ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf44i08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 226 4e-55
2dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic D... 226 4e-55
3ref|NM_001069940.1| Oryza sativa (japonica cultivar-group) Os09g... 222 6e-54
4dbj|AK068942.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 1e-51
5dbj|AK060628.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 8e-41
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 139 6e-29
7dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic D... 139 6e-29
8dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic D... 139 6e-29
9ref|NM_001068573.1| Oryza sativa (japonica cultivar-group) Os08g... 135 1e-27
10dbj|AK106668.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-27
11gb|AY111404.1| Zea mays CL29785_1 mRNA sequence 58 2e-04
12ref|NM_001071263.1| Oryza sativa (japonica cultivar-group) Os10g... 48 0.18
13gb|CP000110.1| Synechococcus sp. CC9605, complete genome 48 0.18
14gb|AC119416.15| Medicago truncatula clone mth2-31m16, complete s... 48 0.18
15gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.18
16dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.18
17dbj|AK070851.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.18
18dbj|AK061298.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.18
19ref|XM_978307.1| PREDICTED: Mus musculus leucine-rich repeats an... 46 0.72
20ref|XM_978269.1| PREDICTED: Mus musculus leucine-rich repeats an... 46 0.72
21ref|XM_204439.7| PREDICTED: Mus musculus leucine-rich repeats an... 46 0.72
22ref|XM_982423.1| PREDICTED: Mus musculus leucine-rich repeats an... 46 0.72
23gb|AC092898.15| Homo sapiens 3 BAC RP11-321A2 (Roswell Park Canc... 46 0.72
24emb|AL671981.12| Mouse DNA sequence from clone RP23-358P8 on chr... 46 0.72
25dbj|AB059239.1| Oryza sativa CAI1 mRNA for glycine rich protein,... 46 0.72
26ref|NM_001064633.1| Oryza sativa (japonica cultivar-group) Os06g... 44 2.9
27ref|NM_001052324.1| Oryza sativa (japonica cultivar-group) Os02g... 44 2.9
28gb|CP000442.1| Burkholderia cepacia AMMD chromosome 3, complete ... 44 2.9
29gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete ... 44 2.9
30ref|XM_520008.2| PREDICTED: Pan troglodytes plectin 1 (PLEC1), mRNA 44 2.9
31gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete s... 44 2.9
32gb|BC118525.1| Mus musculus myosin Vb, mRNA (cDNA clone MGC:1441... 44 2.9
33ref|XM_001088212.1| PREDICTED: Macaca mulatta similar to plectin... 44 2.9
34ref|NM_201600.2| Mus musculus myosin Vb (Myo5b), mRNA 44 2.9
35ref|NM_202726.1| Arabidopsis thaliana ATP binding / ATP-dependen... 44 2.9
36ref|NM_001035807.1| Arabidopsis thaliana ATP binding / ATP-depen... 44 2.9
37ref|NM_115713.2| Arabidopsis thaliana ATP binding / ATP-dependen... 44 2.9
38gb|AC107747.8| Mus musculus chromosome 15, clone RP23-303J2, com... 44 2.9
39ref|NM_201384.1| Homo sapiens plectin 1, intermediate filament b... 44 2.9
40ref|NM_201383.1| Homo sapiens plectin 1, intermediate filament b... 44 2.9
41ref|NM_201382.1| Homo sapiens plectin 1, intermediate filament b... 44 2.9
42ref|NM_201381.1| Homo sapiens plectin 1, intermediate filament b... 44 2.9
43gb|AY480047.1| Homo sapiens plectin 6 mRNA, complete cds 44 2.9
44ref|NM_201379.1| Homo sapiens plectin 1, intermediate filament b... 44 2.9
45ref|NM_201378.1| Homo sapiens plectin 1, intermediate filament b... 44 2.9
46ref|NM_000445.2| Homo sapiens plectin 1, intermediate filament b... 44 2.9
47ref|NM_136044.2| Drosophila melanogaster CG10333-RA (CG10333), mRNA 44 2.9
48gb|BC046444.1| Mus musculus myosin Vb, mRNA (cDNA clone IMAGE:36... 44 2.9
49gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, co... 44 2.9
50gb|AC107828.16| Mus musculus chromosome 18, clone RP23-213N4, co... 44 2.9
51emb|CR731992.2|CNS0GRR1 Tetraodon nigroviridis full-length cDNA 44 2.9
52emb|CR685469.2|CNS0FRUX Tetraodon nigroviridis full-length cDNA 44 2.9
53dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 2.9
54dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 2.9
55dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 2.9
56gb|U53204.1|HSU53204 Human plectin (PLEC1) mRNA, complete cds 44 2.9
57gb|U63610.1|HSPLEC1S3 Human plectin (PLEC1) gene, exons 3-32, an... 44 2.9
58emb|AL356294.28| Human DNA sequence from clone RP11-49F20 on chr... 44 2.9
59gb|AY129335.1| Mycobacteriophage Corndog, complete genome 44 2.9
60gb|AY088091.1| Arabidopsis thaliana clone 41181 mRNA, complete s... 44 2.9
61emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromosome 4,... 44 2.9
62emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, B... 44 2.9
63ref|NM_001031472.1| Gallus gallus splicing factor 3a, subunit 1,... 44 2.9
64emb|Z54367.1|HSPLECTIN H.sapiens gene for plectin 44 2.9
65dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic D... 44 2.9
66dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic D... 44 2.9
67emb|BX823918.1|CNS0A4PV Arabidopsis thaliana Full-length cDNA Co... 44 2.9
68dbj|AK069931.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 2.9
69gb|BC049511.1| Danio rerio splicing factor 3a, subunit 1, mRNA (... 44 2.9
70gb|BT021222.1| Drosophila melanogaster RH55640 full insert cDNA 44 2.9
71gb|AC007137.20|AC007137 Drosophila melanogaster, chromosome 2L, ... 44 2.9
72ref|NM_201380.2| Homo sapiens plectin 1, intermediate filament b... 44 2.9
73gb|AY104936.1| Zea mays PCO102838 mRNA sequence 44 2.9
74gb|AC148002.3| Mus musculus BAC clone RP23-478M1 from 18, comple... 44 2.9
75gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 44 2.9
76ref|NM_017083.1| Rattus norvegicus myosin 5B (Myo5b), mRNA >gi|1... 44 2.9
77dbj|D85170.1| Streptomyces mauvecolor DNA for pre-enomycin, comp... 44 2.9 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651
 Score =  226 bits (114), Expect = 4e-55
 Identities = 168/186 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1042     gggctcgacggcgtgggctgcgccggcacgcatccctcgccgccggggaggtgcgcgttc 1101
                |||||||||||| || |||||||||||||||||||||||||||||||||||  || ||||
Sbjct: 17480516 gggctcgacggcatgagctgcgccggcacgcatccctcgccgccggggaggctcgtgttc 17480457

