ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf40n13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073283:Os03g0395000 | 318 | 4e-87 | 2 | AK061587:Os03g0395000 | 195 | 6e-50 | 3 | AK104955:Os06g0603000 | 187 | 2e-47 | 4 | AK068856:Os06g0603000 | 187 | 2e-47 | 5 | AK069040:Os10g0430200 | 33 | 0.63 | 6 | AK070264:Os07g0177100 | 31 | 2.4 | 7 | AK110355: | 30 | 4.1 | 8 | AK100250:Os03g0769800 | 30 | 4.1 | 9 | Os08g0484100:Os08g0484100 | 30 | 5.3 | 10 | AK064551:Os07g0177100 | 29 | 6.9 | 11 | AK120404:Os04g0129500 | 29 | 9.0 | 12 | AK071986:Os04g0129500 | 29 | 9.0 | 13 | AY601878:Os08g0504700 | 29 | 9.0 | 14 | AY224422:Os08g0504700 | 29 | 9.0 | 15 | AK120748:Os03g0832400 | 29 | 9.0 | 16 | AK106990:Os01g0126100 | 29 | 9.0 | 17 | AK106070:Os06g0302000 | 29 | 9.0 | 18 | AK101969:Os08g0504700 | 29 | 9.0 |
|---|
>AK073283:Os03g0395000 | Length = 330 Score = 318 bits (816), Expect = 4e-87 Identities = 184/329 (55%), Positives = 207/329 (62%), Gaps = 26/329 (7%) Frame = +3 Query: 48 MPLAIAVPSAAA-----PLRRPHHFRFLQPSRKLSLSR-------TRCASSLPA------ 173 MPLA AV ++A P P R L+ L L+R RCA S PA Sbjct: 1 MPLAAAVAASAVVPPRPPPPPPRRARPLRSFTGLILTRDLAALTVARCAPSPPAPAAEAE 60 Query: 174 -------ETXXXXXXXXXXXXXXXGEAVGVAEEIRFVAMRLRNTKRSTRKGNNR-AXXXX 329 E GEAVGVAEE+RFVAMRLRN KR+T K ++ A Sbjct: 61 AEAVAVDEAPPAKPRPRRYPRQYPGEAVGVAEEMRFVAMRLRNPKRTTLKMDDTGAEEEV 120 Query: 330 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWMPSMEGFVRYLVDSKLVFDTVER 509 WMPSMEGFV+YLVDSKLVFDTVER Sbjct: 121 GDGVSEDASASEEEEEEEDDDDVVEEEEEGAGLEGEWMPSMEGFVKYLVDSKLVFDTVER 180 Query: 510 IIAGSTDVAYVYFRRSGMERAASIEKDLEWFREQAIEIPEPSTFGSTYAAYLSELAGRSA 689 I+A STDVAYVYFR+SG+ER+A I KDLEWF Q I +PEPST GSTYA YL+ELA +A Sbjct: 181 IVAESTDVAYVYFRKSGLERSARITKDLEWFGGQGIAVPEPSTAGSTYATYLTELAESNA 240 Query: 690 PAFLSHYYNIYFSHTTGGLAIGKKTCDKILEGRLLEFYKWDSDPEILLKDAREKLNELSK 869 PAFLSHYYNIYF+HTTGG+AIG K KILEGR LEFYKWDSD E+LLKD REKLNELSK Sbjct: 241 PAFLSHYYNIYFAHTTGGVAIGNKISKKILEGRELEFYKWDSDVELLLKDTREKLNELSK 300 Query: 870 HWSRKDRNLCLKEAAKCFQYMGRIVRLMV 956 HWSRKDRNLCLKEAAKCFQ++GRIVRL++ Sbjct: 301 HWSRKDRNLCLKEAAKCFQHLGRIVRLII 329
>AK061587:Os03g0395000 | Length = 115 Score = 195 bits (496), Expect = 6e-50 Identities = 92/114 (80%), Positives = 102/114 (89%) Frame = +3 Query: 615 IEIPEPSTFGSTYAAYLSELAGRSAPAFLSHYYNIYFSHTTGGLAIGKKTCDKILEGRLL 794 I +PEPST GSTYA YL+ELA +APAFLSHYYNIYF+HTTGG+AIG K KILEGR L Sbjct: 1 IAVPEPSTAGSTYATYLTELAESNAPAFLSHYYNIYFAHTTGGVAIGNKISKKILEGREL 60 Query: 795 EFYKWDSDPEILLKDAREKLNELSKHWSRKDRNLCLKEAAKCFQYMGRIVRLMV 956 EFYKWDSD E+LLKD REKLNELSKHWSRKDRNLCLKEAAKCFQ++GRIVRL++ Sbjct: 61 EFYKWDSDVELLLKDTREKLNELSKHWSRKDRNLCLKEAAKCFQHLGRIVRLII 114
>AK104955:Os06g0603000 | Length = 289 Score = 187 bits (475), Expect = 2e-47 Identities = 84/170 (49%), Positives = 122/170 (71%) Frame = +3 Query: 438 WMPSMEGFVRYLVDSKLVFDTVERIIAGSTDVAYVYFRRSGMERAASIEKDLEWFREQAI 617 W PS++G++R+LVDSKLVF+T+E I+ + Y FR +G+ER+ ++KDLEWF+EQ Sbjct: 116 WEPSVDGYLRFLVDSKLVFETLETIVDRAAVPWYAEFRNTGLERSEQLKKDLEWFKEQGH 175 Query: 618 EIPEPSTFGSTYAAYLSELAGRSAPAFLSHYYNIYFSHTTGGLAIGKKTCDKILEGRLLE 797 IPEPS G+TYA+YL ELA + + AF+ H+YN+YF+HT GG IGKK + IL + LE Sbjct: 176 TIPEPSAPGTTYASYLEELAEKDSQAFICHFYNVYFAHTAGGRMIGKKVSENILNKKELE 235 Query: 798 FYKWDSDPEILLKDAREKLNELSKHWSRKDRNLCLKEAAKCFQYMGRIVR 947 FYKW+ + LL++ R KLNE++ W+R++++ CL E K F Y G ++R Sbjct: 236 FYKWEGNLSQLLQNVRNKLNEVASSWTREEKDHCLDETEKSFSYSGDLLR 285
