELNGKE 61 Query: 388 IGGRQI 405 + G ++ Sbjct: 62 LLGERV 67
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 38.5 bits (88), Expect = 0.032 Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 +++GNL +ID ++ F G ++ ++ RD KG+ F+ +++ + + AI+ Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIE 160 Query: 370 TGNGQLIGGRQIKCSWGSK 426 NGQ + R I S+ K Sbjct: 161 AMNGQYLCNRPITVSYAFK 179
>O14369:SCE3_SCHPO Probable RNA-binding protein sce3 - Schizosaccharomyces pombe| (Fission yeast) Length = 388 Score = 38.5 bits (88), Expect = 0.032 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEV---RVTRDKGFGFVRYSTHEEAAQAIQTG 375 T +VGNLS D+ ND+ FF G SI V R +GFG+V + T + + A+ Sbjct: 95 TAHVGNLSFDLTENDLGDFFG-EGVTSIRLVIDPLTERSRGFGYVEFETADTLSAALALS 153 Query: 376 NGQLIG 393 L+G Sbjct: 154 GEDLMG 159
>Q44560:RBPA_ANASP Putative RNA-binding protein rbpA - Anabaena sp. (strain PCC 7120)| Length = 102 Score = 38.5 bits (88), Expect = 0.032 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAI 366 ++YVGNLS+++ + + F G+++ V++ D+ GFGFV + E A AI Sbjct: 2 SIYVGNLSYEVTQDTLSAVF--AEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAI 59 Query: 367 QTGNGQLIGGRQIK 408 + +G GR +K Sbjct: 60 EALDGAEWMGRDLK 73
>Q5RF26:NUCL_PONPY Nucleolin - Pongo pygmaeus (Orangutan)| Length = 712 Score = 38.5 bits (88), Expect = 0.032 Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 2/138 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A+ + +GK G I E KQ T+ G + + E G+ G Sbjct: 419 AEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDYRGG 478 Query: 181 PED--NPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEA 354 + + T+ + NLS+ + F + + + + KG+ F+ +++ E+A Sbjct: 479 KNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDA 538 Query: 355 AQAIQTGNGQLIGGRQIK 408 +A+ + N + I GR I+ Sbjct: 539 KEALNSCNKREIEGRAIR 556 Score = 32.7 bits (73), Expect = 1.8 Identities = 34/131 (25%), Positives = 48/131 (36%), Gaps = 25/131 (19%) Frame = +1 Query: 100 QSTDSKGMVELISGSSEAGKENANE---------------DGPEDNPQYT-----TVYVG 219 Q+ SKG + S E KE N GP +P T++V Sbjct: 520 QNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVK 579 Query: 220 NLSHDIDSNDVHRFFHLLGAGSIEEVRVT-----RDKGFGFVRYSTHEEAAQAIQTGNGQ 384 LS D + F GS+ VT KGFGFV +++ E+A A + Sbjct: 580 GLSEDTTEETLKESFD----GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDG 635 Query: 385 LIGGRQIKCSW 417 I G ++ W Sbjct: 636 EIDGNKVTLDW 646
>Q4R4J7:NUCL_MACFA Nucleolin - Macaca fascicularis (Crab eating macaque) (Cynomolgus| monkey) Length = 711 Score = 38.5 bits (88), Expect = 0.032 Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 2/138 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A+ + +GK G I E KQ T+ G + + E G+ G Sbjct: 418 AEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDYRGG 477 Query: 181 PED--NPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEA 354 + + T+ + NLS+ + F + + + + KG+ F+ +++ E+A Sbjct: 478 KNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDA 537 Query: 355 AQAIQTGNGQLIGGRQIK 408 +A+ + N + I GR I+ Sbjct: 538 KEALNSCNKREIEGRAIR 555 Score = 32.7 bits (73), Expect = 1.8 Identities = 34/131 (25%), Positives = 48/131 (36%), Gaps = 25/131 (19%) Frame = +1 Query: 100 QSTDSKGMVELISGSSEAGKENANE---------------DGPEDNPQYT-----TVYVG 219 Q+ SKG + S E KE N GP +P T++V Sbjct: 519 QNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVK 578 Query: 220 NLSHDIDSNDVHRFFHLLGAGSIEEVRVT-----RDKGFGFVRYSTHEEAAQAIQTGNGQ 384 LS D + F GS+ VT KGFGFV +++ E+A A + Sbjct: 579 GLSEDTTEETLKESFD----GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDG 634 Query: 385 LIGGRQIKCSW 417 I G ++ W Sbjct: 635 EIDGNKVTLDW 645
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 38.5 bits (88), Expect = 0.032 Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 2/138 (1%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A+ + +GK G I E KQ T+ G + + E G+ G Sbjct: 417 AEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDYRGG 476 Query: 181 PED--NPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEA 354 + + T+ + NLS+ + F + + + + KG+ F+ +++ E+A Sbjct: 477 KNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDA 536 Query: 355 AQAIQTGNGQLIGGRQIK 408 +A+ + N + I GR I+ Sbjct: 537 KEALNSCNKREIEGRAIR 554 Score = 32.7 bits (73), Expect = 1.8 Identities = 34/131 (25%), Positives = 48/131 (36%), Gaps = 25/131 (19%) Frame = +1 Query: 100 QSTDSKGMVELISGSSEAGKENANE---------------DGPEDNPQYT-----TVYVG 219 Q+ SKG + S E KE N GP +P T++V Sbjct: 518 QNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVK 577 Query: 220 NLSHDIDSNDVHRFFHLLGAGSIEEVRVT-----RDKGFGFVRYSTHEEAAQAIQTGNGQ 384 LS D + F GS+ VT KGFGFV +++ E+A A + Sbjct: 578 GLSEDTTEETLKESFD----GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDG 633 Query: 385 LIGGRQIKCSW 417 I G ++ W Sbjct: 634 EIDGNKVTLDW 644
>Q9V535:RBM8A_DROME RNA-binding protein 8A - Drosophila melanogaster (Fruit fly)| Length = 165 Score = 38.1 bits (87), Expect = 0.042 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 6/88 (6%) Frame = +1 Query: 172 EDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVR 333 E GP+ + + ++V ++ + +++ F G I+ + + D KG+ V Sbjct: 63 EPGPQRSVEGWILFVTSIHEEAQEDEIQEKF--CDYGEIKNIHLNLDRRTGFSKGYALVE 120 Query: 334 YSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 Y TH++A A + NG I G+ I+ W Sbjct: 121 YETHKQALAAKEALNGAEIMGQTIQVDW 148
>Q9NW13:RBM28_HUMAN RNA-binding protein 28 - Homo sapiens (Human)| Length = 759 Score = 38.1 bits (87), Expect = 0.042 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 14/111 (12%) Frame = +1 Query: 127 ELISGSSEAGKENANEDGPEDNPQYTTVYVG---------NLSHDIDSNDVHRFFHLLGA 279 +L + + E GK N N + P+ P+ V NLS +D+ F GA Sbjct: 81 KLRNKTKEKGK-NENSECPKKEPKAKKAKVADKKARLIIRNLSFKCSEDDLKTVFAQFGA 139 Query: 280 GSIEEVRVTRD-----KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 + EV + R +GFGFV++ EA +A++ N + I GR + W Sbjct: 140 --VLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDW 188 Score = 30.4 bits (67), Expect = 8.8 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 12/88 (13%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT------RDKGFGFVRYST 342 P D + TV++ NLS D + ++ L G ++ VR+ KG F ++ T Sbjct: 328 PSDVNEGKTVFIRNLSFDSEEEELGEL--LQQFGELKYVRIVLHPDTEHSKGCAFAQFMT 385 Query: 343 HEEAAQAI------QTGNGQLIGGRQIK 408 E A + + G + GRQ+K Sbjct: 386 QEAAQKCLLAASPENEAGGLKLDGRQLK 413
>Q9GRX4:NONA_DROLR Protein no-on-transient A - Drosophila littoralis (Fruit fly)| Length = 698 Score = 38.1 bits (87), Expect = 0.042 Identities = 21/67 (31%), Positives = 36/67 (53%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 +YVGNL++DI ++ F G I E+ +K F F++ H A +A + +G + Sbjct: 283 LYVGNLTNDITDEELREMFK--PYGEIGEIFSNLEKNFTFLKVDYHINAEKAKRALDGSM 340 Query: 388 IGGRQIK 408 GRQ++ Sbjct: 341 RKGRQLR 347
>Q9CQ49:NCBP2_MOUSE Nuclear cap-binding protein subunit 2 - Mus musculus (Mouse)| Length = 156 Score = 38.1 bits (87), Expect = 0.042 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = +1 Query: 169 NEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFV 330 NE+ + + T+YVGNLS ++ F +G I+++ + DK GF FV Sbjct: 29 NEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFS--KSGDIKKIIMGLDKMKKTACGFCFV 86 Query: 331 RYSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 Y + +A A++ NG + R I+ W Sbjct: 87 EYYSRADAENAMRYINGTRLDDRIIRTDW 115
>P52298:NCBP2_HUMAN Nuclear cap-binding protein subunit 2 - Homo sapiens (Human)| Length = 156 Score = 38.1 bits (87), Expect = 0.042 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = +1 Query: 169 NEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFV 330 NE+ + + T+YVGNLS ++ F +G I+++ + DK GF FV Sbjct: 29 NEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFS--KSGDIKKIIMGLDKMKKTACGFCFV 86 Query: 331 RYSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 Y + +A A++ NG + R I+ W Sbjct: 87 EYYSRADAENAMRYINGTRLDDRIIRTDW 115
>Q3ZBJ1:NCBP2_BOVIN Nuclear cap-binding protein subunit 2 - Bos taurus (Bovine)| Length = 156 Score = 38.1 bits (87), Expect = 0.042 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = +1 Query: 169 NEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFV 330 NE+ + + T+YVGNLS ++ F +G I+++ + DK GF FV Sbjct: 29 NEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFS--KSGDIKKIIMGLDKMKKTACGFCFV 86 Query: 331 RYSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 Y + +A A++ NG + R I+ W Sbjct: 87 EYYSRADAENAMRYINGTRLDDRIIRTDW 115
>Q8JIY8:MK67I_DANRE MKI67 FHA domain-interacting nucleolar phosphoprotein-like - Danio| rerio (Zebrafish) (Brachydanio rerio) Length = 269 Score = 38.1 bits (87), Expect = 0.042 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 +YVG+L + + +F G + +RV+R K G+GFV + E A + Sbjct: 47 LYVGHLPRGLFEPQLKSYFEQFG--KVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAE 104 Query: 370 TGNGQLIGGRQIKC 411 T N L+G R IKC Sbjct: 105 TMNNYLMGERIIKC 118