                                                                            
Query: 1102     ttggccgaggagaagatgatggcctcctggtagatcccttgccggaagttgaccacctgc 1161
                ||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||
Sbjct: 17480456 ttggccgaggagaagattatggcctcctggtagagtccttgccggaaattgaccacctgc 17480397

                                                                            
Query: 1162     tcctccagccgcaccacctcctcctccagcaccgccacctccgcgagaagagccagcgtc 1221
                ||||| ||||  || ||||| || |||||||||||||||||||||||||| ||||| |||
Sbjct: 17480396 tcctcgagcctgacgacctcttcttccagcaccgccacctccgcgagaagcgccagtgtc 17480337

                      
Query: 1222     tgcgca 1227
                | ||||
Sbjct: 17480336 ttcgca 17480331



 Score =  145 bits (73), Expect = 1e-30
 Identities = 112/125 (89%)
 Strand = Plus / Minus

                                                                            
Query: 1303     actgacttgagacggcaggtacggggggaggcgaggcagcgcgcccagcggcctggtgaa 1362
                |||||||||||| ||||| ||||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 17480222 actgacttgagatggcagatacggcggcaggcgaggcagagcgccgagcggcctcgtgaa 17480163

                                                                            
Query: 1363     ggcccgctccagagctcggtggacgttctcctcgtgccgcagcttcttcttcagcttctc 1422
                 |||| ||| || ||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 17480162 cgccctctcgagggctcggtggacgttctcctcgtgcctcagcttcttcttcagcttgtc 17480103

                     
Query: 1423     cacct 1427
                |||||
Sbjct: 17480102 cacct 17480098



 Score =  105 bits (53), Expect = 9e-19
 Identities = 77/85 (90%)
 Strand = Plus / Minus

                                                                            
Query: 32       agctcacattcatcatgcacgagttgtagacgttgatccagaaggcgagcttctgctgat 91
                |||| ||||||||||||||||| ||||||| |||||||||||| || |||||||||||||
Sbjct: 17481514 agcttacattcatcatgcacgaattgtagatgttgatccagaatgccagcttctgctgat 17481455

                                         
Query: 92       gcgagagccccgccgggtcaaccga 116
                | |||||||||| | ||||||||||
Sbjct: 17481454 gggagagccccgtcaggtcaaccga 17481430



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                             
Query: 2369     cgccgccgccggcctccgagcccggccattcatctccgacgccgt 2413
                |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 17479163 cgccgccgccggcctccgagcccggccattcatctccggcgccgt 17479119



 Score = 75.8 bits (38), Expect = 8e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                            
Query: 497      gcccatctgcgagaagatggtcagcaggcagctcagcagctcctccgacagtctgttggg 556
                ||||||||||||||||||||  |||||||| |||| ||| |||||||||| |||||| ||
Sbjct: 17481053 gcccatctgcgagaagatggcgagcaggcatctcaacagttcctccgacaatctgttcgg 17480994

                          
Query: 557      cgcgctcgag 566
                | ||||||||
Sbjct: 17480993 cacgctcgag 17480984



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1524     tgctgcagcgcgagcttccgctctctcctcgactggattctgctcgccatgcctctggcc 1583
                |||||||| ||||||||||||||||||||||  ||||||||| |||  |||||| |||  
Sbjct: 17479996 tgctgcagtgcgagcttccgctctctcctcgcttggattctgttcgtgatgcctttggtg 17479937

                           
Query: 1584     gccgcgttggc 1594
                 ||||||||||
Sbjct: 17479936 accgcgttggc 17479926



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 594      tctgaattattgccggcagcgtctgcgacccttttacggtcaggcgccgtactgatcgtc 653
                ||||||||||||| | ||| |||||||| |||||||||||| ||| | || || ||||||
Sbjct: 17480965 tctgaattattgctgacagtgtctgcgagccttttacggtccggcactgtgctaatcgtc 17480906

                     
Query: 654      tgtgt 658
                |||||
Sbjct: 17480905 tgtgt 17480901
to top
>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0019B14
          Length = 127570

 Score =  226 bits (114), Expect = 4e-55
 Identities = 168/186 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1042  gggctcgacggcgtgggctgcgccggcacgcatccctcgccgccggggaggtgcgcgttc 1101
             |||||||||||| || |||||||||||||||||||||||||||||||||||  || ||||
Sbjct: 44694 gggctcgacggcatgagctgcgccggcacgcatccctcgccgccggggaggctcgtgttc 44635

                                                                         
Query: 1102  ttggccgaggagaagatgatggcctcctggtagatcccttgccggaagttgaccacctgc 1161
             ||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||
Sbjct: 44634 ttggccgaggagaagattatggcctcctggtagagtccttgccggaaattgaccacctgc 44575

                                                                         
Query: 1162  tcctccagccgcaccacctcctcctccagcaccgccacctccgcgagaagagccagcgtc 1221
             ||||| ||||  || ||||| || |||||||||||||||||||||||||| ||||| |||
Sbjct: 44574 tcctcgagcctgacgacctcttcttccagcaccgccacctccgcgagaagcgccagtgtc 44515

                   
Query: 1222  tgcgca 1227
             | ||||
Sbjct: 44514 ttcgca 44509



 Score =  145 bits (73), Expect = 1e-30
 Identities = 112/125 (89%)
 Strand = Plus / Minus

                                                                         
Query: 1303  actgacttgagacggcaggtacggggggaggcgaggcagcgcgcccagcggcctggtgaa 1362
             |||||||||||| ||||| ||||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 44400 actgacttgagatggcagatacggcggcaggcgaggcagagcgccgagcggcctcgtgaa 44341

                                                                         
Query: 1363  ggcccgctccagagctcggtggacgttctcctcgtgccgcagcttcttcttcagcttctc 1422
              |||| ||| || ||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 44340 cgccctctcgagggctcggtggacgttctcctcgtgcctcagcttcttcttcagcttgtc 44281

                  
Query: 1423  cacct 1427
             |||||
Sbjct: 44280 cacct 44276



 Score =  105 bits (53), Expect = 9e-19
 Identities = 77/85 (90%)
 Strand = Plus / Minus

                                                                         
Query: 32    agctcacattcatcatgcacgagttgtagacgttgatccagaaggcgagcttctgctgat 91
             |||| ||||||||||||||||| ||||||| |||||||||||| || |||||||||||||
Sbjct: 45692 agcttacattcatcatgcacgaattgtagatgttgatccagaatgccagcttctgctgat 45633

                                      
Query: 92    gcgagagccccgccgggtcaaccga 116
             | |||||||||| | ||||||||||
Sbjct: 45632 gggagagccccgtcaggtcaaccga 45608



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                          
Query: 2369  cgccgccgccggcctccgagcccggccattcatctccgacgccgt 2413
             |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 43341 cgccgccgccggcctccgagcccggccattcatctccggcgccgt 43297