>AK068856:Os06g0603000 | Length = 289 Score = 187 bits (475), Expect = 2e-47 Identities = 84/170 (49%), Positives = 122/170 (71%) Frame = +3 Query: 438 WMPSMEGFVRYLVDSKLVFDTVERIIAGSTDVAYVYFRRSGMERAASIEKDLEWFREQAI 617 W PS++G++R+LVDSKLVF+T+E I+ + Y FR +G+ER+ ++KDLEWF+EQ Sbjct: 116 WEPSVDGYLRFLVDSKLVFETLETIVDRAAVPWYAEFRNTGLERSEQLKKDLEWFKEQGH 175 Query: 618 EIPEPSTFGSTYAAYLSELAGRSAPAFLSHYYNIYFSHTTGGLAIGKKTCDKILEGRLLE 797 IPEPS G+TYA+YL ELA + + AF+ H+YN+YF+HT GG IGKK + IL + LE Sbjct: 176 TIPEPSAPGTTYASYLEELAEKDSQAFICHFYNVYFAHTAGGRMIGKKVSENILNKKELE 235 Query: 798 FYKWDSDPEILLKDAREKLNELSKHWSRKDRNLCLKEAAKCFQYMGRIVR 947 FYKW+ + LL++ R KLNE++ W+R++++ CL E K F Y G ++R Sbjct: 236 FYKWEGNLSQLLQNVRNKLNEVASSWTREEKDHCLDETEKSFSYSGDLLR 285
>AK069040:Os10g0430200 | Length = 421 Score = 32.7 bits (73), Expect = 0.63 Identities = 21/46 (45%), Positives = 26/46 (56%) Frame = +2 Query: 89 PATTSLPLSPAIKKA*PIQNTLRLFAPGRDAASSSATPAVPEAVPR 226 P TT L LSP+ A P L LFAPG +SSS+ P + + PR Sbjct: 3 PRTTPLLLSPSRAIARPQITPLHLFAPG---SSSSSHPLLSHSTPR 45
>AK070264:Os07g0177100 | Length = 674 Score = 30.8 bits (68), Expect = 2.4 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 7/68 (10%) Frame = +3 Query: 558 GMERAASIEKDLEWFR------EQAIEI-PEPSTFGSTYAAYLSELAGRSAPAFLSHYYN 716 GM A EKD E + E +++ P+PS + YA+ + E+ LS YY Sbjct: 178 GMCEAIDEEKDPECLKLSFNLVEAVMKLFPDPSGLAAQYASEVFEI--------LSKYYP 229 Query: 717 IYFSHTTG 740 IYF+H G Sbjct: 230 IYFTHGVG 237
>AK110355: | Length = 1060 Score = 30.0 bits (66), Expect = 4.1 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +2 Query: 65 RPLGGGAAPATTSLPLSPAIKKA*PIQNTLRLFAPGRDAA-SSSATPAVPEAVPRRGGG 238 +P+ AAPA T+ P +PA + AP A ++ ATPA P GGG Sbjct: 150 KPVPVAAAPAATAAPATPAPAAVTAAGAGTKTPAPATPATPAAPATPATPGTAGGAGGG 208
>AK100250:Os03g0769800 | Length = 242 Score = 30.0 bits (66), Expect = 4.1 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 121 GWRKRK*CGRRSGAAAEGTAMASGMVIHLDLGKQLHY 11 GWR+R C RSG+ ++G+ +D GK +HY Sbjct: 139 GWRQRWRCPMRSGSGSDGSGYDKA---GMDSGKYVHY 172
>Os08g0484100:Os08g0484100 | Length = 532 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -1 Query: 520 PAMIRSTVSKTSLLSTRYLTNPSMLGI 440 PA I T+ + L+ RY NPS+LGI Sbjct: 319 PANIEKTLDVINFLAQRYANNPSLLGI 345
>AK064551:Os07g0177100 | Length = 170 Score = 29.3 bits (64), Expect = 6.9 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 7/65 (10%) Frame = +3 Query: 558 GMERAASIEKDLEWFR------EQAIEI-PEPSTFGSTYAAYLSELAGRSAPAFLSHYYN 716 GM A EKD E + E +++ P+PS + YA+ + E+ LS YY Sbjct: 95 GMCEAIDEEKDPECLKLSFNLVEAVMKLFPDPSGLAAQYASEVFEI--------LSKYYP 146 Query: 717 IYFSH 731 IYF+H Sbjct: 147 IYFTH 151
