ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf44i09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK108295: | 132 | 1e-31 | 2 | D38011:Os01g0823300 | 122 | 1e-28 | 3 | AK121584:Os05g0477300 | 122 | 1e-28 | 4 | AK119797:Os05g0477300 | 122 | 1e-28 | 5 | AK119693:Os05g0477300 | 122 | 1e-28 | 6 | AK119683:Os05g0477300 | 122 | 1e-28 | 7 | AK098982:Os05g0477300 | 122 | 1e-28 | 8 | AK061933:Os05g0477300 | 122 | 1e-28 | 9 | AK062822: | 89 | 1e-18 | 10 | AK109021:Os03g0816200 | 32 | 0.21 | 11 | AK121330:Os11g0578500 | 28 | 3.0 | 12 | AK062108: | 27 | 8.7 | 13 | AK100624:Os09g0503400 | 27 | 8.7 | 14 | AK099796:Os09g0503400 | 27 | 8.7 |
|---|
>AK108295: | Length = 122 Score = 132 bits (331), Expect = 1e-31 Identities = 61/92 (66%), Positives = 75/92 (81%), Gaps = 2/92 (2%) Frame = +3 Query: 99 HVCAVRCTNCGRSVPKDKAIKRFIVRNIVESAAIRDIVEASVYSEYVLPKIYVKIQYCIS 278 HV VRC+NC R+VPKDKAIKRF VRNIVE+AAIRD+ EASVY EY LPK+Y+K+ YC+S Sbjct: 17 HVTFVRCSNCARAVPKDKAIKRFTVRNIVEAAAIRDLSEASVYQEYALPKLYIKVVYCVS 76 Query: 279 CAIHSHVVRVRSDQARRAREPP--AKFNRGAK 368 CAIH+H+VRVRS + RR R PP ++N+ K Sbjct: 77 CAIHAHIVRVRSREGRRNRLPPPRVRYNKDGK 108
>D38011:Os01g0823300 | Length = 133 Score = 122 bits (306), Expect = 1e-28 Identities = 55/87 (63%), Positives = 68/87 (78%) Frame = +3 Query: 99 HVCAVRCTNCGRSVPKDKAIKRFIVRNIVESAAIRDIVEASVYSEYVLPKIYVKIQYCIS 278 HV +RC+NC + PKDKAIKRF VRNIVE AAIRD+ EA V+ YVLPK+Y K+ +C+S Sbjct: 17 HVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVS 76 Query: 279 CAIHSHVVRVRSDQARRAREPPAKFNR 359 CAIH+H+VRVRS + RR R PP +F R Sbjct: 77 CAIHAHIVRVRSRENRRDRRPPERFRR 103
>AK121584:Os05g0477300 | Length = 136 Score = 122 bits (306), Expect = 1e-28 Identities = 55/87 (63%), Positives = 68/87 (78%) Frame = +3 Query: 99 HVCAVRCTNCGRSVPKDKAIKRFIVRNIVESAAIRDIVEASVYSEYVLPKIYVKIQYCIS 278 HV +RC+NC + PKDKAIKRF VRNIVE AAIRD+ EA V+ YVLPK+Y K+ +C+S Sbjct: 17 HVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVS 76 Query: 279 CAIHSHVVRVRSDQARRAREPPAKFNR 359 CAIH+H+VRVRS + RR R PP +F R Sbjct: 77 CAIHAHIVRVRSRENRRDRRPPERFRR 103
>AK119797:Os05g0477300 | Length = 136 Score = 122 bits (306), Expect = 1e-28 Identities = 55/87 (63%), Positives = 68/87 (78%) Frame = +3 Query: 99 HVCAVRCTNCGRSVPKDKAIKRFIVRNIVESAAIRDIVEASVYSEYVLPKIYVKIQYCIS 278 HV +RC+NC + PKDKAIKRF VRNIVE AAIRD+ EA V+ YVLPK+Y K+ +C+S Sbjct: 17 HVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVS 76 Query: 279 CAIHSHVVRVRSDQARRAREPPAKFNR 359 CAIH+H+VRVRS + RR R PP +F R Sbjct: 77 CAIHAHIVRVRSRENRRDRRPPERFRR 103
>AK119693:Os05g0477300 | Length = 136 Score = 122 bits (306), Expect = 1e-28 Identities = 55/87 (63%), Positives = 68/87 (78%) Frame = +3 Query: 99 HVCAVRCTNCGRSVPKDKAIKRFIVRNIVESAAIRDIVEASVYSEYVLPKIYVKIQYCIS 278 HV +RC+NC + PKDKAIKRF VRNIVE AAIRD+ EA V+ YVLPK+Y K+ +C+S Sbjct: 17 HVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVS 76 Query: 279 CAIHSHVVRVRSDQARRAREPPAKFNR 359 CAIH+H+VRVRS + RR R PP +F R Sbjct: 77 CAIHAHIVRVRSRENRRDRRPPERFRR 103
>AK119683:Os05g0477300 | Length = 136 Score = 122 bits (306), Expect = 1e-28 Identities = 55/87 (63%), Positives = 68/87 (78%) Frame = +3 Query: 99 HVCAVRCTNCGRSVPKDKAIKRFIVRNIVESAAIRDIVEASVYSEYVLPKIYVKIQYCIS 278 HV +RC+NC + PKDKAIKRF VRNIVE AAIRD+ EA V+ YVLPK+Y K+ +C+S Sbjct: 17 HVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVS 76 Query: 279 CAIHSHVVRVRSDQARRAREPPAKFNR 359 CAIH+H+VRVRS + RR R PP +F R Sbjct: 77 CAIHAHIVRVRSRENRRDRRPPERFRR 103