 Score = 75.8 bits (38), Expect = 8e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                         
Query: 497   gcccatctgcgagaagatggtcagcaggcagctcagcagctcctccgacagtctgttggg 556
             ||||||||||||||||||||  |||||||| |||| ||| |||||||||| |||||| ||
Sbjct: 45231 gcccatctgcgagaagatggcgagcaggcatctcaacagttcctccgacaatctgttcgg 45172

                       
Query: 557   cgcgctcgag 566
             | ||||||||
Sbjct: 45171 cacgctcgag 45162



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1524  tgctgcagcgcgagcttccgctctctcctcgactggattctgctcgccatgcctctggcc 1583
             |||||||| ||||||||||||||||||||||  ||||||||| |||  |||||| |||  
Sbjct: 44174 tgctgcagtgcgagcttccgctctctcctcgcttggattctgttcgtgatgcctttggtg 44115

                        
Query: 1584  gccgcgttggc 1594
              ||||||||||
Sbjct: 44114 accgcgttggc 44104



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                         
Query: 594   tctgaattattgccggcagcgtctgcgacccttttacggtcaggcgccgtactgatcgtc 653
             ||||||||||||| | ||| |||||||| |||||||||||| ||| | || || ||||||
Sbjct: 45143 tctgaattattgctgacagtgtctgcgagccttttacggtccggcactgtgctaatcgtc 45084

                  
Query: 654   tgtgt 658
             |||||
Sbjct: 45083 tgtgt 45079
to top
>ref|NM_001069940.1| Oryza sativa (japonica cultivar-group) Os09g0463300 (Os09g0463300)
            mRNA, complete cds
          Length = 1975

 Score =  222 bits (112), Expect = 6e-54
 Identities = 160/176 (90%)
 Strand = Plus / Minus

                                                                        
Query: 1042 gggctcgacggcgtgggctgcgccggcacgcatccctcgccgccggggaggtgcgcgttc 1101
            |||||||||||| || |||||||||||||||||||||||||||||||||||  || ||||
Sbjct: 534  gggctcgacggcatgagctgcgccggcacgcatccctcgccgccggggaggctcgtgttc 475

                                                                        
Query: 1102 ttggccgaggagaagatgatggcctcctggtagatcccttgccggaagttgaccacctgc 1161
            ||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||
Sbjct: 474  ttggccgaggagaagattatggcctcctggtagagtccttgccggaaattgaccacctgc 415

                                                                    
Query: 1162 tcctccagccgcaccacctcctcctccagcaccgccacctccgcgagaagagccag 1217
            ||||| ||||  || ||||| || |||||||||||||||||||||||||| |||||
Sbjct: 414  tcctcgagcctgacgacctcttcttccagcaccgccacctccgcgagaagcgccag 359



 Score =  129 bits (65), Expect = 6e-26
 Identities = 104/117 (88%)
 Strand = Plus / Minus

                                                                        
Query: 1309 ttgagacggcaggtacggggggaggcgaggcagcgcgcccagcggcctggtgaaggcccg 1368
            |||||| ||||| ||||| || ||||||||||| ||||| |||||||| ||||| |||| 
Sbjct: 355  ttgagatggcagatacggcggcaggcgaggcagagcgccgagcggcctcgtgaacgccct 296

                                                                     
Query: 1369 ctccagagctcggtggacgttctcctcgtgccgcagcttcttcttcagcttctccac 1425
            ||| || ||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 295  ctcgagggctcggtggacgttctcctcgtgcctcagcttcttcttcagcttgtccac 239



 Score =  101 bits (51), Expect = 1e-17
 Identities = 72/79 (91%)
 Strand = Plus / Minus

                                                                        
Query: 38   cattcatcatgcacgagttgtagacgttgatccagaaggcgagcttctgctgatgcgaga 97
            |||||||||||||||| ||||||| |||||||||||| || |||||||||||||| ||||
Sbjct: 1274 cattcatcatgcacgaattgtagatgttgatccagaatgccagcttctgctgatgggaga 1215

                               
Query: 98   gccccgccgggtcaaccga 116
            |||||| | ||||||||||
Sbjct: 1214 gccccgtcaggtcaaccga 1196



 Score = 75.8 bits (38), Expect = 8e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 497 gcccatctgcgagaagatggtcagcaggcagctcagcagctcctccgacagtctgttggg 556
           ||||||||||||||||||||  |||||||| |||| ||| |||||||||| |||||| ||
Sbjct: 952 gcccatctgcgagaagatggcgagcaggcatctcaacagttcctccgacaatctgttcgg 893

                     
Query: 557 cgcgctcgag 566
           | ||||||||
Sbjct: 892 cacgctcgag 883



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                        
Query: 1524 tgctgcagcgcgagcttccgctctctcctcgactggattctgctcgccatgcctctggcc 1583
            |||||||| ||||||||||||||||||||||  ||||||||| |||  |||||| |||  
Sbjct: 234  tgctgcagtgcgagcttccgctctctcctcgcttggattctgttcgtgatgcctttggtg 175

                       
Query: 1584 gccgcgttggc 1594
             ||||||||||
Sbjct: 174  accgcgttggc 164



 Score = 52.0 bits (26), Expect = 0.012
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 594 tctgaattattgccggcagcgtctgcgacccttttacggtcaggcgccgtactgatcgtc 653
           ||||||||||||| | ||| |||||||| |||||||||||| ||| | || || ||||||
Sbjct: 864 tctgaattattgctgacagtgtctgcgagccttttacggtccggcactgtgctaatcgtc 805

             
Query: 654 tg 655
           ||
Sbjct: 804 tg 803
to top
>dbj|AK068942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170B09, full
            insert sequence
          Length = 1976

 Score =  214 bits (108), Expect = 1e-51
 Identities = 159/176 (90%)
 Strand = Plus / Minus

                                                                        
Query: 1042 gggctcgacggcgtgggctgcgccggcacgcatccctcgccgccggggaggtgcgcgttc 1101
            |||||||||||| || |||||||||||||||||||||||||||||||||||  || ||||
Sbjct: 535  gggctcgacggcatgagctgcgccggcacgcatccctcgccgccggggaggctcgtgttc 476

                                                                        
Query: 1102 ttggccgaggagaagatgatggcctcctggtagatcccttgccggaagttgaccacctgc 1161
            ||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||
Sbjct: 475  ttggccgaggagaagattatggcctcctggtagagtccttgccggaaattgaccacctgc 416

                                                                    
Query: 1162 tcctccagccgcaccacctcctcctccagcaccgccacctccgcgagaagagccag 1217
            ||||| ||||  || ||||| || ||| |||||||||||||||||||||| |||||
Sbjct: 415  tcctcgagcctgacgacctcttcttccggcaccgccacctccgcgagaagcgccag 360