>Q5SP50:ZCRB1_DANRE Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Danio rerio (Zebrafish) (Brachydanio rerio) Length = 218 Score = 37.7 bits (86), Expect = 0.055 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Frame = +1 Query: 193 PQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEA 354 P +TVYV N+ + ++D+H+ G + +V + +D KG FV + E A Sbjct: 7 PSKSTVYVSNIPFSLTNSDMHKLCSKY--GKVVKVTIVKDKHTRMSKGVAFVLFLDRESA 64 Query: 355 AQAIQTGNGQLIGGRQIKCS 414 ++ N + + GR +K S Sbjct: 65 YNCSRSLNNKQLFGRMVKAS 84
>O15042:SR140_HUMAN U2-associated protein SR140 - Homo sapiens (Human)| Length = 1029 Score = 37.7 bits (86), Expect = 0.055 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 15/132 (11%) Frame = +1 Query: 70 TKGANAGEVKQSTDSKGMVELISGSSEAGKENANED----GPED--NPQYTTVYVGNLSH 231 TKG + +DS G + S + + D G D +P T +Y+GN++ Sbjct: 224 TKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINP 283 Query: 232 DIDSNDVHRFFHLLGAGSIEEVRV---------TRDKGFGFVRYSTHEEAAQAIQTGNGQ 384 ++ + + F G + V++ R++ GFV + +A +A++ NG+ Sbjct: 284 QMNEEMLCQEFGRFGP--LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGK 341 Query: 385 LIGGRQIKCSWG 420 +I ++K WG Sbjct: 342 MIMSFEMKLGWG 353
>Q00916:RU17_YEAST U1 small nuclear ribonucleoprotein 70 kDa homolog - Saccharomyces| cerevisiae (Baker's yeast) Length = 300 Score = 37.7 bits (86), Expect = 0.055 Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 6/55 (10%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFV 330 +D Y T+++G L +D+D ++ ++F + G IE++R+ +D KG+ F+ Sbjct: 101 KDTDPYRTIFIGRLPYDLDEIELQKYF--VKFGEIEKIRIVKDKITQKSKGYAFI 153
>Q6NVP7:PABP2_XENTR Polyadenylate-binding protein 2 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 296 Score = 37.7 bits (86), Expect = 0.055 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 ++YVGN+ + + ++ FH G GS+ V + D KGF ++ +S E ++ Sbjct: 164 SIYVGNVDYGATAEELEAHFH--GCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSL 221 Query: 367 QTGNGQLIGGRQIK 408 + L GRQIK Sbjct: 222 AL-DESLFRGRQIK 234
>Q8CCS6:PABP2_MOUSE Polyadenylate-binding protein 2 - Mus musculus (Mouse)| Length = 302 Score = 37.7 bits (86), Expect = 0.055 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 ++YVGN+ + + ++ FH G GS+ V + D KGF ++ +S E ++ Sbjct: 169 SIYVGNVDYGATAEELEAHFH--GCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL 226 Query: 367 QTGNGQLIGGRQIK 408 + L GRQIK Sbjct: 227 AL-DESLFRGRQIK 239
>Q86U42:PABP2_HUMAN Polyadenylate-binding protein 2 - Homo sapiens (Human)| Length = 306 Score = 37.7 bits (86), Expect = 0.055 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 ++YVGN+ + + ++ FH G GS+ V + D KGF ++ +S E ++ Sbjct: 173 SIYVGNVDYGATAEELEAHFH--GCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL 230 Query: 367 QTGNGQLIGGRQIK 408 + L GRQIK Sbjct: 231 AL-DESLFRGRQIK 243
>Q28165:PABP2_BOVIN Polyadenylate-binding protein 2 - Bos taurus (Bovine)| Length = 306 Score = 37.7 bits (86), Expect = 0.055 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 ++YVGN+ + + ++ FH G GS+ V + D KGF ++ +S E ++ Sbjct: 173 SIYVGNVDYGATAEELEAHFH--GCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL 230 Query: 367 QTGNGQLIGGRQIK 408 + L GRQIK Sbjct: 231 AL-DESLFRGRQIK 243
>Q7ZXB8:PAB2B_XENLA Polyadenylate-binding protein 2-B - Xenopus laevis (African clawed| frog) Length = 295 Score = 37.7 bits (86), Expect = 0.055 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 ++YVGN+ + + ++ FH G GS+ V + D KGF ++ +S E ++ Sbjct: 163 SIYVGNVDYGATAEELEAHFH--GCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSL 220 Query: 367 QTGNGQLIGGRQIK 408 + L GRQIK Sbjct: 221 AL-DESLFRGRQIK 233
>Q6FUS6:NOP12_CANGA Nucleolar protein 12 - Candida glabrata (Yeast) (Torulopsis| glabrata) Length = 396 Score = 37.7 bits (86), Expect = 0.055 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 6/68 (8%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYST 342 P + + +V+VGNL + D + + H GSIE VR+ RD KGF +V+++ Sbjct: 221 PAPHDKQRSVFVGNLDFEEDEESLWK--HFGACGSIEYVRIVRDPKTNMGKGFAYVQFNE 278 Query: 343 HEEAAQAI 366 + ++A+ Sbjct: 279 LQSVSKAL 286
>Q23120:RSP2_CAEEL Probable splicing factor, arginine/serine-rich 2 - Caenorhabditis| elegans Length = 281 Score = 37.4 bits (85), Expect = 0.072 Identities = 21/66 (31%), Positives = 33/66 (50%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 VY+G L + DV FF G G + +V + GFGFV + +A A+ NG+ Sbjct: 4 VYIGRLPNRASDRDVEHFFR--GYGKLSDVIMKN--GFGFVDFQDQRDADDAVHDLNGKE 59 Query: 388 IGGRQI 405 + G ++ Sbjct: 60 LCGERV 65 Score = 33.9 bits (76), Expect = 0.80 Identities = 27/138 (19%), Positives = 57/138 (41%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A A+++LNGK L ++ + + E + + +G E ++ +N Sbjct: 48 ADDAVHDLNGKELCGERVILEFPRRKVGYNEERSGSGFRGREPTFRKGGE--RQFSNRYS 105 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQ 360 + ++ V + NLS D+ LG R+ V +++H++ Sbjct: 106 RPCSTRFRLV-IDNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQAIVCFTSHDDLRD 164 Query: 361 AIQTGNGQLIGGRQIKCS 414 A+ G+ + GR++KC+ Sbjct: 165 AMNKLQGEDLNGRKLKCT 182
>P40565:IST3_YEAST U2 snRNP component IST3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 148 Score = 37.4 bits (85), Expect = 0.072 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 +Y+GNL+ ++ D+ F G +V ++RD+ GF +++Y A+ Sbjct: 33 IYIGNLNRELTEGDILTVFSEYGVPV--DVILSRDENTGESQGFAYLKYEDQRSTILAVD 90 Query: 370 TGNGQLIGGRQIK 408 NG IGGR +K Sbjct: 91 NLNGFKIGGRALK 103
>Q5XI72:IF4H_RAT Eukaryotic translation initiation factor 4H - Rattus norvegicus| (Rat) Length = 248 Score = 37.4 bits (85), Expect = 0.072 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-- 312 GS+ + ++ P + P T YVGNL + D+ F L SI VR+ RD Sbjct: 23 GSAGGHGSRSQKELPTEPPY--TAYVGNLPFNTVQGDIDAIFKDL---SIRSVRLVRDKD 77 Query: 313 ----KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 KGF +V + + +A+ T +G L+G R ++ Sbjct: 78 TDKFKGFCYVEFDEVDSLKEAL-TYDGALLGDRSLR 112
>Q5RBR8:IF4H_PONPY Eukaryotic translation initiation factor 4H - Pongo pygmaeus| (Orangutan) Length = 228 Score = 37.4 bits (85), Expect = 0.072 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-- 312 GS+ + ++ P + P T YVGNL + D+ F L SI VR+ RD Sbjct: 23 GSAGGHGSRSQKELPTEPPY--TAYVGNLPFNTVQGDIDAIFKDL---SIRSVRLVRDKD 77 Query: 313 ----KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 KGF +V + + +A+ T +G L+G R ++ Sbjct: 78 TDKFKGFCYVEFDEVDSLKEAL-TYDGALLGDRSLR 112
>Q9WUK2:IF4H_MOUSE Eukaryotic translation initiation factor 4H - Mus musculus (Mouse)| Length = 248 Score = 37.4 bits (85), Expect = 0.072 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-- 312 GS+ + ++ P + P T YVGNL + D+ F L SI VR+ RD Sbjct: 23 GSAGGHGSRSQKELPTEPPY--TAYVGNLPFNTVQGDIDAIFKDL---SIRSVRLVRDKD 77 Query: 313 ----KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 KGF +V + + +A+ T +G L+G R ++ Sbjct: 78 TDKFKGFCYVEFDEVDSLKEAL-TYDGALLGDRSLR 112
>Q15056:IF4H_HUMAN Eukaryotic translation initiation factor 4H - Homo sapiens (Human)| Length = 248 Score = 37.4 bits (85), Expect = 0.072 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-- 312 GS+ + ++ P + P T YVGNL + D+ F L SI VR+ RD Sbjct: 23 GSAGGHGSRSQKELPTEPPY--TAYVGNLPFNTVQGDIDAIFKDL---SIRSVRLVRDKD 77 Query: 313 ----KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 KGF +V + + +A+ T +G L+G R ++ Sbjct: 78 TDKFKGFCYVEFDEVDSLKEAL-TYDGALLGDRSLR 112
>Q1JPH6:IF4H_BOVIN Eukaryotic translation initiation factor 4H - Bos taurus (Bovine)| Length = 228 Score = 37.4 bits (85), Expect = 0.072 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Frame = +1 Query: 139 GSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-- 312 GS+ + ++ P + P T YVGNL + D+ F L SI VR+ RD Sbjct: 23 GSAGGHGSRSQKELPTEPPY--TAYVGNLPFNTVQGDIDAIFKDL---SIRSVRLVRDKD 77 Query: 313 ----KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 KGF +V + + +A+ T +G L+G R ++ Sbjct: 78 TDKFKGFCYVEFDEVDSLKEAL-TYDGALLGDRSLR 112
>Q62826:HNRPM_RAT Heterogeneous nuclear ribonucleoprotein M - Rattus norvegicus (Rat)| Length = 690 Score = 37.4 bits (85), Expect = 0.072 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 13/123 (10%) Frame = +1 Query: 70 TKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDGPEDNPQY----------TTVYVG 219 ++G E K K E+++ S +G+ ++ P+ +TV+V Sbjct: 110 SRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVFVA 169 Query: 220 NLSHDIDSNDVHRFFHLLGA---GSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLI 390 NL + + + F + G I E + + +G G V + EA QAI NGQL+ Sbjct: 170 NLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLL 229 Query: 391 GGR 399 R Sbjct: 230 FDR 232
