ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf37p04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK064842:Os04g0376000 | 197 | 5e-51 | 2 | AK119704:Os02g0503400 | 193 | 1e-49 | 3 | AK119701:Os02g0503400 | 193 | 1e-49 | 4 | AK059262:Os02g0503400 | 193 | 1e-49 | 5 | D10407:Os02g0503400 | 126 | 1e-29 | 6 | Os06g0732000:Os06g0732000 | 93 | 2e-19 | 7 | AK103725: | 31 | 0.85 | 8 | AK099805:Os02g0754300 | 30 | 1.1 | 9 | AK068621:Os02g0754300 | 30 | 1.1 | 10 | AK059012:Os02g0754300 | 30 | 1.1 | 11 | AK110124: | 30 | 1.9 | 12 | L24390:Os09g0402100 | 28 | 7.1 | 13 | AY336987:Os05g0108300 | 28 | 7.1 | 14 | AK068506:Os09g0402100 | 28 | 7.1 |
|---|
>AK064842:Os04g0376000 | Length = 123 Score = 197 bits (501), Expect = 5e-51 Identities = 106/123 (86%), Positives = 107/123 (86%) Frame = +3 Query: 66 MARIKVHELRGKNKTELQGQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV 245 MARIKVHELRGKNK ELQ QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV Sbjct: 1 MARIKVHELRGKNKAELQAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV 60 Query: 246 ISQKQKAALREAYXXXXXXXXXXXXXXTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA 425 ISQKQKAALREAY TRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA Sbjct: 61 ISQKQKAALREAYKKKSLLPLDLRPKKTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA 120 Query: 426 IKA 434 +KA Sbjct: 121 VKA 123
>AK119704:Os02g0503400 | Length = 123 Score = 193 bits (490), Expect = 1e-49 Identities = 105/123 (85%), Positives = 106/123 (86%) Frame = +3 Query: 66 MARIKVHELRGKNKTELQGQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV 245 MARIKV ELRGKNK ELQ QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV Sbjct: 1 MARIKVDELRGKNKAELQAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV 60 Query: 246 ISQKQKAALREAYXXXXXXXXXXXXXXTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA 425 ISQKQ+AALREAY TRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA Sbjct: 61 ISQKQRAALREAYKKKSLLPLDLRPKKTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA 120 Query: 426 IKA 434 IKA Sbjct: 121 IKA 123
>AK119701:Os02g0503400 | Length = 123 Score = 193 bits (490), Expect = 1e-49 Identities = 105/123 (85%), Positives = 106/123 (86%) Frame = +3 Query: 66 MARIKVHELRGKNKTELQGQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV 245 MARIKV ELRGKNK ELQ QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV Sbjct: 1 MARIKVDELRGKNKAELQAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV 60 Query: 246 ISQKQKAALREAYXXXXXXXXXXXXXXTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA 425 ISQKQ+AALREAY TRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA Sbjct: 61 ISQKQRAALREAYKKKSLLPLDLRPKKTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA 120 Query: 426 IKA 434 IKA Sbjct: 121 IKA 123
>AK059262:Os02g0503400 | Length = 123 Score = 193 bits (490), Expect = 1e-49 Identities = 105/123 (85%), Positives = 106/123 (86%) Frame = +3 Query: 66 MARIKVHELRGKNKTELQGQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV 245 MARIKV ELRGKNK ELQ QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV Sbjct: 1 MARIKVDELRGKNKAELQAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV 60 Query: 246 ISQKQKAALREAYXXXXXXXXXXXXXXTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA 425 ISQKQ+AALREAY TRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA Sbjct: 61 ISQKQRAALREAYKKKSLLPLDLRPKKTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA 120 Query: 426 IKA 434 IKA Sbjct: 121 IKA 123