 Score =  129 bits (65), Expect = 6e-26
 Identities = 104/117 (88%)
 Strand = Plus / Minus

                                                                        
Query: 1309 ttgagacggcaggtacggggggaggcgaggcagcgcgcccagcggcctggtgaaggcccg 1368
            |||||| ||||| ||||| || ||||||||||| ||||| |||||||| ||||| |||| 
Sbjct: 356  ttgagatggcagatacggcggcaggcgaggcagagcgccgagcggcctcgtgaacgccct 297

                                                                     
Query: 1369 ctccagagctcggtggacgttctcctcgtgccgcagcttcttcttcagcttctccac 1425
            ||| || ||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 296  ctcgagggctcggtggacgttctcctcgtgcctcagcttcttcttcagcttgtccac 240



 Score =  101 bits (51), Expect = 1e-17
 Identities = 72/79 (91%)
 Strand = Plus / Minus

                                                                        
Query: 38   cattcatcatgcacgagttgtagacgttgatccagaaggcgagcttctgctgatgcgaga 97
            |||||||||||||||| ||||||| |||||||||||| || |||||||||||||| ||||
Sbjct: 1275 cattcatcatgcacgaattgtagatgttgatccagaatgccagcttctgctgatgggaga 1216

                               
Query: 98   gccccgccgggtcaaccga 116
            |||||| | ||||||||||
Sbjct: 1215 gccccgtcaggtcaaccga 1197



 Score = 75.8 bits (38), Expect = 8e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 497 gcccatctgcgagaagatggtcagcaggcagctcagcagctcctccgacagtctgttggg 556
           ||||||||||||||||||||  |||||||| |||| ||| |||||||||| |||||| ||
Sbjct: 953 gcccatctgcgagaagatggcgagcaggcatctcaacagttcctccgacaatctgttcgg 894

                     
Query: 557 cgcgctcgag 566
           | ||||||||
Sbjct: 893 cacgctcgag 884



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                        
Query: 1524 tgctgcagcgcgagcttccgctctctcctcgactggattctgctcgccatgcctctggcc 1583
            |||||||| ||||||||||||||||||||||  ||||||||| |||  |||||| |||  
Sbjct: 235  tgctgcagtgcgagcttccgctctctcctcgcttggattctgttcgtgatgcctttggtg 176

                       
Query: 1584 gccgcgttggc 1594
             ||||||||||
Sbjct: 175  accgcgttggc 165



 Score = 52.0 bits (26), Expect = 0.012
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 594 tctgaattattgccggcagcgtctgcgacccttttacggtcaggcgccgtactgatcgtc 653
           ||||||||||||| | ||| |||||||| |||||||||||| ||| | || || ||||||
Sbjct: 865 tctgaattattgctgacagtgtctgcgagccttttacggtccggcactgtgctaatcgtc 806

             
Query: 654 tg 655
           ||
Sbjct: 805 tg 804
to top
>dbj|AK060628.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-H04, full
            insert sequence
          Length = 1597

 Score =  178 bits (90), Expect = 8e-41
 Identities = 120/130 (92%)
 Strand = Plus / Minus

                                                                        
Query: 1042 gggctcgacggcgtgggctgcgccggcacgcatccctcgccgccggggaggtgcgcgttc 1101
            |||||||||||| || |||||||||||||||||||||||||||||||||||  || ||||
Sbjct: 138  gggctcgacggcatgagctgcgccggcacgcatccctcgccgccggggaggctcgtgttc 79

                                                                        
Query: 1102 ttggccgaggagaagatgatggcctcctggtagatcccttgccggaagttgaccacctgc 1161
            ||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||
Sbjct: 78   ttggccgaggagaagattatggcctcctggtagagtccttgccggaaattgaccacctgc 19

                      
Query: 1162 tcctccagcc 1171
            ||||| ||||
Sbjct: 18   tcctcgagcc 9



 Score =  101 bits (51), Expect = 1e-17
 Identities = 72/79 (91%)
 Strand = Plus / Minus

                                                                       
Query: 38  cattcatcatgcacgagttgtagacgttgatccagaaggcgagcttctgctgatgcgaga 97
           |||||||||||||||| ||||||| |||||||||||| || |||||||||||||| ||||
Sbjct: 878 cattcatcatgcacgaattgtagatgttgatccagaatgccagcttctgctgatgggaga 819

                              
Query: 98  gccccgccgggtcaaccga 116
           |||||| | ||||||||||
Sbjct: 818 gccccgtcaggtcaaccga 800



 Score = 75.8 bits (38), Expect = 8e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 497 gcccatctgcgagaagatggtcagcaggcagctcagcagctcctccgacagtctgttggg 556
           ||||||||||||||||||||  |||||||| |||| ||| |||||||||| |||||| ||
Sbjct: 556 gcccatctgcgagaagatggcgagcaggcatctcaacagttcctccgacaatctgttcgg 497

                     
Query: 557 cgcgctcgag 566
           | ||||||||
Sbjct: 496 cacgctcgag 487



 Score = 52.0 bits (26), Expect = 0.012
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 594 tctgaattattgccggcagcgtctgcgacccttttacggtcaggcgccgtactgatcgtc 653
           ||||||||||||| | ||| |||||||| |||||||||||| ||| | || || ||||||
Sbjct: 468 tctgaattattgctgacagtgtctgcgagccttttacggtccggcactgtgctaatcgtc 409

             
Query: 654 tg 655
           ||
Sbjct: 408 tg 407
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  139 bits (70), Expect = 6e-29
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                            
Query: 1310     tgagacggcaggtacggggggaggcgaggcagcgcgcccagcggcctggtgaaggcccgc 1369
                ||||| |||||||| || || |||||||| || ||||| || ||||| |||||||| |||
Sbjct: 23440989 tgagaaggcaggtaaggtggaaggcgagggagagcgccgagtggcctcgtgaaggcgcgc 23440930

                                                                          
Query: 1370     tccagagctcggtggacgttctcctcgtgccgcagcttcttcttcagcttctccacct 1427
                |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 23440929 tccagagctcggtggacgttctcctcgtgccgcagcttcttcctcagcttgtccacct 23440872



 Score = 87.7 bits (44), Expect = 2e-13
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                            
Query: 1123     gcctcctggtagatcccttgccggaagttgaccacctgctcctccagccgcaccacctcc 1182
                ||||||| ||||| ||||||||||||| |||| ||||||||||| ||||| || ||||||
Sbjct: 23441213 gcctcctcgtagagcccttgccggaagctgacgacctgctcctcgagccggacgacctcc 23441154

                                                        
Query: 1183     tcctccagcaccgccacctccgcgagaagagccagcgtct 1222
                |||||||  ||||| ||||| ||||| ||  |||||||||
Sbjct: 23441153 tcctccaagaccgcgacctcggcgaggagctccagcgtct 23441114



