| Clone Name | FLbaf41e05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100320:Os12g0407500 | 804 | 0.0 | 2 | AK062213:Os12g0407500 | 380 | e-105 | 3 | AK064410:Os12g0407200 | 149 | 1e-35 | 4 | AK064452:Os12g0407200 | 82 | 4e-15 | 5 | Os06g0184400:Os06g0184400 | 42 | 0.002 | 6 | Os02g0794900:Os02g0794900 | 41 | 0.005 | 7 | Os03g0691200:Os03g0691200 | 36 | 0.23 | 8 | Os06g0148800:Os06g0148800 | 35 | 0.39 | 9 | AK071990:Os05g0524200 | 33 | 1.9 | 10 | Os10g0462700:Os10g0462700 | 32 | 2.5 | 11 | Os01g0906400:Os01g0906400 | 32 | 2.5 | 12 | AK060606:Os09g0408600 | 32 | 3.3 | 13 | AK107278: | 31 | 5.6 | 14 | AK073172:Os01g0739200 | 31 | 5.6 | 15 | AB064519:Os12g0572000 | 31 | 7.3 | 16 | Os05g0119100:Os05g0119100 | 30 | 9.5 |
|---|
>AK100320:Os12g0407500 | Length = 658 Score = 804 bits (2077), Expect = 0.0 Identities = 397/473 (83%), Positives = 409/473 (86%), Gaps = 2/473 (0%) Frame = +1 Query: 223 MEQQQVKPS--LPPSDTPMDNQDSSXXXXXXXXXXXXXXXXNDSATQVXXXXXXXXXXXX 396 ME+QQVKPS PP TP+D+QDS+ NDSATQ Sbjct: 1 MEEQQVKPSDSHPPPATPVDSQDSTAPPVRTPDPVSQATS-NDSATQFASTVHVAPSPAP 59 Query: 397 XXXXXXXXXXXGRETPSSMFSTSGLSSWAKNLKIPQPSSGQESPTGKNTVXXXXXXXXXX 576 GRE SS+FSTSGLSSWAKNLKIPQPSSGQESPTGKNT Sbjct: 60 VPNAVPIQDAAGREAQSSIFSTSGLSSWAKNLKIPQPSSGQESPTGKNTFSRLTSGLGLR 119 Query: 577 XXPKDPQQDETAEGSTTPTTAQAGVFGSLTRGIVDSSKNAVKAVQVKARHMVSQNKRRYQ 756 PK PQQDE+AEGSTTPTTAQ+GVFGS T+GIVDSSKNAVKAVQVKARHMVSQNKRRYQ Sbjct: 120 LSPKGPQQDESAEGSTTPTTAQSGVFGSFTKGIVDSSKNAVKAVQVKARHMVSQNKRRYQ 179 Query: 757 EGGFDLDMTYITENIIAMGFPAGDLSSGIFGYFEGFYRNHMEEVIRFFEMHHKGKYKVYN 936 EGGFDLDMTYITENIIAMGFPAGDLSSG+FGYFEGFYRNHMEEVIRFFEMHHKGKYKVYN Sbjct: 180 EGGFDLDMTYITENIIAMGFPAGDLSSGLFGYFEGFYRNHMEEVIRFFEMHHKGKYKVYN 239 Query: 937 LCSERLYDASLFEGKVACFPFDDHNCPPIQLVISFCQSAYSWLKEDIENVVVVHCKAGKA 1116 LCSERLYDASLFEGKVACFPFDDHNCPPIQLVISFC SAYSWLKEDIENVVVVHCKAGKA Sbjct: 240 LCSERLYDASLFEGKVACFPFDDHNCPPIQLVISFCHSAYSWLKEDIENVVVVHCKAGKA 299 Query: 1117 RTGLMISSLLVYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERILTYFNGEN 1296 RTGLMISSLL+YLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERILTYFNGEN Sbjct: 300 RTGLMISSLLLYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERILTYFNGEN 359 Query: 1297 QPPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLFSTKKHPRTKELMPEDFWFTAPKKGIM 1476 QPPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLF+TKKHPRTKELMPEDFWF+APKKGIM Sbjct: 360 QPPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLFTTKKHPRTKELMPEDFWFSAPKKGIM 419 Query: 1477 VFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTDFDDFDK 1635 VFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTD DDFDK Sbjct: 420 VFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTDLDDFDK 472
