| Clone Name | FLbaf40p20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001073658.1| Oryza sativa (japonica cultivar-group) Os12g0578800 (Os12g0578800) mRNA, complete cds Length = 1967 Score = 71.9 bits (36), Expect = 1e-08 Identities = 81/96 (84%) Strand = Plus / Plus Query: 253 tccagatatggcaccacgaggaagacctccgaagcatgtgtgcagcaagtgccataagag 312 |||||||||||||||| |||||| ||| ||||||| |||| ||||||| | ||||| Sbjct: 465 tccagatatggcaccaagaggaaagccttggaagcattgttgcaacaagtgcgacaagag 524 Query: 313 ctttccttcagggagggctcttggaggccacatgtc 348 ||| | |||||||| |||||||||||||||||||| Sbjct: 525 cttccgttcagggaatgctcttggaggccacatgtc 560 Score = 50.1 bits (25), Expect = 0.037 Identities = 28/29 (96%) Strand = Plus / Plus Query: 469 aacacaatgccagctgtgctcaaaggtgt 497 ||||||||||||| ||||||||||||||| Sbjct: 678 aacacaatgccagatgtgctcaaaggtgt 706
>dbj|AK102141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085L23, full insert sequence Length = 1968 Score = 71.9 bits (36), Expect = 1e-08 Identities = 81/96 (84%) Strand = Plus / Plus Query: 253 tccagatatggcaccacgaggaagacctccgaagcatgtgtgcagcaagtgccataagag 312 |||||||||||||||| |||||| ||| ||||||| |||| ||||||| | ||||| Sbjct: 466 tccagatatggcaccaagaggaaagccttggaagcattgttgcaacaagtgcgacaagag 525 Query: 313 ctttccttcagggagggctcttggaggccacatgtc 348 ||| | |||||||| |||||||||||||||||||| Sbjct: 526 cttccgttcagggaatgctcttggaggccacatgtc 561 Score = 50.1 bits (25), Expect = 0.037 Identities = 28/29 (96%) Strand = Plus / Plus Query: 469 aacacaatgccagctgtgctcaaaggtgt 497 ||||||||||||| ||||||||||||||| Sbjct: 679 aacacaatgccagatgtgctcaaaggtgt 707
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 67.9 bits (34), Expect = 2e-07 Identities = 79/94 (84%) Strand = Plus / Minus Query: 255 cagatatggcaccacgaggaagacctccgaagcatgtgtgcagcaagtgccataagagct 314 |||||||||||||| |||||| ||| ||||||| |||| ||||||| | ||||||| Sbjct: 23987489 cagatatggcaccaagaggaaagccttggaagcattgttgcaacaagtgcgacaagagct 23987430 Query: 315 ttccttcagggagggctcttggaggccacatgtc 348 | | |||||||| |||||||||||||||||||| Sbjct: 23987429 tccgttcagggaatgctcttggaggccacatgtc 23987396 Score = 50.1 bits (25), Expect = 0.037 Identities = 28/29 (96%) Strand = Plus / Minus Query: 469 aacacaatgccagctgtgctcaaaggtgt 497 ||||||||||||| ||||||||||||||| Sbjct: 23987278 aacacaatgccagatgtgctcaaaggtgt 23987250
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 67.9 bits (34), Expect = 2e-07 Identities = 79/94 (84%) Strand = Plus / Plus Query: 255 cagatatggcaccacgaggaagacctccgaagcatgtgtgcagcaagtgccataagagct 314 |||||||||||||| |||||| ||| ||||||| |||| ||||||| | ||||||| Sbjct: 99907 cagatatggcaccaagaggaaagccttggaagcattgttgcaacaagtgcgacaagagct 99966 Query: 315 ttccttcagggagggctcttggaggccacatgtc 348 | | |||||||| |||||||||||||||||||| Sbjct: 99967 tccgttcagggaatgctcttggaggccacatgtc 100000 Score = 50.1 bits (25), Expect = 0.037 Identities = 28/29 (96%) Strand = Plus / Plus Query: 469 aacacaatgccagctgtgctcaaaggtgt 497 ||||||||||||| ||||||||||||||| Sbjct: 100118 aacacaatgccagatgtgctcaaaggtgt 100146
>emb|AL732328.12| Mouse DNA sequence from clone RP23-106P4 on chromosome 2, complete sequence Length = 177649 Score = 52.0 bits (26), Expect = 0.009 Identities = 26/26 (100%) Strand = Plus / Minus Query: 61 gggggaggggaggcggaggcggaggc 86 |||||||||||||||||||||||||| Sbjct: 87133 gggggaggggaggcggaggcggaggc 87108
>emb|CR855212.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0311C03, complete sequence Length = 82144 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 60 ggggggaggggaggcggaggcgg 82 ||||||||||||||||||||||| Sbjct: 4660 ggggggaggggaggcggaggcgg 4638
>ref|NM_001062004.1| Oryza sativa (japonica cultivar-group) Os05g0397800 (Os05g0397800) mRNA, partial cds Length = 1046 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 69 ggaggcggaggcggaggccaccg 91 ||||||||||||||||||||||| Sbjct: 83 ggaggcggaggcggaggccaccg 61