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                            
Query: 32       agctcacattcatcatgcacgagttgtagacgttgatccagaaggcgagcttctgctgat 91
                |||| |||||||||||||| || ||||||  |||||||||||| || | |||||||||||
Sbjct: 23442194 agcttacattcatcatgcaggaattgtaggtgttgatccagaatgctaacttctgctgat 23442135

                 
Query: 92       g 92
                |
Sbjct: 23442134 g 23442134
to top
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0451G12
          Length = 142182

 Score =  139 bits (70), Expect = 6e-29
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1310   tgagacggcaggtacggggggaggcgaggcagcgcgcccagcggcctggtgaaggcccgc 1369
              ||||| |||||||| || || |||||||| || ||||| || ||||| |||||||| |||
Sbjct: 122826 tgagaaggcaggtaaggtggaaggcgagggagagcgccgagtggcctcgtgaaggcgcgc 122767

                                                                        
Query: 1370   tccagagctcggtggacgttctcctcgtgccgcagcttcttcttcagcttctccacct 1427
              |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 122766 tccagagctcggtggacgttctcctcgtgccgcagcttcttcctcagcttgtccacct 122709



 Score = 87.7 bits (44), Expect = 2e-13
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                          
Query: 1123   gcctcctggtagatcccttgccggaagttgaccacctgctcctccagccgcaccacctcc 1182
              ||||||| ||||| ||||||||||||| |||| ||||||||||| ||||| || ||||||
Sbjct: 123050 gcctcctcgtagagcccttgccggaagctgacgacctgctcctcgagccggacgacctcc 122991

                                                      
Query: 1183   tcctccagcaccgccacctccgcgagaagagccagcgtct 1222
              |||||||  ||||| ||||| ||||| ||  |||||||||
Sbjct: 122990 tcctccaagaccgcgacctcggcgaggagctccagcgtct 122951



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                          
Query: 32     agctcacattcatcatgcacgagttgtagacgttgatccagaaggcgagcttctgctgat 91
              |||| |||||||||||||| || ||||||  |||||||||||| || | |||||||||||
Sbjct: 124031 agcttacattcatcatgcaggaattgtaggtgttgatccagaatgctaacttctgctgat 123972

               
Query: 92     g 92
              |
Sbjct: 123971 g 123971
to top
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1111_E05
          Length = 126978

 Score =  139 bits (70), Expect = 6e-29
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                         
Query: 1310  tgagacggcaggtacggggggaggcgaggcagcgcgcccagcggcctggtgaaggcccgc 1369
             ||||| |||||||| || || |||||||| || ||||| || ||||| |||||||| |||
Sbjct: 32404 tgagaaggcaggtaaggtggaaggcgagggagagcgccgagtggcctcgtgaaggcgcgc 32345

                                                                       
Query: 1370  tccagagctcggtggacgttctcctcgtgccgcagcttcttcttcagcttctccacct 1427
             |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 32344 tccagagctcggtggacgttctcctcgtgccgcagcttcttcctcagcttgtccacct 32287



 Score = 87.7 bits (44), Expect = 2e-13
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                         
Query: 1123  gcctcctggtagatcccttgccggaagttgaccacctgctcctccagccgcaccacctcc 1182
             ||||||| ||||| ||||||||||||| |||| ||||||||||| ||||| || ||||||
Sbjct: 32628 gcctcctcgtagagcccttgccggaagctgacgacctgctcctcgagccggacgacctcc 32569

                                                     
Query: 1183  tcctccagcaccgccacctccgcgagaagagccagcgtct 1222
             |||||||  ||||| ||||| ||||| ||  |||||||||
Sbjct: 32568 tcctccaagaccgcgacctcggcgaggagctccagcgtct 32529



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                         
Query: 32    agctcacattcatcatgcacgagttgtagacgttgatccagaaggcgagcttctgctgat 91
             |||| |||||||||||||| || ||||||  |||||||||||| || | |||||||||||
Sbjct: 33609 agcttacattcatcatgcaggaattgtaggtgttgatccagaatgctaacttctgctgat 33550

              
Query: 92    g 92
             |
Sbjct: 33549 g 33549
to top
>ref|NM_001068573.1| Oryza sativa (japonica cultivar-group) Os08g0476000 (Os08g0476000)
            mRNA, complete cds
          Length = 1544

 Score =  135 bits (68), Expect = 1e-27
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1310 tgagacggcaggtacggggggaggcgaggcagcgcgcccagcggcctggtgaaggcccgc 1369
            ||||| |||||||| || || |||||||| || ||||| || ||||| |||||||| |||
Sbjct: 401  tgagaaggcaggtaaggtggaaggcgagggagagcgccgagtggcctcgtgaaggcgcgc 342

                                                                    
Query: 1370 tccagagctcggtggacgttctcctcgtgccgcagcttcttcttcagcttctccac 1425
            |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 341  tccagagctcggtggacgttctcctcgtgccgcagcttcttcctcagcttgtccac 286



 Score = 89.7 bits (45), Expect = 5e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1123 gcctcctggtagatcccttgccggaagttgaccacctgctcctccagccgcaccacctcc 1182
            ||||||| ||||| ||||||||||||| |||| ||||||||||| ||||| || ||||||
Sbjct: 500  gcctcctcgtagagcccttgccggaagctgacgacctgctcctcgagccggacgacctcc 441

                                                     
Query: 1183 tcctccagcaccgccacctccgcgagaagagccagcgtctg 1223
            |||||||  ||||| ||||| ||||| ||  ||||||||||
Sbjct: 440  tcctccaagaccgcgacctcggcgaggagctccagcgtctg 400



 Score = 54.0 bits (27), Expect = 0.003
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 38   cattcatcatgcacgagttgtagacgttgatccagaaggcgagcttctgctgatg 92
            ||||||||||||| || ||||||  |||||||||||| || | ||||||||||||
Sbjct: 1273 cattcatcatgcaggaattgtaggtgttgatccagaatgctaacttctgctgatg 1219
to top
>dbj|AK106668.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-H09, full
            insert sequence
          Length = 1560

 Score =  135 bits (68), Expect = 1e-27
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1310 tgagacggcaggtacggggggaggcgaggcagcgcgcccagcggcctggtgaaggcccgc 1369
            ||||| |||||||| || || |||||||| || ||||| || ||||| |||||||| |||
Sbjct: 401  tgagaaggcaggtaaggtggaaggcgagggagagcgccgagtggcctcgtgaaggcgcgc 342

                                                                    
Query: 1370 tccagagctcggtggacgttctcctcgtgccgcagcttcttcttcagcttctccac 1425
            |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 341  tccagagctcggtggacgttctcctcgtgccgcagcttcttcctcagcttgtccac 286