>AK062213:Os12g0407500 | Length = 366 Score = 380 bits (975), Expect = e-105 Identities = 176/180 (97%), Positives = 179/180 (99%) Frame = +1 Query: 1096 HCKAGKARTGLMISSLLVYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERIL 1275 HCKAGKARTGLMISSLL+YLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERIL Sbjct: 1 HCKAGKARTGLMISSLLLYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERIL 60 Query: 1276 TYFNGENQPPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLFSTKKHPRTKELMPEDFWFT 1455 TYFNGENQPPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLF+TKKHPRTKELMPEDFWF+ Sbjct: 61 TYFNGENQPPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLFTTKKHPRTKELMPEDFWFS 120 Query: 1456 APKKGIMVFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTDFDDFDK 1635 APKKGIMVFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTD DDFDK Sbjct: 121 APKKGIMVFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTDLDDFDK 180
>AK064410:Os12g0407200 | Length = 112 Score = 149 bits (376), Expect = 1e-35 Identities = 68/72 (94%), Positives = 69/72 (95%) Frame = +1 Query: 1435 PEDFWFTAPKKGIMVFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPT 1614 PEDFWF+APKKGIMVFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPT Sbjct: 13 PEDFWFSAPKKGIMVFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPT 72 Query: 1615 DFDDFDKVTDAS 1650 D DDFDKV AS Sbjct: 73 DLDDFDKVIVAS 84
>AK064452:Os12g0407200 | Length = 104 Score = 81.6 bits (200), Expect = 4e-15 Identities = 55/126 (43%), Positives = 61/126 (48%), Gaps = 2/126 (1%) Frame = +1 Query: 223 MEQQQVKPS--LPPSDTPMDNQDSSXXXXXXXXXXXXXXXXNDSATQVXXXXXXXXXXXX 396 M +QQVKPS PP TP+D+QDS+ D +Q Sbjct: 1 MVEQQVKPSDSHPPPATPVDSQDSTAPPVRTP----------DPVSQATSNAVPIQDAA- 49 Query: 397 XXXXXXXXXXXGRETPSSMFSTSGLSSWAKNLKIPQPSSGQESPTGKNTVXXXXXXXXXX 576 GRE SS+FSTSGLSSWAKNLKIPQPSSGQESPTGKNT Sbjct: 50 -----------GREAQSSIFSTSGLSSWAKNLKIPQPSSGQESPTGKNTFSRLTSGLGLR 98 Query: 577 XXPKDP 594 PK P Sbjct: 99 LSPKAP 104
>Os06g0184400:Os06g0184400 | Length = 552 Score = 42.4 bits (98), Expect = 0.002 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 12/129 (9%) Frame = +1 Query: 970 FEGKVACFPFDDHNCP--PIQLVISFCQSAYSWLKEDIENVVVVHC-KAGKARTGLMISS 1140 F+ V +P + CP ++++ F +S+ SWL +N +++H + G +++ Sbjct: 81 FDMSVMGYPRNYEGCPLLTMEMIHHFVRSSESWLSLGQDNFLLIHSEQGGWPVLAFALAA 140 Query: 1141 LLVYLKFFPTAEESIE-YYNQKRCVDGKGLI--------LPSQIRYVKYFERILTYFNGE 1293 LL+YL+ + +++E Y Q GL+ PSQ+RY+KY R + + E Sbjct: 141 LLLYLRRYNNERKALEMVYKQA----PPGLVEHFSPLNPAPSQMRYLKYVSR--RHMSPE 194 Query: 1294 NQPPRRCML 1320 PP M+ Sbjct: 195 QWPPADRMI 203