>P25555:GBP2_YEAST Single-strand telomeric DNA-binding protein GBP2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 427 Score = 37.4 bits (85), Expect = 0.072 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 3/107 (2%) Frame = +1 Query: 109 DSKGMVELISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSI 288 D K MV + EA KE + + E+ V++ NL + ++ + F G Sbjct: 188 DRKLMVRQDNPPPEAAKEFSKKATREEIDNGFEVFIINLPYSMNWQSLKDMFKECGHVLR 247 Query: 289 EEVRVTRD---KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWG 420 +V + + +GFG V Y T +E +AI T NG + GR ++ G Sbjct: 248 ADVELDFNGFSRGFGSVIYPTEDEMIRAIDTFNGMEVEGRVLEVREG 294
>Q5R9L3:G3BP2_PONPY Ras GTPase-activating protein-binding protein 2 - Pongo pygmaeus| (Orangutan) Length = 482 Score = 37.4 bits (85), Expect = 0.072 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 6/58 (10%) Frame = +1 Query: 193 PQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRV-TRDKG-----FGFVRYSTHE 348 P ++VGNL HDID N++ FF + G++ E+R+ T+ G FGFV + E Sbjct: 328 PDSHQLFVGNLPHDIDENELKEFF--MSFGNVVELRINTKGVGGKLPNFGFVVFDDSE 383
>P97379:G3BP2_MOUSE Ras GTPase-activating protein-binding protein 2 - Mus musculus| (Mouse) Length = 482 Score = 37.4 bits (85), Expect = 0.072 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 6/58 (10%) Frame = +1 Query: 193 PQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRV-TRDKG-----FGFVRYSTHE 348 P ++VGNL HDID N++ FF + G++ E+R+ T+ G FGFV + E Sbjct: 328 PDSHQLFVGNLPHDIDENELKEFF--MSFGNVVELRINTKGVGGKLPNFGFVVFDDSE 383
>Q9UN86:G3BP2_HUMAN Ras GTPase-activating protein-binding protein 2 - Homo sapiens| (Human) Length = 482 Score = 37.4 bits (85), Expect = 0.072 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 6/58 (10%) Frame = +1 Query: 193 PQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRV-TRDKG-----FGFVRYSTHE 348 P ++VGNL HDID N++ FF + G++ E+R+ T+ G FGFV + E Sbjct: 328 PDSHQLFVGNLPHDIDENELKEFF--MSFGNVVELRINTKGVGGKLPNFGFVVFDDSE 383
>O42923:CIP1_SCHPO RNA-binding post-transcriptional regulator cip1 -| Schizosaccharomyces pombe (Fission yeast) Length = 490 Score = 37.4 bits (85), Expect = 0.072 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 4/109 (3%) Frame = +1 Query: 103 STDSKGMVELISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAG 282 S D+ ++ +GS+ E G + P T + V N+ ++ + + F LG Sbjct: 171 SLDAFNSTQIKAGSTANSNSTPVEPGEDTIP--TAIVVKNIPFSLEKDTLLDHFKQLGIP 228 Query: 283 SIEEVRVTRD----KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 D +G F + EEA +QT NG I GR+++ W Sbjct: 229 RPYAFNYHYDNGIFRGLAFANFYRPEEAQVVVQTLNGYEINGRRLRVEW 277
>Q6NV83:SR140_MOUSE U2-associated protein SR140 - Mus musculus (Mouse)| Length = 1029 Score = 37.0 bits (84), Expect = 0.094 Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 15/132 (11%) Frame = +1 Query: 70 TKGANAGEVKQSTDSKGMVELISGSSEAGKENANED----GPED--NPQYTTVYVGNLSH 231 TKG + +DS G + S + + D G D +P T +Y+GN++ Sbjct: 224 TKGRLSRFEPPQSDSDGQRRSMDVPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINP 283 Query: 232 DIDSNDVHRFFHLLGAGSIEEVRV---------TRDKGFGFVRYSTHEEAAQAIQTGNGQ 384 ++ + + F G + V++ R++ GFV + + +A +A++ NG+ Sbjct: 284 QMNEEMLCQEFGRFGP--LASVKIMWPRTDEERARERNCGFVAFMSRRDAERALKNLNGK 341 Query: 385 LIGGRQIKCSWG 420 +I ++K WG Sbjct: 342 MIMSFEMKLGWG 353
>Q6PDU1:SFRS2_RAT Splicing factor, arginine/serine-rich 2 - Rattus norvegicus (Rat)| Length = 221 Score = 37.0 bits (84), Expect = 0.094 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYST 342 P D T++ V NL++ + + R F G + +V + RD+ GF FVR+ Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGR--VGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 343 HEEAAQAIQTGNGQLIGGRQIK 408 +A A+ +G ++ GR+++ Sbjct: 65 KRDAEDAMDAMDGAVLDGRELR 86
>Q06A98:SFRS2_PIG Splicing factor, arginine/serine-rich 2 - Sus scrofa (Pig)| Length = 221 Score = 37.0 bits (84), Expect = 0.094 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYST 342 P D T++ V NL++ + + R F G + +V + RD+ GF FVR+ Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGR--VGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 343 HEEAAQAIQTGNGQLIGGRQIK 408 +A A+ +G ++ GR+++ Sbjct: 65 KRDAEDAMDAMDGAVLDGRELR 86
>Q5R1W5:SFRS2_PANTR Splicing factor, arginine/serine-rich 2 - Pan troglodytes| (Chimpanzee) Length = 221 Score = 37.0 bits (84), Expect = 0.094 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYST 342 P D T++ V NL++ + + R F G + +V + RD+ GF FVR+ Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGR--VGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 343 HEEAAQAIQTGNGQLIGGRQIK 408 +A A+ +G ++ GR+++ Sbjct: 65 KRDAEDAMDAMDGAVLDGRELR 86
>Q62093:SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 - Mus musculus (Mouse)| Length = 221 Score = 37.0 bits (84), Expect = 0.094 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYST 342 P D T++ V NL++ + + R F G + +V + RD+ GF FVR+ Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGR--VGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 343 HEEAAQAIQTGNGQLIGGRQIK 408 +A A+ +G ++ GR+++ Sbjct: 65 KRDAEDAMDAMDGAVLDGRELR 86
>Q01130:SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 - Homo sapiens (Human)| Length = 221 Score = 37.0 bits (84), Expect = 0.094 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYST 342 P D T++ V NL++ + + R F G + +V + RD+ GF FVR+ Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGR--VGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 343 HEEAAQAIQTGNGQLIGGRQIK 408 +A A+ +G ++ GR+++ Sbjct: 65 KRDAEDAMDAMDGAVLDGRELR 86
>P30352:SFRS2_CHICK Splicing factor, arginine/serine-rich 2 - Gallus gallus (Chicken)| Length = 221 Score = 37.0 bits (84), Expect = 0.094 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYST 342 P D T++ V NL++ + + R F G + +V + RD+ GF FVR+ Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGR--VGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 343 HEEAAQAIQTGNGQLIGGRQIK 408 +A A+ +G ++ GR+++ Sbjct: 65 KRDAEDAMDAMDGAVLDGRELR 86
>Q3MHR5:SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 - Bos taurus (Bovine)| Length = 221 Score = 37.0 bits (84), Expect = 0.094 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYST 342 P D T++ V NL++ + + R F G + +V + RD+ GF FVR+ Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGR--VGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 343 HEEAAQAIQTGNGQLIGGRQIK 408 +A A+ +G ++ GR+++ Sbjct: 65 KRDAEDAMDAMDGAVLDGRELR 86
>Q9WX37:RBPE_ANASP Putative RNA-binding protein rbpE - Anabaena sp. (strain PCC 7120)| Length = 99 Score = 37.0 bits (84), Expect = 0.094 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 ++YVGNLS+ + +D+ + F GS+ V++ D +GFGFV + AI Sbjct: 2 SIYVGNLSYSVTQDDLTKVFS--EYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAI 59 Query: 367 QTGNGQLIGGRQIK 408 Q +G GR +K Sbjct: 60 QALDGAEWMGRVLK 73
>Q28ZX3:PABP2_DROPS Polyadenylate-binding protein 2 - Drosophila pseudoobscura (Fruit| fly) Length = 225 Score = 37.0 bits (84), Expect = 0.094 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT------RDKGFGFVRYSTHEEAAQAI 366 +VYVGN+ + + ++ FH G G+I V + KGF ++ + + E A+ Sbjct: 97 SVYVGNVDYGASAEELEAHFH--GCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154 Query: 367 QTGNGQLIGGRQIK 408 N L GRQIK Sbjct: 155 AM-NETLFRGRQIK 167
>Q7KNF2:PABP2_DROME Polyadenylate-binding protein 2 - Drosophila melanogaster (Fruit| fly) Length = 224 Score = 37.0 bits (84), Expect = 0.094 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT------RDKGFGFVRYSTHEEAAQAI 366 +VYVGN+ + + ++ FH G G+I V + KGF ++ + + E A+ Sbjct: 97 SVYVGNVDYGASAEELEAHFH--GCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154 Query: 367 QTGNGQLIGGRQIK 408 N L GRQIK Sbjct: 155 AM-NETLFRGRQIK 167
>A0JM51:CELF5_XENTR CUG-BP- and ETR-3-like factor 5 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 486 Score = 37.0 bits (84), Expect = 0.094 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-----DKGFGFVRYSTHEEAAQAIQT 372 ++VG LS +V F G SIEE V R KG FV++S+H EA AIQ Sbjct: 137 LFVGMLSKQQSEEEVTSMFQAFG--SIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQA 194 Query: 373 GNG 381 +G Sbjct: 195 LHG 197 Score = 33.5 bits (75), Expect = 1.0 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Frame = +1 Query: 187 DNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG------FGFVRYSTHE 348 + P+ +++ +L + N++ + F L G+I +V D+ FGFV + Sbjct: 396 EGPEGCNLFIYHLPQEFGDNELTQMF--LPFGNIISSKVFMDRATNQSKCFGFVSFDNPS 453 Query: 349 EAAQAIQTGNGQLIGGRQIK 408 A AIQ NG IG +++K Sbjct: 454 SAQTAIQAMNGFQIGMKRLK 473
>O13845:RSD1_SCHPO RNA-binding protein rsd1 - Schizosaccharomyces pombe (Fission| yeast) Length = 604 Score = 36.6 bits (83), Expect = 0.12 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Frame = +1 Query: 214 VGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFGFVRYSTHEEAAQAIQTGN 378 V N+ ++ DV F G IE V + RD KGFG+++Y A A++ N Sbjct: 344 VSNIHFNLTDEDVKAIFEPFG--DIEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMN 401 Query: 379 GQLIGGRQIKCSWGS 423 G + GR ++ G+ Sbjct: 402 GFDLAGRNMRVCLGN 416 Score = 32.7 bits (73), Expect = 1.8 Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Frame = +1 Query: 184 EDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTH 345 E+ TV+V L++ + S +++ FF AG + + ++ RD KG +V + Sbjct: 234 EEERDRRTVFVSQLANRLTSRELYDFFE--QAGPVRDAQIVRDKISGRSKGVAYVEFCHE 291 Query: 346 EEAAQAIQTGNGQLIG 393 + AI +L+G Sbjct: 292 DSVQAAIALSGKRLLG 307
