ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf41e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK100320:Os12g0407500 804 0.0
2AK062213:Os12g0407500 380 e-105
3AK064410:Os12g0407200 149 1e-35
4AK064452:Os12g0407200 82 4e-15
5Os06g0184400:Os06g0184400 42 0.002
6Os02g0794900:Os02g0794900 41 0.005
7Os03g0691200:Os03g0691200 36 0.23
8Os06g0148800:Os06g0148800 35 0.39
9AK071990:Os05g0524200 33 1.9
10Os10g0462700:Os10g0462700 32 2.5
11Os01g0906400:Os01g0906400 32 2.5
12AK060606:Os09g0408600 32 3.3
13AK107278: 31 5.6
14AK073172:Os01g0739200 31 5.6
15AB064519:Os12g0572000 31 7.3
16Os05g0119100:Os05g0119100 30 9.5

>AK100320:Os12g0407500 |
          Length = 658
 Score =  804 bits (2077), Expect = 0.0
 Identities = 397/473 (83%), Positives = 409/473 (86%), Gaps = 2/473 (0%)
 Frame = +1

Query: 223  MEQQQVKPS--LPPSDTPMDNQDSSXXXXXXXXXXXXXXXXNDSATQVXXXXXXXXXXXX 396
            ME+QQVKPS   PP  TP+D+QDS+                NDSATQ             
Sbjct: 1    MEEQQVKPSDSHPPPATPVDSQDSTAPPVRTPDPVSQATS-NDSATQFASTVHVAPSPAP 59

Query: 397  XXXXXXXXXXXGRETPSSMFSTSGLSSWAKNLKIPQPSSGQESPTGKNTVXXXXXXXXXX 576
                       GRE  SS+FSTSGLSSWAKNLKIPQPSSGQESPTGKNT           
Sbjct: 60   VPNAVPIQDAAGREAQSSIFSTSGLSSWAKNLKIPQPSSGQESPTGKNTFSRLTSGLGLR 119

Query: 577  XXPKDPQQDETAEGSTTPTTAQAGVFGSLTRGIVDSSKNAVKAVQVKARHMVSQNKRRYQ 756
              PK PQQDE+AEGSTTPTTAQ+GVFGS T+GIVDSSKNAVKAVQVKARHMVSQNKRRYQ
Sbjct: 120  LSPKGPQQDESAEGSTTPTTAQSGVFGSFTKGIVDSSKNAVKAVQVKARHMVSQNKRRYQ 179

Query: 757  EGGFDLDMTYITENIIAMGFPAGDLSSGIFGYFEGFYRNHMEEVIRFFEMHHKGKYKVYN 936
            EGGFDLDMTYITENIIAMGFPAGDLSSG+FGYFEGFYRNHMEEVIRFFEMHHKGKYKVYN
Sbjct: 180  EGGFDLDMTYITENIIAMGFPAGDLSSGLFGYFEGFYRNHMEEVIRFFEMHHKGKYKVYN 239

Query: 937  LCSERLYDASLFEGKVACFPFDDHNCPPIQLVISFCQSAYSWLKEDIENVVVVHCKAGKA 1116
            LCSERLYDASLFEGKVACFPFDDHNCPPIQLVISFC SAYSWLKEDIENVVVVHCKAGKA
Sbjct: 240  LCSERLYDASLFEGKVACFPFDDHNCPPIQLVISFCHSAYSWLKEDIENVVVVHCKAGKA 299

Query: 1117 RTGLMISSLLVYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERILTYFNGEN 1296
            RTGLMISSLL+YLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERILTYFNGEN
Sbjct: 300  RTGLMISSLLLYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERILTYFNGEN 359

Query: 1297 QPPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLFSTKKHPRTKELMPEDFWFTAPKKGIM 1476
            QPPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLF+TKKHPRTKELMPEDFWF+APKKGIM
Sbjct: 360  QPPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLFTTKKHPRTKELMPEDFWFSAPKKGIM 419