>Os02g0794900:Os02g0794900 | Length = 1357 Score = 41.2 bits (95), Expect = 0.005 Identities = 28/119 (23%), Positives = 62/119 (52%), Gaps = 8/119 (6%) Frame = +1 Query: 928 VYNLCSERLYDASLFEGKVACFPFDDHNCPPIQLVISFC--QSAYSWLKEDIENVVVVHC 1101 +Y++ SE Y ++ + +P CP + + + C +S+ SWL N +++HC Sbjct: 65 IYHILSE--YGMTVLD-----YPGHYEGCPLLTMEMVHCILKSSESWLSLGQRNFLIMHC 117 Query: 1102 KAG-KARTGLMISSLLVYLKFFPTAEESIEYYNQKRCVDGKGLI-----LPSQIRYVKY 1260 + G M+++LL+YL + +++++ ++ V+ + +PSQ+RY++Y Sbjct: 118 EQGCWPILAFMLAALLIYLGQYSDEQKTLDMLYKQSPVELLEMFSPLNPMPSQLRYLRY 176
>Os03g0691200:Os03g0691200 | Length = 267 Score = 35.8 bits (81), Expect = 0.23 Identities = 36/136 (26%), Positives = 48/136 (35%), Gaps = 8/136 (5%) Frame = +2 Query: 2834 EMACMTVREDGGEDTGSRGLTSRLDGRHRESRWGEGEEPGGAGLDLPLVAVGDGPGEIRA 3013 E+A R+ GG +G R + R R + G GG AVG G GE R Sbjct: 53 EVAAAAARQGGGGGSGGREASGGAGRRRRRAAVGARTARGGGE-----AAVGCGGGEARR 107 Query: 3014 SEERIG*RRAQL----AGGHRRPGGAIFLVRRLMQXXXXXXXXSMDTGCSPP----PLNP 3169 + G R + AGG G + R ++ + P PL P Sbjct: 108 RPTKDGEGRGAVVGVAAGGSAAEGAQVDRAHRPPLPSLPPRLAAVAASSAAPRRRSPLPP 167 Query: 3170 APKGPHRRQLAFPPPI 3217 P R Q PPP+ Sbjct: 168 PPPRLLREQHELPPPL 183
>Os06g0148800:Os06g0148800 | Length = 397 Score = 35.0 bits (79), Expect = 0.39 Identities = 29/114 (25%), Positives = 49/114 (42%) Frame = +1 Query: 673 IVDSSKNAVKAVQVKARHMVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDLSSGIFGY 852 +++ S +A + A + K +Y + F L IT I A+ + + Sbjct: 107 LMNPSSSATTPLPDLAAVFHGEIKCKYPDTAFQLGQRRITPIIKAV----------VSEH 156 Query: 853 FEGFYRNHMEEVIRFFEMHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNC 1014 F FY N + +I + H K+ + S + D +LF+GK+ C FD NC Sbjct: 157 FIAFYFNSSKVIITSGQPHTVVKWSPPD--SSYILDIALFQGKLYCLTFDIENC 208
>AK071990:Os05g0524200 | Length = 377 Score = 32.7 bits (73), Expect = 1.9 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = +1 Query: 1093 VHCKAGKAR-TGLMISSLLVYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFER 1269 VHCKAG+ R T +++ L+ Y P A + R V + L+ PSQ + VK F Sbjct: 165 VHCKAGRGRSTTIVLCYLIKYRNMTPEAA-----LDHARSVRPRVLLAPSQWQAVKLFSN 219 Query: 1270 ILT 1278 + T Sbjct: 220 LNT 222
>Os10g0462700:Os10g0462700 | Length = 211 Score = 32.3 bits (72), Expect = 2.5 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 8/65 (12%) Frame = +2 Query: 2855 REDGGEDTGSRGLTSRLD------GRHRES--RWGEGEEPGGAGLDLPLVAVGDGPGEIR 3010 R GG G RL G RE RWGEGE G P V + G +I+ Sbjct: 117 RLGGGRRLQKEGAARRLGPWLRRKGAEREGCRRWGEGEGERRRGRASPAVEMRSGGEDIQ 176 Query: 3011 ASEER 3025 AS+ER Sbjct: 177 ASDER 181