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 gcggaggcggaggccaccgagga 95 ||||||||||||||||||||||| Sbjct: 7068325 gcggaggcggaggccaccgagga 7068303 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 ggcggaggcggaggccaccga 92 ||||||||||||||||||||| Sbjct: 8269949 ggcggaggcggaggccaccga 8269969
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 60 ggggggaggggaggcggaggcgg 82 ||||||||||||||||||||||| Sbjct: 103235 ggggggaggggaggcggaggcgg 103213
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 69 ggaggcggaggcggaggccaccg 91 ||||||||||||||||||||||| Sbjct: 13466 ggaggcggaggcggaggccaccg 13444
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 69 ggaggcggaggcggaggccaccg 91 ||||||||||||||||||||||| Sbjct: 27934 ggaggcggaggcggaggccaccg 27912
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 69 ggaggcggaggcggaggccaccg 91 ||||||||||||||||||||||| Sbjct: 131288 ggaggcggaggcggaggccaccg 131266
>gb|AC084727.14| Homo sapiens chromosome 10 clone RP11-507P23, complete sequence Length = 188652 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 689 atggatgctgcagcctctctcct 711 ||||||||||||||||||||||| Sbjct: 97528 atggatgctgcagcctctctcct 97506
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 69 ggaggcggaggcggaggccaccg 91 ||||||||||||||||||||||| Sbjct: 21822500 ggaggcggaggcggaggccaccg 21822478
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 69 ggaggcggaggcggaggccaccg 91 ||||||||||||||||||||||| Sbjct: 19209390 ggaggcggaggcggaggccaccg 19209368 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ggaggcggaggcggaggccac 89 ||||||||||||||||||||| Sbjct: 21188754 ggaggcggaggcggaggccac 21188774
>dbj|AK064931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O10, full insert sequence Length = 1045 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 69 ggaggcggaggcggaggccaccg 91 ||||||||||||||||||||||| Sbjct: 84 ggaggcggaggcggaggccaccg 62
>emb|CT033797.5| Mouse DNA sequence from clone RP23-451J17 on chromosome 17, complete sequence Length = 177126 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1773 gtgttgcaggcagtgttcactgg 1795 ||||||||||||||||||||||| Sbjct: 98332 gtgttgcaggcagtgttcactgg 98354
>emb|CR318596.19| Zebrafish DNA sequence from clone DKEY-104N16 in linkage group 7, complete sequence Length = 225081 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2180 ttgtttgttctgttggcttttg 2201 |||||||||||||||||||||| Sbjct: 62707 ttgtttgttctgttggcttttg 62728
>ref|NM_001071384.1| Oryza sativa (japonica cultivar-group) Os10g0476500 (Os10g0476500) mRNA, complete cds Length = 1585 Score = 44.1 bits (22), Expect = 2.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 accggggggaggggaggcggaggcggaggc 86 ||||| ||||| |||||||||||||||||| Sbjct: 339 accggcgggagcggaggcggaggcggaggc 368
>ref|NM_001055215.1| Oryza sativa (japonica cultivar-group) Os03g0105700 (Os03g0105700) mRNA, complete cds Length = 1339 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 62 ggggaggggaggcggaggcgga 83 |||||||||||||||||||||| Sbjct: 220 ggggaggggaggcggaggcgga 199
>ref|NM_001054305.1| Oryza sativa (japonica cultivar-group) Os02g0686400 (Os02g0686400) mRNA, complete cds Length = 2199 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gaggggaggcggaggcggaggc 86 |||||||||||||||||||||| Sbjct: 112 gaggggaggcggaggcggaggc 91
>gb|AC119166.16| Mus musculus chromosome 1, clone RP24-393L8, complete sequence Length = 163121 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 66 aggggaggcggaggcggaggccaccg 91 |||||||| ||||||||||||||||| Sbjct: 35074 aggggaggaggaggcggaggccaccg 35049
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 ggggaggggaggcggaggcgga 83 |||||||||||||||||||||| Sbjct: 52660 ggggaggggaggcggaggcgga 52681
>gb|AC122207.2| Mus musculus BAC clone RP23-88I22 from 16, complete sequence Length = 131490 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 987 attgctttggacaatgtgagac 1008 |||||||||||||||||||||| Sbjct: 61288 attgctttggacaatgtgagac 61309 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1284 attgctttggacaatgtgaga 1304 ||||||||||||||||||||| Sbjct: 61288 attgctttggacaatgtgaga 61308