>Q9WX39:RBPF_ANASP Putative RNA-binding protein rbpF - Anabaena sp. (strain PCC 7120)| Length = 105 Score = 36.6 bits (83), Expect = 0.12 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 ++YVGNLS+++ D+ F GS++ V + D +GF FV + E AI Sbjct: 2 SIYVGNLSYEVTQEDISNVF--AEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAI 59 Query: 367 QTGNGQLIGGRQIK 408 + +G GR +K Sbjct: 60 EGLDGAEWMGRDLK 73
>Q5RC80:RBM39_PONPY RNA-binding protein 39 - Pongo pygmaeus (Orangutan)| Length = 524 Score = 36.6 bits (83), Expect = 0.12 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 6/73 (8%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 +YVG+L +I + + F G IE +++ D KG+GF+ +S E A +A++ Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGR--IESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309 Query: 370 TGNGQLIGGRQIK 408 NG + GR +K Sbjct: 310 QLNGFELAGRPMK 322
>Q8VH51:RBM39_MOUSE RNA-binding protein 39 - Mus musculus (Mouse)| Length = 530 Score = 36.6 bits (83), Expect = 0.12 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 6/73 (8%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 +YVG+L +I + + F G IE +++ D KG+GF+ +S E A +A++ Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGR--IESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309 Query: 370 TGNGQLIGGRQIK 408 NG + GR +K Sbjct: 310 QLNGFELAGRPMK 322
>Q14498:RBM39_HUMAN RNA-binding protein 39 - Homo sapiens (Human)| Length = 530 Score = 36.6 bits (83), Expect = 0.12 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 6/73 (8%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAIQ 369 +YVG+L +I + + F G IE +++ D KG+GF+ +S E A +A++ Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGR--IESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309 Query: 370 TGNGQLIGGRQIK 408 NG + GR +K Sbjct: 310 QLNGFELAGRPMK 322
>Q8R3C6:RBM19_MOUSE Probable RNA-binding protein 19 - Mus musculus (Mouse)| Length = 952 Score = 36.6 bits (83), Expect = 0.12 Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%) Frame = +1 Query: 46 RQIRCNWATKGANAGEV---KQSTDSKGMVELISGSSEAGKENANEDGPEDNPQYTTVYV 216 + ++CN G EV KQ+ ++G + S + G+ + ED ++V Sbjct: 347 KALKCNRDYMGGRYIEVFREKQAPTARGPPK--STTPWQGRTLGENEEEEDLADSGRLFV 404 Query: 217 GNLSHDIDSNDVHRFFHLLGAGSIEEVRVT----RDKGFGFVRYSTHEEAAQAIQTGNGQ 384 NLS+ D+ + F G S + + KGF FV + E A +A +GQ Sbjct: 405 RNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQ 464 Query: 385 LIGGRQI 405 + GR + Sbjct: 465 VFQGRML 471
>Q86YN6:PRGC2_HUMAN Peroxisome proliferator-activated receptor gamma coactivator 1-beta -| Homo sapiens (Human) Length = 1023 Score = 36.6 bits (83), Expect = 0.12 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 4/60 (6%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRV----TRDKGFGFVRYSTHEEAAQAIQTG 375 VY+ NLS D+ S ++ R F + G IEE V R + +GF+ Y E AA ++ G Sbjct: 904 VYIQNLSSDMSSRELKRRFEVF--GEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTKG 961
>Q4PC17:MRD1_USTMA Multiple RNA-binding domain-containing protein 1 - Ustilago maydis| (Smut fungus) Length = 858 Score = 36.6 bits (83), Expect = 0.12 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFGFVRYSTHEEAAQAI 366 T + + NL + D+ F G ++ VR+ + +GFGFV YST EA A+ Sbjct: 719 TKILIKNLPFEATKRDIRDLFS--SQGQLKSVRLPKKFDNTTRGFGFVEYSTVREAQSAM 776 Query: 367 QTGNGQLIGGRQIKCSW 417 + + GR + W Sbjct: 777 EALKHTHLLGRHLVLQW 793 Score = 31.2 bits (69), Expect = 5.2 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 9/108 (8%) Frame = +1 Query: 94 VKQSTDSKGMVELISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLL 273 V +S DS + G + AG + DG T+YV NLS + FFH L Sbjct: 592 VGKSIDSSNPSVDLDGPAGAGAGDEAVDG-------ATLYVKNLSFSTTDERLTAFFHGL 644 Query: 274 GAGSIEEVRVTRD---------KGFGFVRYSTHEEAAQAIQTGNGQLI 390 + ++ D G+GFV + + + A A + +G+++ Sbjct: 645 SDFAFARIQTKPDPRRPGARLSMGYGFVGFKSIDAARTAQKAMDGKVL 692
>Q4WJT7:MRD1_ASPFU Multiple RNA-binding domain-containing protein 1 - Aspergillus| fumigatus (Sartorya fumigata) Length = 825 Score = 36.6 bits (83), Expect = 0.12 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 10/108 (9%) Frame = +1 Query: 106 TDSKGMVELISGSSEAGKENANEDGPEDNPQY----TTVYVGNLSHDIDSNDVHRFFHLL 273 T SK + A + + E+ + N ++ + ++V NL +D +D+ F Sbjct: 265 TVSKAGAQHSDDDKAAVESSVEEEEVDTNIEHIRLSSRLFVRNLPYDASESDLEPVFSKF 324 Query: 274 GAGSIEEVRV------TRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGR 399 G IEE+ V T KGF +V+Y + A QA + +G+ GR Sbjct: 325 G--KIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKELDGKHFQGR 370 Score = 30.4 bits (67), Expect = 8.8 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 12/105 (11%) Frame = +1 Query: 127 ELISGSSEAGKENANEDGPEDNPQY-----TTVYVGNLSHDIDSNDVHRFFHLLGA-GSI 288 EL+ +S + A E ED + T + + NL DV F GA G + Sbjct: 672 ELVVRASNKAMDAAEERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLF---GAYGQL 728 Query: 289 EEVRVTRD-----KGFGFVRYSTHEEAAQAIQT-GNGQLIGGRQI 405 VRV + +GFGF + + EA A+ N L+G R + Sbjct: 729 RSVRVPKKFDRSARGFGFADFVSAREAENAMDALKNTHLLGRRLV 773
>O04425:FCA_ARATH Flowering time control protein FCA - Arabidopsis thaliana| (Mouse-ear cress) Length = 747 Score = 36.6 bits (83), Expect = 0.12 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-----KGFGFVRYSTHEEAAQAIQT 372 ++VG+L+ +V F L G +E+V + RD +G GFV+YS+ E A AI Sbjct: 213 LFVGSLNKQATEKEVEEIF--LQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDG 270 Query: 373 GNG 381 NG Sbjct: 271 LNG 273 Score = 30.4 bits (67), Expect = 8.8 Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 4/71 (5%) Frame = +1 Query: 187 DNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEVRVTRDKGFGFVRYSTHEEA 354 D ++VG++ ++ +F ++L I++ R + +G FV+Y+T ++A Sbjct: 115 DRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDA 174 Query: 355 AQAIQTGNGQL 387 +AI+ + Q+ Sbjct: 175 DRAIRALHNQI 185
>O97018:SXL_CHRRU Sex-lethal homolog - Chrysomya rufifacies (Hairy maggot blowfly)| Length = 307 Score = 36.2 bits (82), Expect = 0.16 Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 6/138 (4%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 AQ AI LNG + N++++ ++A G + +K Sbjct: 139 AQNAIKSLNGVTVRNKRLKVSYARPGGES--IKD-------------------------- 170 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYST 342 T +YV NL I +++ + F G +I + + RDK G FVR++ Sbjct: 171 -------TNLYVTNLPRTITDDELEKIFGKYG--NIVQKNILRDKLTGKPRGVAFVRFNK 221 Query: 343 HEEAAQAIQTGNGQLIGG 396 EEA +AI N + G Sbjct: 222 REEAQEAISALNNVIPEG 239
>P39697:RT19_ARATH 40S ribosomal protein S19, mitochondrial precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 212 Score = 36.2 bits (82), Expect = 0.16 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVT------RDKGFGFVRYSTHEEAAQA 363 T +Y+G LS D + + F + E RV R +G+GFV + + + A A Sbjct: 31 TKLYIGGLSPGTDEHSLKDAFSSFNG--VTEARVMTNKVTGRSRGYGFVNFISEDSANSA 88 Query: 364 IQTGNGQLIGGRQI 405 I NGQ + G I Sbjct: 89 ISAMNGQELNGFNI 102
>Q9GRW7:NONA_DROVI Protein no-on-transient A - Drosophila virilis (Fruit fly)| Length = 697 Score = 36.2 bits (82), Expect = 0.16 Identities = 20/67 (29%), Positives = 35/67 (52%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 +YVGNL++DI ++ F G I E+ +K F F++ H A +A + +G + Sbjct: 287 LYVGNLTNDITDEELREMFK--PYGEIGEIFSNLEKNFTFLKVDYHINAEKAKRPLDGSM 344 Query: 388 IGGRQIK 408 GR ++ Sbjct: 345 RKGRHVR 351
>Q5BGA9:MRD1_EMENI Multiple RNA-binding domain-containing protein 1 - Emericella| nidulans (Aspergillus nidulans) Length = 819 Score = 36.2 bits (82), Expect = 0.16 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 6/70 (8%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRV------TRDKGFGFVRYSTHEEAAQAIQ 369 ++V NLS++ +++ F G IEE+ V T KGF +V+Y+ + A +A + Sbjct: 297 LFVRNLSYETKESELEPVFSPFG--KIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYR 354 Query: 370 TGNGQLIGGR 399 +G++ GR Sbjct: 355 NLDGKIFQGR 364 Score = 31.2 bits (69), Expect = 5.2 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 12/104 (11%) Frame = +1 Query: 130 LISGSSEAGKENANEDGPEDNPQY-----TTVYVGNLSHDIDSNDVHRFFHLLGA-GSIE 291 L+ +S G + A E ED + T + + NL DV F GA G + Sbjct: 668 LVVRASHKGMDAAEERRKEDTAKKIAARRTKIIIKNLPFQATKKDVRSLF---GAYGQLR 724 Query: 292 EVRVTRD-----KGFGFVRYSTHEEAAQAIQT-GNGQLIGGRQI 405 VRV + +GFGF + + EA A+ N L+G R + Sbjct: 725 SVRVPKKFDRSARGFGFADFVSAREAENAMDALKNTHLLGRRLV 768