Query: 1477 VFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTDFDDFDK 1635
            VFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTD DDFDK
Sbjct: 420  VFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTDLDDFDK 472



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>AK062213:Os12g0407500 |
          Length = 366

 Score =  380 bits (975), Expect = e-105
 Identities = 176/180 (97%), Positives = 179/180 (99%)
 Frame = +1

Query: 1096 HCKAGKARTGLMISSLLVYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERIL 1275
            HCKAGKARTGLMISSLL+YLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERIL
Sbjct: 1    HCKAGKARTGLMISSLLLYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERIL 60

Query: 1276 TYFNGENQPPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLFSTKKHPRTKELMPEDFWFT 1455
            TYFNGENQPPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLF+TKKHPRTKELMPEDFWF+
Sbjct: 61   TYFNGENQPPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLFTTKKHPRTKELMPEDFWFS 120

Query: 1456 APKKGIMVFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTDFDDFDK 1635
            APKKGIMVFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTD DDFDK
Sbjct: 121  APKKGIMVFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTDLDDFDK 180



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>AK064410:Os12g0407200 |
          Length = 112

 Score =  149 bits (376), Expect = 1e-35
 Identities = 68/72 (94%), Positives = 69/72 (95%)
 Frame = +1

Query: 1435 PEDFWFTAPKKGIMVFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPT 1614
            PEDFWF+APKKGIMVFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPT
Sbjct: 13   PEDFWFSAPKKGIMVFALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPT 72

Query: 1615 DFDDFDKVTDAS 1650
            D DDFDKV  AS
Sbjct: 73   DLDDFDKVIVAS 84



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>AK064452:Os12g0407200 |
          Length = 104

 Score = 81.6 bits (200), Expect = 4e-15
 Identities = 55/126 (43%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
 Frame = +1

Query: 223 MEQQQVKPS--LPPSDTPMDNQDSSXXXXXXXXXXXXXXXXNDSATQVXXXXXXXXXXXX 396
           M +QQVKPS   PP  TP+D+QDS+                 D  +Q             
Sbjct: 1   MVEQQVKPSDSHPPPATPVDSQDSTAPPVRTP----------DPVSQATSNAVPIQDAA- 49

Query: 397 XXXXXXXXXXXGRETPSSMFSTSGLSSWAKNLKIPQPSSGQESPTGKNTVXXXXXXXXXX 576
                      GRE  SS+FSTSGLSSWAKNLKIPQPSSGQESPTGKNT           
Sbjct: 50  -----------GREAQSSIFSTSGLSSWAKNLKIPQPSSGQESPTGKNTFSRLTSGLGLR 98

Query: 577 XXPKDP 594
             PK P
Sbjct: 99  LSPKAP 104



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>Os06g0184400:Os06g0184400 |
          Length = 552

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
 Frame = +1

Query: 970  FEGKVACFPFDDHNCP--PIQLVISFCQSAYSWLKEDIENVVVVHC-KAGKARTGLMISS 1140
            F+  V  +P +   CP   ++++  F +S+ SWL    +N +++H  + G       +++
Sbjct: 81   FDMSVMGYPRNYEGCPLLTMEMIHHFVRSSESWLSLGQDNFLLIHSEQGGWPVLAFALAA 140

Query: 1141 LLVYLKFFPTAEESIE-YYNQKRCVDGKGLI--------LPSQIRYVKYFERILTYFNGE 1293
            LL+YL+ +    +++E  Y Q       GL+         PSQ+RY+KY  R   + + E
Sbjct: 141  LLLYLRRYNNERKALEMVYKQA----PPGLVEHFSPLNPAPSQMRYLKYVSR--RHMSPE 194

Query: 1294 NQPPRRCML 1320
              PP   M+
Sbjct: 195  QWPPADRMI 203



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>Os02g0794900:Os02g0794900 |
          Length = 1357

 Score = 41.2 bits (95), Expect = 0.005
 Identities = 28/119 (23%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
 Frame = +1