>gb|AC157799.3| Mus musculus chromosome 1, clone RP24-154L11, complete sequence Length = 159548 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 66 aggggaggcggaggcggaggccaccg 91 |||||||| ||||||||||||||||| Sbjct: 3500 aggggaggaggaggcggaggccaccg 3525
>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 Score = 44.1 bits (22), Expect = 2.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 accggggggaggggaggcggaggcggaggc 86 ||||| ||||| |||||||||||||||||| Sbjct: 134266 accggcgggagcggaggcggaggcggaggc 134295
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 2.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 57 accggggggaggggaggcggaggcggaggc 86 ||||| ||||| |||||||||||||||||| Sbjct: 17238013 accggcgggagcggaggcggaggcggaggc 17237984
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gaggggaggcggaggcggaggc 86 |||||||||||||||||||||| Sbjct: 28132235 gaggggaggcggaggcggaggc 28132214
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 ggggaggggaggcggaggcgga 83 |||||||||||||||||||||| Sbjct: 325130 ggggaggggaggcggaggcgga 325151 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gggaggcggaggcggaggcca 88 ||||||||||||||||||||| Sbjct: 6624099 gggaggcggaggcggaggcca 6624119
>gb|AC078893.10| Oryza sativa chromosome 10 BAC OSJNBb0044B19 genomic sequence, complete sequence Length = 81784 Score = 44.1 bits (22), Expect = 2.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 accggggggaggggaggcggaggcggaggc 86 ||||| ||||| |||||||||||||||||| Sbjct: 9587 accggcgggagcggaggcggaggcggaggc 9616
>emb|AL772164.8| Mouse DNA sequence from clone RP23-400H4 on chromosome 11 no genes, complete sequence Length = 122032 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1716 caggtctcactgacatcactat 1737 |||||||||||||||||||||| Sbjct: 75250 caggtctcactgacatcactat 75271
>gb|AC093384.4| Homo sapiens BAC clone RP11-490P22 from 2, complete sequence Length = 103041 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1831 acagtcacttcacttttctgta 1852 |||||||||||||||||||||| Sbjct: 2884 acagtcacttcacttttctgta 2905
>gb|AC011742.3| Homo sapiens BAC clone RP11-214J9 from 2, complete sequence Length = 181210 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 61 gggggaggggaggcggaggcggaggc 86 ||||||||||||| |||||||||||| Sbjct: 128665 gggggaggggaggaggaggcggaggc 128690
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1717_A09 Length = 203132 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gaggggaggcggaggcggaggc 86 |||||||||||||||||||||| Sbjct: 121882 gaggggaggcggaggcggaggc 121861
>dbj|AK119608.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F07, full insert sequence Length = 2199 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gaggggaggcggaggcggaggc 86 |||||||||||||||||||||| Sbjct: 112 gaggggaggcggaggcggaggc 91
>dbj|AK110990.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-D09, full insert sequence Length = 1585 Score = 44.1 bits (22), Expect = 2.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 accggggggaggggaggcggaggcggaggc 86 ||||| ||||| |||||||||||||||||| Sbjct: 339 accggcgggagcggaggcggaggcggaggc 368
>dbj|AK100516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100E07, full insert sequence Length = 2600 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gaggggaggcggaggcggaggc 86 |||||||||||||||||||||| Sbjct: 473 gaggggaggcggaggcggaggc 452
>dbj|AK100031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148F02, full insert sequence Length = 1340 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 62 ggggaggggaggcggaggcgga 83 |||||||||||||||||||||| Sbjct: 221 ggggaggggaggcggaggcgga 200
>dbj|AK098984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093E04, full insert sequence Length = 2140 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gaggggaggcggaggcggaggc 86 |||||||||||||||||||||| Sbjct: 53 gaggggaggcggaggcggaggc 32