>D10407:Os02g0503400 | Length = 83 Score = 126 bits (317), Expect = 1e-29 Identities = 68/83 (81%), Positives = 69/83 (83%) Frame = +3 Query: 186 PNKLSKIKVVRTSIARVLTVISQKQKAALREAYXXXXXXXXXXXXXXTRAIRRRLTKHQL 365 PNKLSKIKVVRTSIARVLTVISQKQ+AALREAY TRAIRRRLTKHQL Sbjct: 1 PNKLSKIKVVRTSIARVLTVISQKQRAALREAYKKKSLLPLDLRPKKTRAIRRRLTKHQL 60 Query: 366 SLKTEREKKREKYFPMRKYAIKA 434 SLKTEREKKREKYFPMRKYAIKA Sbjct: 61 SLKTEREKKREKYFPMRKYAIKA 83
>Os06g0732000:Os06g0732000 | Length = 290 Score = 92.8 bits (229), Expect = 2e-19 Identities = 59/102 (57%), Positives = 63/102 (61%), Gaps = 2/102 (1%) Frame = +3 Query: 63 AMARIKVHELRGKNKTELQGQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLT 242 AMARIKV LRG+NK ELQ QLKDLKAELS+LRVA+VTGGAPNKLS IKV Sbjct: 107 AMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIKV---------- 156 Query: 243 VISQKQKAALREAY--XXXXXXXXXXXXXXTRAIRRRLTKHQ 362 + ALREAY T AIRRRLTKHQ Sbjct: 157 ------RTALREAYKKKKKSLLPLDLRPKKTCAIRRRLTKHQ 192
>AK103725: | Length = 151 Score = 30.8 bits (68), Expect = 0.85 Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = +1 Query: 319 PRRPAPSAGVSPSISSH*RPRG--RRSVRSTSP*GSMLSR 432 PRRP P SPS S RG RRS R+TSP + SR Sbjct: 71 PRRPTPPPPSSPSASRSSPARGPRRRSPRNTSPASAAPSR 110
>AK099805:Os02g0754300 | Length = 165 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/61 (31%), Positives = 36/61 (59%) Frame = +3 Query: 78 KVHELRGKNKTELQGQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTVISQK 257 ++ E+R +++ ++ DLK EL +LR+ K + K S+ +R IAR+LTV ++ Sbjct: 71 ELEEIRAMPTEKIEEEVVDLKGELFMLRL-KRSARQEFKSSEFGRMRKRIARMLTVKRER 129 Query: 258 Q 260 + Sbjct: 130 E 130
>AK068621:Os02g0754300 | Length = 165 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/61 (31%), Positives = 36/61 (59%) Frame = +3 Query: 78 KVHELRGKNKTELQGQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTVISQK 257 ++ E+R +++ ++ DLK EL +LR+ K + K S+ +R IAR+LTV ++ Sbjct: 71 ELEEIRAMPTEKIEEEVVDLKGELFMLRL-KRSARQEFKSSEFGRMRKRIARMLTVKRER 129 Query: 258 Q 260 + Sbjct: 130 E 130
>AK059012:Os02g0754300 | Length = 165 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/61 (31%), Positives = 36/61 (59%) Frame = +3 Query: 78 KVHELRGKNKTELQGQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTVISQK 257 ++ E+R +++ ++ DLK EL +LR+ K + K S+ +R IAR+LTV ++ Sbjct: 71 ELEEIRAMPTEKIEEEVVDLKGELFMLRL-KRSARQEFKSSEFGRMRKRIARMLTVKRER 129 Query: 258 Q 260 + Sbjct: 130 E 130
>AK110124: | Length = 831 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +2 Query: 299 STARPPPQEDPRHPQASHQASALIEDREGEEA*EVLPHEEVCYQGLGY 442 STA PP RH ++S + +A+ R E+A +VL + +Q G+ Sbjct: 104 STAPPPSTPASRHSRSSGRQTAVCRVRNAEDADQVLELTKRIFQASGH 151
>L24390:Os09g0402100 | Length = 213 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = +2 Query: 305 ARPPPQEDPRHPQASHQASALIEDREGEEA*EVLPHEEVCYQGL 436 A P P P +P+ A ++DR G + H E Y+GL Sbjct: 15 ADPKPAATPSYPEMILAAIEALDDRNGSNKTAISQHIEGKYEGL 58
>AY336987:Os05g0108300 | Length = 542 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +3 Query: 84 HELRGKNKTELQGQLKDLKAELSLLRVAKVTGGAPN 191 + L+ K ++ Q+KDL LR+A TG A N Sbjct: 290 YPLQSNTKASVESQMKDLNTIFLKLRIADSTGHAQN 325
>AK068506:Os09g0402100 | Length = 213 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = +2 Query: 305 ARPPPQEDPRHPQASHQASALIEDREGEEA*EVLPHEEVCYQGL 436 A P P P +P+ A ++DR G + H E Y+GL Sbjct: 15 ADPKPAATPSYPEMILAAIEALDDRNGSNKTAISQHIEGKYEGL 58 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,889,622 Number of extensions: 269122 Number of successful extensions: 898 Number of sequences better than 10.0: 14 Number of HSP's gapped: 895 Number of HSP's successfully gapped: 14 Length of query: 221 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 124 Effective length of database: 11,515,878 Effective search space: 1427968872 Effective search space used: 1427968872 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
