ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf37n04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK064788:Os04g0444600 | 652 | 0.0 | 2 | Os03g0576400:Os03g0576400 | 454 | e-128 | 3 | AK061617:Os04g0444600 | 261 | 1e-69 | 4 | AB070260:Os04g0444600 | 114 | 2e-25 | 5 | AK103258:Os01g0279200 | 89 | 9e-18 | 6 | AK063907:Os01g0279200 | 47 | 4e-05 | 7 | AK101870:Os03g0116500 | 40 | 0.004 | 8 | AF106844:Os03g0116500 | 40 | 0.004 | 9 | AK110040: | 32 | 1.0 | 10 | AK119846: | 31 | 2.3 | 11 | AK101635:Os07g0688100 | 31 | 2.3 | 12 | Os08g0526700:Os08g0526700 | 31 | 2.3 | 13 | Os11g0592400:Os11g0592400 | 31 | 2.9 | 14 | AK102831:Os06g0711600 | 30 | 3.8 | 15 | AK064384:Os06g0711600 | 30 | 3.8 | 16 | Os03g0563400:Os03g0563400 | 30 | 5.0 | 17 | AK062594:Os07g0187900 | 30 | 5.0 | 18 | AK065972:Os03g0243200 | 30 | 5.0 |
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>AK064788:Os04g0444600 | Length = 425 Score = 652 bits (1682), Expect = 0.0 Identities = 343/425 (80%), Positives = 361/425 (84%) Frame = +2 Query: 122 MSVMQSSYLPATPESIAMAQEAKDASESILILYRVLEDPSSSSDAVRTKEVAITNLTNYL 301 MS M+SSYLPAT ESIA AQEAKDASESI ILYRVL+DPSSS++A+RTKE+AITNLTNYL Sbjct: 1 MSSMESSYLPATTESIAKAQEAKDASESISILYRVLQDPSSSAEALRTKELAITNLTNYL 60 Query: 302 TIENRAEELRNLLTQLRPFFALIPKAKTAKIVRGIIDAVSKIPGTSDLQISLCKEMVEWT 481 T ENRAEELRNLLTQLRPFF+LIPKAKTAKIVRGIIDAV+KIPGTS+LQISLCKEMVEWT Sbjct: 61 TKENRAEELRNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQISLCKEMVEWT 120 Query: 482 RAEKRTFXXXXXXXXXXXXXXXXXXYTEALTLLSGLIKXXXXXXXXXXXXXXXXXXXXXH 661 RAEKRTF YTEALTLL+GLIK H Sbjct: 121 RAEKRTFLRQRVEARLAALLLENQEYTEALTLLTGLIKEVRRLDDKLLLVDIDLLESKLH 180 Query: 662 FSLRNLPXXXXXXXXXXXXXXXIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEG 841 FSLRNLP IYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFE Sbjct: 181 FSLRNLPKAKASLTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEA 240 Query: 842 FNALEDPKAIFCLKYMLLCKIMVNQADDVAGVISSKAGLKYVGPDVDAMKAVADAYSKRS 1021 F+ALEDPKAIF LKYMLLCKIMVNQADDVAG+ISSKAGLKY+GPDVDAMKAVADAYSKRS Sbjct: 241 FSALEDPKAIFSLKYMLLCKIMVNQADDVAGIISSKAGLKYLGPDVDAMKAVADAYSKRS 300 Query: 1022 LKYFETALGDYKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEAYSRVEIAHVAEMIELPI 1201 LKYFETAL DYK+QLEEDPIVHRHLSSLYDTLLEQNLCRLIE YSRVEIAH+AEMIELP+ Sbjct: 301 LKYFETALRDYKSQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAEMIELPV 360 Query: 1202 EHVEKKLSQMILDKKFAGTLDQGAGCLIIFEDAKTEAIFPATLETISNVGKVVESLYMRS 1381 +HVEKKLSQMILDKKFAGTLDQGAGCLIIFED KTEAIFPATLETISNVGKVV+SLYMRS Sbjct: 361 DHVEKKLSQMILDKKFAGTLDQGAGCLIIFEDPKTEAIFPATLETISNVGKVVDSLYMRS 420 Query: 1382 AKIMA 1396 AKIMA Sbjct: 421 AKIMA 425