>dbj|AK068513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154D06, full insert sequence Length = 2160 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gaggggaggcggaggcggaggc 86 |||||||||||||||||||||| Sbjct: 53 gaggggaggcggaggcggaggc 32
>ref|XM_001020109.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00660460) mRNA, complete cds Length = 5235 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1655 gcgatgaaagagcaaaagcag 1675 ||||||||||||||||||||| Sbjct: 2468 gcgatgaaagagcaaaagcag 2488
>gb|DQ244309.1| Zea mays clone 4642 mRNA sequence Length = 828 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 gggggaggggaggcggaggcggagg 85 ||||||| ||||||||||||||||| Sbjct: 81 gggggagcggaggcggaggcggagg 105
>gb|AC188460.2| Mus musculus BAC clone RP23-454A11 from chromosome 7, complete sequence Length = 168367 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 aaagggaacaccaagccctcc 396 ||||||||||||||||||||| Sbjct: 111787 aaagggaacaccaagccctcc 111767
>emb|CT829671.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA002E24, full insert sequence Length = 1057 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ggaggcggaggcggaggccac 89 ||||||||||||||||||||| Sbjct: 335 ggaggcggaggcggaggccac 355
>dbj|AK231908.1| Sus scrofa mRNA, clone:LNG010045A02, expressed in lung Length = 1311 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1302 agaaggacagcagcttgaccc 1322 ||||||||||||||||||||| Sbjct: 217 agaaggacagcagcttgaccc 197
>ref|NM_001055976.1| Oryza sativa (japonica cultivar-group) Os03g0226700 (Os03g0226700) mRNA, complete cds Length = 789 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gggaggcggaggcggaggcca 88 ||||||||||||||||||||| Sbjct: 22 gggaggcggaggcggaggcca 2
>ref|NM_001048786.1| Oryza sativa (japonica cultivar-group) Os01g0187500 (Os01g0187500) mRNA, partial cds Length = 2142 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ggaggcggaggcggaggccac 89 ||||||||||||||||||||| Sbjct: 327 ggaggcggaggcggaggccac 347
>gb|CP000437.1| Francisella tularensis subsp. holarctica OSU18, complete genome Length = 1895727 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 869 aagtgttcagcttatgatatt 889 ||||||||||||||||||||| Sbjct: 1886024 aagtgttcagcttatgatatt 1886004
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 ggcggaggcggaggccaccgaggag 96 |||||||||||||| |||||||||| Sbjct: 1386692 ggcggaggcggagggcaccgaggag 1386716
>gb|AC186296.2| Mus musculus chromosome 5, clone wi1-979J3, complete sequence Length = 35640 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2188 tctgttggcttttggatgtgg 2208 ||||||||||||||||||||| Sbjct: 25156 tctgttggcttttggatgtgg 25136
>emb|AM039964.1| Equus caballus genomic BAC clone CH241-245H5, containing seven defensin genes and SPAG11 gene (partial) Length = 212614 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1985 ttactgcacagtacagcacctttgctcag 2013 |||||||||||| |||||||||| ||||| Sbjct: 163813 ttactgcacagttcagcaccttttctcag 163785
>emb|AM286280.1| Francisella tularensis subsp. tularensis strain FSC 198 complete genome Length = 1892616 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 869 aagtgttcagcttatgatatt 889 ||||||||||||||||||||| Sbjct: 1882954 aagtgttcagcttatgatatt 1882934
>gb|DQ682369.1| Synthetic construct Francisella tularensis clone FLH231340.01X trpC gene, complete sequence Length = 1362 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 869 aagtgttcagcttatgatatt 889 ||||||||||||||||||||| Sbjct: 1261 aagtgttcagcttatgatatt 1281
>ref|XM_001097689.1| PREDICTED: Macaca mulatta similar to tigger transposable element derived 5 (LOC709184), mRNA Length = 1872 Score = 42.1 bits (21), Expect = 9.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 61 gggggaggggaggcggaggcggaggccaccgag 93 |||||||| |||| ||||| ||||||||||||| Sbjct: 1162 gggggaggagaggaggaggaggaggccaccgag 1194
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 tcgacctggagctgttcgagc 173 ||||||||||||||||||||| Sbjct: 5031133 tcgacctggagctgttcgagc 5031153
>gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b06, complete sequence Length = 112592 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 ggggaggggaggcggaggcggaggc 86 |||||| |||||||||||||||||| Sbjct: 3512 ggggagcggaggcggaggcggaggc 3536
>gb|AC182629.3| Mus musculus BAC clone RP24-573O8 from chromosome 7, complete sequence Length = 168009 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 aaagggaacaccaagccctcc 396 ||||||||||||||||||||| Sbjct: 25042 aaagggaacaccaagccctcc 25062
>gb|AC157693.2| Xenopus tropicalis clone ISB1-181F7, complete sequence Length = 103707 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2182 gtttgttctgttggcttttgg 2202 ||||||||||||||||||||| Sbjct: 48058 gtttgttctgttggcttttgg 48078
>gb|AC165356.5| Mus musculus BAC clone RP23-142E18 from chromosome 7, complete sequence Length = 207936 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 aaagggaacaccaagccctcc 396 ||||||||||||||||||||| Sbjct: 58108 aaagggaacaccaagccctcc 58128
>gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome 7, complete sequence Length = 193749 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1473 ctgacaattcagttgagatga 1493 ||||||||||||||||||||| Sbjct: 122207 ctgacaattcagttgagatga 122187
>gb|AC166258.12| Mus musculus BAC RP23-353G9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216565 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2149 agaagctggtcagaattttat 2169 ||||||||||||||||||||| Sbjct: 81186 agaagctggtcagaattttat 81206
>gb|AC120413.20| Mus musculus chromosome 5, clone RP24-458L16, complete sequence Length = 163011 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2188 tctgttggcttttggatgtgg 2208 ||||||||||||||||||||| Sbjct: 8075 tctgttggcttttggatgtgg 8095
>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0088F07, complete sequence Length = 139180 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ggaggcggaggcggaggccac 89 ||||||||||||||||||||| Sbjct: 69537 ggaggcggaggcggaggccac 69557
>gb|AC087252.3| Papio anubis clone RP41-265N24, complete sequence Length = 179525 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 701 gcctctctcctgctgctttca 721 ||||||||||||||||||||| Sbjct: 27483 gcctctctcctgctgctttca 27503
>gb|AC087801.69| Mus musculus strain C57BL/6J clone rp23-396i23 map 1, complete sequence Length = 197679 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1318 gacccccaatgtttacaagaa 1338 ||||||||||||||||||||| Sbjct: 47800 gacccccaatgtttacaagaa 47820 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1318 gacccccaatgtttacaagaa 1338 ||||||||||||||||||||| Sbjct: 79415 gacccccaatgtttacaagaa 79435
>gb|AC142227.3| Mus musculus BAC clone RP24-115G21 from chromosome 12, complete sequence Length = 154904 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 ctcaaaggtgtcatctgcctg 507 ||||||||||||||||||||| Sbjct: 60653 ctcaaaggtgtcatctgcctg 60633
>gb|AC123871.4| Mus musculus BAC clone RP23-247L8 from chromosome 7, complete sequence Length = 184312 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 aaagggaacaccaagccctcc 396 ||||||||||||||||||||| Sbjct: 87720 aaagggaacaccaagccctcc 87740
>gb|AC166601.4| Nomascus leucogenys leucogenys clone CH271-401M10, complete sequence Length = 184404 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 701 gcctctctcctgctgctttca 721 ||||||||||||||||||||| Sbjct: 141459 gcctctctcctgctgctttca 141479
>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05, complete sequence Length = 127946 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gggaggcggaggcggaggcca 88 ||||||||||||||||||||| Sbjct: 10434 gggaggcggaggcggaggcca 10454
>ref|NM_169064.1| Drosophila melanogaster Pi4KIIalpha CG2929-RB, transcript variant B (Pi4KIIalpha), mRNA Length = 2587 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 ggcggaggcggaggccaccgaggag 96 |||||||||||||| |||||||||| Sbjct: 397 ggcggaggcggagggcaccgaggag 373