 Score = 89.7 bits (45), Expect = 5e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1123 gcctcctggtagatcccttgccggaagttgaccacctgctcctccagccgcaccacctcc 1182
            ||||||| ||||| ||||||||||||| |||| ||||||||||| ||||| || ||||||
Sbjct: 500  gcctcctcgtagagcccttgccggaagctgacgacctgctcctcgagccggacgacctcc 441

                                                     
Query: 1183 tcctccagcaccgccacctccgcgagaagagccagcgtctg 1223
            |||||||  ||||| ||||| ||||| ||  ||||||||||
Sbjct: 440  tcctccaagaccgcgacctcggcgaggagctccagcgtctg 400



 Score = 54.0 bits (27), Expect = 0.003
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 38   cattcatcatgcacgagttgtagacgttgatccagaaggcgagcttctgctgatg 92
            ||||||||||||| || ||||||  |||||||||||| || | ||||||||||||
Sbjct: 1273 cattcatcatgcaggaattgtaggtgttgatccagaatgctaacttctgctgatg 1219
to top
>gb|AY111404.1| Zea mays CL29785_1 mRNA sequence
          Length = 563

 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 1373 agagctcggtggacgttctcctcgtgccgcagcttcttcttcagcttctccac 1425
            ||||||| ||||||||||| |||||||| || ||||||| ||||||| |||||
Sbjct: 311  agagctcagtggacgttcttctcgtgccacaacttcttcctcagcttgtccac 363
to top
>ref|NM_001071263.1| Oryza sativa (japonica cultivar-group) Os10g0450800 (Os10g0450800)
            mRNA, complete cds
          Length = 902

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 1174 accacctcctcctccagcaccgccacct 1201
            |||||||||||||||| |||||||||||
Sbjct: 180  accacctcctcctccaccaccgccacct 153
to top
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 1178   cctcctcctccagcaccgccacct 1201
              ||||||||||||||||||||||||
Sbjct: 559156 cctcctcctccagcaccgccacct 559179
to top
>gb|AC119416.15| Medicago truncatula clone mth2-31m16, complete sequence
          Length = 120889

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 1173  caccacctcctcctccagcaccgccacc 1200
             ||||||||||||||||| ||||||||||
Sbjct: 64778 caccacctcctcctccaccaccgccacc 64751
to top
>gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0068N06,
             complete sequence
          Length = 174019

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 1174  accacctcctcctccagcaccgccacct 1201
             |||||||||||||||| |||||||||||
Sbjct: 84109 accacctcctcctccaccaccgccacct 84136
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 1174     accacctcctcctccagcaccgccacct 1201
                |||||||||||||||| |||||||||||
Sbjct: 15912585 accacctcctcctccaccaccgccacct 15912612
to top
>dbj|AK070851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065B06, full
            insert sequence
          Length = 568

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 1174 accacctcctcctccagcaccgccacct 1201
            |||||||||||||||| |||||||||||
Sbjct: 181  accacctcctcctccaccaccgccacct 154
to top
>dbj|AK061298.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E04, full
            insert sequence
          Length = 986

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 1174 accacctcctcctccagcaccgccacct 1201
            |||||||||||||||| |||||||||||
Sbjct: 264  accacctcctcctccaccaccgccacct 237
to top
>ref|XM_978307.1| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 2, transcript variant 2 (Lrch2),
            mRNA
          Length = 3550

 Score = 46.1 bits (23), Expect = 0.72
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 1154 ccacctgctcctccagccgcaccacctcctcctccagcaccgccacc 1200
            |||||| |||||||| |  |||||||||||||||||||  |||||||
Sbjct: 150  ccacctcctcctccaccaccaccacctcctcctccagccgcgccacc 104
to top
>ref|XM_978269.1| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 2, transcript variant 1 (Lrch2),
            mRNA
          Length = 3616

 Score = 46.1 bits (23), Expect = 0.72
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 1154 ccacctgctcctccagccgcaccacctcctcctccagcaccgccacc 1200
            |||||| |||||||| |  |||||||||||||||||||  |||||||
Sbjct: 150  ccacctcctcctccaccaccaccacctcctcctccagccgcgccacc 104
to top
>ref|XM_204439.7| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 2, transcript variant 1 (Lrch2),
            mRNA
          Length = 3616

 Score = 46.1 bits (23), Expect = 0.72
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 1154 ccacctgctcctccagccgcaccacctcctcctccagcaccgccacc 1200
            |||||| |||||||| |  |||||||||||||||||||  |||||||
Sbjct: 150  ccacctcctcctccaccaccaccacctcctcctccagccgcgccacc 104
to top
>ref|XM_982423.1| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 2 (Lrch2), mRNA
          Length = 3109

 Score = 46.1 bits (23), Expect = 0.72
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 1154 ccacctgctcctccagccgcaccacctcctcctccagcaccgccacc 1200
            |||||| |||||||| |  |||||||||||||||||||  |||||||
Sbjct: 194  ccacctcctcctccaccaccaccacctcctcctccagccgcgccacc 148
to top
>gb|AC092898.15| Homo sapiens 3 BAC RP11-321A2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 122934

 Score = 46.1 bits (23), Expect = 0.72
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 1153  accacctgctcctccagccgcaccacctcctcctccagcaccgccacctcc 1203
             ||||||| |||||||| |  ||||||||||||||||| || | ||||||||
Sbjct: 44362 accacctcctcctccaccatcaccacctcctcctccaccatcaccacctcc 44312



 Score = 44.1 bits (22), Expect = 2.9
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 1173  caccacctcctcctccagcaccgccacctc 1202
             ||||||||||||||||| |||| |||||||
Sbjct: 42816 caccacctcctcctccatcaccaccacctc 42787
to top
>emb|AL671981.12| Mouse DNA sequence from clone RP23-358P8 on chromosome X, complete
            sequence
          Length = 167604

 Score = 46.1 bits (23), Expect = 0.72
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 1154 ccacctgctcctccagccgcaccacctcctcctccagcaccgccacc 1200
            |||||| |||||||| |  |||||||||||||||||||  |||||||
Sbjct: 3591 ccacctcctcctccaccaccaccacctcctcctccagccgcgccacc 3637
to top
>dbj|AB059239.1| Oryza sativa CAI1 mRNA for glycine rich protein, complete cds
          Length = 947

 Score = 46.1 bits (23), Expect = 0.72
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 1173 caccacctcctcctccagcaccgccacctcc 1203
            ||||||| ||||||||| |||||||||||||
Sbjct: 267  caccaccacctcctccaccaccgccacctcc 237
to top
>ref|NM_001064633.1| Oryza sativa (japonica cultivar-group) Os06g0622400 (Os06g0622400)
            mRNA, complete cds
          Length = 966

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1175 ccacctcctcctccagcaccgccacc 1200
            ||||||||||||||| ||||||||||
Sbjct: 404  ccacctcctcctccaccaccgccacc 379
to top
>ref|NM_001052324.1| Oryza sativa (japonica cultivar-group) Os02g0131200 (Os02g0131200)
            mRNA, complete cds
          Length = 2194