>Os03g0576400:Os03g0576400 | Length = 310 Score = 454 bits (1169), Expect = e-128 Identities = 237/310 (76%), Positives = 249/310 (80%) Frame = +2 Query: 467 MVEWTRAEKRTFXXXXXXXXXXXXXXXXXXYTEALTLLSGLIKXXXXXXXXXXXXXXXXX 646 MVEWTRAEKRTF YT+ALTLL+ LIK Sbjct: 1 MVEWTRAEKRTFLRQRVEARLAALLLENQEYTDALTLLTDLIKEVRRLDDKLLLVDIDLL 60 Query: 647 XXXXHFSLRNLPXXXXXXXXXXXXXXXIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFF 826 HFSLRNLP IYVPPAQQGTID+QSGILHAEEKDYKTAYSYFF Sbjct: 61 ESKLHFSLRNLPKAKASLTAARTAANAIYVPPAQQGTIDIQSGILHAEEKDYKTAYSYFF 120 Query: 827 EAFEGFNALEDPKAIFCLKYMLLCKIMVNQADDVAGVISSKAGLKYVGPDVDAMKAVADA 1006 EAFE F+ALEDPKAIF LKYMLLCKIMVNQADDVAG+ISSKAGLKY+GPDVDAMKAVADA Sbjct: 121 EAFEAFSALEDPKAIFSLKYMLLCKIMVNQADDVAGIISSKAGLKYLGPDVDAMKAVADA 180 Query: 1007 YSKRSLKYFETALGDYKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEAYSRVEIAHVAEM 1186 YSKRSLKYFETAL DYK+QLEEDPIVHRHLSSLYD LLEQNLCRLIE Y+RVEIAH+AEM Sbjct: 181 YSKRSLKYFETALRDYKSQLEEDPIVHRHLSSLYDALLEQNLCRLIEPYARVEIAHIAEM 240 Query: 1187 IELPIEHVEKKLSQMILDKKFAGTLDQGAGCLIIFEDAKTEAIFPATLETISNVGKVVES 1366 IELP++HVEKKLSQMILDKKFAGTLDQGAGCLIIFED KTEAIFPATLETISNVGKVV+S Sbjct: 241 IELPVDHVEKKLSQMILDKKFAGTLDQGAGCLIIFEDPKTEAIFPATLETISNVGKVVDS 300 Query: 1367 LYMRSAKIMA 1396 LYMRSAKIMA Sbjct: 301 LYMRSAKIMA 310
>AK061617:Os04g0444600 | Length = 140 Score = 261 bits (667), Expect = 1e-69 Identities = 132/140 (94%), Positives = 137/140 (97%) Frame = +2 Query: 977 VDAMKAVADAYSKRSLKYFETALGDYKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEAYS 1156 VDAMKAVADAYSKRSLKYFETAL DYK+QLEEDPIVHRHLSSLYDTLLEQNLCRLIE YS Sbjct: 1 VDAMKAVADAYSKRSLKYFETALRDYKSQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYS 60 Query: 1157 RVEIAHVAEMIELPIEHVEKKLSQMILDKKFAGTLDQGAGCLIIFEDAKTEAIFPATLET 1336 RVEIAH+AEMIELP++HVEKKLSQMILDKKFAGTLDQGAGCLIIFED KTEAIFPATLET Sbjct: 61 RVEIAHIAEMIELPVDHVEKKLSQMILDKKFAGTLDQGAGCLIIFEDPKTEAIFPATLET 120 Query: 1337 ISNVGKVVESLYMRSAKIMA 1396 ISNVGKVV+SLYMRSAKIMA Sbjct: 121 ISNVGKVVDSLYMRSAKIMA 140