>Q9D0E1:HNRPM_MOUSE Heterogeneous nuclear ribonucleoprotein M - Mus musculus (Mouse)| Length = 729 Score = 36.2 bits (82), Expect = 0.16 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGA---GSIEEVRVTRDKGFGFVRYSTHEEAAQAIQT 372 +TV+V NL + + + F + G I E + + +G G V + EA QAI Sbjct: 203 STVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAISM 262 Query: 373 GNGQLIGGR 399 NGQL+ R Sbjct: 263 FNGQLLFDR 271
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 36.2 bits (82), Expect = 0.16 Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 4/83 (4%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGS----IEEVRVTRDKGFG 324 KE + DN + ++VG + H+ ++ +F G + I + R +GFG Sbjct: 98 KEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFG 157 Query: 325 FVRYSTHEEAAQAIQTGNGQLIG 393 F+ + + QA+ ++G Sbjct: 158 FITFEDEQSVDQAVNMHFHDIMG 180
>Q8C7E9:CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant - Mus| musculus (Mouse) Length = 632 Score = 36.2 bits (82), Expect = 0.16 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 +V+VGN+ ++ + F +G S+ R+ D KG+GF Y E A A+ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVG--SVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74 Query: 367 QTGNGQLIGGRQIK 408 + NG+ GR ++ Sbjct: 75 RNLNGREFSGRALR 88
>Q9H0L4:CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit, tau variant - Homo| sapiens (Human) Length = 616 Score = 36.2 bits (82), Expect = 0.16 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 +V+VGN+ ++ + F +G S+ R+ D KG+GF Y E A A+ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVG--SVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74 Query: 367 QTGNGQLIGGRQIK 408 + NG+ GR ++ Sbjct: 75 RNLNGREFSGRALR 88
>Q24207:BOULE_DROME Protein boule - Drosophila melanogaster (Fruit fly)| Length = 228 Score = 36.2 bits (82), Expect = 0.16 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 8/79 (10%) Frame = +1 Query: 193 PQYTT-----VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR---DKGFGFVRYSTHE 348 P+Y T ++VG +S D D+ R F G ++ V R KG+GFV + T + Sbjct: 25 PKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETEQ 84 Query: 349 EAAQAIQTGNGQLIGGRQI 405 EA + G ++ R++ Sbjct: 85 EAQRLQADGECVVLRDRKL 103
>Q9D0B0:SFRS9_MOUSE Splicing factor, arginine/serine-rich 9 - Mus musculus (Mouse)| Length = 222 Score = 35.8 bits (81), Expect = 0.21 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%) Frame = +1 Query: 166 ANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG---FGFVRY 336 A+E G E + + +YVGNL D+ D+ F+ G I E+ + G F FVR+ Sbjct: 6 ADERGGEGDGR---IYVGNLPSDVREKDLEDLFYKY--GRIREIELKNRHGLVPFAFVRF 60 Query: 337 STHEEAAQAIQTGNG 381 +A AI NG Sbjct: 61 EDPRDAEDAIYGRNG 75
>Q8VIJ6:SFPQ_MOUSE Splicing factor, proline- and glutamine-rich - Mus musculus (Mouse)| Length = 699 Score = 35.8 bits (81), Expect = 0.21 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 3/91 (3%) Frame = +1 Query: 145 SEAGKENAN---EDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK 315 SE K N + G + Q ++VGNL DI ++ R F G EV + + K Sbjct: 267 SEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPG--EVFINKGK 324 Query: 316 GFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 GFGF++ + A A + + GRQ++ Sbjct: 325 GFGFIKLESRALAEIAKAELDDTPMRGRQLR 355
>P23246:SFPQ_HUMAN Splicing factor, proline- and glutamine-rich - Homo sapiens (Human)| Length = 707 Score = 35.8 bits (81), Expect = 0.21 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 3/91 (3%) Frame = +1 Query: 145 SEAGKENAN---EDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK 315 SE K N + G + Q ++VGNL DI ++ R F G EV + + K Sbjct: 275 SEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPG--EVFINKGK 332 Query: 316 GFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 GFGF++ + A A + + GRQ++ Sbjct: 333 GFGFIKLESRALAEIAKAELDDTPMRGRQLR 363
>Q9DDY9:PAB2A_XENLA Polyadenylate-binding protein 2-A - Xenopus laevis (African clawed| frog) Length = 296 Score = 35.8 bits (81), Expect = 0.21 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAAQAI 366 ++YVGN+ + + ++ FH G GS+ V + D KGF ++ + E ++ Sbjct: 164 SIYVGNVDYGATAEELEAHFH--GCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSL 221 Query: 367 QTGNGQLIGGRQIK 408 + L GRQIK Sbjct: 222 AL-DESLFRGRQIK 234
>P23588:IF4B_HUMAN Eukaryotic translation initiation factor 4B - Homo sapiens (Human)| Length = 611 Score = 35.8 bits (81), Expect = 0.21 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 4/90 (4%) Frame = +1 Query: 151 AGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSI----EEVRVTRDKG 318 A + N + +P YT ++GNL +D+ + FF L ++ E R KG Sbjct: 80 AREPNIDRSRLPKSPPYTA-FLGNLPYDVTEESIKEFFRGLNISAVRLPREPSNPERLKG 138 Query: 319 FGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 FG+ + + A+ N + +G R+I+ Sbjct: 139 FGYAEFEDLDSLLSALSL-NEESLGNRRIR 167
>Q99069:GRP1_SORBI Glycine-rich RNA-binding protein 1 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 142 Score = 35.8 bits (81), Expect = 0.21 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Frame = +1 Query: 244 NDVHRFFHLLG----AGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 405 N +H F G + I + R +GFGFV +ST E AI+ NG+ + GR I Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNI 58
>P43607:YFK2_YEAST Uncharacterized RNA-binding protein YFR032C - Saccharomyces| cerevisiae (Baker's yeast) Length = 289 Score = 35.4 bits (80), Expect = 0.27 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 14/96 (14%) Frame = +1 Query: 160 ENANEDGPEDNPQ-YTTVYVGNLSHDIDSNDVHRFFHLLGAGSI----EEVR-------- 300 E N D D TTVY+ NL D+H F + GA S+ + VR Sbjct: 3 EQVNNDTTSDTTTTITTVYISNLPFTASERDLHAFLNNYGASSVLIPTQTVRRFSKRHNS 62 Query: 301 -VTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQI 405 + G F +++ + A +AIQ NG + +++ Sbjct: 63 NPRKPLGIAFAQFANNTLALKAIQDLNGTVFQNQKL 98
>Q6PFR5:TRA2A_MOUSE Transformer-2 protein homolog - Mus musculus (Mouse)| Length = 281 Score = 35.4 bits (80), Expect = 0.27 Identities = 15/54 (27%), Positives = 30/54 (55%) Frame = +1 Query: 256 RFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 R+ L G + + R R +GF FV + +++ +A++ NG + GR+I+ + Sbjct: 139 RYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDY 192
>Q13595:TRA2A_HUMAN Transformer-2 protein homolog - Homo sapiens (Human)| Length = 282 Score = 35.4 bits (80), Expect = 0.27 Identities = 15/54 (27%), Positives = 30/54 (55%) Frame = +1 Query: 256 RFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSW 417 R+ L G + + R R +GF FV + +++ +A++ NG + GR+I+ + Sbjct: 141 RYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
>Q24668:SXL_DROSU Protein sex-lethal - Drosophila subobscura (Fruit fly)| Length = 354 Score = 35.4 bits (80), Expect = 0.27 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 6/71 (8%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQA 363 T +YV NL I + + F G SI + + RDK G FVRY+ EEA +A Sbjct: 213 TNLYVTNLPRTITDDQLDTIFGKYG--SIVQKNILRDKLTGRPRGVAFVRYNKREEAQEA 270 Query: 364 IQTGNGQLIGG 396 I N + G Sbjct: 271 ISALNNVIPEG 281
>P19339:SXL_DROME Protein sex-lethal - Drosophila melanogaster (Fruit fly)| Length = 354 Score = 35.4 bits (80), Expect = 0.27 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 6/71 (8%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQA 363 T +YV NL I + + F G SI + + RDK G FVRY+ EEA +A Sbjct: 211 TNLYVTNLPRTITDDQLDTIFGKYG--SIVQKNILRDKLTGRPRGVAFVRYNKREEAQEA 268 Query: 364 IQTGNGQLIGG 396 I N + G Sbjct: 269 ISALNNVIPEG 279
>Q5PPI1:SFRS9_RAT Splicing factor, arginine/serine-rich 9 - Rattus norvegicus (Rat)| Length = 221 Score = 35.4 bits (80), Expect = 0.27 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%) Frame = +1 Query: 166 ANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG---FGFVRY 336 A+E G E + + +YVGNL D+ D+ F+ G I E+ + G F FVR+ Sbjct: 5 ADERGGEGDGR---IYVGNLPTDVREKDLEDLFYKY--GRIREIELKNRHGLVPFAFVRF 59 Query: 337 STHEEAAQAIQTGNG 381 +A AI NG Sbjct: 60 EDPRDAEDAIYGRNG 74
>Q13242:SFRS9_HUMAN Splicing factor, arginine/serine-rich 9 - Homo sapiens (Human)| Length = 221 Score = 35.4 bits (80), Expect = 0.27 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%) Frame = +1 Query: 166 ANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG---FGFVRY 336 A+E G E + + +YVGNL D+ D+ F+ G I E+ + G F FVR+ Sbjct: 5 ADERGGEGDGR---IYVGNLPTDVREKDLEDLFYKY--GRIREIELKNRHGLVPFAFVRF 59 Query: 337 STHEEAAQAIQTGNG 381 +A AI NG Sbjct: 60 EDPRDAEDAIYGRNG 74
>P84104:SFRS3_MOUSE Splicing factor, arginine/serine-rich 3 - Mus musculus (Mouse)| Length = 164 Score = 35.4 bits (80), Expect = 0.27 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-KGFGFVRYSTHEEAAQAIQTGNGQ 384 VYVGNL ++ + ++ R F G + V V R+ GF FV + +AA A++ +G+ Sbjct: 12 VYVGNLGNNGNKTELERAFGYY--GPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69 Query: 385 LIGGRQIK 408 + G +++ Sbjct: 70 TLCGCRVR 77