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 1176 cacctcctcctccagcaccgccacctccgc 1205
            |||| |||||||||||||||||||| ||||
Sbjct: 270  caccccctcctccagcaccgccacccccgc 241
to top
>gb|CP000442.1| Burkholderia cepacia AMMD chromosome 3, complete sequence
          Length = 1281472

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1583  cgccgcgttggcggtcggtgcc 1604
             ||||||||||||||||||||||
Sbjct: 53625 cgccgcgttggcggtcggtgcc 53646
to top
>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence
          Length = 3556545

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 2340    tcgcccttcggggcggccttcgcgcc 2365
               |||||||||| |||||||||||||||
Sbjct: 3500970 tcgcccttcgcggcggccttcgcgcc 3500945
to top
>ref|XM_520008.2| PREDICTED: Pan troglodytes plectin 1 (PLEC1), mRNA
          Length = 14212

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4314 ctcctcccgccgcaccacctcctcct 4289
to top
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence
          Length = 23011544

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 1170     ccgcaccacctcctcctccagcaccg 1195
                |||||||||||||||||||| |||||
Sbjct: 18607266 ccgcaccacctcctcctccaccaccg 18607241
to top
>gb|BC118525.1| Mus musculus myosin Vb, mRNA (cDNA clone MGC:144199 IMAGE:40099275),
            complete cds
          Length = 5774

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1402 cagcttcttcttcagcttctccacct 1427
            ||||| ||||||||||||||||||||
Sbjct: 3056 cagctccttcttcagcttctccacct 3031
to top
>ref|XM_001088212.1| PREDICTED: Macaca mulatta similar to plectin 1 isoform 3 (LOC699517),
            mRNA
          Length = 15237

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4795 ctcctcccgccgcaccacctcctcct 4770
to top
>ref|NM_201600.2| Mus musculus myosin Vb (Myo5b), mRNA
          Length = 6647

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1402 cagcttcttcttcagcttctccacct 1427
            ||||| ||||||||||||||||||||
Sbjct: 3063 cagctccttcttcagcttctccacct 3038
to top
>ref|NM_202726.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/
            nucleic acid binding (AT3G58510) mRNA, complete cds
          Length = 2508

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1173 caccacctcctcctccagcacc 1194
            ||||||||||||||||||||||
Sbjct: 606  caccacctcctcctccagcacc 585
to top
>ref|NM_001035807.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/
            nucleic acid binding (AT3G58510) mRNA, complete cds
          Length = 2438

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1173 caccacctcctcctccagcacc 1194
            ||||||||||||||||||||||
Sbjct: 536  caccacctcctcctccagcacc 515
to top
>ref|NM_115713.2| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/
            nucleic acid binding (AT3G58510) mRNA, complete cds
          Length = 2348

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1173 caccacctcctcctccagcacc 1194
            ||||||||||||||||||||||
Sbjct: 446  caccacctcctcctccagcacc 425
to top
>gb|AC107747.8| Mus musculus chromosome 15, clone RP23-303J2, complete sequence
          Length = 199506

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 514   tggtcagcaggcagctcagcag 535
             ||||||||||||||||||||||
Sbjct: 98293 tggtcagcaggcagctcagcag 98272
to top
>ref|NM_201384.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 11, mRNA
 gb|AY480051.1| Homo sapiens plectin 11 mRNA, complete cds
          Length = 14797

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4347 ctcctcccgccgcaccacctcctcct 4322
to top
>ref|NM_201383.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 10, mRNA
 gb|AY480050.1| Homo sapiens plectin 10 mRNA, complete cds
          Length = 14689

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4239 ctcctcccgccgcaccacctcctcct 4214
to top
>ref|NM_201382.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 8, mRNA
 gb|AY480049.1| Homo sapiens plectin 8 mRNA, complete cds
          Length = 14675

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4225 ctcctcccgccgcaccacctcctcct 4200
to top
>ref|NM_201381.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 7, mRNA
 gb|AY480048.1| Homo sapiens plectin 7 mRNA, complete cds
          Length = 14646

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4196 ctcctcccgccgcaccacctcctcct 4171
to top
>gb|AY480047.1| Homo sapiens plectin 6 mRNA, complete cds
          Length = 15249

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4799 ctcctcccgccgcaccacctcctcct 4774
to top
>ref|NM_201379.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 3, mRNA
 gb|AY480046.1| Homo sapiens plectin 3 mRNA, complete cds
          Length = 14751

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4301 ctcctcccgccgcaccacctcctcct 4276
to top
>ref|NM_201378.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 2, mRNA
 gb|AY480045.1| Homo sapiens plectin 2 mRNA, complete cds
          Length = 14626

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4176 ctcctcccgccgcaccacctcctcct 4151
to top
>ref|NM_000445.2| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 1, mRNA
 gb|AY480044.1| Homo sapiens plectin 1 mRNA, complete cds
          Length = 14755

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4305 ctcctcccgccgcaccacctcctcct 4280
to top
>ref|NM_136044.2| Drosophila melanogaster CG10333-RA (CG10333), mRNA
          Length = 2663

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1170 ccgcaccacctcctcctccagcaccg 1195
            |||||||||||||||||||| |||||
Sbjct: 371  ccgcaccacctcctcctccaccaccg 346
to top
>gb|BC046444.1| Mus musculus myosin Vb, mRNA (cDNA clone IMAGE:3600554), partial cds
          Length = 4703

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1402 cagcttcttcttcagcttctccacct 1427
            ||||| ||||||||||||||||||||
Sbjct: 1772 cagctccttcttcagcttctccacct 1747
to top
>gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, complete sequence
          Length = 215342

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 1161   ctcctccagccgcaccacctcctcct 1186
              ||||||| ||||||||||||||||||
Sbjct: 146184 ctcctcccgccgcaccacctcctcct 146159
to top
>gb|AC107828.16| Mus musculus chromosome 18, clone RP23-213N4, complete sequence
          Length = 212092

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 439    gctgctgctgctcctcgtcctgctca 464
              |||||||||||||||| |||||||||
Sbjct: 105566 gctgctgctgctcctcctcctgctca 105541
to top
>emb|CR731992.2|CNS0GRR1 Tetraodon nigroviridis full-length cDNA
          Length = 1233

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1171 cgcaccacctcctcctccagca 1192
            ||||||||||||||||||||||
Sbjct: 456  cgcaccacctcctcctccagca 477
to top
>emb|CR685469.2|CNS0FRUX Tetraodon nigroviridis full-length cDNA
          Length = 806