Query: 928  VYNLCSERLYDASLFEGKVACFPFDDHNCPPIQLVISFC--QSAYSWLKEDIENVVVVHC 1101
            +Y++ SE  Y  ++ +     +P     CP + + +  C  +S+ SWL     N +++HC
Sbjct: 65   IYHILSE--YGMTVLD-----YPGHYEGCPLLTMEMVHCILKSSESWLSLGQRNFLIMHC 117

Query: 1102 KAG-KARTGLMISSLLVYLKFFPTAEESIEYYNQKRCVDGKGLI-----LPSQIRYVKY 1260
            + G       M+++LL+YL  +   +++++   ++  V+   +      +PSQ+RY++Y
Sbjct: 118  EQGCWPILAFMLAALLIYLGQYSDEQKTLDMLYKQSPVELLEMFSPLNPMPSQLRYLRY 176



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>Os03g0691200:Os03g0691200 |
          Length = 267

 Score = 35.8 bits (81), Expect = 0.23
 Identities = 36/136 (26%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
 Frame = +2

Query: 2834 EMACMTVREDGGEDTGSRGLTSRLDGRHRESRWGEGEEPGGAGLDLPLVAVGDGPGEIRA 3013
            E+A    R+ GG  +G R  +     R R +  G     GG        AVG G GE R 
Sbjct: 53   EVAAAAARQGGGGGSGGREASGGAGRRRRRAAVGARTARGGGE-----AAVGCGGGEARR 107

Query: 3014 SEERIG*RRAQL----AGGHRRPGGAIFLVRRLMQXXXXXXXXSMDTGCSPP----PLNP 3169
               + G  R  +    AGG    G  +    R           ++    + P    PL P
Sbjct: 108  RPTKDGEGRGAVVGVAAGGSAAEGAQVDRAHRPPLPSLPPRLAAVAASSAAPRRRSPLPP 167

Query: 3170 APKGPHRRQLAFPPPI 3217
             P    R Q   PPP+
Sbjct: 168  PPPRLLREQHELPPPL 183



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>Os06g0148800:Os06g0148800 |
          Length = 397

 Score = 35.0 bits (79), Expect = 0.39
 Identities = 29/114 (25%), Positives = 49/114 (42%)
 Frame = +1

Query: 673  IVDSSKNAVKAVQVKARHMVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDLSSGIFGY 852
            +++ S +A   +   A     + K +Y +  F L    IT  I A+          +  +
Sbjct: 107  LMNPSSSATTPLPDLAAVFHGEIKCKYPDTAFQLGQRRITPIIKAV----------VSEH 156

Query: 853  FEGFYRNHMEEVIRFFEMHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNC 1014
            F  FY N  + +I   + H   K+   +  S  + D +LF+GK+ C  FD  NC
Sbjct: 157  FIAFYFNSSKVIITSGQPHTVVKWSPPD--SSYILDIALFQGKLYCLTFDIENC 208



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>AK071990:Os05g0524200 |
          Length = 377

 Score = 32.7 bits (73), Expect = 1.9
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 1093 VHCKAGKAR-TGLMISSLLVYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFER 1269
            VHCKAG+ R T +++  L+ Y    P A       +  R V  + L+ PSQ + VK F  
Sbjct: 165  VHCKAGRGRSTTIVLCYLIKYRNMTPEAA-----LDHARSVRPRVLLAPSQWQAVKLFSN 219

Query: 1270 ILT 1278
            + T
Sbjct: 220  LNT 222



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>Os10g0462700:Os10g0462700 |
          Length = 211

 Score = 32.3 bits (72), Expect = 2.5
 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
 Frame = +2

Query: 2855 REDGGEDTGSRGLTSRLD------GRHRES--RWGEGEEPGGAGLDLPLVAVGDGPGEIR 3010
            R  GG      G   RL       G  RE   RWGEGE     G   P V +  G  +I+
Sbjct: 117  RLGGGRRLQKEGAARRLGPWLRRKGAEREGCRRWGEGEGERRRGRASPAVEMRSGGEDIQ 176