>AK120404:Os04g0129500 | Length = 1031 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -3 Query: 566 FHTTSPEVNIGDVRRPGDDPLDGVEDKLAIHKVPHEPFH 450 F +T P + +G +R GDD DK +VP +PF+ Sbjct: 574 FQSTLPSLGVGRLRLRGDDVRAYGTDKEHSLRVPEDPFY 612
>AK071986:Os04g0129500 | Length = 665 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -3 Query: 566 FHTTSPEVNIGDVRRPGDDPLDGVEDKLAIHKVPHEPFH 450 F +T P + +G +R GDD DK +VP +PF+ Sbjct: 283 FQSTLPSLGVGRLRLRGDDVRAYGTDKEHSLRVPEDPFY 321
>AY601878:Os08g0504700 | Length = 170 Score = 28.9 bits (63), Expect = 9.0 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 8/71 (11%) Frame = +2 Query: 83 AAPATTSLPLSPAIKKA*PIQNTLRLFAPGRDAASSSATPAVPEAVPRRGGG-------R 241 A+P+TTSLP+ P ++K R A SSA AV V R G Sbjct: 56 ASPSTTSLPVFPVVEKP-------------RQAVQSSAAAAVALVVERPTAGPVESSSKA 102 Query: 242 CRGDTV-RCHA 271 R +V RCH+ Sbjct: 103 SRSSSVNRCHS 113
>AY224422:Os08g0504700 | Length = 170 Score = 28.9 bits (63), Expect = 9.0 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 8/71 (11%) Frame = +2 Query: 83 AAPATTSLPLSPAIKKA*PIQNTLRLFAPGRDAASSSATPAVPEAVPRRGGG-------R 241 A+P+TTSLP+ P ++K R A SSA AV V R G Sbjct: 56 ASPSTTSLPVFPVVEKP-------------RQAVQSSAAAAVALVVERPTAGPVESSSKA 102 Query: 242 CRGDTV-RCHA 271 R +V RCH+ Sbjct: 103 SRSSSVNRCHS 113
>AK120748:Os03g0832400 | Length = 386 Score = 28.9 bits (63), Expect = 9.0 Identities = 22/64 (34%), Positives = 29/64 (45%) Frame = -2 Query: 279 CGGAWQRTVSPRQRPPPRLGTASGTAGVAEELAASLPGAKRRSVFWIG*AFLMAGESGSD 100 CGG W SP PP R ++S A A++ AA + ++W A AGE Sbjct: 12 CGGVWP--TSP--APPARSSSSSSAAAAADQAAAE---GRDGLLWWRDLARCHAGELSVA 64 Query: 99 VVAG 88 VV G Sbjct: 65 VVQG 68
>AK106990:Os01g0126100 | Length = 582 Score = 28.9 bits (63), Expect = 9.0 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = +2 Query: 80 GAAPATTSLPLSPAIKKA*--PIQNTLRLFAPGRDAASSSATPAVPEAVPRRGG 235 G + AT + P P I+ A P+ T + + P R P VP A+PRRGG Sbjct: 94 GTSAATATFP-GPTIEAAQGVPLSVTWQNYLPARHILPWD--PTVPTAIPRRGG 144
>AK106070:Os06g0302000 | Length = 297 Score = 28.9 bits (63), Expect = 9.0 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = +2 Query: 41 DNHAARHCRPLGGGAAP 91 D ARH RP GGGAAP Sbjct: 88 DTVGARHLRPAGGGAAP 104
>AK101969:Os08g0504700 | Length = 170 Score = 28.9 bits (63), Expect = 9.0 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 8/71 (11%) Frame = +2 Query: 83 AAPATTSLPLSPAIKKA*PIQNTLRLFAPGRDAASSSATPAVPEAVPRRGGG-------R 241 A+P+TTSLP+ P ++K R A SSA AV V R G Sbjct: 56 ASPSTTSLPVFPVVEKP-------------RQAVQSSAAAAVALVVERPTAGPVESSSKA 102 Query: 242 CRGDTV-RCHA 271 R +V RCH+ Sbjct: 103 SRSSSVNRCHS 113 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 37,152,429 Number of extensions: 816035 Number of successful extensions: 2862 Number of sequences better than 10.0: 18 Number of HSP's gapped: 2857 Number of HSP's successfully gapped: 19 Length of query: 461 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 357 Effective length of database: 11,235,591 Effective search space: 4011105987 Effective search space used: 4011105987 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