>P84103:SFRS3_HUMAN Splicing factor, arginine/serine-rich 3 - Homo sapiens (Human)| Length = 164 Score = 35.4 bits (80), Expect = 0.27 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-KGFGFVRYSTHEEAAQAIQTGNGQ 384 VYVGNL ++ + ++ R F G + V V R+ GF FV + +AA A++ +G+ Sbjct: 12 VYVGNLGNNGNKTELERAFGYY--GPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69 Query: 385 LIGGRQIK 408 + G +++ Sbjct: 70 TLCGCRVR 77
>Q3SZR8:SFRS3_BOVIN Splicing factor, arginine/serine-rich 3 - Bos taurus (Bovine)| Length = 164 Score = 35.4 bits (80), Expect = 0.27 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-KGFGFVRYSTHEEAAQAIQTGNGQ 384 VYVGNL ++ + ++ R F G + V V R+ GF FV + +AA A++ +G+ Sbjct: 12 VYVGNLGNNGNKTELERAFGYY--GPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69 Query: 385 LIGGRQIK 408 + G +++ Sbjct: 70 TLCGCRVR 77
>O22315:SFRS1_ARATH Pre-mRNA-splicing factor SF2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 303 Score = 35.4 bits (80), Expect = 0.27 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRV-TRDKGFGFVRYSTHEEAAQAIQTGNG 381 TVYVGNL DI +V F G +++V R G+ FV + +A AI +G Sbjct: 8 TVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDG 67 Query: 382 QLIGGRQIK 408 G +++ Sbjct: 68 YDFDGHRLR 76
>Q94901:LARK_DROME RNA-binding protein lark - Drosophila melanogaster (Fruit fly)| Length = 352 Score = 35.4 bits (80), Expect = 0.27 Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 5/114 (4%) Frame = +1 Query: 82 NAGEVKQSTDSKGM--VELISG---SSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSN 246 N G V T+ +G ++ ++G + A K A + N T ++VGNL+ + Sbjct: 41 NYGFVHMETEQQGRDAIQNLNGYTLNEFAIKVEAAKSRRAPNTPTTKIFVGNLTDKTRAP 100 Query: 247 DVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 +V F G ++ E + R+ +GFV + AI+ NG+++ G+ +K Sbjct: 101 EVRELFQKYG--TVVECDIVRN--YGFVHLDCVGDVQDAIKELNGRVVDGQPLK 150 Score = 31.6 bits (70), Expect = 4.0 Identities = 19/67 (28%), Positives = 31/67 (46%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQL 387 +++GNL + ++ F G ++ E V K +GFV T ++ AIQ NG Sbjct: 9 LFIGNLDEKTQATELRALFEKYG--TVVECDVV--KNYGFVHMETEQQGRDAIQNLNGYT 64 Query: 388 IGGRQIK 408 + IK Sbjct: 65 LNEFAIK 71
>Q8BGD9:IF4B_MOUSE Eukaryotic translation initiation factor 4B - Mus musculus (Mouse)| Length = 611 Score = 35.4 bits (80), Expect = 0.27 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 4/90 (4%) Frame = +1 Query: 151 AGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSI----EEVRVTRDKG 318 A + N + +P YT ++GNL +D+ + + FF L ++ E R KG Sbjct: 80 AREPNIDRSRLPKSPPYTA-FLGNLPYDVTEDSIKDFFRGLNISAVRLPREPSNPDRLKG 138 Query: 319 FGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 FG+ + + A+ N + +G R+I+ Sbjct: 139 FGYAEFEDLDSLLSALSL-NEESLGNRRIR 167
>P52272:HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M - Homo sapiens (Human)| Length = 730 Score = 35.4 bits (80), Expect = 0.27 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGA---GSIEEVRVTRDKGFGFVRYSTHEEAAQAIQT 372 +TV+V NL + + + F + G I E + + +G G V + EA QAI Sbjct: 204 STVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISM 263 Query: 373 GNGQLIGGR 399 NGQL+ R Sbjct: 264 FNGQLLFDR 272
>P49311:GRP2_SINAL Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White| mustard) (Brassica hirta) Length = 169 Score = 35.4 bits (80), Expect = 0.27 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Frame = +1 Query: 211 YVGNLSHDIDSNDVH----RFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGN 378 +VG L+ D + +F L+ + I + R +GFGFV + + AI+ N Sbjct: 11 FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70 Query: 379 GQLIGGRQI 405 GQ + GR I Sbjct: 71 GQDLDGRSI 79
>Q10572:FOX1_CAEEL Sex determination protein fox-1 - Caenorhabditis elegans| Length = 415 Score = 35.4 bits (80), Expect = 0.27 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%) Frame = +1 Query: 136 SGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-- 309 +GS+ + + + D P+ ++V N+ D+ F G S E+ Sbjct: 133 NGSAAVTQPDPSTSSGPDGPK--RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG 190 Query: 310 DKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 KGFGFV ++A +A Q +G +I GR+I+ Sbjct: 191 SKGFGFVTMERPQDAERARQELHGSMIEGRKIE 223
>Q6BLU8:CWC2_DEBHA Pre-mRNA-splicing factor CWC2 - Debaryomyces hansenii (Yeast)| (Torulaspora hansenii) Length = 339 Score = 35.4 bits (80), Expect = 0.27 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQ 384 T+Y+G L D D + H GSI+++RV K FV + T EA A + Q Sbjct: 158 TLYIGGLHMD-DKMENTLTKHFQEFGSIDKIRVLHSKACAFVTFRTENEAQFAKEAMQNQ 216 Query: 385 LIGGRQI 405 + G ++ Sbjct: 217 SLDGNEV 223
>Q7ZWM3:CEL3B_XENLA CUG-BP- and ETR-3-like factor 3-B - Xenopus laevis (African clawed| frog) Length = 462 Score = 35.4 bits (80), Expect = 0.27 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-----DKGFGFVRYSTHEEAAQAIQT 372 ++VG L DV R F G +I+E V R KG FV++ TH EA AI Sbjct: 97 LFVGMLGKQQTDEDVRRMFETFG--NIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINA 154 Query: 373 GNG 381 +G Sbjct: 155 LHG 157 Score = 32.7 bits (73), Expect = 1.8 Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Frame = +1 Query: 187 DNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEVRVTRDKGFGFVRYSTHEEA 354 + P+ +++ +L + +++ + F +++ A + + K FGFV + A Sbjct: 372 EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSA 431 Query: 355 AQAIQTGNGQLIGGRQIK 408 AIQ+ NG IG +++K Sbjct: 432 QAAIQSMNGFQIGMKRLK 449
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 35.0 bits (79), Expect = 0.36 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQA 363 T +YV NL I +++ + F G +I + + RDK G FVR++ EEA +A Sbjct: 188 TNLYVTNLPRTITDDELEKIFGKYG--NIVQKNILRDKLTGRPRGVAFVRFNKREEAQEA 245 Query: 364 IQTGNGQLIGG 396 I N + G Sbjct: 246 ISALNNVIPEG 256
>Q8BL97:SFRS7_MOUSE Splicing factor, arginine/serine-rich 7 - Mus musculus (Mouse)| Length = 267 Score = 35.0 bits (79), Expect = 0.36 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-KGFGFVRYSTHEEAAQAIQTGN 378 T VYVGNL ++ R F G + V + R+ GF FV + +A A++ + Sbjct: 40 TKVYVGNLGTGAGKGELERAFSYY--GPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 97 Query: 379 GQLIGGRQIK 408 G++I G +++ Sbjct: 98 GKVICGSRVR 107
>Q16629:SFRS7_HUMAN Splicing factor, arginine/serine-rich 7 - Homo sapiens (Human)| Length = 238 Score = 35.0 bits (79), Expect = 0.36 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-KGFGFVRYSTHEEAAQAIQTGN 378 T VYVGNL ++ R F G + V + R+ GF FV + +A A++ + Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYY--GPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68 Query: 379 GQLIGGRQIK 408 G++I G +++ Sbjct: 69 GKVICGSRVR 78
>Q3T106:SFRS7_BOVIN Splicing factor, arginine/serine-rich 7 - Bos taurus (Bovine)| Length = 235 Score = 35.0 bits (79), Expect = 0.36 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD-KGFGFVRYSTHEEAAQAIQTGN 378 T VYVGNL ++ R F G + V + R+ GF FV + +A A++ + Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYY--GPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68 Query: 379 GQLIGGRQIK 408 G++I G +++ Sbjct: 69 GKVICGSRVR 78
>O13741:NOP12_SCHPO Nucleolar protein 12 - Schizosaccharomyces pombe (Fission yeast)| Length = 438 Score = 35.0 bits (79), Expect = 0.36 Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYST 342 P+D + V+VGNL+ + + + R+F GSI+ VR+ RD KGF ++++ Sbjct: 265 PQDTKR--CVFVGNLAFEAEEEPLWRYFG--DCGSIDYVRIVRDPKTNLGKGFAYIQFKD 320 Query: 343 HEEAAQAIQTGNGQLIGGRQIK 408 +A+ ++ GR ++ Sbjct: 321 TMGVDKALLLNEKKMPEGRTLR 342
>Q6BTS9:NOP12_DEBHA Nucleolar protein 12 - Debaryomyces hansenii (Yeast) (Torulaspora| hansenii) Length = 462 Score = 35.0 bits (79), Expect = 0.36 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRY 336 P+DN + T++VGNL + + R+F+ +E VRV RD KGF V++ Sbjct: 261 PKDNKR--TIFVGNLDFEEKEETLWRYFNSKTDNDVESVRVIRDAKTNVGKGFALVQF 316
>Q5AHI7:NOP12_CANAL Nucleolar protein 12 - Candida albicans (Yeast)| Length = 454 Score = 35.0 bits (79), Expect = 0.36 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Frame = +1 Query: 160 ENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRD------KGF 321 ++ + P+DN + T++VGNL + + ++F+ +E VR+ RD KGF Sbjct: 253 DHVSHPAPKDNKR--TIFVGNLDFEEKEETLWKYFNSKLDQDVESVRIIRDSKTNLGKGF 310 Query: 322 GFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 V++ +A+ + L G Q K Sbjct: 311 ALVQFKDTLSVNKALLLNDKPLETGTQKK 339
>Q9UT83:MUG28_SCHPO Meiotically up-regulated gene 28 protein - Schizosaccharomyces| pombe (Fission yeast) Length = 609 Score = 35.0 bits (79), Expect = 0.36 Identities = 17/38 (44%), Positives = 24/38 (63%) Frame = +1 Query: 313 KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSK 426 KG+GFV +S EA QAI T NG L G +++ ++ K Sbjct: 462 KGYGFVSFSHPFEAVQAINTLNGVLFGKKRLFVNYAEK 499 Score = 31.2 bits (69), Expect = 5.2 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 9/80 (11%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRF---------FHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAA 357 ++YVGNL S+D+H FH+L + F F+ + A Sbjct: 21 SIYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFITFENKCSAD 80 Query: 358 QAIQTGNGQLIGGRQIKCSW 417 AI + NG G +K + Sbjct: 81 NAIASLNGSSFQGNTLKVEY 100