>AB070260:Os04g0444600 | Length = 60 Score = 114 bits (285), Expect = 2e-25 Identities = 58/60 (96%), Positives = 59/60 (98%) Frame = +2 Query: 1217 KLSQMILDKKFAGTLDQGAGCLIIFEDAKTEAIFPATLETISNVGKVVESLYMRSAKIMA 1396 KLSQMILDKKFAGTLDQGAGCLIIFED KTEAIFPATLETISNVGKVV+SLYMRSAKIMA Sbjct: 1 KLSQMILDKKFAGTLDQGAGCLIIFEDPKTEAIFPATLETISNVGKVVDSLYMRSAKIMA 60
>AK103258:Os01g0279200 | Length = 439 Score = 89.0 bits (219), Expect = 9e-18 Identities = 50/176 (28%), Positives = 90/176 (51%) Frame = +2 Query: 740 PAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEGFNALEDPKAIFCLKYMLLCKIMVNQA 919 P G I G +H E+ + A + FFEAF+ ++ +P+ I CLKY++L +++ Sbjct: 227 PRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLANMLMES- 285 Query: 920 DDVAGVISSKAGLKYVGPDVDAMKAVADAYSKRSLKYFETALGDYKAQLEEDPIVHRHLS 1099 +V +A P++ AM + AY K + FE L + + +DP + ++ Sbjct: 286 -EVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIE 344 Query: 1100 SLYDTLLEQNLCRLIEAYSRVEIAHVAEMIELPIEHVEKKLSQMILDKKFAGTLDQ 1267 L + Q L +LI+ Y+R+ I +++ + P + VE+ L +ILD + G +DQ Sbjct: 345 DLLKNIRTQVLLKLIKPYTRIRIPFISQELNFPEKDVEQLLVSLILDNRIQGHIDQ 400
>AK063907:Os01g0279200 | Length = 112 Score = 47.0 bits (110), Expect = 4e-05 Identities = 20/66 (30%), Positives = 38/66 (57%) Frame = +2 Query: 1070 EDPIVHRHLSSLYDTLLEQNLCRLIEAYSRVEIAHVAEMIELPIEHVEKKLSQMILDKKF 1249 +DP + ++ L + Q L +LI+ Y+R+ I +++ + P + VE+ L +ILD + Sbjct: 8 DDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNFPEKDVEQLLVSLILDNRI 67 Query: 1250 AGTLDQ 1267 G +DQ Sbjct: 68 QGHIDQ 73
>AK101870:Os03g0116500 | Length = 441 Score = 40.4 bits (93), Expect = 0.004 Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 3/207 (1%) Frame = +2 Query: 770 SGILHAEEKDYKTAYSYFFEAFE--GFNALEDPKAIFCLKYMLLCKIM-VNQADDVAGVI 940 +G+ + K YK A F E G N E Y LC + +++D + VI Sbjct: 220 AGLAYLATKKYKLAARKFVETGHELGNNYSEVIAPQDVAVYGALCALASFDRSDLKSKVI 279 Query: 941 SSKAGLKYVGPDVDAMKAVADAYSKRSLKYFETALGDYKAQLEEDPIVHRHLSSLYDTLL 1120 + ++ + + V D YS R E L K L D +H H+ +LY + Sbjct: 280 DNSNFRNFLELVPEVRELVNDFYSSRYGSCLEH-LEKLKTNLLLDIHLHDHVETLYMDIR 338 Query: 1121 EQNLCRLIEAYSRVEIAHVAEMIELPIEHVEKKLSQMILDKKFAGTLDQGAGCLIIFEDA 1300 + + + + V++ +A + +EK+L+ +I + K +D L Sbjct: 339 HKAIIQYTLPFISVDLNTMAAAFMTSVSMLEKELAALITENKIQARIDSHNKILYARHAD 398 Query: 1301 KTEAIFPATLETISNVGKVVESLYMRS 1381 + A F L+T + + V+SL +R+ Sbjct: 399 QRNATFQRVLQTGNEFERDVKSLLLRA 425