>AK098982:Os05g0477300 | Length = 136 Score = 122 bits (306), Expect = 1e-28 Identities = 55/87 (63%), Positives = 68/87 (78%) Frame = +3 Query: 99 HVCAVRCTNCGRSVPKDKAIKRFIVRNIVESAAIRDIVEASVYSEYVLPKIYVKIQYCIS 278 HV +RC+NC + PKDKAIKRF VRNIVE AAIRD+ EA V+ YVLPK+Y K+ +C+S Sbjct: 17 HVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVS 76 Query: 279 CAIHSHVVRVRSDQARRAREPPAKFNR 359 CAIH+H+VRVRS + RR R PP +F R Sbjct: 77 CAIHAHIVRVRSRENRRDRRPPERFRR 103
>AK061933:Os05g0477300 | Length = 136 Score = 122 bits (306), Expect = 1e-28 Identities = 55/87 (63%), Positives = 68/87 (78%) Frame = +3 Query: 99 HVCAVRCTNCGRSVPKDKAIKRFIVRNIVESAAIRDIVEASVYSEYVLPKIYVKIQYCIS 278 HV +RC+NC + PKDKAIKRF VRNIVE AAIRD+ EA V+ YVLPK+Y K+ +C+S Sbjct: 17 HVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVS 76 Query: 279 CAIHSHVVRVRSDQARRAREPPAKFNR 359 CAIH+H+VRVRS + RR R PP +F R Sbjct: 77 CAIHAHIVRVRSRENRRDRRPPERFRR 103
>AK062822: | Length = 110 Score = 89.0 bits (219), Expect = 1e-18 Identities = 42/77 (54%), Positives = 60/77 (77%), Gaps = 2/77 (2%) Frame = +3 Query: 111 VRCTNCGRSVPKDKAIKRFIVRNIVESAAIRDIVEAS-VYSE-YVLPKIYVKIQYCISCA 284 + C NCGR PKDKA+KRF+VRN+++ A+ RD+ E+S +YS+ + LPK+Y+K +YCI+CA Sbjct: 21 MHCFNCGRLCPKDKAVKRFVVRNMLDQASARDVAESSPIYSQGFPLPKLYMKQRYCIACA 80 Query: 285 IHSHVVRVRSDQARRAR 335 IHS VVR R+ R+ R Sbjct: 81 IHSRVVRGRAVVDRKIR 97
>AK109021:Os03g0816200 | Length = 61 Score = 32.0 bits (71), Expect = 0.21 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = +3 Query: 147 DKAIKRFIVRNIVESAAI 200 DKAI RF+VRNIVE AA+ Sbjct: 35 DKAINRFLVRNIVEQAAV 52
>AK121330:Os11g0578500 | Length = 624 Score = 28.1 bits (61), Expect = 3.0 Identities = 19/71 (26%), Positives = 32/71 (45%) Frame = +3 Query: 99 HVCAVRCTNCGRSVPKDKAIKRFIVRNIVESAAIRDIVEASVYSEYVLPKIYVKIQYCIS 278 H+CA G VPK +K V+N+ +A + A S +L K + + S Sbjct: 262 HICAFDNDKPGTLVPKSSDLKSISVKNLTRESAPAEENAAESSSLQILGKRKLYVTSDSS 321 Query: 279 CAIHSHVVRVR 311 ++S++ R R Sbjct: 322 HGMNSNIKRQR 332
>AK062108: | Length = 401 Score = 26.6 bits (57), Expect = 8.7 Identities = 9/30 (30%), Positives = 19/30 (63%) Frame = -3 Query: 416 LCTSYALNMQKNLLLSLGTSVELSWRLSGT 327 +C YA ++ +N+L G +++ W ++GT Sbjct: 172 ICPHYAEHVWRNILRKEGFAIKAGWPIAGT 201
>AK100624:Os09g0503400 | Length = 1029 Score = 26.6 bits (57), Expect = 8.7 Identities = 9/30 (30%), Positives = 19/30 (63%) Frame = -3 Query: 416 LCTSYALNMQKNLLLSLGTSVELSWRLSGT 327 +C YA ++ +N+L G +++ W ++GT Sbjct: 866 ICPHYAEHVWRNILRKEGFAIKAGWPIAGT 895
>AK099796:Os09g0503400 | Length = 1029 Score = 26.6 bits (57), Expect = 8.7 Identities = 9/30 (30%), Positives = 19/30 (63%) Frame = -3 Query: 416 LCTSYALNMQKNLLLSLGTSVELSWRLSGT 327 +C YA ++ +N+L G +++ W ++GT Sbjct: 866 ICPHYAEHVWRNILRKEGFAIKAGWPIAGT 895 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 10,098,897 Number of extensions: 175499 Number of successful extensions: 397 Number of sequences better than 10.0: 14 Number of HSP's gapped: 396 Number of HSP's successfully gapped: 14 Length of query: 159 Length of database: 15,399,855 Length adjustment: 92 Effective length of query: 67 Effective length of database: 11,716,083 Effective search space: 784977561 Effective search space used: 784977561 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
