ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf47e14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK106594:Os07g0165000 30 1.5
2Os05g0148500:Os05g0148500 27 7.2
3AK107588:Os02g0828400 27 7.2

>AK106594:Os07g0165000 |
          Length = 377
 Score = 29.6 bits (65), Expect = 1.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 299 LKTKEETSFTVKCVP*DKATTMEKC 373
           LK KEETS T++C P ++    +KC
Sbjct: 336 LKVKEETSATIRCFPFEQPEGAKKC 360



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>Os05g0148500:Os05g0148500 |
          Length = 755

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 15/85 (17%)
 Frame = +1

Query: 154 SSRSLSAICAEIAELRTHSRQGM*SSAVNV---VTAFCTRSALVGLFNMKLAED------ 306
           S RS SA C EIA LR+ ++     S+V+     T    RS       M L+++      
Sbjct: 279 SRRSNSASCDEIAALRSEAKVANSVSSVSQRLKSTGSIVRSLHGATNRMVLSQEEMRFYK 338

Query: 307 ------KGRNFIHC*VCALRQSYYN 363
                 KG   IHC +   +Q Y++
Sbjct: 339 YDAKVKKGSKSIHCDIAEEKQEYWS 363



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>AK107588:Os02g0828400 |
          Length = 192

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 123 PYSFPSPMDPQQPEPVSYLCGDCGAENTLKTGDVIQCRECG 245
           P S PSP   +  EP +   G+     +L TG+V + RE G
Sbjct: 37  PPSSPSPSPHRSSEPAATAAGEAATTRSLATGEVNK-RESG 76


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 16,943,403
Number of extensions: 387820
Number of successful extensions: 985
Number of sequences better than 10.0: 3
Number of HSP's gapped: 984
Number of HSP's successfully gapped: 3
Length of query: 190
Length of database: 15,399,855
Length adjustment: 95
Effective length of query: 95
Effective length of database: 11,595,960
Effective search space: 1101616200
Effective search space used: 1101616200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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