>AF106844:Os03g0116500 | Length = 441 Score = 40.4 bits (93), Expect = 0.004 Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 3/207 (1%) Frame = +2 Query: 770 SGILHAEEKDYKTAYSYFFEAFE--GFNALEDPKAIFCLKYMLLCKIM-VNQADDVAGVI 940 +G+ + K YK A F E G N E Y LC + +++D + VI Sbjct: 220 AGLAYLATKKYKLAARKFVETGHELGNNYSEVIAPQDVAVYGALCALASFDRSDLKSKVI 279 Query: 941 SSKAGLKYVGPDVDAMKAVADAYSKRSLKYFETALGDYKAQLEEDPIVHRHLSSLYDTLL 1120 + ++ + + V D YS R E L K L D +H H+ +LY + Sbjct: 280 DNSNFRNFLELVPEVRELVNDFYSSRYGSCLEH-LEKLKTNLLLDIHLHDHVETLYMDIR 338 Query: 1121 EQNLCRLIEAYSRVEIAHVAEMIELPIEHVEKKLSQMILDKKFAGTLDQGAGCLIIFEDA 1300 + + + + V++ +A + +EK+L+ +I + K +D L Sbjct: 339 HKAIIQYTLPFISVDLNTMAAAFMTSVSMLEKELAALITENKIQARIDSHNKILYARHAD 398 Query: 1301 KTEAIFPATLETISNVGKVVESLYMRS 1381 + A F L+T + + V+SL +R+ Sbjct: 399 QRNATFQRVLQTGNEFERDVKSLLLRA 425
>AK110040: | Length = 1332 Score = 32.3 bits (72), Expect = 1.0 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Frame = -2 Query: 1274 PRPDPESLRISCPGSSVTASSPHARLA-----TRSSLLRVQSPPLSRLQSACTGSAPGGY 1110 P+P P + PGS + P R+A ++L V+SPPL P G Sbjct: 118 PQPQPHQAQQQPPGSGPNSQPPTPRVANSAASANAALASVRSPPLHSAAIVNVHIPPAGG 177 Query: 1109 HT---ETRGACGQ*DPPPA 1062 H+ + A +PPPA Sbjct: 178 HSPVVTSSEAAALDNPPPA 196
>AK119846: | Length = 648 Score = 31.2 bits (69), Expect = 2.3 Identities = 23/74 (31%), Positives = 31/74 (41%) Frame = -2 Query: 1280 GSPRPDPESLRISCPGSSVTASSPHARLATRSSLLRVQSPPLSRLQSACTGSAPGGYHTE 1101 G P P R P + A SP + S+L + PP R S PGG + Sbjct: 20 GRRPPPPRPGRAESPSLAARAQSPATAASPVRSMLDIGGPPAPRSMLDAV-SRPGG-RSS 77 Query: 1100 TRGACGQ*DPPPAG 1059 +RG+ PPP+G Sbjct: 78 SRGSIPS-SPPPSG 90
>AK101635:Os07g0688100 | Length = 665 Score = 31.2 bits (69), Expect = 2.3 Identities = 22/87 (25%), Positives = 39/87 (44%) Frame = +2 Query: 1010 SKRSLKYFETALGDYKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEAYSRVEIAHVAEMI 1189 S R + F T + + +P H LS L+ + + C +I +E +E + Sbjct: 28 SSRQVARFSTGVDN------ANPGAHCRLSELFRPVRTETSCVIIGR--ALECGRWSESV 79 Query: 1190 ELPIEHVEKKLSQMILDKKFAGTLDQG 1270 EL +E + +L +++K G LD G Sbjct: 80 ELELEGLHVELDPFVVNKVLRGLLDSG 106
>Os08g0526700:Os08g0526700 | Length = 488 Score = 31.2 bits (69), Expect = 2.3 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +1 Query: 1147 SLLKGGDCTRSRDDRVANRACGEEA 1221 SLL GGDC RS D V R+C A Sbjct: 98 SLLGGGDCKRSAGDEVVRRSCSPMA 122
>Os11g0592400:Os11g0592400 | Length = 861 Score = 30.8 bits (68), Expect = 2.9 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = +3 Query: 12 PSPIPSTLGPAAIERLLPPHRVISAGNRLSLAR 110 PSP+ + L PA + PP RV+ G R SL+R Sbjct: 350 PSPVDADLLPATVPGYKPPFRVLPYGVRPSLSR 382