>Os01g0906400:Os01g0906400 | Length = 172 Score = 32.3 bits (72), Expect = 2.5 Identities = 29/89 (32%), Positives = 34/89 (38%) Frame = +2 Query: 2948 PGGAGLDLPLVAVGDGPGEIRASEERIG*RRAQLAGGHRRPGGAIFLVRRLMQXXXXXXX 3127 P L PL + G G RA RR+ G R G A+ RR + Sbjct: 53 PPSPPLATPLPGLRSGAGVDRAH------RRSPRPSGETRSGDAV--ARRWSRREP---- 100 Query: 3128 XSMDTGCSPPPLNPAPKGPHRRQLAFPPP 3214 T +PPP P P P R LA PPP Sbjct: 101 ----TPSAPPP-RPTPHRPRRHDLAVPPP 124
>AK060606:Os09g0408600 | Length = 501 Score = 32.0 bits (71), Expect = 3.3 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +2 Query: 3149 SPPPLNPAPKGPHRRQLAFPPP 3214 +PPP P P PHR A PPP Sbjct: 230 APPPPPPPPPSPHRHPAAHPPP 251
>AK107278: | Length = 543 Score = 31.2 bits (69), Expect = 5.6 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 Query: 479 QEDKPDVENMDDGVSRPAASCVVAEVGAEGD 387 ++D D E + ++ PAA C A V AEGD Sbjct: 181 EDDGEDAETSSEAIAAPAALCGAAHVDAEGD 211
>AK073172:Os01g0739200 | Length = 341 Score = 31.2 bits (69), Expect = 5.6 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +1 Query: 1084 VVVVHCKAGKAR-TGLMISSLLVYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKY 1260 + VHCKAG+ R T +++ L+ Y P A + R + + L+ PSQ + V Sbjct: 158 ITYVHCKAGRGRSTTIVLCYLIKYRSMSPEAA-----LDHVRSIRPRVLLAPSQWQAVNV 212 Query: 1261 FERILT 1278 F + T Sbjct: 213 FSTLTT 218
>AB064519:Os12g0572000 | Length = 342 Score = 30.8 bits (68), Expect = 7.3 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 4/87 (4%) Frame = -2 Query: 3154 RTATSVHRWGEGEQQQLHQSANEKDGSARPPMT--TSQLCSASSYSFFARPDFSRTVTNS 2981 RTA + +W E +++ + ++D PP + C+ Y + DF+ + N Sbjct: 96 RTAKRLGKWWEVFKEKQQRELRDRDRRRLPPPLDGDERGCAGGRYDWLLE-DFADKLVND 154 Query: 2980 NKRKV--KPCTSRFLSLTPSALTVPSV 2906 + R++ P ++S +PS+ + PSV Sbjct: 155 HHRRMMAAPILPPWMSSSPSSSSSPSV 181
>Os05g0119100:Os05g0119100 | Length = 280 Score = 30.4 bits (67), Expect = 9.5 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = -2 Query: 1093 QPPHFLCLPSTMSMHFGKMI*QVVSEDSYDRQKESMQPFPQKEMHHTAFL 944 +PPH L L M H M +V E ++ R E +QP P + HT+FL Sbjct: 49 RPPHIL-LRLAMLRHTRVMEVAMVEEGTWLRCLERVQPSPPRRTVHTSFL 97 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 107,060,217 Number of extensions: 2471501 Number of successful extensions: 7725 Number of sequences better than 10.0: 16 Number of HSP's gapped: 7690 Number of HSP's successfully gapped: 16 Length of query: 1235 Length of database: 15,399,855 Length adjustment: 112 Effective length of query: 1123 Effective length of database: 10,915,263 Effective search space: 12257840349 Effective search space used: 12257840349 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)