>O13620:MRD1_SCHPO Multiple RNA-binding domain-containing protein 1 -| Schizosaccharomyces pombe (Fission yeast) Length = 833 Score = 35.0 bits (79), Expect = 0.36 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 8/101 (7%) Frame = +1 Query: 145 SEAGKENANEDGPEDN--PQYTTVYVGNLSHDIDSNDVHRFFHLLGA-GSIEEVRVTRD- 312 S G + A E +D+ P+ T + + NL + DV LLGA G + VRV + Sbjct: 700 SHQGVDAAAEVRKQDSSKPKGTKILIKNLPFEATKKDVQS---LLGAYGQLRSVRVPKKF 756 Query: 313 ----KGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGS 423 +GF F + T EAA A++ + GR + + S Sbjct: 757 DRSARGFAFAEFVTAREAANAMRALKNTHLLGRHLVLQYAS 797
>P10979:GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein - Zea| mays (Maize) Length = 157 Score = 35.0 bits (79), Expect = 0.36 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Frame = +1 Query: 211 YVGNLSHDIDSNDVHRFF----HLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGN 378 +VG L+ + + F +L + I + R +GFGFV +S+ AI+ N Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70 Query: 379 GQLIGGRQI 405 G+ + GR I Sbjct: 71 GKELDGRNI 79
>Q99070:GRP2_SORBI Glycine-rich RNA-binding protein 2 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 168 Score = 35.0 bits (79), Expect = 0.36 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Frame = +1 Query: 211 YVGNLSHDIDSNDVHRFF----HLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGN 378 +VG L+ ++ + + F ++ + I + R +GFGFV +S+ + AI+ N Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMN 70 Query: 379 GQLIGGRQI 405 G+ + GR I Sbjct: 71 GKELDGRNI 79
>Q9SVM8:GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 158 Score = 35.0 bits (79), Expect = 0.36 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Frame = +1 Query: 202 TTVYVGNLSHDIDSNDVHRFFHLLG----AGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQ 369 T +++G LS D + F G A I + R +GFGFV ++ A AI Sbjct: 35 TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94 Query: 370 TGNGQLIGGRQIK 408 +G+ + GR I+ Sbjct: 95 EMDGKELNGRHIR 107
>Q9YGW7:DAZL_DANRE Deleted in azoospermia-like - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 229 Score = 35.0 bits (79), Expect = 0.36 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Frame = +1 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-----DKGFGFVRYS 339 PE T++VG + +D N++ FF GS++EV++ KG+GFV +S Sbjct: 40 PEGKMTPNTLFVGGIDMKVDENEIREFF--AKYGSVKEVKIITYRGGICKGYGFVYFS 95
>Q8CIN6:CELF3_MOUSE CUG-BP- and ETR-3-like factor 3 - Mus musculus (Mouse)| Length = 465 Score = 35.0 bits (79), Expect = 0.36 Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEVRVTRDKGFG 324 ++ + + P +++ +L + +++ + F H++ A + + K FG Sbjct: 365 QQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFG 424 Query: 325 FVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 FV + A AIQ NG IG +++K Sbjct: 425 FVSFDNPASAQAAIQAMNGFQIGMKRLK 452 Score = 34.3 bits (77), Expect = 0.61 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-----DKGFGFVRYSTHEEAAQAIQT 372 ++VG L DV + F G +I+E V R KG FV++ TH EA AI T Sbjct: 96 LFVGMLGKQQTDEDVRKMFEPFG--TIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINT 153
>Q5SZQ8:CELF3_HUMAN CUG-BP- and ETR-3-like factor 3 - Homo sapiens (Human)| Length = 465 Score = 35.0 bits (79), Expect = 0.36 Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEVRVTRDKGFG 324 ++ + + P +++ +L + +++ + F H++ A + + K FG Sbjct: 365 QQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFG 424 Query: 325 FVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 FV + A AIQ NG IG +++K Sbjct: 425 FVSFDNPASAQAAIQAMNGFQIGMKRLK 452 Score = 34.3 bits (77), Expect = 0.61 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-----DKGFGFVRYSTHEEAAQAIQT 372 ++VG L DV + F G +I+E V R KG FV++ TH EA AI T Sbjct: 97 LFVGMLGKQQTDEDVRKMFEPFG--TIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINT 154
>Q08E07:CELF3_BOVIN CUG-BP- and ETR-3-like factor 3 - Bos taurus (Bovine)| Length = 461 Score = 35.0 bits (79), Expect = 0.36 Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = +1 Query: 157 KENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEVRVTRDKGFG 324 ++ + + P +++ +L + +++ + F H++ A + + K FG Sbjct: 361 QQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFG 420 Query: 325 FVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 FV + A AIQ NG IG +++K Sbjct: 421 FVSFDNPASAQAAIQAMNGFQIGMKRLK 448 Score = 34.3 bits (77), Expect = 0.61 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-----DKGFGFVRYSTHEEAAQAIQT 372 ++VG L DV + F G +I+E V R KG FV++ TH EA AI T Sbjct: 97 LFVGMLGKQQTDEDVRKMFEPFG--TIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINT 154
>A4IIM2:CELF2_XENTR CUG-BP- and ETR-3-like factor 2 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 513 Score = 35.0 bits (79), Expect = 0.36 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Frame = +1 Query: 130 LISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEV 297 L+ S AG + ++ P+ +++ +L + D+ + F +++ A + Sbjct: 411 LLQQQSAAGSQ-------KEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDK 463 Query: 298 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 + K FGFV Y A AIQ NG IG +++K Sbjct: 464 QTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK 500
>Q7ZXE2:CELF2_XENLA CUG-BP- and ETR-3-like factor 2 - Xenopus laevis (African clawed| frog) Length = 536 Score = 35.0 bits (79), Expect = 0.36 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Frame = +1 Query: 130 LISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEV 297 L+ S AG + ++ P+ +++ +L + D+ + F +++ A + Sbjct: 434 LLQQQSAAGSQ-------KEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDK 486 Query: 298 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 + K FGFV Y A AIQ NG IG +++K Sbjct: 487 QTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK 523
>Q792H5:CELF2_RAT CUG-BP- and ETR-3-like factor 2 - Rattus norvegicus (Rat)| Length = 508 Score = 35.0 bits (79), Expect = 0.36 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Frame = +1 Query: 130 LISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEV 297 L+ S AG + ++ P+ +++ +L + D+ + F +++ A + Sbjct: 406 LLQQQSAAGSQ-------KEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDK 458 Query: 298 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 + K FGFV Y A AIQ NG IG +++K Sbjct: 459 QTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK 495
>Q5R8Y8:CELF2_PONPY CUG-BP- and ETR-3-like factor 2 - Pongo pygmaeus (Orangutan)| Length = 508 Score = 35.0 bits (79), Expect = 0.36 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Frame = +1 Query: 130 LISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEV 297 L+ S AG + ++ P+ +++ +L + D+ + F +++ A + Sbjct: 406 LLQQQSAAGSQ-------KEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDK 458 Query: 298 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 + K FGFV Y A AIQ NG IG +++K Sbjct: 459 QTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK 495
>Q9Z0H4:CELF2_MOUSE CUG-BP- and ETR-3-like factor 2 - Mus musculus (Mouse)| Length = 508 Score = 35.0 bits (79), Expect = 0.36 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Frame = +1 Query: 130 LISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEV 297 L+ S AG + ++ P+ +++ +L + D+ + F +++ A + Sbjct: 406 LLQQQSAAGSQ-------KEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDK 458 Query: 298 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 + K FGFV Y A AIQ NG IG +++K Sbjct: 459 QTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK 495
>O95319:CELF2_HUMAN CUG-BP- and ETR-3-like factor 2 - Homo sapiens (Human)| Length = 508 Score = 35.0 bits (79), Expect = 0.36 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Frame = +1 Query: 130 LISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEV 297 L+ S AG + ++ P+ +++ +L + D+ + F +++ A + Sbjct: 406 LLQQQSAAGSQ-------KEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDK 458 Query: 298 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 + K FGFV Y A AIQ NG IG +++K Sbjct: 459 QTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK 495
>Q7T2T1:CELF2_CHICK CUG-BP- and ETR-3-like factor 2 - Gallus gallus (Chicken)| Length = 484 Score = 35.0 bits (79), Expect = 0.36 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Frame = +1 Query: 130 LISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEV 297 L+ S AG + ++ P+ +++ +L + D+ + F +++ A + Sbjct: 382 LLQQQSAAGSQ-------KEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDK 434 Query: 298 RVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 + K FGFV Y A AIQ NG IG +++K Sbjct: 435 QTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK 471