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1171 cgcaccacctcctcctccagca 1192
            ||||||||||||||||||||||
Sbjct: 26   cgcaccacctcctcctccagca 47
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 1175     ccacctcctcctccagcaccgccacc 1200
                ||||||||||||||| ||||||||||
Sbjct: 24637367 ccacctcctcctccaccaccgccacc 24637392
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 2355     gccttcgcgccgtgcgccgccgccgg 2380
                ||||||||||||| ||||||||||||
Sbjct: 12534146 gccttcgcgccgtccgccgccgccgg 12534171
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 1176    cacctcctcctccagcaccgccacctccgc 1205
               |||| |||||||||||||||||||| ||||
Sbjct: 1636503 caccccctcctccagcaccgccacccccgc 1636532
to top
>gb|U53204.1|HSU53204 Human plectin (PLEC1) mRNA, complete cds
          Length = 14800

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4350 ctcctcccgccgcaccacctcctcct 4325
to top
>gb|U63610.1|HSPLEC1S3 Human plectin (PLEC1) gene, exons 3-32, and complete cds
          Length = 22693

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1161  ctcctccagccgcaccacctcctcct 1186
             ||||||| ||||||||||||||||||
Sbjct: 12076 ctcctcccgccgcaccacctcctcct 12051
to top
>emb|AL356294.28| Human DNA sequence from clone RP11-49F20 on chromosome 13 Contains a
              glycogenin (GYG) pseudogene, complete sequence
          Length = 135345

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2894   gtatggattcgtatttacaact 2915
              ||||||||||||||||||||||
Sbjct: 119589 gtatggattcgtatttacaact 119610
to top
>gb|AY129335.1| Mycobacteriophage Corndog, complete genome
          Length = 69777

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1145  ggaagttgaccacctgctcctc 1166
             ||||||||||||||||||||||
Sbjct: 12954 ggaagttgaccacctgctcctc 12933
to top
>gb|AY088091.1| Arabidopsis thaliana clone 41181 mRNA, complete sequence
          Length = 2348

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1173 caccacctcctcctccagcacc 1194
            ||||||||||||||||||||||
Sbjct: 446  caccacctcctcctccagcacc 425
to top
>emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065J03,
             complete sequence
          Length = 144146

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 2355  gccttcgcgccgtgcgccgccgccgg 2380
             ||||||||||||| ||||||||||||
Sbjct: 60079 gccttcgcgccgtccgccgccgccgg 60054
to top
>emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22
          Length = 94239

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1173  caccacctcctcctccagcacc 1194
             ||||||||||||||||||||||
Sbjct: 34376 caccacctcctcctccagcacc 34355
to top
>ref|NM_001031472.1| Gallus gallus splicing factor 3a, subunit 1, 120kDa (SF3A1), mRNA
 emb|AJ719500.1| Gallus gallus mRNA for hypothetical protein, clone 2o2
          Length = 3125

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1620 ttcctctgctccttctgcatca 1641
            ||||||||||||||||||||||
Sbjct: 644  ttcctctgctccttctgcatca 623
to top
>emb|Z54367.1|HSPLECTIN H.sapiens gene for plectin
          Length = 14189

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4629 ctcctcccgccgcaccacctcctcct 4604
to top
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1007_D04
          Length = 125503

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 1176  cacctcctcctccagcaccgccacctccgc 1205
             |||| |||||||||||||||||||| ||||
Sbjct: 73606 caccccctcctccagcaccgccacccccgc 73635
to top
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0040H10
          Length = 173301

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 1175   ccacctcctcctccagcaccgccacc 1200
              ||||||||||||||| ||||||||||
Sbjct: 120560 ccacctcctcctccaccaccgccacc 120585
to top
>emb|BX823918.1|CNS0A4PV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS92ZB07 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2476

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1173 caccacctcctcctccagcacc 1194
            ||||||||||||||||||||||
Sbjct: 609  caccacctcctcctccagcacc 588
to top
>dbj|AK069931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035J06, full
            insert sequence
          Length = 2195

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 1176 cacctcctcctccagcaccgccacctccgc 1205
            |||| |||||||||||||||||||| ||||
Sbjct: 271  caccccctcctccagcaccgccacccccgc 242
to top
>gb|BC049511.1| Danio rerio splicing factor 3a, subunit 1, mRNA (cDNA clone
            IMAGE:5915856)
          Length = 1897

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1620 ttcctctgctccttctgcatca 1641
            ||||||||||||||||||||||
Sbjct: 584  ttcctctgctccttctgcatca 563
to top
>gb|BT021222.1| Drosophila melanogaster RH55640 full insert cDNA
          Length = 2670

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1170 ccgcaccacctcctcctccagcaccg 1195
            |||||||||||||||||||| |||||
Sbjct: 371  ccgcaccacctcctcctccaccaccg 346
to top
>gb|AC007137.20|AC007137 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone
             BACR25C02, complete sequence
          Length = 171454

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1170  ccgcaccacctcctcctccagcaccg 1195
             |||||||||||||||||||| |||||
Sbjct: 44006 ccgcaccacctcctcctccaccaccg 43981
to top
>ref|NM_201380.2| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 6, mRNA
          Length = 15249

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1161 ctcctccagccgcaccacctcctcct 1186
            ||||||| ||||||||||||||||||
Sbjct: 4799 ctcctcccgccgcaccacctcctcct 4774
to top
>gb|AY104936.1| Zea mays PCO102838 mRNA sequence
          Length = 710

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2142 gggcggtggctaccgagggcgaccgg 2167
            ||||||||||| ||||||||||||||
Sbjct: 66   gggcggtggctcccgagggcgaccgg 91
to top
>gb|AC148002.3| Mus musculus BAC clone RP23-478M1 from 18, complete sequence
          Length = 200845

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1402  cagcttcttcttcagcttctccacct 1427
             ||||| ||||||||||||||||||||
Sbjct: 68965 cagctccttcttcagcttctccacct 68940
to top
>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1173   caccacctcctcctccagcacc 1194
              ||||||||||||||||||||||
Sbjct: 295447 caccacctcctcctccagcacc 295426
to top
>ref|NM_017083.1| Rattus norvegicus myosin 5B (Myo5b), mRNA
 gb|U60416.1|RNU60416 Rattus norvegicus myr 6 myosin heavy chain mRNA, complete cds
          Length = 6075

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1402 cagcttcttcttcagcttctccacct 1427
            ||||| ||||||||||||||||||||
Sbjct: 3068 cagctccttcttcagcttctccacct 3043
to top
>dbj|D85170.1| Streptomyces mauvecolor DNA for pre-enomycin, complete cds
          Length = 573

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1579 tggccgccgcgttggcggtcgg 1600
            ||||||||||||||||||||||
Sbjct: 116  tggccgccgcgttggcggtcgg 137


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 430,196,975
Number of extensions: 24144865
Number of successful extensions: 159926
Number of sequences better than 10.0: 77
Number of HSP's gapped: 159926
Number of HSP's successfully gapped: 113
Length of query: 2941
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2918
Effective length of database: 18,503,978,556
Effective search space: 53994609426408
Effective search space used: 53994609426408
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
to top