Query: 3011 ASEER 3025
            AS+ER
Sbjct: 177  ASDER 181



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>Os01g0906400:Os01g0906400 |
          Length = 172

 Score = 32.3 bits (72), Expect = 2.5
 Identities = 29/89 (32%), Positives = 34/89 (38%)
 Frame = +2

Query: 2948 PGGAGLDLPLVAVGDGPGEIRASEERIG*RRAQLAGGHRRPGGAIFLVRRLMQXXXXXXX 3127
            P    L  PL  +  G G  RA       RR+    G  R G A+   RR  +       
Sbjct: 53   PPSPPLATPLPGLRSGAGVDRAH------RRSPRPSGETRSGDAV--ARRWSRREP---- 100

Query: 3128 XSMDTGCSPPPLNPAPKGPHRRQLAFPPP 3214
                T  +PPP  P P  P R  LA PPP
Sbjct: 101  ----TPSAPPP-RPTPHRPRRHDLAVPPP 124



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>AK060606:Os09g0408600 |
          Length = 501

 Score = 32.0 bits (71), Expect = 3.3
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 3149 SPPPLNPAPKGPHRRQLAFPPP 3214
            +PPP  P P  PHR   A PPP
Sbjct: 230  APPPPPPPPPSPHRHPAAHPPP 251



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>AK107278: |
          Length = 543

 Score = 31.2 bits (69), Expect = 5.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 479 QEDKPDVENMDDGVSRPAASCVVAEVGAEGD 387
           ++D  D E   + ++ PAA C  A V AEGD
Sbjct: 181 EDDGEDAETSSEAIAAPAALCGAAHVDAEGD 211



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>AK073172:Os01g0739200 |
          Length = 341

 Score = 31.2 bits (69), Expect = 5.6
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 1084 VVVVHCKAGKAR-TGLMISSLLVYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKY 1260
            +  VHCKAG+ R T +++  L+ Y    P A       +  R +  + L+ PSQ + V  
Sbjct: 158  ITYVHCKAGRGRSTTIVLCYLIKYRSMSPEAA-----LDHVRSIRPRVLLAPSQWQAVNV 212

Query: 1261 FERILT 1278
            F  + T
Sbjct: 213  FSTLTT 218



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>AB064519:Os12g0572000 |
          Length = 342

 Score = 30.8 bits (68), Expect = 7.3
 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
 Frame = -2

Query: 3154 RTATSVHRWGEGEQQQLHQSANEKDGSARPPMT--TSQLCSASSYSFFARPDFSRTVTNS 2981
            RTA  + +W E  +++  +   ++D    PP      + C+   Y +    DF+  + N 
Sbjct: 96   RTAKRLGKWWEVFKEKQQRELRDRDRRRLPPPLDGDERGCAGGRYDWLLE-DFADKLVND 154

Query: 2980 NKRKV--KPCTSRFLSLTPSALTVPSV 2906
            + R++   P    ++S +PS+ + PSV
Sbjct: 155  HHRRMMAAPILPPWMSSSPSSSSSPSV 181



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>Os05g0119100:Os05g0119100 |
          Length = 280

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -2

Query: 1093 QPPHFLCLPSTMSMHFGKMI*QVVSEDSYDRQKESMQPFPQKEMHHTAFL 944
            +PPH L L   M  H   M   +V E ++ R  E +QP P +   HT+FL
Sbjct: 49   RPPHIL-LRLAMLRHTRVMEVAMVEEGTWLRCLERVQPSPPRRTVHTSFL 97


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 107,060,217
Number of extensions: 2471501
Number of successful extensions: 7725
Number of sequences better than 10.0: 16
Number of HSP's gapped: 7690
Number of HSP's successfully gapped: 16
Length of query: 1235
Length of database: 15,399,855
Length adjustment: 112
Effective length of query: 1123
Effective length of database: 10,915,263
Effective search space: 12257840349
Effective search space used: 12257840349
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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