>O01671:SXL_MEGSC Sex-lethal homolog - Megaselia scalaris| Length = 321 Score = 34.7 bits (78), Expect = 0.47 Identities = 36/138 (26%), Positives = 52/138 (37%), Gaps = 6/138 (4%) Frame = +1 Query: 1 AQTAINELNGKWLGNRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDG 180 A AIN LNG + N++I+ ++A G +Q D Sbjct: 132 ALRAINNLNGITVRNKRIKVSFARPGG-----EQLRD----------------------- 163 Query: 181 PEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYST 342 T +YV NLS I + F G I + + RDK G F+R++ Sbjct: 164 -------TNLYVTNLSRSITDEQLETIFGKYG--QIVQKNILRDKHTGTPRGVAFIRFNK 214 Query: 343 HEEAAQAIQTGNGQLIGG 396 EEA +AI N + G Sbjct: 215 REEAQEAISALNNVIPEG 232
>Q7SXP4:SF1L1_DANRE Splicing factor, arginine/serine-rich 1-like protein 1 - Danio| rerio (Zebrafish) (Brachydanio rerio) Length = 245 Score = 34.7 bits (78), Expect = 0.47 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG---FGFVRYSTHEEAAQAIQTGN 378 +YVGNL DI + DV F+ GA I ++ + +G F FV + +A A+ + Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGA--IRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARD 74 Query: 379 GQLIGGRQIK 408 G G +++ Sbjct: 75 GYDYDGYRLR 84
>Q9BYG3:MK67I_HUMAN MKI67 FHA domain-interacting nucleolar phosphoprotein - Homo| sapiens (Human) Length = 293 Score = 34.7 bits (78), Expect = 0.47 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 VYV +L + +D + +F G ++ R++R K G+ FV + + + A + Sbjct: 47 VYVRHLPNLLDETQIFSYFSQFG--TVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAE 104 Query: 370 TGNGQLIGGRQIKC 411 T N L G R ++C Sbjct: 105 TMNNYLFGERLLEC 118
>Q29RT0:HNRPG_BOVIN Heterogeneous nuclear ribonucleoprotein G - Bos taurus (Bovine)| Length = 396 Score = 34.7 bits (78), Expect = 0.47 Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 6/79 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDK------GFGFVRYSTHEEAAQAIQ 369 +++G L+ + D + F G I EV + +D+ GF F+ + + +A A++ Sbjct: 10 LFIGGLNLETDEKSLEATFGKYGR--ISEVLLMKDRETNKSRGFAFITFESPADAKAAVR 67 Query: 370 TGNGQLIGGRQIKCSWGSK 426 NG+ + G+ IK + +K Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>Q03251:GRP8_ARATH Glycine-rich RNA-binding protein 8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 169 Score = 34.7 bits (78), Expect = 0.47 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Frame = +1 Query: 211 YVGNLSHDIDSNDVHRFFHLLG----AGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGN 378 +VG L+ + D+ R F G + I + R +GFGFV + + AI+ N Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68 Query: 379 GQLIGGRQI 405 G+ + GR I Sbjct: 69 GKELDGRVI 77
>Q6P0B1:CELF2_DANRE CUG-BP- and ETR-3-like factor 2 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 514 Score = 34.7 bits (78), Expect = 0.47 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 6/99 (6%) Frame = +1 Query: 130 LISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR 309 L+ S AG + ++ P+ +++ +L + D+ + F + G++ +V Sbjct: 412 LLQQQSAAGSQ-------KEGPEGANLFIYHLPQEFGDQDILQMF--MPFGNVVSAKVFI 462 Query: 310 DKG------FGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 DK FGFV Y A AIQ NG IG +++K Sbjct: 463 DKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK 501
>Q91579:CEL3A_XENLA CUG-BP- and ETR-3-like factor 3-A - Xenopus laevis (African clawed| frog) Length = 462 Score = 34.7 bits (78), Expect = 0.47 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Frame = +1 Query: 208 VYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTR-----DKGFGFVRYSTHEEAAQAIQT 372 ++VG L DV R F G +I+E V R KG FV++ TH EA AI Sbjct: 97 LFVGMLGKQQTDEDVRRMFEPFG--NIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINA 154 Query: 373 GNG 381 +G Sbjct: 155 LHG 157 Score = 32.3 bits (72), Expect = 2.3 Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%) Frame = +1 Query: 187 DNPQYTTVYVGNLSHDIDSNDVHRFF----HLLGAGSIEEVRVTRDKGFGFVRYSTHEEA 354 + P+ +++ +L + +++ + F +++ A + + K FGFV + A Sbjct: 372 EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSA 431 Query: 355 AQAIQTGNGQLIGGRQIK 408 AIQ NG IG +++K Sbjct: 432 QAAIQAMNGFQIGMKRLK 449
>Q9JJ43:A2BP1_MOUSE Ataxin-2-binding protein 1 - Mus musculus (Mouse)| Length = 396 Score = 34.7 bits (78), Expect = 0.47 Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%) Frame = +1 Query: 97 KQSTDSKGMVELISGSSEAGKENANEDG-PEDNPQYTT--------VYVGNLSHDIDSND 249 +QS D+ + +SG++ + A DG P+ P T ++V N+ D Sbjct: 74 EQSADTSA--QTVSGTATQTDDAAPTDGQPQTQPSENTESKSQPKRLHVSNIPFRFRDPD 131 Query: 250 VHRFFHLLGAGSIEEVRVTR--DKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIK 408 + + F G E+ KGFGFV + +A +A + +G ++ GR+I+ Sbjct: 132 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIE 186
>P38741:YHC4_YEAST Uncharacterized RNA-binding protein YHL024W - Saccharomyces| cerevisiae (Baker's yeast) Length = 713 Score = 34.3 bits (77), Expect = 0.61 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Frame = +1 Query: 280 GSIEEVRVTRDKG---FGFVRYSTHEEAAQAIQTGNGQLIGGRQIKC 411 G + V+V RD + FV+Y+ +A A+ G L+ GR+++C Sbjct: 121 GDLARVKVLRDNANRPYAFVQYNNDHDAKHALIRAQGTLLNGRRLRC 167
>Q6NYA0:SFRS1_DANRE Splicing factor, arginine/serine-rich 1 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 245 Score = 34.3 bits (77), Expect = 0.61 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Frame = +1 Query: 178 GPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG---FGFVRYSTHE 348 GP N +YVGNL DI + DV F+ GA I ++ + +G F FV + Sbjct: 8 GPAGNND-CRIYVGNLPPDIRTKDVEDVFYKYGA--IRDIDLKNRRGGPPFAFVEFEDPR 64 Query: 349 EAAQAIQTGNGQLIGGRQIK 408 +A A+ +G G +++ Sbjct: 65 DAEDAVYGRDGYDYDGYRLR 84
>P04256:ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 - Rattus norvegicus| (Rat) Length = 320 Score = 34.3 bits (77), Expect = 0.61 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%) Frame = +1 Query: 166 ANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGS----IEEVRVTRDKGFGFVR 333 + + P++ Q +++G LS + + F G + + + R +GFGFV Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVT 61 Query: 334 YSTHEEAAQAI 366 Y+T EE A+ Sbjct: 62 YATVEEVDAAM 72
>P49312:ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 - Mus musculus (Mouse)| Length = 320 Score = 34.3 bits (77), Expect = 0.61 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%) Frame = +1 Query: 166 ANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGS----IEEVRVTRDKGFGFVR 333 + + P++ Q +++G LS + + F G + + + R +GFGFV Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVT 61 Query: 334 YSTHEEAAQAI 366 Y+T EE A+ Sbjct: 62 YATVEEVDAAM 72
>P09651:ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 - Homo sapiens (Human)| Length = 372 Score = 34.3 bits (77), Expect = 0.61 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%) Frame = +1 Query: 166 ANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGS----IEEVRVTRDKGFGFVR 333 + + P++ Q +++G LS + + F G + + + R +GFGFV Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVT 61 Query: 334 YSTHEEAAQAI 366 Y+T EE A+ Sbjct: 62 YATVEEVDAAM 72
>P09867:ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 - Bos taurus (Bovine)| Length = 195 Score = 34.3 bits (77), Expect = 0.61 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%) Frame = +1 Query: 166 ANEDGPEDNPQYTTVYVGNLSHDIDSNDVHRFFHLLGAGS----IEEVRVTRDKGFGFVR 333 + + P++ Q +++G LS + + F G + + + R +GFGFV Sbjct: 1 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVT 60 Query: 334 YSTHEEAAQAI 366 Y+T EE A+ Sbjct: 61 YATVEEVDAAM 71
>Q9CQT2:RBM7_MOUSE RNA-binding protein 7 - Mus musculus (Mouse)| Length = 265 Score = 34.3 bits (77), Expect = 0.61 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG-----FGFVRYSTHEEAAQAIQ 369 T++VGNL + + FH AG + +V++ +DK F FV + A+ Sbjct: 11 TLFVGNLETKVTEELLFELFH--QAGPVIKVKIPKDKDGKLKQFAFVNFKHEVSVPYAMN 68 Query: 370 TGNGQLIGGRQIKCSWGS 423 NG + GR IK + S Sbjct: 69 LLNGIKLFGRPIKIQFRS 86
>Q9Y580:RBM7_HUMAN RNA-binding protein 7 - Homo sapiens (Human)| Length = 266 Score = 34.3 bits (77), Expect = 0.61 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = +1 Query: 205 TVYVGNLSHDIDSNDVHRFFHLLGAGSIEEVRVTRDKG-----FGFVRYSTHEEAAQAIQ 369 T++VGNL + + FH AG + +V++ +DK F FV + A+ Sbjct: 11 TLFVGNLETKVTEELLFELFH--QAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMN 68 Query: 370 TGNGQLIGGRQIKCSWGS 423 NG + GR IK + S Sbjct: 69 LLNGIKLYGRPIKIQFRS 86 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 158,099,892 Number of extensions: 3856643 Number of successful extensions: 10539 Number of sequences better than 10.0: 373 Number of HSP's gapped: 10463 Number of HSP's successfully gapped: 485 Length of query: 275 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 163 Effective length of database: 69,965,399 Effective search space: 11404360037 Effective search space used: 11404360037 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