>gb|AC153155.6| Mus musculus BAC clone RP23-25J23 from chromosome 18, complete sequence Length = 227880 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1776 ttgcaggcagtgttcactggg 1796 ||||||||||||||||||||| Sbjct: 130979 ttgcaggcagtgttcactggg 130959
>gb|AC182428.2| Pan troglodytes BAC clone CH251-637G21 from chromosome 4, complete sequence Length = 210098 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 973 ttcagcttgtgaggattgctttgga 997 ||||| ||||||||||||||||||| Sbjct: 182212 ttcagtttgtgaggattgctttgga 182236
>gb|AC114797.5| Homo sapiens BAC clone RP11-704M14 from 4, complete sequence Length = 43323 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 973 ttcagcttgtgaggattgctttgga 997 ||||| ||||||||||||||||||| Sbjct: 4859 ttcagtttgtgaggattgctttgga 4835
>gb|AC107401.5| Homo sapiens BAC clone RP11-813N20 from 4, complete sequence Length = 104079 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1072 ttcagcttatgaggattgctttgga 1096 ||||| ||||||||||||||||||| Sbjct: 1287 ttcagtttatgaggattgctttgga 1263
>gb|AC108078.3| Homo sapiens BAC clone RP11-790I12 from 4, complete sequence Length = 103343 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 973 ttcagcttgtgaggattgctttgga 997 ||||| ||||||||||||||||||| Sbjct: 25533 ttcagtttgtgaggattgctttgga 25557
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ggaggcggaggcggaggccac 89 ||||||||||||||||||||| Sbjct: 4687497 ggaggcggaggcggaggccac 4687517
>gb|AC021146.7| Homo sapiens BAC clone RP11-468N14 from 4, complete sequence Length = 217991 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1072 ttcagcttatgaggattgctttgga 1096 ||||| ||||||||||||||||||| Sbjct: 714 ttcagtttatgaggattgctttgga 738 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1072 ttcagcttatgaggattgctttgga 1096 ||||| ||||||||||||||||||| Sbjct: 187777 ttcagtttatgaggattgctttgga 187753
>emb|AL035456.26|HS1099D15 Human DNA sequence from clone RP5-1099D15 on chromosome 20 Contains the 3' end of a novel gene, the JAG1 gene encoding Jagged 1 (involved in Alagille syndrome), a pseudogene aimilar to DNAJ protein, a CpG island, ESTs, STSs and GSSs, complete sequence Length = 125952 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2176 ttatttgtttgttctgttggctttt 2200 |||||||||||||||||||| |||| Sbjct: 17023 ttatttgtttgttctgttggttttt 17047
>emb|BX294143.1| Rhodopirellula baltica SH 1 complete genome; segment 11/24 Length = 303250 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1817 ttgtctgaactgccacagtca 1837 ||||||||||||||||||||| Sbjct: 72281 ttgtctgaactgccacagtca 72261
>emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chromosome 4 Contains the 3' end of the Col27a1 gene for procollagen type XXVII alpha 1, the Orm1, Orm2 and Orm3 genes for orosomucoid 1, 2 and 3, an orosomucoid pseudogene, the gene for a novel protein similar to human AT-hook protein AKNA, gene 4933437N03Rik, the Whrn gene for whirlin and two CpG islands, complete sequence Length = 214370 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 592 agctctggccattgctggtgg 612 ||||||||||||||||||||| Sbjct: 188368 agctctggccattgctggtgg 188388
>gb|AC155949.8| Mus musculus 6 BAC RP24-407P20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179931 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 ccaagccctcctaccactgtt 406 ||||||||||||||||||||| Sbjct: 83293 ccaagccctcctaccactgtt 83313
>gb|AC009538.4|AC009538 Drosophila melanogaster, chromosome 3R, region 83A-83A, BAC clone BACR24O24, complete sequence Length = 173927 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 ggcggaggcggaggccaccgaggag 96 |||||||||||||| |||||||||| Sbjct: 105297 ggcggaggcggagggcaccgaggag 105321
>dbj|AP002836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512G09 Length = 146921 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ggaggcggaggcggaggccac 89 ||||||||||||||||||||| Sbjct: 47742 ggaggcggaggcggaggccac 47762