>AK102831:Os06g0711600 | Length = 340 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = +2 Query: 968 GPDVDAMKAVADAYSKRSLKYFETALGDYKAQLEEDPIVHRHLSSL----YDTLLEQNLC 1135 G DV K + DAY KR+ K E + Y E DP +R SSL + E+N+ Sbjct: 217 GWDVFNQKTLYDAYKKRT-KNIEVDMEAYNKAKEADPEFYRDASSLQYGKVSKVPEENID 275 Query: 1136 RLI 1144 R++ Sbjct: 276 RMV 278
>AK064384:Os06g0711600 | Length = 340 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = +2 Query: 968 GPDVDAMKAVADAYSKRSLKYFETALGDYKAQLEEDPIVHRHLSSL----YDTLLEQNLC 1135 G DV K + DAY KR+ K E + Y E DP +R SSL + E+N+ Sbjct: 217 GWDVFNQKTLYDAYKKRT-KNIEVDMEAYNKAKEADPEFYRDASSLQYGKVSKVPEENID 275 Query: 1136 RLI 1144 R++ Sbjct: 276 RMV 278
>Os03g0563400:Os03g0563400 | Length = 746 Score = 30.0 bits (66), Expect = 5.0 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = -2 Query: 1205 ARLATRSSLL-RVQSPPLSRLQSACTGSAPGGYHTETRGACGQ*DPPP 1065 A L +R L R PPL R + + P G R A G+ DPPP Sbjct: 41 AALGSRRLLTGRADPPPLGRGEGGSAAAVPWGGPIRRRRATGRPDPPP 88
>AK062594:Os07g0187900 | Length = 253 Score = 30.0 bits (66), Expect = 5.0 Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 6/99 (6%) Frame = -2 Query: 1277 SPRPDPESLRISCPGSSVTASSPHARLA------TRSSLLRVQSPPLSRLQSACTGSAPG 1116 +P P + ++ G S + SSP + T S+ R S P S T S+PG Sbjct: 80 TPPPSSSASALARSGRSCSPSSPRCSASSTTPRSTTSAAWRAPSAPTSS-----TSSSPG 134 Query: 1115 GYHTETRGACGQ*DPPPAGPCSHQEQFQSTSEIASSRHR 999 G T R PPA + + S SS R Sbjct: 135 GSTTRRRAGSPAPASPPAPAATRCASASTASRSPSSSSR 173
>AK065972:Os03g0243200 | Length = 233 Score = 30.0 bits (66), Expect = 5.0 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%) Frame = +1 Query: 931 RSNLVQGRPEVCWS*CGCYESCGRCLLEAISE--VL*NCSW*LQGPAGGGSYCPQAPLVS 1104 ++ V+ EVC++ G +L+A S L NC W ++GP +Y P + VS Sbjct: 45 KTQYVKYGEEVCFN--------GMLMLKASSSGLELGNCVWTIKGPRASMTYLPSSIFVS 96 Query: 1105 V*YPPGAEPVQAD*SLLKGGD 1167 A + D S LKG D Sbjct: 97 ------AHALDFDYSSLKGND 111 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 50,091,972 Number of extensions: 1227083 Number of successful extensions: 3502 Number of sequences better than 10.0: 18 Number of HSP's gapped: 3495 Number of HSP's successfully gapped: 18 Length of query: 552 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 446 Effective length of database: 11,155,509 Effective search space: 4975357014 Effective search space used: 4975357014 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