>dbj|AP002816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695A04 Length = 158133 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ggaggcggaggcggaggccac 89 ||||||||||||||||||||| Sbjct: 94713 ggaggcggaggcggaggccac 94733
>dbj|AK111592.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092E23, full insert sequence Length = 2143 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ggaggcggaggcggaggccac 89 ||||||||||||||||||||| Sbjct: 328 ggaggcggaggcggaggccac 348
>emb|BX936338.11| Mouse DNA sequence from clone RP23-402O17 on chromosome 4, complete sequence Length = 66155 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gggggaggggaggcggaggcg 81 ||||||||||||||||||||| Sbjct: 18547 gggggaggggaggcggaggcg 18567
>gb|AF135417.1|AF135417 Homo sapiens UDP glycosyltransferase 2 family protein gene, partial cds Length = 6734 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 973 ttcagcttgtgaggattgctttgga 997 ||||| ||||||||||||||||||| Sbjct: 5738 ttcagtttgtgaggattgctttgga 5762
>dbj|AK068192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135O21, full insert sequence Length = 2200 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 aggggaggcggaggcggaggc 86 ||||||||||||||||||||| Sbjct: 179 aggggaggcggaggcggaggc 159
>gb|AC151009.3| Macaca mulatta clone CH250-569F1, complete sequence Length = 55553 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 701 gcctctctcctgctgctttca 721 ||||||||||||||||||||| Sbjct: 16005 gcctctctcctgctgctttca 16025
>gb|AY849272.1| Linum usitatissimum clone LU12 microsatellite sequence Length = 408 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2120 tcatatcttgaaatgattctt 2140 ||||||||||||||||||||| Sbjct: 191 tcatatcttgaaatgattctt 171
>emb|AM233362.1| Francisella tularensis subsp. holarctica LVS complete genome Length = 1895994 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 869 aagtgttcagcttatgatatt 889 ||||||||||||||||||||| Sbjct: 1886567 aagtgttcagcttatgatatt 1886547
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 869 aagtgttcagcttatgatatt 889 ||||||||||||||||||||| Sbjct: 1883157 aagtgttcagcttatgatatt 1883137
>gb|AC156348.3| Colobus guereza clone CH272-110A23, complete sequence Length = 115353 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 701 gcctctctcctgctgctttca 721 ||||||||||||||||||||| Sbjct: 95326 gcctctctcctgctgctttca 95346
>gb|AC153073.3| Chlorocebus aethiops clone CH252-228B1, complete sequence Length = 149508 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 701 gcctctctcctgctgctttca 721 ||||||||||||||||||||| Sbjct: 129873 gcctctctcctgctgctttca 129893
>gb|BT001304.1| Drosophila melanogaster AT12695 full insert cDNA Length = 2166 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 ggcggaggcggaggccaccgaggag 96 |||||||||||||| |||||||||| Sbjct: 397 ggcggaggcggagggcaccgaggag 373
>gb|AC148011.3| Mus musculus BAC clone RP23-202I21 from 18, complete sequence Length = 220253 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1776 ttgcaggcagtgttcactggg 1796 ||||||||||||||||||||| Sbjct: 164388 ttgcaggcagtgttcactggg 164408
>emb|AL731565.17| Mouse DNA sequence from clone RP23-83D8 on chromosome 4, complete sequence Length = 185273 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 gggggaggggaggcggaggcg 81 ||||||||||||||||||||| Sbjct: 90741 gggggaggggaggcggaggcg 90721
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1429 tcatgtgctggctggagatgc 1449 ||||||||||||||||||||| Sbjct: 525932 tcatgtgctggctggagatgc 525952 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 433,705,591 Number of extensions: 24905030 Number of successful extensions: 242210 Number of sequences better than 10.0: 98 Number of HSP's gapped: 242210 Number of HSP's successfully gapped: 108 Length of query: 2344 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2321 Effective length of database: 18,503,978,556 Effective search space: 42947734228476 Effective search space used: 42947734228476 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)